data_4RYJ # _entry.id 4RYJ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI RCSB RCSB087954 ? ? PDB 4RYJ pdb_00004ryj 10.2210/pdb4ryj/pdb WWPDB D_1000087954 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-02-11 2 'Structure model' 1 1 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4RYJ _pdbx_database_status.recvd_initial_deposition_date 2014-12-15 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4RYI 'The same protein BcTSPO, similar dimer state' unspecified PDB 4RYM . unspecified PDB 4RYN . unspecified PDB 4RYO . unspecified TargetTrack NYCOMPS-GO.14070 . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Guo, Y.' 1 'Liu, Q.' 2 'Hendrickson, W.A.' 3 'New York Consortium on Membrane Protein Structure (NYCOMPS)' 4 # _citation.id primary _citation.title 'Protein structure. Structure and activity of tryptophan-rich TSPO proteins.' _citation.journal_abbrev Science _citation.journal_volume 347 _citation.page_first 551 _citation.page_last 555 _citation.year 2015 _citation.journal_id_ASTM SCIEAS _citation.country US _citation.journal_id_ISSN 0036-8075 _citation.journal_id_CSD 0038 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 25635100 _citation.pdbx_database_id_DOI 10.1126/science.aaa1534 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Guo, Y.' 1 ? primary 'Kalathur, R.C.' 2 ? primary 'Liu, Q.' 3 ? primary 'Kloss, B.' 4 ? primary 'Bruni, R.' 5 ? primary 'Ginter, C.' 6 ? primary 'Kloppmann, E.' 7 ? primary 'Rost, B.' 8 ? primary 'Hendrickson, W.A.' 9 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Integral membrane protein' _entity.formula_weight 21496.965 _entity.pdbx_number_of_molecules 2 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MDYKDDDDKHHHHHHHHHHENLYFQSYVMFMKKSSIIVFFLTYGLFYVSSVLFPIDRTWYDALEKPSWTPPGMTIGMIWA VLFGLIALSVAIIYNNYGFKPKTFWFLFLLNYIFNQAFSYFQFSQKNLFLATVDCLLVAITTLLLIMFSSNLSKVSAWLL IPYFLWSAFATYLSWTIYSIN ; _entity_poly.pdbx_seq_one_letter_code_can ;MDYKDDDDKHHHHHHHHHHENLYFQSYVMFMKKSSIIVFFLTYGLFYVSSVLFPIDRTWYDALEKPSWTPPGMTIGMIWA VLFGLIALSVAIIYNNYGFKPKTFWFLFLLNYIFNQAFSYFQFSQKNLFLATVDCLLVAITTLLLIMFSSNLSKVSAWLL IPYFLWSAFATYLSWTIYSIN ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier NYCOMPS-GO.14070 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ASP n 1 3 TYR n 1 4 LYS n 1 5 ASP n 1 6 ASP n 1 7 ASP n 1 8 ASP n 1 9 LYS n 1 10 HIS n 1 11 HIS n 1 12 HIS n 1 13 HIS n 1 14 HIS n 1 15 HIS n 1 16 HIS n 1 17 HIS n 1 18 HIS n 1 19 HIS n 1 20 GLU n 1 21 ASN n 1 22 LEU n 1 23 TYR n 1 24 PHE n 1 25 GLN n 1 26 SER n 1 27 TYR n 1 28 VAL n 1 29 MET n 1 30 PHE n 1 31 MET n 1 32 LYS n 1 33 LYS n 1 34 SER n 1 35 SER n 1 36 ILE n 1 37 ILE n 1 38 VAL n 1 39 PHE n 1 40 PHE n 1 41 LEU n 1 42 THR n 1 43 TYR n 1 44 GLY n 1 45 LEU n 1 46 PHE n 1 47 TYR n 1 48 VAL n 1 49 SER n 1 50 SER n 1 51 VAL n 1 52 LEU n 1 53 PHE n 1 54 PRO n 1 55 ILE n 1 56 ASP n 1 57 ARG n 1 58 THR n 1 59 TRP n 1 60 TYR n 1 61 ASP n 1 62 ALA n 1 63 LEU n 1 64 GLU n 1 65 LYS n 1 66 PRO n 1 67 SER n 1 68 TRP n 1 69 THR n 1 70 PRO n 1 71 PRO n 1 72 GLY n 1 73 MET n 1 74 THR n 1 75 ILE n 1 76 GLY n 1 77 MET n 1 78 ILE n 1 79 TRP n 1 80 ALA n 1 81 VAL n 1 82 LEU n 1 83 PHE n 1 84 GLY n 1 85 LEU n 1 86 ILE n 1 87 ALA n 1 88 LEU n 1 89 SER n 1 90 VAL n 1 91 ALA n 1 92 ILE n 1 93 ILE n 1 94 TYR n 1 95 ASN n 1 96 ASN n 1 97 TYR n 1 98 GLY n 1 99 PHE n 1 100 LYS n 1 101 PRO n 1 102 LYS n 1 103 THR n 1 104 PHE n 1 105 TRP n 1 106 PHE n 1 107 LEU n 1 108 PHE n 1 109 LEU n 1 110 LEU n 1 111 ASN n 1 112 TYR n 1 113 ILE n 1 114 PHE n 1 115 ASN n 1 116 GLN n 1 117 ALA n 1 118 PHE n 1 119 SER n 1 120 TYR n 1 121 PHE n 1 122 GLN n 1 123 PHE n 1 124 SER n 1 125 GLN n 1 126 LYS n 1 127 ASN n 1 128 LEU n 1 129 PHE n 1 130 LEU n 1 131 ALA n 1 132 THR n 1 133 VAL n 1 134 ASP n 1 135 CYS n 1 136 LEU n 1 137 LEU n 1 138 VAL n 1 139 ALA n 1 140 ILE n 1 141 THR n 1 142 THR n 1 143 LEU n 1 144 LEU n 1 145 LEU n 1 146 ILE n 1 147 MET n 1 148 PHE n 1 149 SER n 1 150 SER n 1 151 ASN n 1 152 LEU n 1 153 SER n 1 154 LYS n 1 155 VAL n 1 156 SER n 1 157 ALA n 1 158 TRP n 1 159 LEU n 1 160 LEU n 1 161 ILE n 1 162 PRO n 1 163 TYR n 1 164 PHE n 1 165 LEU n 1 166 TRP n 1 167 SER n 1 168 ALA n 1 169 PHE n 1 170 ALA n 1 171 THR n 1 172 TYR n 1 173 LEU n 1 174 SER n 1 175 TRP n 1 176 THR n 1 177 ILE n 1 178 TYR n 1 179 SER n 1 180 ILE n 1 181 ASN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene BC_3136 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'DSM 31' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacillus cereus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 226900 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)pLysS' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'pMCSG7 10xHis 30021246' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -27 ? ? ? A . n A 1 2 ASP 2 -26 ? ? ? A . n A 1 3 TYR 3 -25 ? ? ? A . n A 1 4 LYS 4 -24 ? ? ? A . n A 1 5 ASP 5 -23 ? ? ? A . n A 1 6 ASP 6 -22 ? ? ? A . n A 1 7 ASP 7 -21 ? ? ? A . n A 1 8 ASP 8 -20 ? ? ? A . n A 1 9 LYS 9 -19 ? ? ? A . n A 1 10 HIS 10 -18 ? ? ? A . n A 1 11 HIS 11 -17 ? ? ? A . n A 1 12 HIS 12 -16 ? ? ? A . n A 1 13 HIS 13 -15 ? ? ? A . n A 1 14 HIS 14 -14 ? ? ? A . n A 1 15 HIS 15 -13 ? ? ? A . n A 1 16 HIS 16 -12 ? ? ? A . n A 1 17 HIS 17 -11 ? ? ? A . n A 1 18 HIS 18 -10 ? ? ? A . n A 1 19 HIS 19 -9 ? ? ? A . n A 1 20 GLU 20 -8 ? ? ? A . n A 1 21 ASN 21 -7 ? ? ? A . n A 1 22 LEU 22 -6 ? ? ? A . n A 1 23 TYR 23 -5 ? ? ? A . n A 1 24 PHE 24 -4 ? ? ? A . n A 1 25 GLN 25 -3 ? ? ? A . n A 1 26 SER 26 -2 ? ? ? A . n A 1 27 TYR 27 -1 ? ? ? A . n A 1 28 VAL 28 0 ? ? ? A . n A 1 29 MET 29 1 ? ? ? A . n A 1 30 PHE 30 2 ? ? ? A . n A 1 31 MET 31 3 3 MET MET A . n A 1 32 LYS 32 4 4 LYS LYS A . n A 1 33 LYS 33 5 5 LYS LYS A . n A 1 34 SER 34 6 6 SER SER A . n A 1 35 SER 35 7 7 SER SER A . n A 1 36 ILE 36 8 8 ILE ILE A . n A 1 37 ILE 37 9 9 ILE ILE A . n A 1 38 VAL 38 10 10 VAL VAL A . n A 1 39 PHE 39 11 11 PHE PHE A . n A 1 40 PHE 40 12 12 PHE PHE A . n A 1 41 LEU 41 13 13 LEU LEU A . n A 1 42 THR 42 14 14 THR THR A . n A 1 43 TYR 43 15 15 TYR TYR A . n A 1 44 GLY 44 16 16 GLY GLY A . n A 1 45 LEU 45 17 17 LEU LEU A . n A 1 46 PHE 46 18 18 PHE PHE A . n A 1 47 TYR 47 19 19 TYR TYR A . n A 1 48 VAL 48 20 20 VAL VAL A . n A 1 49 SER 49 21 21 SER SER A . n A 1 50 SER 50 22 22 SER SER A . n A 1 51 VAL 51 23 23 VAL VAL A . n A 1 52 LEU 52 24 24 LEU LEU A . n A 1 53 PHE 53 25 25 PHE PHE A . n A 1 54 PRO 54 26 26 PRO PRO A . n A 1 55 ILE 55 27 27 ILE ILE A . n A 1 56 ASP 56 28 28 ASP ASP A . n A 1 57 ARG 57 29 29 ARG ARG A . n A 1 58 THR 58 30 30 THR THR A . n A 1 59 TRP 59 31 31 TRP TRP A . n A 1 60 TYR 60 32 32 TYR TYR A . n A 1 61 ASP 61 33 33 ASP ASP A . n A 1 62 ALA 62 34 34 ALA ALA A . n A 1 63 LEU 63 35 35 LEU LEU A . n A 1 64 GLU 64 36 36 GLU GLU A . n A 1 65 LYS 65 37 37 LYS LYS A . n A 1 66 PRO 66 38 38 PRO PRO A . n A 1 67 SER 67 39 39 SER SER A . n A 1 68 TRP 68 40 40 TRP TRP A . n A 1 69 THR 69 41 41 THR THR A . n A 1 70 PRO 70 42 42 PRO PRO A . n A 1 71 PRO 71 43 43 PRO PRO A . n A 1 72 GLY 72 44 44 GLY GLY A . n A 1 73 MET 73 45 45 MET MET A . n A 1 74 THR 74 46 46 THR THR A . n A 1 75 ILE 75 47 47 ILE ILE A . n A 1 76 GLY 76 48 48 GLY GLY A . n A 1 77 MET 77 49 49 MET MET A . n A 1 78 ILE 78 50 50 ILE ILE A . n A 1 79 TRP 79 51 51 TRP TRP A . n A 1 80 ALA 80 52 52 ALA ALA A . n A 1 81 VAL 81 53 53 VAL VAL A . n A 1 82 LEU 82 54 54 LEU LEU A . n A 1 83 PHE 83 55 55 PHE PHE A . n A 1 84 GLY 84 56 56 GLY GLY A . n A 1 85 LEU 85 57 57 LEU LEU A . n A 1 86 ILE 86 58 58 ILE ILE A . n A 1 87 ALA 87 59 59 ALA ALA A . n A 1 88 LEU 88 60 60 LEU LEU A . n A 1 89 SER 89 61 61 SER SER A . n A 1 90 VAL 90 62 62 VAL VAL A . n A 1 91 ALA 91 63 63 ALA ALA A . n A 1 92 ILE 92 64 64 ILE ILE A . n A 1 93 ILE 93 65 65 ILE ILE A . n A 1 94 TYR 94 66 66 TYR TYR A . n A 1 95 ASN 95 67 67 ASN ASN A . n A 1 96 ASN 96 68 68 ASN ASN A . n A 1 97 TYR 97 69 69 TYR TYR A . n A 1 98 GLY 98 70 70 GLY GLY A . n A 1 99 PHE 99 71 71 PHE PHE A . n A 1 100 LYS 100 72 72 LYS LYS A . n A 1 101 PRO 101 73 73 PRO PRO A . n A 1 102 LYS 102 74 74 LYS LYS A . n A 1 103 THR 103 75 75 THR THR A . n A 1 104 PHE 104 76 76 PHE PHE A . n A 1 105 TRP 105 77 77 TRP TRP A . n A 1 106 PHE 106 78 78 PHE PHE A . n A 1 107 LEU 107 79 79 LEU LEU A . n A 1 108 PHE 108 80 80 PHE PHE A . n A 1 109 LEU 109 81 81 LEU LEU A . n A 1 110 LEU 110 82 82 LEU LEU A . n A 1 111 ASN 111 83 83 ASN ASN A . n A 1 112 TYR 112 84 84 TYR TYR A . n A 1 113 ILE 113 85 85 ILE ILE A . n A 1 114 PHE 114 86 86 PHE PHE A . n A 1 115 ASN 115 87 87 ASN ASN A . n A 1 116 GLN 116 88 88 GLN GLN A . n A 1 117 ALA 117 89 89 ALA ALA A . n A 1 118 PHE 118 90 90 PHE PHE A . n A 1 119 SER 119 91 91 SER SER A . n A 1 120 TYR 120 92 92 TYR TYR A . n A 1 121 PHE 121 93 93 PHE PHE A . n A 1 122 GLN 122 94 94 GLN GLN A . n A 1 123 PHE 123 95 95 PHE PHE A . n A 1 124 SER 124 96 96 SER SER A . n A 1 125 GLN 125 97 97 GLN GLN A . n A 1 126 LYS 126 98 98 LYS LYS A . n A 1 127 ASN 127 99 99 ASN ASN A . n A 1 128 LEU 128 100 100 LEU LEU A . n A 1 129 PHE 129 101 101 PHE PHE A . n A 1 130 LEU 130 102 102 LEU LEU A . n A 1 131 ALA 131 103 103 ALA ALA A . n A 1 132 THR 132 104 104 THR THR A . n A 1 133 VAL 133 105 105 VAL VAL A . n A 1 134 ASP 134 106 106 ASP ASP A . n A 1 135 CYS 135 107 107 CYS CYS A . n A 1 136 LEU 136 108 108 LEU LEU A . n A 1 137 LEU 137 109 109 LEU LEU A . n A 1 138 VAL 138 110 110 VAL VAL A . n A 1 139 ALA 139 111 111 ALA ALA A . n A 1 140 ILE 140 112 112 ILE ILE A . n A 1 141 THR 141 113 113 THR THR A . n A 1 142 THR 142 114 114 THR THR A . n A 1 143 LEU 143 115 115 LEU LEU A . n A 1 144 LEU 144 116 116 LEU LEU A . n A 1 145 LEU 145 117 117 LEU LEU A . n A 1 146 ILE 146 118 118 ILE ILE A . n A 1 147 MET 147 119 119 MET MET A . n A 1 148 PHE 148 120 120 PHE PHE A . n A 1 149 SER 149 121 121 SER SER A . n A 1 150 SER 150 122 122 SER SER A . n A 1 151 ASN 151 123 123 ASN ASN A . n A 1 152 LEU 152 124 124 LEU LEU A . n A 1 153 SER 153 125 125 SER SER A . n A 1 154 LYS 154 126 126 LYS LYS A . n A 1 155 VAL 155 127 127 VAL VAL A . n A 1 156 SER 156 128 128 SER SER A . n A 1 157 ALA 157 129 129 ALA ALA A . n A 1 158 TRP 158 130 130 TRP TRP A . n A 1 159 LEU 159 131 131 LEU LEU A . n A 1 160 LEU 160 132 132 LEU LEU A . n A 1 161 ILE 161 133 133 ILE ILE A . n A 1 162 PRO 162 134 134 PRO PRO A . n A 1 163 TYR 163 135 135 TYR TYR A . n A 1 164 PHE 164 136 136 PHE PHE A . n A 1 165 LEU 165 137 137 LEU LEU A . n A 1 166 TRP 166 138 138 TRP TRP A . n A 1 167 SER 167 139 139 SER SER A . n A 1 168 ALA 168 140 140 ALA ALA A . n A 1 169 PHE 169 141 141 PHE PHE A . n A 1 170 ALA 170 142 142 ALA ALA A . n A 1 171 THR 171 143 143 THR THR A . n A 1 172 TYR 172 144 144 TYR TYR A . n A 1 173 LEU 173 145 145 LEU LEU A . n A 1 174 SER 174 146 146 SER SER A . n A 1 175 TRP 175 147 147 TRP TRP A . n A 1 176 THR 176 148 148 THR THR A . n A 1 177 ILE 177 149 149 ILE ILE A . n A 1 178 TYR 178 150 150 TYR TYR A . n A 1 179 SER 179 151 151 SER SER A . n A 1 180 ILE 180 152 152 ILE ILE A . n A 1 181 ASN 181 153 153 ASN ASN A . n B 1 1 MET 1 -27 ? ? ? B . n B 1 2 ASP 2 -26 ? ? ? B . n B 1 3 TYR 3 -25 ? ? ? B . n B 1 4 LYS 4 -24 ? ? ? B . n B 1 5 ASP 5 -23 ? ? ? B . n B 1 6 ASP 6 -22 ? ? ? B . n B 1 7 ASP 7 -21 ? ? ? B . n B 1 8 ASP 8 -20 ? ? ? B . n B 1 9 LYS 9 -19 ? ? ? B . n B 1 10 HIS 10 -18 ? ? ? B . n B 1 11 HIS 11 -17 ? ? ? B . n B 1 12 HIS 12 -16 ? ? ? B . n B 1 13 HIS 13 -15 ? ? ? B . n B 1 14 HIS 14 -14 ? ? ? B . n B 1 15 HIS 15 -13 ? ? ? B . n B 1 16 HIS 16 -12 ? ? ? B . n B 1 17 HIS 17 -11 ? ? ? B . n B 1 18 HIS 18 -10 ? ? ? B . n B 1 19 HIS 19 -9 ? ? ? B . n B 1 20 GLU 20 -8 ? ? ? B . n B 1 21 ASN 21 -7 ? ? ? B . n B 1 22 LEU 22 -6 ? ? ? B . n B 1 23 TYR 23 -5 ? ? ? B . n B 1 24 PHE 24 -4 ? ? ? B . n B 1 25 GLN 25 -3 ? ? ? B . n B 1 26 SER 26 -2 ? ? ? B . n B 1 27 TYR 27 -1 ? ? ? B . n B 1 28 VAL 28 0 ? ? ? B . n B 1 29 MET 29 1 ? ? ? B . n B 1 30 PHE 30 2 ? ? ? B . n B 1 31 MET 31 3 3 MET MET B . n B 1 32 LYS 32 4 4 LYS LYS B . n B 1 33 LYS 33 5 5 LYS LYS B . n B 1 34 SER 34 6 6 SER SER B . n B 1 35 SER 35 7 7 SER SER B . n B 1 36 ILE 36 8 8 ILE ILE B . n B 1 37 ILE 37 9 9 ILE ILE B . n B 1 38 VAL 38 10 10 VAL VAL B . n B 1 39 PHE 39 11 11 PHE PHE B . n B 1 40 PHE 40 12 12 PHE PHE B . n B 1 41 LEU 41 13 13 LEU LEU B . n B 1 42 THR 42 14 14 THR THR B . n B 1 43 TYR 43 15 15 TYR TYR B . n B 1 44 GLY 44 16 16 GLY GLY B . n B 1 45 LEU 45 17 17 LEU LEU B . n B 1 46 PHE 46 18 18 PHE PHE B . n B 1 47 TYR 47 19 19 TYR TYR B . n B 1 48 VAL 48 20 20 VAL VAL B . n B 1 49 SER 49 21 21 SER SER B . n B 1 50 SER 50 22 22 SER SER B . n B 1 51 VAL 51 23 23 VAL VAL B . n B 1 52 LEU 52 24 24 LEU LEU B . n B 1 53 PHE 53 25 25 PHE PHE B . n B 1 54 PRO 54 26 26 PRO PRO B . n B 1 55 ILE 55 27 27 ILE ILE B . n B 1 56 ASP 56 28 28 ASP ASP B . n B 1 57 ARG 57 29 29 ARG ARG B . n B 1 58 THR 58 30 30 THR THR B . n B 1 59 TRP 59 31 31 TRP TRP B . n B 1 60 TYR 60 32 32 TYR TYR B . n B 1 61 ASP 61 33 33 ASP ASP B . n B 1 62 ALA 62 34 34 ALA ALA B . n B 1 63 LEU 63 35 35 LEU LEU B . n B 1 64 GLU 64 36 36 GLU GLU B . n B 1 65 LYS 65 37 37 LYS LYS B . n B 1 66 PRO 66 38 38 PRO PRO B . n B 1 67 SER 67 39 39 SER SER B . n B 1 68 TRP 68 40 40 TRP TRP B . n B 1 69 THR 69 41 41 THR THR B . n B 1 70 PRO 70 42 42 PRO PRO B . n B 1 71 PRO 71 43 43 PRO PRO B . n B 1 72 GLY 72 44 44 GLY GLY B . n B 1 73 MET 73 45 45 MET ALA B . n B 1 74 THR 74 46 46 THR THR B . n B 1 75 ILE 75 47 47 ILE ILE B . n B 1 76 GLY 76 48 48 GLY GLY B . n B 1 77 MET 77 49 49 MET MET B . n B 1 78 ILE 78 50 50 ILE ILE B . n B 1 79 TRP 79 51 51 TRP TRP B . n B 1 80 ALA 80 52 52 ALA ALA B . n B 1 81 VAL 81 53 53 VAL VAL B . n B 1 82 LEU 82 54 54 LEU LEU B . n B 1 83 PHE 83 55 55 PHE PHE B . n B 1 84 GLY 84 56 56 GLY GLY B . n B 1 85 LEU 85 57 57 LEU LEU B . n B 1 86 ILE 86 58 58 ILE ILE B . n B 1 87 ALA 87 59 59 ALA ALA B . n B 1 88 LEU 88 60 60 LEU LEU B . n B 1 89 SER 89 61 61 SER SER B . n B 1 90 VAL 90 62 62 VAL VAL B . n B 1 91 ALA 91 63 63 ALA ALA B . n B 1 92 ILE 92 64 64 ILE ILE B . n B 1 93 ILE 93 65 65 ILE ILE B . n B 1 94 TYR 94 66 66 TYR TYR B . n B 1 95 ASN 95 67 67 ASN ASN B . n B 1 96 ASN 96 68 68 ASN ASN B . n B 1 97 TYR 97 69 69 TYR TYR B . n B 1 98 GLY 98 70 70 GLY GLY B . n B 1 99 PHE 99 71 71 PHE PHE B . n B 1 100 LYS 100 72 72 LYS LYS B . n B 1 101 PRO 101 73 73 PRO PRO B . n B 1 102 LYS 102 74 74 LYS LYS B . n B 1 103 THR 103 75 75 THR THR B . n B 1 104 PHE 104 76 76 PHE PHE B . n B 1 105 TRP 105 77 77 TRP TRP B . n B 1 106 PHE 106 78 78 PHE PHE B . n B 1 107 LEU 107 79 79 LEU LEU B . n B 1 108 PHE 108 80 80 PHE PHE B . n B 1 109 LEU 109 81 81 LEU LEU B . n B 1 110 LEU 110 82 82 LEU LEU B . n B 1 111 ASN 111 83 83 ASN ASN B . n B 1 112 TYR 112 84 84 TYR TYR B . n B 1 113 ILE 113 85 85 ILE ILE B . n B 1 114 PHE 114 86 86 PHE PHE B . n B 1 115 ASN 115 87 87 ASN ASN B . n B 1 116 GLN 116 88 88 GLN GLN B . n B 1 117 ALA 117 89 89 ALA ALA B . n B 1 118 PHE 118 90 90 PHE PHE B . n B 1 119 SER 119 91 91 SER SER B . n B 1 120 TYR 120 92 92 TYR TYR B . n B 1 121 PHE 121 93 93 PHE PHE B . n B 1 122 GLN 122 94 94 GLN GLN B . n B 1 123 PHE 123 95 95 PHE PHE B . n B 1 124 SER 124 96 96 SER SER B . n B 1 125 GLN 125 97 97 GLN GLN B . n B 1 126 LYS 126 98 98 LYS LYS B . n B 1 127 ASN 127 99 99 ASN ASN B . n B 1 128 LEU 128 100 100 LEU LEU B . n B 1 129 PHE 129 101 101 PHE PHE B . n B 1 130 LEU 130 102 102 LEU LEU B . n B 1 131 ALA 131 103 103 ALA ALA B . n B 1 132 THR 132 104 104 THR THR B . n B 1 133 VAL 133 105 105 VAL VAL B . n B 1 134 ASP 134 106 106 ASP ASP B . n B 1 135 CYS 135 107 107 CYS CYS B . n B 1 136 LEU 136 108 108 LEU LEU B . n B 1 137 LEU 137 109 109 LEU LEU B . n B 1 138 VAL 138 110 110 VAL VAL B . n B 1 139 ALA 139 111 111 ALA ALA B . n B 1 140 ILE 140 112 112 ILE ILE B . n B 1 141 THR 141 113 113 THR THR B . n B 1 142 THR 142 114 114 THR THR B . n B 1 143 LEU 143 115 115 LEU LEU B . n B 1 144 LEU 144 116 116 LEU LEU B . n B 1 145 LEU 145 117 117 LEU LEU B . n B 1 146 ILE 146 118 118 ILE ILE B . n B 1 147 MET 147 119 119 MET MET B . n B 1 148 PHE 148 120 120 PHE PHE B . n B 1 149 SER 149 121 121 SER SER B . n B 1 150 SER 150 122 122 SER SER B . n B 1 151 ASN 151 123 123 ASN ASN B . n B 1 152 LEU 152 124 124 LEU LEU B . n B 1 153 SER 153 125 125 SER SER B . n B 1 154 LYS 154 126 126 LYS LYS B . n B 1 155 VAL 155 127 127 VAL VAL B . n B 1 156 SER 156 128 128 SER SER B . n B 1 157 ALA 157 129 129 ALA ALA B . n B 1 158 TRP 158 130 130 TRP TRP B . n B 1 159 LEU 159 131 131 LEU LEU B . n B 1 160 LEU 160 132 132 LEU LEU B . n B 1 161 ILE 161 133 133 ILE ILE B . n B 1 162 PRO 162 134 134 PRO PRO B . n B 1 163 TYR 163 135 135 TYR TYR B . n B 1 164 PHE 164 136 136 PHE PHE B . n B 1 165 LEU 165 137 137 LEU LEU B . n B 1 166 TRP 166 138 138 TRP TRP B . n B 1 167 SER 167 139 139 SER SER B . n B 1 168 ALA 168 140 140 ALA ALA B . n B 1 169 PHE 169 141 141 PHE PHE B . n B 1 170 ALA 170 142 142 ALA ALA B . n B 1 171 THR 171 143 143 THR THR B . n B 1 172 TYR 172 144 144 TYR TYR B . n B 1 173 LEU 173 145 145 LEU LEU B . n B 1 174 SER 174 146 146 SER SER B . n B 1 175 TRP 175 147 147 TRP TRP B . n B 1 176 THR 176 148 148 THR THR B . n B 1 177 ILE 177 149 149 ILE ILE B . n B 1 178 TYR 178 150 150 TYR TYR B . n B 1 179 SER 179 151 151 SER SER B . n B 1 180 ILE 180 152 152 ILE ILE B . n B 1 181 ASN 181 153 153 ASN ASN B . n # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 4 ? CG ? A LYS 32 CG 2 1 Y 1 A LYS 4 ? CD ? A LYS 32 CD 3 1 Y 1 A LYS 4 ? CE ? A LYS 32 CE 4 1 Y 1 A LYS 4 ? NZ ? A LYS 32 NZ 5 1 Y 1 A ILE 27 ? CG1 ? A ILE 55 CG1 6 1 Y 1 A ILE 27 ? CG2 ? A ILE 55 CG2 7 1 Y 1 A ILE 27 ? CD1 ? A ILE 55 CD1 8 1 Y 1 A ARG 29 ? CG ? A ARG 57 CG 9 1 Y 1 A ARG 29 ? CD ? A ARG 57 CD 10 1 Y 1 A ARG 29 ? NE ? A ARG 57 NE 11 1 Y 1 A ARG 29 ? CZ ? A ARG 57 CZ 12 1 Y 1 A ARG 29 ? NH1 ? A ARG 57 NH1 13 1 Y 1 A ARG 29 ? NH2 ? A ARG 57 NH2 14 1 Y 1 A MET 45 ? CG ? A MET 73 CG 15 1 Y 1 A MET 45 ? SD ? A MET 73 SD 16 1 Y 1 A MET 45 ? CE ? A MET 73 CE 17 1 Y 1 A MET 49 ? CG ? A MET 77 CG 18 1 Y 1 A MET 49 ? SD ? A MET 77 SD 19 1 Y 1 A MET 49 ? CE ? A MET 77 CE 20 1 Y 1 A LYS 72 ? CG ? A LYS 100 CG 21 1 Y 1 A LYS 72 ? CD ? A LYS 100 CD 22 1 Y 1 A LYS 72 ? CE ? A LYS 100 CE 23 1 Y 1 A LYS 72 ? NZ ? A LYS 100 NZ 24 1 Y 1 A LYS 74 ? CG ? A LYS 102 CG 25 1 Y 1 A LYS 74 ? CD ? A LYS 102 CD 26 1 Y 1 A LYS 74 ? CE ? A LYS 102 CE 27 1 Y 1 A LYS 74 ? NZ ? A LYS 102 NZ 28 1 Y 1 B LYS 4 ? CG ? B LYS 32 CG 29 1 Y 1 B LYS 4 ? CD ? B LYS 32 CD 30 1 Y 1 B LYS 4 ? CE ? B LYS 32 CE 31 1 Y 1 B LYS 4 ? NZ ? B LYS 32 NZ 32 1 Y 1 B ILE 27 ? CG1 ? B ILE 55 CG1 33 1 Y 1 B ILE 27 ? CG2 ? B ILE 55 CG2 34 1 Y 1 B ILE 27 ? CD1 ? B ILE 55 CD1 35 1 Y 1 B ARG 29 ? CG ? B ARG 57 CG 36 1 Y 1 B ARG 29 ? CD ? B ARG 57 CD 37 1 Y 1 B ARG 29 ? NE ? B ARG 57 NE 38 1 Y 1 B ARG 29 ? CZ ? B ARG 57 CZ 39 1 Y 1 B ARG 29 ? NH1 ? B ARG 57 NH1 40 1 Y 1 B ARG 29 ? NH2 ? B ARG 57 NH2 41 1 Y 1 B MET 45 ? CG ? B MET 73 CG 42 1 Y 1 B MET 45 ? SD ? B MET 73 SD 43 1 Y 1 B MET 45 ? CE ? B MET 73 CE 44 1 Y 1 B MET 49 ? CG ? B MET 77 CG 45 1 Y 1 B MET 49 ? SD ? B MET 77 SD 46 1 Y 1 B MET 49 ? CE ? B MET 77 CE 47 1 Y 1 B LYS 72 ? CG ? B LYS 100 CG 48 1 Y 1 B LYS 72 ? CD ? B LYS 100 CD 49 1 Y 1 B LYS 72 ? CE ? B LYS 100 CE 50 1 Y 1 B LYS 72 ? NZ ? B LYS 100 NZ 51 1 Y 1 B LYS 74 ? CG ? B LYS 102 CG 52 1 Y 1 B LYS 74 ? CD ? B LYS 102 CD 53 1 Y 1 B LYS 74 ? CE ? B LYS 102 CE 54 1 Y 1 B LYS 74 ? NZ ? B LYS 102 NZ # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MAR345dtb 'data collection' . ? 1 PHASER phasing . ? 2 PHENIX refinement '(phenix.refine: 1.9_1690)' ? 3 XDS 'data reduction' . ? 4 XDS 'data scaling' . ? 5 # _cell.entry_id 4RYJ _cell.length_a 33.980 _cell.length_b 104.930 _cell.length_c 53.860 _cell.angle_alpha 90.00 _cell.angle_beta 104.89 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4RYJ _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # _exptl.entry_id 4RYJ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.16 _exptl_crystal.density_percent_sol 43.01 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method EVAPORATION _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.2 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;A sitting drop containing 2 L of BcTSPO (10mg/mL) was mixed with 2 uL of solution A (0.15 M sodium formate, 0.1 M HEPES pH7.2, 18 % w/v PEG 3350) and placed over a well containing 80 uL of 0.1 M HEPES pH7.2, 18 % w/v PEG 3350 and 20 uL of solution A, EVAPORATION, temperature 293K ; # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MAR CCD 165 mm' _diffrn_detector.pdbx_collection_date 2014-06-14 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Single crystal bender' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9791 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X4C' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X4C _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9791 # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4RYJ _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 38 _reflns.d_resolution_high 4.1 _reflns.number_obs 5345 _reflns.number_all 10424 _reflns.percent_possible_obs 94.3 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 1.63 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 1.95 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 4.10 _reflns_shell.d_res_low 4.21 _reflns_shell.percent_possible_all 91.2 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4RYJ _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 2868 _refine.ls_number_reflns_all 2868 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 36.951 _refine.ls_d_res_high 4.100 _refine.ls_percent_reflns_obs 99.03 _refine.ls_R_factor_obs 0.3466 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.3451 _refine.ls_R_factor_R_free 0.3736 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.92 _refine.ls_number_reflns_R_free 141 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.89 _refine.pdbx_overall_phase_error 45.07 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2444 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 2444 _refine_hist.d_res_high 4.100 _refine_hist.d_res_low 36.951 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.005 ? ? 2536 'X-RAY DIFFRACTION' ? f_angle_d 1.068 ? ? 3482 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 11.616 ? ? 808 'X-RAY DIFFRACTION' ? f_chiral_restr 0.043 ? ? 398 'X-RAY DIFFRACTION' ? f_plane_restr 0.005 ? ? 408 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 4.1001 _refine_ls_shell.d_res_low 36.9528 _refine_ls_shell.number_reflns_R_work 2727 _refine_ls_shell.R_factor_R_work 0.3451 _refine_ls_shell.percent_reflns_obs 99.00 _refine_ls_shell.R_factor_R_free 0.3736 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 141 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _database_PDB_matrix.entry_id 4RYJ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4RYJ _struct.title 'Crystal structure of apo dimer of BcTSPO' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4RYJ _struct_keywords.pdbx_keywords 'MEMBRANE PROTEIN' _struct_keywords.text ;Structural Genomics, PSI-Biology, Protein Structure Initiative, New York Consortium on Membrane Protein Structure, NYCOMPS, Receptor, MEMBRANE PROTEIN ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q81BL7_BACCR _struct_ref.pdbx_db_accession Q81BL7 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MFMKKSSIIVFFLTYGLFYVSSVLFPIDRTWYDALEKPSWTPPGMTIGMIWAVLFGLIALSVAIIYNNYGFKPKTFWFLF LLNYIFNQAFSYFQFSQKNLFLATVDCLLVAITTLLLIMFSSNLSKVSAWLLIPYFLWSAFATYLSWTIYSIN ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4RYJ A 29 ? 181 ? Q81BL7 1 ? 153 ? 1 153 2 1 4RYJ B 29 ? 181 ? Q81BL7 1 ? 153 ? 1 153 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4RYJ MET A 1 ? UNP Q81BL7 ? ? 'expression tag' -27 1 1 4RYJ ASP A 2 ? UNP Q81BL7 ? ? 'expression tag' -26 2 1 4RYJ TYR A 3 ? UNP Q81BL7 ? ? 'expression tag' -25 3 1 4RYJ LYS A 4 ? UNP Q81BL7 ? ? 'expression tag' -24 4 1 4RYJ ASP A 5 ? UNP Q81BL7 ? ? 'expression tag' -23 5 1 4RYJ ASP A 6 ? UNP Q81BL7 ? ? 'expression tag' -22 6 1 4RYJ ASP A 7 ? UNP Q81BL7 ? ? 'expression tag' -21 7 1 4RYJ ASP A 8 ? UNP Q81BL7 ? ? 'expression tag' -20 8 1 4RYJ LYS A 9 ? UNP Q81BL7 ? ? 'expression tag' -19 9 1 4RYJ HIS A 10 ? UNP Q81BL7 ? ? 'expression tag' -18 10 1 4RYJ HIS A 11 ? UNP Q81BL7 ? ? 'expression tag' -17 11 1 4RYJ HIS A 12 ? UNP Q81BL7 ? ? 'expression tag' -16 12 1 4RYJ HIS A 13 ? UNP Q81BL7 ? ? 'expression tag' -15 13 1 4RYJ HIS A 14 ? UNP Q81BL7 ? ? 'expression tag' -14 14 1 4RYJ HIS A 15 ? UNP Q81BL7 ? ? 'expression tag' -13 15 1 4RYJ HIS A 16 ? UNP Q81BL7 ? ? 'expression tag' -12 16 1 4RYJ HIS A 17 ? UNP Q81BL7 ? ? 'expression tag' -11 17 1 4RYJ HIS A 18 ? UNP Q81BL7 ? ? 'expression tag' -10 18 1 4RYJ HIS A 19 ? UNP Q81BL7 ? ? 'expression tag' -9 19 1 4RYJ GLU A 20 ? UNP Q81BL7 ? ? 'expression tag' -8 20 1 4RYJ ASN A 21 ? UNP Q81BL7 ? ? 'expression tag' -7 21 1 4RYJ LEU A 22 ? UNP Q81BL7 ? ? 'expression tag' -6 22 1 4RYJ TYR A 23 ? UNP Q81BL7 ? ? 'expression tag' -5 23 1 4RYJ PHE A 24 ? UNP Q81BL7 ? ? 'expression tag' -4 24 1 4RYJ GLN A 25 ? UNP Q81BL7 ? ? 'expression tag' -3 25 1 4RYJ SER A 26 ? UNP Q81BL7 ? ? 'expression tag' -2 26 1 4RYJ TYR A 27 ? UNP Q81BL7 ? ? 'expression tag' -1 27 1 4RYJ VAL A 28 ? UNP Q81BL7 ? ? 'expression tag' 0 28 2 4RYJ MET B 1 ? UNP Q81BL7 ? ? 'expression tag' -27 29 2 4RYJ ASP B 2 ? UNP Q81BL7 ? ? 'expression tag' -26 30 2 4RYJ TYR B 3 ? UNP Q81BL7 ? ? 'expression tag' -25 31 2 4RYJ LYS B 4 ? UNP Q81BL7 ? ? 'expression tag' -24 32 2 4RYJ ASP B 5 ? UNP Q81BL7 ? ? 'expression tag' -23 33 2 4RYJ ASP B 6 ? UNP Q81BL7 ? ? 'expression tag' -22 34 2 4RYJ ASP B 7 ? UNP Q81BL7 ? ? 'expression tag' -21 35 2 4RYJ ASP B 8 ? UNP Q81BL7 ? ? 'expression tag' -20 36 2 4RYJ LYS B 9 ? UNP Q81BL7 ? ? 'expression tag' -19 37 2 4RYJ HIS B 10 ? UNP Q81BL7 ? ? 'expression tag' -18 38 2 4RYJ HIS B 11 ? UNP Q81BL7 ? ? 'expression tag' -17 39 2 4RYJ HIS B 12 ? UNP Q81BL7 ? ? 'expression tag' -16 40 2 4RYJ HIS B 13 ? UNP Q81BL7 ? ? 'expression tag' -15 41 2 4RYJ HIS B 14 ? UNP Q81BL7 ? ? 'expression tag' -14 42 2 4RYJ HIS B 15 ? UNP Q81BL7 ? ? 'expression tag' -13 43 2 4RYJ HIS B 16 ? UNP Q81BL7 ? ? 'expression tag' -12 44 2 4RYJ HIS B 17 ? UNP Q81BL7 ? ? 'expression tag' -11 45 2 4RYJ HIS B 18 ? UNP Q81BL7 ? ? 'expression tag' -10 46 2 4RYJ HIS B 19 ? UNP Q81BL7 ? ? 'expression tag' -9 47 2 4RYJ GLU B 20 ? UNP Q81BL7 ? ? 'expression tag' -8 48 2 4RYJ ASN B 21 ? UNP Q81BL7 ? ? 'expression tag' -7 49 2 4RYJ LEU B 22 ? UNP Q81BL7 ? ? 'expression tag' -6 50 2 4RYJ TYR B 23 ? UNP Q81BL7 ? ? 'expression tag' -5 51 2 4RYJ PHE B 24 ? UNP Q81BL7 ? ? 'expression tag' -4 52 2 4RYJ GLN B 25 ? UNP Q81BL7 ? ? 'expression tag' -3 53 2 4RYJ SER B 26 ? UNP Q81BL7 ? ? 'expression tag' -2 54 2 4RYJ TYR B 27 ? UNP Q81BL7 ? ? 'expression tag' -1 55 2 4RYJ VAL B 28 ? UNP Q81BL7 ? ? 'expression tag' 0 56 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5770 ? 1 MORE -59 ? 1 'SSA (A^2)' 15230 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LYS A 32 ? PHE A 46 ? LYS A 4 PHE A 18 1 ? 15 HELX_P HELX_P2 2 TYR A 47 ? PHE A 53 ? TYR A 19 PHE A 25 1 ? 7 HELX_P HELX_P3 3 ASP A 56 ? ALA A 62 ? ASP A 28 ALA A 34 1 ? 7 HELX_P HELX_P4 4 PRO A 71 ? GLY A 98 ? PRO A 43 GLY A 70 1 ? 28 HELX_P HELX_P5 5 PRO A 101 ? SER A 124 ? PRO A 73 SER A 96 1 ? 24 HELX_P HELX_P6 6 ASN A 127 ? ASN A 151 ? ASN A 99 ASN A 123 1 ? 25 HELX_P HELX_P7 7 SER A 153 ? ILE A 180 ? SER A 125 ILE A 152 1 ? 28 HELX_P HELX_P8 8 LYS B 32 ? PHE B 46 ? LYS B 4 PHE B 18 1 ? 15 HELX_P HELX_P9 9 TYR B 47 ? PHE B 53 ? TYR B 19 PHE B 25 1 ? 7 HELX_P HELX_P10 10 ASP B 56 ? LEU B 63 ? ASP B 28 LEU B 35 1 ? 8 HELX_P HELX_P11 11 PRO B 71 ? GLY B 98 ? PRO B 43 GLY B 70 1 ? 28 HELX_P HELX_P12 12 PRO B 101 ? SER B 124 ? PRO B 73 SER B 96 1 ? 24 HELX_P HELX_P13 13 ASN B 127 ? SER B 150 ? ASN B 99 SER B 122 1 ? 24 HELX_P HELX_P14 14 SER B 153 ? LEU B 160 ? SER B 125 LEU B 132 1 ? 8 HELX_P HELX_P15 15 LEU B 160 ? ILE B 180 ? LEU B 132 ILE B 152 1 ? 21 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 96 ? ? -95.38 -63.38 2 1 SER B 96 ? ? -95.76 -63.30 # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name PSI:Biology _pdbx_SG_project.full_name_of_center 'New York Consortium on Membrane Protein Structure' _pdbx_SG_project.initial_of_center NYCOMPS # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -27 ? A MET 1 2 1 Y 1 A ASP -26 ? A ASP 2 3 1 Y 1 A TYR -25 ? A TYR 3 4 1 Y 1 A LYS -24 ? A LYS 4 5 1 Y 1 A ASP -23 ? A ASP 5 6 1 Y 1 A ASP -22 ? A ASP 6 7 1 Y 1 A ASP -21 ? A ASP 7 8 1 Y 1 A ASP -20 ? A ASP 8 9 1 Y 1 A LYS -19 ? A LYS 9 10 1 Y 1 A HIS -18 ? A HIS 10 11 1 Y 1 A HIS -17 ? A HIS 11 12 1 Y 1 A HIS -16 ? A HIS 12 13 1 Y 1 A HIS -15 ? A HIS 13 14 1 Y 1 A HIS -14 ? A HIS 14 15 1 Y 1 A HIS -13 ? A HIS 15 16 1 Y 1 A HIS -12 ? A HIS 16 17 1 Y 1 A HIS -11 ? A HIS 17 18 1 Y 1 A HIS -10 ? A HIS 18 19 1 Y 1 A HIS -9 ? A HIS 19 20 1 Y 1 A GLU -8 ? A GLU 20 21 1 Y 1 A ASN -7 ? A ASN 21 22 1 Y 1 A LEU -6 ? A LEU 22 23 1 Y 1 A TYR -5 ? A TYR 23 24 1 Y 1 A PHE -4 ? A PHE 24 25 1 Y 1 A GLN -3 ? A GLN 25 26 1 Y 1 A SER -2 ? A SER 26 27 1 Y 1 A TYR -1 ? A TYR 27 28 1 Y 1 A VAL 0 ? A VAL 28 29 1 Y 1 A MET 1 ? A MET 29 30 1 Y 1 A PHE 2 ? A PHE 30 31 1 Y 1 B MET -27 ? B MET 1 32 1 Y 1 B ASP -26 ? B ASP 2 33 1 Y 1 B TYR -25 ? B TYR 3 34 1 Y 1 B LYS -24 ? B LYS 4 35 1 Y 1 B ASP -23 ? B ASP 5 36 1 Y 1 B ASP -22 ? B ASP 6 37 1 Y 1 B ASP -21 ? B ASP 7 38 1 Y 1 B ASP -20 ? B ASP 8 39 1 Y 1 B LYS -19 ? B LYS 9 40 1 Y 1 B HIS -18 ? B HIS 10 41 1 Y 1 B HIS -17 ? B HIS 11 42 1 Y 1 B HIS -16 ? B HIS 12 43 1 Y 1 B HIS -15 ? B HIS 13 44 1 Y 1 B HIS -14 ? B HIS 14 45 1 Y 1 B HIS -13 ? B HIS 15 46 1 Y 1 B HIS -12 ? B HIS 16 47 1 Y 1 B HIS -11 ? B HIS 17 48 1 Y 1 B HIS -10 ? B HIS 18 49 1 Y 1 B HIS -9 ? B HIS 19 50 1 Y 1 B GLU -8 ? B GLU 20 51 1 Y 1 B ASN -7 ? B ASN 21 52 1 Y 1 B LEU -6 ? B LEU 22 53 1 Y 1 B TYR -5 ? B TYR 23 54 1 Y 1 B PHE -4 ? B PHE 24 55 1 Y 1 B GLN -3 ? B GLN 25 56 1 Y 1 B SER -2 ? B SER 26 57 1 Y 1 B TYR -1 ? B TYR 27 58 1 Y 1 B VAL 0 ? B VAL 28 59 1 Y 1 B MET 1 ? B MET 29 60 1 Y 1 B PHE 2 ? B PHE 30 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 PHE N N N N 247 PHE CA C N S 248 PHE C C N N 249 PHE O O N N 250 PHE CB C N N 251 PHE CG C Y N 252 PHE CD1 C Y N 253 PHE CD2 C Y N 254 PHE CE1 C Y N 255 PHE CE2 C Y N 256 PHE CZ C Y N 257 PHE OXT O N N 258 PHE H H N N 259 PHE H2 H N N 260 PHE HA H N N 261 PHE HB2 H N N 262 PHE HB3 H N N 263 PHE HD1 H N N 264 PHE HD2 H N N 265 PHE HE1 H N N 266 PHE HE2 H N N 267 PHE HZ H N N 268 PHE HXT H N N 269 PRO N N N N 270 PRO CA C N S 271 PRO C C N N 272 PRO O O N N 273 PRO CB C N N 274 PRO CG C N N 275 PRO CD C N N 276 PRO OXT O N N 277 PRO H H N N 278 PRO HA H N N 279 PRO HB2 H N N 280 PRO HB3 H N N 281 PRO HG2 H N N 282 PRO HG3 H N N 283 PRO HD2 H N N 284 PRO HD3 H N N 285 PRO HXT H N N 286 SER N N N N 287 SER CA C N S 288 SER C C N N 289 SER O O N N 290 SER CB C N N 291 SER OG O N N 292 SER OXT O N N 293 SER H H N N 294 SER H2 H N N 295 SER HA H N N 296 SER HB2 H N N 297 SER HB3 H N N 298 SER HG H N N 299 SER HXT H N N 300 THR N N N N 301 THR CA C N S 302 THR C C N N 303 THR O O N N 304 THR CB C N R 305 THR OG1 O N N 306 THR CG2 C N N 307 THR OXT O N N 308 THR H H N N 309 THR H2 H N N 310 THR HA H N N 311 THR HB H N N 312 THR HG1 H N N 313 THR HG21 H N N 314 THR HG22 H N N 315 THR HG23 H N N 316 THR HXT H N N 317 TRP N N N N 318 TRP CA C N S 319 TRP C C N N 320 TRP O O N N 321 TRP CB C N N 322 TRP CG C Y N 323 TRP CD1 C Y N 324 TRP CD2 C Y N 325 TRP NE1 N Y N 326 TRP CE2 C Y N 327 TRP CE3 C Y N 328 TRP CZ2 C Y N 329 TRP CZ3 C Y N 330 TRP CH2 C Y N 331 TRP OXT O N N 332 TRP H H N N 333 TRP H2 H N N 334 TRP HA H N N 335 TRP HB2 H N N 336 TRP HB3 H N N 337 TRP HD1 H N N 338 TRP HE1 H N N 339 TRP HE3 H N N 340 TRP HZ2 H N N 341 TRP HZ3 H N N 342 TRP HH2 H N N 343 TRP HXT H N N 344 TYR N N N N 345 TYR CA C N S 346 TYR C C N N 347 TYR O O N N 348 TYR CB C N N 349 TYR CG C Y N 350 TYR CD1 C Y N 351 TYR CD2 C Y N 352 TYR CE1 C Y N 353 TYR CE2 C Y N 354 TYR CZ C Y N 355 TYR OH O N N 356 TYR OXT O N N 357 TYR H H N N 358 TYR H2 H N N 359 TYR HA H N N 360 TYR HB2 H N N 361 TYR HB3 H N N 362 TYR HD1 H N N 363 TYR HD2 H N N 364 TYR HE1 H N N 365 TYR HE2 H N N 366 TYR HH H N N 367 TYR HXT H N N 368 VAL N N N N 369 VAL CA C N S 370 VAL C C N N 371 VAL O O N N 372 VAL CB C N N 373 VAL CG1 C N N 374 VAL CG2 C N N 375 VAL OXT O N N 376 VAL H H N N 377 VAL H2 H N N 378 VAL HA H N N 379 VAL HB H N N 380 VAL HG11 H N N 381 VAL HG12 H N N 382 VAL HG13 H N N 383 VAL HG21 H N N 384 VAL HG22 H N N 385 VAL HG23 H N N 386 VAL HXT H N N 387 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 PHE N CA sing N N 235 PHE N H sing N N 236 PHE N H2 sing N N 237 PHE CA C sing N N 238 PHE CA CB sing N N 239 PHE CA HA sing N N 240 PHE C O doub N N 241 PHE C OXT sing N N 242 PHE CB CG sing N N 243 PHE CB HB2 sing N N 244 PHE CB HB3 sing N N 245 PHE CG CD1 doub Y N 246 PHE CG CD2 sing Y N 247 PHE CD1 CE1 sing Y N 248 PHE CD1 HD1 sing N N 249 PHE CD2 CE2 doub Y N 250 PHE CD2 HD2 sing N N 251 PHE CE1 CZ doub Y N 252 PHE CE1 HE1 sing N N 253 PHE CE2 CZ sing Y N 254 PHE CE2 HE2 sing N N 255 PHE CZ HZ sing N N 256 PHE OXT HXT sing N N 257 PRO N CA sing N N 258 PRO N CD sing N N 259 PRO N H sing N N 260 PRO CA C sing N N 261 PRO CA CB sing N N 262 PRO CA HA sing N N 263 PRO C O doub N N 264 PRO C OXT sing N N 265 PRO CB CG sing N N 266 PRO CB HB2 sing N N 267 PRO CB HB3 sing N N 268 PRO CG CD sing N N 269 PRO CG HG2 sing N N 270 PRO CG HG3 sing N N 271 PRO CD HD2 sing N N 272 PRO CD HD3 sing N N 273 PRO OXT HXT sing N N 274 SER N CA sing N N 275 SER N H sing N N 276 SER N H2 sing N N 277 SER CA C sing N N 278 SER CA CB sing N N 279 SER CA HA sing N N 280 SER C O doub N N 281 SER C OXT sing N N 282 SER CB OG sing N N 283 SER CB HB2 sing N N 284 SER CB HB3 sing N N 285 SER OG HG sing N N 286 SER OXT HXT sing N N 287 THR N CA sing N N 288 THR N H sing N N 289 THR N H2 sing N N 290 THR CA C sing N N 291 THR CA CB sing N N 292 THR CA HA sing N N 293 THR C O doub N N 294 THR C OXT sing N N 295 THR CB OG1 sing N N 296 THR CB CG2 sing N N 297 THR CB HB sing N N 298 THR OG1 HG1 sing N N 299 THR CG2 HG21 sing N N 300 THR CG2 HG22 sing N N 301 THR CG2 HG23 sing N N 302 THR OXT HXT sing N N 303 TRP N CA sing N N 304 TRP N H sing N N 305 TRP N H2 sing N N 306 TRP CA C sing N N 307 TRP CA CB sing N N 308 TRP CA HA sing N N 309 TRP C O doub N N 310 TRP C OXT sing N N 311 TRP CB CG sing N N 312 TRP CB HB2 sing N N 313 TRP CB HB3 sing N N 314 TRP CG CD1 doub Y N 315 TRP CG CD2 sing Y N 316 TRP CD1 NE1 sing Y N 317 TRP CD1 HD1 sing N N 318 TRP CD2 CE2 doub Y N 319 TRP CD2 CE3 sing Y N 320 TRP NE1 CE2 sing Y N 321 TRP NE1 HE1 sing N N 322 TRP CE2 CZ2 sing Y N 323 TRP CE3 CZ3 doub Y N 324 TRP CE3 HE3 sing N N 325 TRP CZ2 CH2 doub Y N 326 TRP CZ2 HZ2 sing N N 327 TRP CZ3 CH2 sing Y N 328 TRP CZ3 HZ3 sing N N 329 TRP CH2 HH2 sing N N 330 TRP OXT HXT sing N N 331 TYR N CA sing N N 332 TYR N H sing N N 333 TYR N H2 sing N N 334 TYR CA C sing N N 335 TYR CA CB sing N N 336 TYR CA HA sing N N 337 TYR C O doub N N 338 TYR C OXT sing N N 339 TYR CB CG sing N N 340 TYR CB HB2 sing N N 341 TYR CB HB3 sing N N 342 TYR CG CD1 doub Y N 343 TYR CG CD2 sing Y N 344 TYR CD1 CE1 sing Y N 345 TYR CD1 HD1 sing N N 346 TYR CD2 CE2 doub Y N 347 TYR CD2 HD2 sing N N 348 TYR CE1 CZ doub Y N 349 TYR CE1 HE1 sing N N 350 TYR CE2 CZ sing Y N 351 TYR CE2 HE2 sing N N 352 TYR CZ OH sing N N 353 TYR OH HH sing N N 354 TYR OXT HXT sing N N 355 VAL N CA sing N N 356 VAL N H sing N N 357 VAL N H2 sing N N 358 VAL CA C sing N N 359 VAL CA CB sing N N 360 VAL CA HA sing N N 361 VAL C O doub N N 362 VAL C OXT sing N N 363 VAL CB CG1 sing N N 364 VAL CB CG2 sing N N 365 VAL CB HB sing N N 366 VAL CG1 HG11 sing N N 367 VAL CG1 HG12 sing N N 368 VAL CG1 HG13 sing N N 369 VAL CG2 HG21 sing N N 370 VAL CG2 HG22 sing N N 371 VAL CG2 HG23 sing N N 372 VAL OXT HXT sing N N 373 # _atom_sites.entry_id 4RYJ _atom_sites.fract_transf_matrix[1][1] 0.029429 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.007825 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009530 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019212 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_