data_4TS0 # _entry.id 4TS0 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4TS0 pdb_00004ts0 10.2210/pdb4ts0/pdb WWPDB D_1000202182 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-07-23 2 'Structure model' 1 1 2014-08-06 3 'Structure model' 1 2 2014-10-01 4 'Structure model' 1 3 2017-11-22 5 'Structure model' 2 0 2020-07-29 6 'Structure model' 3 0 2022-04-20 7 'Structure model' 3 1 2023-12-27 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 5 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Derived calculations' 4 4 'Structure model' Other 5 4 'Structure model' 'Refinement description' 6 4 'Structure model' 'Source and taxonomy' 7 4 'Structure model' 'Structure summary' 8 5 'Structure model' Advisory 9 5 'Structure model' 'Atomic model' 10 5 'Structure model' 'Data collection' 11 5 'Structure model' 'Derived calculations' 12 5 'Structure model' 'Non-polymer description' 13 5 'Structure model' 'Refinement description' 14 5 'Structure model' 'Structure summary' 15 6 'Structure model' Advisory 16 6 'Structure model' 'Atomic model' 17 6 'Structure model' 'Data collection' 18 6 'Structure model' 'Database references' 19 6 'Structure model' 'Derived calculations' 20 6 'Structure model' 'Structure summary' 21 7 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' entity 2 4 'Structure model' pdbx_database_status 3 4 'Structure model' pdbx_entity_src_syn 4 4 'Structure model' pdbx_struct_oper_list 5 4 'Structure model' software 6 5 'Structure model' atom_site 7 5 'Structure model' atom_site_anisotrop 8 5 'Structure model' chem_comp 9 5 'Structure model' entity 10 5 'Structure model' entity_name_com 11 5 'Structure model' pdbx_branch_scheme 12 5 'Structure model' pdbx_chem_comp_identifier 13 5 'Structure model' pdbx_entity_branch 14 5 'Structure model' pdbx_entity_branch_descriptor 15 5 'Structure model' pdbx_entity_branch_link 16 5 'Structure model' pdbx_entity_branch_list 17 5 'Structure model' pdbx_entity_nonpoly 18 5 'Structure model' pdbx_molecule_features 19 5 'Structure model' pdbx_nonpoly_scheme 20 5 'Structure model' pdbx_struct_conn_angle 21 5 'Structure model' pdbx_validate_close_contact 22 5 'Structure model' refine_hist 23 5 'Structure model' struct_asym 24 5 'Structure model' struct_conn 25 5 'Structure model' struct_conn_type 26 5 'Structure model' struct_site 27 5 'Structure model' struct_site_gen 28 6 'Structure model' atom_site 29 6 'Structure model' atom_site_anisotrop 30 6 'Structure model' chem_comp 31 6 'Structure model' database_2 32 6 'Structure model' entity 33 6 'Structure model' ndb_struct_na_base_pair 34 6 'Structure model' ndb_struct_na_base_pair_step 35 6 'Structure model' pdbx_entity_nonpoly 36 6 'Structure model' pdbx_nonpoly_scheme 37 6 'Structure model' pdbx_poly_seq_scheme 38 6 'Structure model' pdbx_struct_assembly_gen 39 6 'Structure model' pdbx_struct_conn_angle 40 6 'Structure model' pdbx_unobs_or_zero_occ_residues 41 6 'Structure model' struct_asym 42 6 'Structure model' struct_conn 43 6 'Structure model' struct_ref_seq 44 7 'Structure model' chem_comp_atom 45 7 'Structure model' chem_comp_bond # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_entity.pdbx_description' 2 4 'Structure model' '_pdbx_database_status.pdb_format_compatible' 3 4 'Structure model' '_pdbx_entity_src_syn.pdbx_alt_source_flag' 4 4 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 5 4 'Structure model' '_software.classification' 6 5 'Structure model' '_atom_site.B_iso_or_equiv' 7 5 'Structure model' '_atom_site.Cartn_x' 8 5 'Structure model' '_atom_site.Cartn_y' 9 5 'Structure model' '_atom_site.Cartn_z' 10 5 'Structure model' '_atom_site.auth_asym_id' 11 5 'Structure model' '_atom_site.auth_atom_id' 12 5 'Structure model' '_atom_site.auth_comp_id' 13 5 'Structure model' '_atom_site.auth_seq_id' 14 5 'Structure model' '_atom_site.label_asym_id' 15 5 'Structure model' '_atom_site.label_atom_id' 16 5 'Structure model' '_atom_site.label_comp_id' 17 5 'Structure model' '_atom_site.label_entity_id' 18 5 'Structure model' '_atom_site.pdbx_formal_charge' 19 5 'Structure model' '_atom_site.type_symbol' 20 5 'Structure model' '_atom_site_anisotrop.id' 21 5 'Structure model' '_atom_site_anisotrop.pdbx_label_asym_id' 22 5 'Structure model' '_chem_comp.formula' 23 5 'Structure model' '_chem_comp.formula_weight' 24 5 'Structure model' '_chem_comp.id' 25 5 'Structure model' '_chem_comp.mon_nstd_flag' 26 5 'Structure model' '_chem_comp.name' 27 5 'Structure model' '_chem_comp.type' 28 5 'Structure model' '_entity.formula_weight' 29 5 'Structure model' '_entity.pdbx_description' 30 5 'Structure model' '_entity.src_method' 31 5 'Structure model' '_entity.type' 32 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 33 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 34 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 35 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 36 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 37 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 38 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 39 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id' 40 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 41 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 42 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 43 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 44 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 45 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 46 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 47 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 48 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 49 5 'Structure model' '_pdbx_struct_conn_angle.value' 50 5 'Structure model' '_pdbx_validate_close_contact.auth_asym_id_2' 51 5 'Structure model' '_pdbx_validate_close_contact.auth_comp_id_2' 52 5 'Structure model' '_pdbx_validate_close_contact.auth_seq_id_2' 53 5 'Structure model' '_refine_hist.pdbx_number_atoms_nucleic_acid' 54 5 'Structure model' '_refine_hist.pdbx_number_atoms_protein' 55 5 'Structure model' '_struct_asym.entity_id' 56 5 'Structure model' '_struct_conn_type.id' 57 6 'Structure model' '_atom_site.B_iso_or_equiv' 58 6 'Structure model' '_atom_site.Cartn_x' 59 6 'Structure model' '_atom_site.Cartn_y' 60 6 'Structure model' '_atom_site.Cartn_z' 61 6 'Structure model' '_atom_site.auth_asym_id' 62 6 'Structure model' '_atom_site.auth_atom_id' 63 6 'Structure model' '_atom_site.auth_comp_id' 64 6 'Structure model' '_atom_site.auth_seq_id' 65 6 'Structure model' '_atom_site.label_asym_id' 66 6 'Structure model' '_atom_site.label_atom_id' 67 6 'Structure model' '_atom_site.label_comp_id' 68 6 'Structure model' '_atom_site.label_entity_id' 69 6 'Structure model' '_atom_site.label_seq_id' 70 6 'Structure model' '_atom_site.pdbx_formal_charge' 71 6 'Structure model' '_atom_site.type_symbol' 72 6 'Structure model' '_atom_site_anisotrop.U[1][1]' 73 6 'Structure model' '_atom_site_anisotrop.U[1][2]' 74 6 'Structure model' '_atom_site_anisotrop.U[1][3]' 75 6 'Structure model' '_atom_site_anisotrop.U[2][2]' 76 6 'Structure model' '_atom_site_anisotrop.U[2][3]' 77 6 'Structure model' '_atom_site_anisotrop.U[3][3]' 78 6 'Structure model' '_atom_site_anisotrop.id' 79 6 'Structure model' '_atom_site_anisotrop.pdbx_auth_asym_id' 80 6 'Structure model' '_atom_site_anisotrop.pdbx_auth_atom_id' 81 6 'Structure model' '_atom_site_anisotrop.pdbx_auth_comp_id' 82 6 'Structure model' '_atom_site_anisotrop.pdbx_auth_seq_id' 83 6 'Structure model' '_atom_site_anisotrop.pdbx_label_asym_id' 84 6 'Structure model' '_atom_site_anisotrop.pdbx_label_atom_id' 85 6 'Structure model' '_atom_site_anisotrop.pdbx_label_comp_id' 86 6 'Structure model' '_atom_site_anisotrop.pdbx_label_seq_id' 87 6 'Structure model' '_atom_site_anisotrop.type_symbol' 88 6 'Structure model' '_chem_comp.pdbx_synonyms' 89 6 'Structure model' '_database_2.pdbx_DOI' 90 6 'Structure model' '_database_2.pdbx_database_accession' 91 6 'Structure model' '_pdbx_poly_seq_scheme.auth_mon_id' 92 6 'Structure model' '_pdbx_poly_seq_scheme.auth_seq_num' 93 6 'Structure model' '_pdbx_poly_seq_scheme.pdb_mon_id' 94 6 'Structure model' '_pdbx_poly_seq_scheme.pdb_seq_num' 95 6 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 96 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 97 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 98 6 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id' 99 6 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 100 6 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 101 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 102 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 103 6 'Structure model' '_pdbx_struct_conn_angle.value' 104 6 'Structure model' '_struct_ref_seq.db_align_end' 105 6 'Structure model' '_struct_ref_seq.pdbx_auth_seq_align_end' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 4TS0 _pdbx_database_status.recvd_initial_deposition_date 2014-06-18 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Warner, K.D.' 1 'Chen, M.C.' 2 'Song, W.' 3 'Strack, R.L.' 4 'Thorn, A.' 5 'Jaffrey, S.R.' 6 ;Ferre-D'Amare, A.R. ; 7 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Nat.Struct.Mol.Biol. _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1545-9985 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 21 _citation.language ? _citation.page_first 658 _citation.page_last 663 _citation.title 'Structural basis for activity of highly efficient RNA mimics of green fluorescent protein.' _citation.year 2014 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/nsmb.2865 _citation.pdbx_database_id_PubMed 25026079 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Warner, K.D.' 1 ? primary 'Chen, M.C.' 2 ? primary 'Song, W.' 3 ? primary 'Strack, R.L.' 4 ? primary 'Thorn, A.' 5 ? primary 'Jaffrey, S.R.' 6 ? primary ;Ferre-D'Amare, A.R. ; 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'Spinach RNA aptamer, bimolecular construct' 14394.598 1 ? ? ? ? 2 polymer syn 'Spinach RNA aptamer, bimolecular construct' 15220.934 1 ? ? ? ? 3 branched man 'beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose' 342.297 4 ? ? ? ? 4 non-polymer syn 'POTASSIUM ION' 39.098 10 ? ? ? ? 5 non-polymer syn 'BARIUM ION' 137.327 1 ? ? ? ? 6 non-polymer syn '(5Z)-5-(3,5-difluoro-4-hydroxybenzylidene)-2,3-dimethyl-3,5-dihydro-4H-imidazol-4-one' 252.217 1 ? ? ? ? 7 water nat water 18.015 15 ? ? ? ? # _entity_name_com.entity_id 3 _entity_name_com.name sucrose # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no yes 'GACGCGACCGAAUGAAAUGGUGAAGGACGGGUCCAGCCGGCUG(CCC)' GACGCGACCGAAUGAAAUGGUGAAGGACGGGUCCAGCCGGCUGC X ? 2 polyribonucleotide no yes 'GCAGCCGGCUUGUUGAGUAGAGUGUGAGCUCCGUAACUGGUCGCGU(CCC)' GCAGCCGGCUUGUUGAGUAGAGUGUGAGCUCCGUAACUGGUCGCGUC Y ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'POTASSIUM ION' K 5 'BARIUM ION' BA 6 '(5Z)-5-(3,5-difluoro-4-hydroxybenzylidene)-2,3-dimethyl-3,5-dihydro-4H-imidazol-4-one' 38E 7 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 A n 1 3 C n 1 4 G n 1 5 C n 1 6 G n 1 7 A n 1 8 C n 1 9 C n 1 10 G n 1 11 A n 1 12 A n 1 13 U n 1 14 G n 1 15 A n 1 16 A n 1 17 A n 1 18 U n 1 19 G n 1 20 G n 1 21 U n 1 22 G n 1 23 A n 1 24 A n 1 25 G n 1 26 G n 1 27 A n 1 28 C n 1 29 G n 1 30 G n 1 31 G n 1 32 U n 1 33 C n 1 34 C n 1 35 A n 1 36 G n 1 37 C n 1 38 C n 1 39 G n 1 40 G n 1 41 C n 1 42 U n 1 43 G n 1 44 CCC n 2 1 G n 2 2 C n 2 3 A n 2 4 G n 2 5 C n 2 6 C n 2 7 G n 2 8 G n 2 9 C n 2 10 U n 2 11 U n 2 12 G n 2 13 U n 2 14 U n 2 15 G n 2 16 A n 2 17 G n 2 18 U n 2 19 A n 2 20 G n 2 21 A n 2 22 G n 2 23 U n 2 24 G n 2 25 U n 2 26 G n 2 27 A n 2 28 G n 2 29 C n 2 30 U n 2 31 C n 2 32 C n 2 33 G n 2 34 U n 2 35 A n 2 36 A n 2 37 C n 2 38 U n 2 39 G n 2 40 G n 2 41 U n 2 42 C n 2 43 G n 2 44 C n 2 45 G n 2 46 U n 2 47 CCC n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample 1 44 'synthetic construct' ? 32630 ? 2 1 sample 1 47 'synthetic construct' ? 32630 ? # _pdbx_entity_branch.entity_id 3 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 3 DFrufb2-1DGlcpa 'Glycam Condensed Sequence' GMML 1.0 2 3 'WURCS=2.0/2,2,1/[ha122h-2b_2-5][a2122h-1a_1-5]/1-2/a2-b1' WURCS PDB2Glycan 1.1.0 3 3 '[][b-D-Fruf]{[(2+1)][a-D-Glcp]{}}' LINUCS PDB-CARE ? # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.entity_id 3 _pdbx_entity_branch_link.entity_branch_list_num_1 1 _pdbx_entity_branch_link.comp_id_1 GLC _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.entity_branch_list_num_2 2 _pdbx_entity_branch_link.comp_id_2 FRU _pdbx_entity_branch_link.atom_id_2 O2 _pdbx_entity_branch_link.leaving_atom_id_2 HO2 _pdbx_entity_branch_link.value_order sing _pdbx_entity_branch_link.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 38E non-polymer . '(5Z)-5-(3,5-difluoro-4-hydroxybenzylidene)-2,3-dimethyl-3,5-dihydro-4H-imidazol-4-one' ? 'C12 H10 F2 N2 O2' 252.217 A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 BA non-polymer . 'BARIUM ION' ? 'Ba 2' 137.327 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CCC 'RNA linking' n ;CYTIDINE-5'-PHOSPHATE-2',3'-CYCLIC PHOSPHATE ; ? 'C9 H13 N3 O10 P2' 385.161 FRU 'D-saccharide, beta linking' . beta-D-fructofuranose 'beta-D-fructose; D-fructose; fructose' 'C6 H12 O6' 180.156 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLC 'D-saccharide, alpha linking' . alpha-D-glucopyranose 'alpha-D-glucose; D-glucose; glucose' 'C6 H12 O6' 180.156 HOH non-polymer . WATER ? 'H2 O' 18.015 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier FRU 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DFrufb FRU 'COMMON NAME' GMML 1.0 b-D-fructofuranose FRU 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Fruf FRU 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Fru GLC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpa GLC 'COMMON NAME' GMML 1.0 a-D-glucopyranose GLC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Glcp GLC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Glc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1 1 G G X . n A 1 2 A 2 2 2 A A X . n A 1 3 C 3 3 3 C C X . n A 1 4 G 4 4 4 G G X . n A 1 5 C 5 5 5 C C X . n A 1 6 G 6 6 6 G G X . n A 1 7 A 7 7 7 A A X . n A 1 8 C 8 8 8 C C X . n A 1 9 C 9 9 9 C C X . n A 1 10 G 10 10 10 G G X . n A 1 11 A 11 11 11 A A X . n A 1 12 A 12 12 12 A A X . n A 1 13 U 13 13 13 U U X . n A 1 14 G 14 14 14 G G X . n A 1 15 A 15 15 15 A A X . n A 1 16 A 16 16 16 A A X . n A 1 17 A 17 17 17 A A X . n A 1 18 U 18 18 18 U U X . n A 1 19 G 19 19 19 G G X . n A 1 20 G 20 20 20 G G X . n A 1 21 U 21 21 21 U U X . n A 1 22 G 22 22 22 G G X . n A 1 23 A 23 23 23 A A X . n A 1 24 A 24 24 24 A A X . n A 1 25 G 25 25 25 G G X . n A 1 26 G 26 26 26 G G X . n A 1 27 A 27 27 27 A A X . n A 1 28 C 28 28 28 C C X . n A 1 29 G 29 29 29 G G X . n A 1 30 G 30 30 30 G G X . n A 1 31 G 31 31 31 G G X . n A 1 32 U 32 32 32 U U X . n A 1 33 C 33 33 33 C C X . n A 1 34 C 34 34 34 C C X . n A 1 35 A 35 35 35 A A X . n A 1 36 G 36 36 36 G G X . n A 1 37 C 37 37 37 C C X . n A 1 38 C 38 38 38 C C X . n A 1 39 G 39 39 39 G G X . n A 1 40 G 40 40 40 G G X . n A 1 41 C 41 41 41 C C X . n A 1 42 U 42 42 42 U U X . n A 1 43 G 43 43 43 G G X . n A 1 44 CCC 44 44 44 CCC CCC X . n B 2 1 G 1 49 49 G G Y . n B 2 2 C 2 50 50 C C Y . n B 2 3 A 3 51 51 A A Y . n B 2 4 G 4 52 52 G G Y . n B 2 5 C 5 53 53 C C Y . n B 2 6 C 6 54 54 C C Y . n B 2 7 G 7 55 55 G G Y . n B 2 8 G 8 56 56 G G Y . n B 2 9 C 9 57 57 C C Y . n B 2 10 U 10 58 58 U U Y . n B 2 11 U 11 59 59 U U Y . n B 2 12 G 12 60 60 G G Y . n B 2 13 U 13 61 61 U U Y . n B 2 14 U 14 62 62 U U Y . n B 2 15 G 15 63 63 G G Y . n B 2 16 A 16 64 64 A A Y . n B 2 17 G 17 65 65 G G Y . n B 2 18 U 18 66 66 U U Y . n B 2 19 A 19 67 67 A A Y . n B 2 20 G 20 68 68 G G Y . n B 2 21 A 21 69 69 A A Y . n B 2 22 G 22 70 70 G G Y . n B 2 23 U 23 71 71 U U Y . n B 2 24 G 24 72 72 G G Y . n B 2 25 U 25 73 73 U U Y . n B 2 26 G 26 74 74 G G Y . n B 2 27 A 27 75 75 A A Y . n B 2 28 G 28 76 76 G G Y . n B 2 29 C 29 77 77 C C Y . n B 2 30 U 30 78 78 U U Y . n B 2 31 C 31 79 79 C C Y . n B 2 32 C 32 80 80 C C Y . n B 2 33 G 33 81 81 G G Y . n B 2 34 U 34 82 82 U U Y . n B 2 35 A 35 83 83 A A Y . n B 2 36 A 36 84 84 A A Y . n B 2 37 C 37 85 85 C C Y . n B 2 38 U 38 86 86 U U Y . n B 2 39 G 39 87 87 G G Y . n B 2 40 G 40 88 88 G G Y . n B 2 41 U 41 89 89 U U Y . n B 2 42 C 42 90 90 C C Y . n B 2 43 G 43 91 91 G G Y . n B 2 44 C 44 92 92 C C Y . n B 2 45 G 45 93 93 G G Y . n B 2 46 U 46 94 94 U U Y . n B 2 47 CCC 47 101 95 CCC CCC Y . n # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero C 3 GLC 1 A GLC 1 A SUC 303 n C 3 FRU 2 A FRU 2 A SUC 303 n D 3 GLC 1 B GLC 1 A SUC 302 n D 3 FRU 2 B FRU 2 A SUC 302 n E 3 GLC 1 C GLC 1 A SUC 301 n E 3 FRU 2 C FRU 2 A SUC 301 n F 3 GLC 1 D GLC 1 A SUC 304 n F 3 FRU 2 D FRU 2 A SUC 304 n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 K 1 101 208 K K X . H 4 K 1 102 253 K K X . I 4 K 1 103 252 K K X . J 4 K 1 104 251 K K X . K 4 K 1 105 1 K K X . L 5 BA 1 106 201 BA BA X . M 4 K 1 201 202 K K Y . N 4 K 1 202 255 K K Y . O 4 K 1 203 203 K K Y . P 4 K 1 204 204 K K Y . Q 4 K 1 205 254 K K Y . R 6 38E 1 206 1 38E XDF Y . S 7 HOH 1 201 13 HOH HOH X . S 7 HOH 2 202 16 HOH HOH X . S 7 HOH 3 203 2 HOH HOH X . S 7 HOH 4 204 5 HOH HOH X . S 7 HOH 5 205 8 HOH HOH X . S 7 HOH 6 206 14 HOH HOH X . S 7 HOH 7 207 10 HOH HOH X . T 7 HOH 1 301 11 HOH HOH Y . T 7 HOH 2 302 9 HOH HOH Y . T 7 HOH 3 303 4 HOH HOH Y . T 7 HOH 4 304 15 HOH HOH Y . T 7 HOH 5 305 6 HOH HOH Y . T 7 HOH 6 306 7 HOH HOH Y . T 7 HOH 7 307 3 HOH HOH Y . T 7 HOH 8 308 12 HOH HOH Y . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 X A 11 ? N9 ? A A 11 N9 2 1 Y 1 X A 11 ? C8 ? A A 11 C8 3 1 Y 1 X A 11 ? N7 ? A A 11 N7 4 1 Y 1 X A 11 ? C5 ? A A 11 C5 5 1 Y 1 X A 11 ? C6 ? A A 11 C6 6 1 Y 1 X A 11 ? N6 ? A A 11 N6 7 1 Y 1 X A 11 ? N1 ? A A 11 N1 8 1 Y 1 X A 11 ? C2 ? A A 11 C2 9 1 Y 1 X A 11 ? N3 ? A A 11 N3 10 1 Y 1 X A 11 ? C4 ? A A 11 C4 11 1 Y 1 X U 13 ? N1 ? A U 13 N1 12 1 Y 1 X U 13 ? C2 ? A U 13 C2 13 1 Y 1 X U 13 ? O2 ? A U 13 O2 14 1 Y 1 X U 13 ? N3 ? A U 13 N3 15 1 Y 1 X U 13 ? C4 ? A U 13 C4 16 1 Y 1 X U 13 ? O4 ? A U 13 O4 17 1 Y 1 X U 13 ? C5 ? A U 13 C5 18 1 Y 1 X U 13 ? C6 ? A U 13 C6 19 1 Y 1 Y U 58 ? N1 ? B U 10 N1 20 1 Y 1 Y U 58 ? C2 ? B U 10 C2 21 1 Y 1 Y U 58 ? O2 ? B U 10 O2 22 1 Y 1 Y U 58 ? N3 ? B U 10 N3 23 1 Y 1 Y U 58 ? C4 ? B U 10 C4 24 1 Y 1 Y U 58 ? O4 ? B U 10 O4 25 1 Y 1 Y U 58 ? C5 ? B U 10 C5 26 1 Y 1 Y U 58 ? C6 ? B U 10 C6 # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0069 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.14 3 # _cell.length_a 39.760 _cell.length_b 49.500 _cell.length_c 186.260 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 4TS0 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4TS0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 4TS0 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.09 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 60.19 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '20% PEG 3350, 0.25M NaCl, 0.1M succinate-K pH 7.0, 15% sucrose' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2013-08-16 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5498 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ALS BEAMLINE 5.0.2' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.5498 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 5.0.2 _diffrn_source.pdbx_synchrotron_site ALS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 4TS0 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.5 _reflns.d_resolution_low 93.1 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 9193 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.0 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 11.9 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 19.0 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _refine.aniso_B[1][1] 1.8000 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][2] 0.0700 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] -1.8700 _refine.B_iso_max 228.400 _refine.B_iso_mean 84.5660 _refine.B_iso_min 45.230 _refine.correlation_coeff_Fo_to_Fc 0.9520 _refine.correlation_coeff_Fo_to_Fc_free 0.9400 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : WITH TLS ADDED' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 4TS0 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.8000 _refine.ls_d_res_low 50.0000 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 9646 _refine.ls_number_reflns_R_free 453 _refine.ls_number_reflns_R_work 9193 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.9300 _refine.ls_percent_reflns_R_free 4.7000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2076 _refine.ls_R_factor_R_free 0.2387 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2061 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details MASK _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.8790 _refine.pdbx_overall_ESU_R_Free 0.3220 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 26.8630 _refine.overall_SU_ML 0.2520 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 2.8000 _refine_hist.d_res_low 50.0000 _refine_hist.pdbx_number_atoms_ligand 144 _refine_hist.number_atoms_solvent 15 _refine_hist.number_atoms_total 2068 _refine_hist.pdbx_number_residues_total 90 _refine_hist.pdbx_B_iso_mean_ligand 106.36 _refine_hist.pdbx_B_iso_mean_solvent 70.97 _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 1909 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.008 0.012 2277 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.003 0.020 950 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.958 1.395 3547 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.547 3.000 2321 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 0.099 0.200 397 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.011 0.020 1092 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 485 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? 5.551 6.326 2277 ? r_scbond_it ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.8000 _refine_ls_shell.d_res_low 2.8730 _refine_ls_shell.number_reflns_all 698 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 40 _refine_ls_shell.number_reflns_R_work 658 _refine_ls_shell.percent_reflns_obs 100.0000 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.5150 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.4470 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? # _struct.entry_id 4TS0 _struct.title 'Crystal structure of the Spinach RNA aptamer in complex with DFHBI, barium ions' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 4TS0 _struct_keywords.text 'aptamer, fluorescence, G-quadruplex, RNA' _struct_keywords.pdbx_keywords RNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 4 ? H N N 4 ? I N N 4 ? J N N 4 ? K N N 4 ? L N N 5 ? M N N 4 ? N N N 4 ? O N N 4 ? P N N 4 ? Q N N 4 ? R N N 6 ? S N N 7 ? T N N 7 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 4TS0 4TS0 ? 1 ? 1 2 PDB 4TS0 4TS0 ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4TS0 X 1 ? 44 ? 4TS0 1 ? 44 ? 1 44 2 2 4TS0 Y 1 ? 47 ? 4TS0 49 ? 101 ? 49 101 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 10170 ? 1 MORE -60 ? 1 'SSA (A^2)' 14690 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A G 43 "O3'" ? ? ? 1_555 A CCC 44 P ? ? X G 43 X CCC 44 1_555 ? ? ? ? ? ? ? 1.588 ? ? covale2 covale both ? B U 46 "O3'" ? ? ? 1_555 B CCC 47 P ? ? Y U 94 Y CCC 101 1_555 ? ? ? ? ? ? ? 1.585 ? ? covale3 covale both ? C GLC . C1 ? ? ? 1_555 C FRU . O2 ? ? A GLC 1 A FRU 2 1_555 ? ? ? ? ? ? ? 1.433 ? ? covale4 covale both ? D GLC . C1 ? ? ? 1_555 D FRU . O2 ? ? B GLC 1 B FRU 2 1_555 ? ? ? ? ? ? ? 1.445 ? ? covale5 covale both ? E GLC . C1 ? ? ? 1_555 E FRU . O2 ? ? C GLC 1 C FRU 2 1_555 ? ? ? ? ? ? ? 1.451 ? ? covale6 covale both ? F GLC . C1 ? ? ? 1_555 F FRU . O2 ? ? D GLC 1 D FRU 2 1_555 ? ? ? ? ? ? ? 1.462 ? ? metalc1 metalc ? ? A G 14 "O2'" ? ? ? 1_555 J K . K ? ? X G 14 X K 104 1_555 ? ? ? ? ? ? ? 2.917 ? ? metalc2 metalc ? ? A A 16 OP1 ? ? ? 1_555 J K . K ? ? X A 16 X K 104 1_555 ? ? ? ? ? ? ? 2.751 ? ? metalc3 metalc ? ? A U 18 O4 ? ? ? 1_555 J K . K ? ? X U 18 X K 104 1_555 ? ? ? ? ? ? ? 2.889 ? ? metalc4 metalc ? ? A G 20 O6 ? ? ? 1_555 L BA . BA ? ? X G 20 X BA 106 1_555 ? ? ? ? ? ? ? 3.076 ? ? metalc5 metalc ? ? A A 23 OP2 ? ? ? 1_555 I K . K ? ? X A 23 X K 103 1_555 ? ? ? ? ? ? ? 3.256 ? ? metalc6 metalc ? ? A G 25 O6 ? ? ? 1_555 G K . K ? ? X G 25 X K 101 1_555 ? ? ? ? ? ? ? 3.037 ? ? metalc7 metalc ? ? A G 25 "O3'" ? ? ? 1_555 K K . K ? ? X G 25 X K 105 1_555 ? ? ? ? ? ? ? 3.260 ? ? metalc8 metalc ? ? A G 25 "O2'" ? ? ? 1_555 K K . K ? ? X G 25 X K 105 1_555 ? ? ? ? ? ? ? 3.037 ? ? metalc9 metalc ? ? A G 25 O6 ? ? ? 1_555 M K . K ? ? X G 25 Y K 201 1_555 ? ? ? ? ? ? ? 2.748 ? ? metalc10 metalc ? ? A G 26 O6 ? ? ? 1_555 G K . K ? ? X G 26 X K 101 1_555 ? ? ? ? ? ? ? 2.555 ? ? metalc11 metalc ? ? A G 26 OP2 ? ? ? 1_555 K K . K ? ? X G 26 X K 105 1_555 ? ? ? ? ? ? ? 3.048 ? ? metalc12 metalc ? ? A G 26 OP2 ? ? ? 1_555 N K . K ? ? X G 26 Y K 202 1_555 ? ? ? ? ? ? ? 2.877 ? ? metalc13 metalc ? ? A G 26 "O5'" ? ? ? 1_555 N K . K ? ? X G 26 Y K 202 1_555 ? ? ? ? ? ? ? 3.372 ? ? metalc14 metalc ? ? A G 29 O6 ? ? ? 1_555 G K . K ? ? X G 29 X K 101 1_555 ? ? ? ? ? ? ? 3.156 ? ? metalc15 metalc ? ? A G 29 O6 ? ? ? 1_555 M K . K ? ? X G 29 Y K 201 1_555 ? ? ? ? ? ? ? 3.455 ? ? metalc16 metalc ? ? A G 30 O6 ? ? ? 1_555 G K . K ? ? X G 30 X K 101 1_555 ? ? ? ? ? ? ? 2.764 ? ? metalc17 metalc ? ? G K . K ? ? ? 1_555 B G 17 O6 ? ? X K 101 Y G 65 1_555 ? ? ? ? ? ? ? 2.862 ? ? metalc18 metalc ? ? G K . K ? ? ? 1_555 B G 20 O6 ? ? X K 101 Y G 68 1_555 ? ? ? ? ? ? ? 2.645 ? ? metalc19 metalc ? ? G K . K ? ? ? 1_555 B G 22 O6 ? ? X K 101 Y G 70 1_555 ? ? ? ? ? ? ? 2.729 ? ? metalc20 metalc ? ? G K . K ? ? ? 1_555 B G 24 O6 ? ? X K 101 Y G 72 1_555 ? ? ? ? ? ? ? 2.930 ? ? metalc21 metalc ? ? H K . K ? ? ? 1_555 S HOH . O ? ? X K 102 X HOH 203 1_555 ? ? ? ? ? ? ? 2.053 ? ? metalc22 metalc ? ? H K . K ? ? ? 1_555 T HOH . O ? ? X K 102 Y HOH 307 1_555 ? ? ? ? ? ? ? 2.450 ? ? metalc23 metalc ? ? I K . K ? ? ? 1_555 S HOH . O ? ? X K 103 X HOH 205 1_555 ? ? ? ? ? ? ? 2.951 ? ? metalc24 metalc ? ? I K . K ? ? ? 1_555 S HOH . O ? ? X K 103 X HOH 207 1_555 ? ? ? ? ? ? ? 2.269 ? ? metalc25 metalc ? ? I K . K ? ? ? 1_555 T HOH . O ? ? X K 103 Y HOH 301 1_555 ? ? ? ? ? ? ? 3.399 ? ? metalc26 metalc ? ? I K . K ? ? ? 1_555 T HOH . O ? ? X K 103 Y HOH 302 1_555 ? ? ? ? ? ? ? 2.648 ? ? metalc27 metalc ? ? K K . K ? ? ? 1_555 T HOH . O ? ? X K 105 Y HOH 304 1_555 ? ? ? ? ? ? ? 2.833 ? ? metalc28 metalc ? ? K K . K ? ? ? 1_555 T HOH . O ? ? X K 105 Y HOH 305 1_555 ? ? ? ? ? ? ? 2.647 ? ? metalc29 metalc ? ? K K . K ? ? ? 1_555 T HOH . O ? ? X K 105 Y HOH 306 1_555 ? ? ? ? ? ? ? 3.404 ? ? metalc30 metalc ? ? L BA . BA ? ? ? 1_555 B U 30 O4 ? ? X BA 106 Y U 78 1_555 ? ? ? ? ? ? ? 2.948 ? ? metalc31 metalc ? ? B G 8 O6 ? ? ? 1_555 Q K . K ? ? Y G 56 Y K 205 1_555 ? ? ? ? ? ? ? 3.428 ? ? metalc32 metalc ? ? B U 13 "O3'" ? ? ? 1_555 N K . K ? ? Y U 61 Y K 202 1_555 ? ? ? ? ? ? ? 3.065 ? ? metalc33 metalc ? ? B U 13 "O2'" ? ? ? 1_555 N K . K ? ? Y U 61 Y K 202 1_555 ? ? ? ? ? ? ? 2.499 ? ? metalc34 metalc ? ? B U 14 OP2 ? ? ? 1_555 N K . K ? ? Y U 62 Y K 202 1_555 ? ? ? ? ? ? ? 3.129 ? ? metalc35 metalc ? ? B G 20 O6 ? ? ? 1_555 M K . K ? ? Y G 68 Y K 201 1_555 ? ? ? ? ? ? ? 2.841 ? ? metalc36 metalc ? ? B G 24 O6 ? ? ? 1_555 M K . K ? ? Y G 72 Y K 201 1_555 ? ? ? ? ? ? ? 3.065 ? ? metalc37 metalc ? ? B U 25 "O2'" ? ? ? 1_555 M K . K ? ? Y U 73 Y K 201 1_555 ? ? ? ? ? ? ? 2.895 ? ? metalc38 metalc ? ? B U 25 O2 ? ? ? 1_555 M K . K ? ? Y U 73 Y K 201 1_555 ? ? ? ? ? ? ? 2.659 ? ? metalc39 metalc ? ? B G 26 O6 ? ? ? 1_555 M K . K ? ? Y G 74 Y K 201 1_555 ? ? ? ? ? ? ? 3.077 ? ? metalc40 metalc ? ? B A 36 OP1 ? ? ? 1_555 P K . K ? ? Y A 84 Y K 204 1_555 ? ? ? ? ? ? ? 2.828 ? ? metalc41 metalc ? ? B U 38 O4 ? ? ? 1_555 O K . K ? ? Y U 86 Y K 203 1_555 ? ? ? ? ? ? ? 3.014 ? ? metalc42 metalc ? ? B G 39 O6 ? ? ? 1_555 O K . K ? ? Y G 87 Y K 203 1_555 ? ? ? ? ? ? ? 3.070 ? ? metalc43 metalc ? ? N K . K ? ? ? 1_555 T HOH . O ? ? Y K 202 Y HOH 305 1_555 ? ? ? ? ? ? ? 2.918 ? ? metalc44 metalc ? ? N K . K ? ? ? 1_555 T HOH . O ? ? Y K 202 Y HOH 306 1_555 ? ? ? ? ? ? ? 2.403 ? ? metalc45 metalc ? ? P K . K ? ? ? 4_465 F FRU . O6 ? ? Y K 204 D FRU 2 1_555 ? ? ? ? ? ? ? 2.624 ? ? hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 B CCC 47 N3 ? ? X G 1 Y CCC 101 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 B CCC 47 O2 ? ? X G 1 Y CCC 101 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 B CCC 47 N4 ? ? X G 1 Y CCC 101 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A A 2 N1 ? ? ? 1_555 B U 46 N3 ? ? X A 2 Y U 94 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A A 2 N6 ? ? ? 1_555 B U 46 O4 ? ? X A 2 Y U 94 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A C 3 N3 ? ? ? 1_555 B G 45 N1 ? ? X C 3 Y G 93 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A C 3 N4 ? ? ? 1_555 B G 45 O6 ? ? X C 3 Y G 93 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A C 3 O2 ? ? ? 1_555 B G 45 N2 ? ? X C 3 Y G 93 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A G 4 N1 ? ? ? 1_555 B C 44 N3 ? ? X G 4 Y C 92 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A G 4 N2 ? ? ? 1_555 B C 44 O2 ? ? X G 4 Y C 92 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A G 4 O6 ? ? ? 1_555 B C 44 N4 ? ? X G 4 Y C 92 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A C 5 N3 ? ? ? 1_555 B G 43 N1 ? ? X C 5 Y G 91 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A C 5 N4 ? ? ? 1_555 B G 43 O6 ? ? X C 5 Y G 91 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A C 5 O2 ? ? ? 1_555 B G 43 N2 ? ? X C 5 Y G 91 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A G 6 N1 ? ? ? 1_555 B C 42 N3 ? ? X G 6 Y C 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A G 6 N2 ? ? ? 1_555 B C 42 O2 ? ? X G 6 Y C 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A G 6 O6 ? ? ? 1_555 B C 42 N4 ? ? X G 6 Y C 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A A 7 N1 ? ? ? 1_555 B U 41 N3 ? ? X A 7 Y U 89 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A A 7 N6 ? ? ? 1_555 B U 41 O4 ? ? X A 7 Y U 89 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A C 8 N3 ? ? ? 1_555 B G 40 N1 ? ? X C 8 Y G 88 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A C 8 N4 ? ? ? 1_555 B G 40 O6 ? ? X C 8 Y G 88 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A C 8 O2 ? ? ? 1_555 B G 40 N2 ? ? X C 8 Y G 88 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A C 9 N3 ? ? ? 1_555 B G 39 N1 ? ? X C 9 Y G 87 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A C 9 N4 ? ? ? 1_555 B G 39 O6 ? ? X C 9 Y G 87 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A C 9 O2 ? ? ? 1_555 B G 39 N2 ? ? X C 9 Y G 87 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A G 10 N1 ? ? ? 1_555 A G 14 O6 ? ? X G 10 X G 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog27 hydrog ? ? A G 10 N2 ? ? ? 1_555 A G 14 N7 ? ? X G 10 X G 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog28 hydrog ? ? A G 10 O6 ? ? ? 1_555 B C 37 N4 ? ? X G 10 Y C 85 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog29 hydrog ? ? A A 12 N1 ? ? ? 1_555 B U 38 N3 ? ? X A 12 Y U 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A A 12 N6 ? ? ? 1_555 B U 38 O4 ? ? X A 12 Y U 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A G 14 N1 ? ? ? 1_555 B C 37 N3 ? ? X G 14 Y C 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A G 14 N2 ? ? ? 1_555 B C 37 O2 ? ? X G 14 Y C 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A G 14 O6 ? ? ? 1_555 B C 37 N4 ? ? X G 14 Y C 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A A 17 N1 ? ? ? 1_555 B U 34 N3 ? ? X A 17 Y U 82 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A A 17 N6 ? ? ? 1_555 B U 34 O4 ? ? X A 17 Y U 82 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A A 17 N3 ? ? ? 1_555 B A 36 N6 ? ? X A 17 Y A 84 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? hydrog37 hydrog ? ? A U 18 O2 ? ? ? 1_555 B G 33 N1 ? ? X U 18 Y G 81 1_555 ? ? ? ? ? ? 'U-G MISPAIR' ? ? ? hydrog38 hydrog ? ? A G 19 N1 ? ? ? 1_555 B C 32 N3 ? ? X G 19 Y C 80 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A G 19 N2 ? ? ? 1_555 B C 32 O2 ? ? X G 19 Y C 80 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A G 19 O6 ? ? ? 1_555 B C 32 N4 ? ? X G 19 Y C 80 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A G 20 N1 ? ? ? 1_555 B C 31 N3 ? ? X G 20 Y C 79 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A G 20 N2 ? ? ? 1_555 B C 31 O2 ? ? X G 20 Y C 79 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A G 20 O6 ? ? ? 1_555 B C 31 N4 ? ? X G 20 Y C 79 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A U 21 N3 ? ? ? 1_555 B U 30 O2 ? ? X U 21 Y U 78 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog45 hydrog ? ? A U 21 O4 ? ? ? 1_555 B U 30 N3 ? ? X U 21 Y U 78 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog46 hydrog ? ? A G 22 N1 ? ? ? 1_555 B C 29 N3 ? ? X G 22 Y C 77 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A G 22 N2 ? ? ? 1_555 B C 29 O2 ? ? X G 22 Y C 77 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A G 22 O6 ? ? ? 1_555 B C 29 N4 ? ? X G 22 Y C 77 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A A 23 N1 ? ? ? 1_555 B G 28 N1 ? ? X A 23 Y G 76 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog50 hydrog ? ? A A 23 N6 ? ? ? 1_555 B G 28 O6 ? ? X A 23 Y G 76 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog51 hydrog ? ? A A 24 N1 ? ? ? 1_555 B A 27 N6 ? ? X A 24 Y A 75 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? hydrog52 hydrog ? ? A G 25 N1 ? ? ? 1_555 A G 29 O6 ? ? X G 25 X G 29 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog53 hydrog ? ? A G 25 N2 ? ? ? 1_555 A G 29 N7 ? ? X G 25 X G 29 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog54 hydrog ? ? A G 25 N7 ? ? ? 1_555 B G 20 N2 ? ? X G 25 Y G 68 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog55 hydrog ? ? A G 25 O6 ? ? ? 1_555 B G 20 N1 ? ? X G 25 Y G 68 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog56 hydrog ? ? A G 26 N1 ? ? ? 1_555 A G 30 O6 ? ? X G 26 X G 30 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog57 hydrog ? ? A G 26 N2 ? ? ? 1_555 A G 30 N7 ? ? X G 26 X G 30 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog58 hydrog ? ? A G 26 N7 ? ? ? 1_555 B G 17 N2 ? ? X G 26 Y G 65 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog59 hydrog ? ? A G 26 O6 ? ? ? 1_555 B G 17 N1 ? ? X G 26 Y G 65 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog60 hydrog ? ? A C 28 N4 ? ? ? 1_555 B U 18 O4 ? ? X C 28 Y U 66 1_555 ? ? ? ? ? ? 'C-U MISPAIR' ? ? ? hydrog61 hydrog ? ? A C 28 N3 ? ? ? 1_555 B G 26 N1 ? ? X C 28 Y G 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? A C 28 N4 ? ? ? 1_555 B G 26 O6 ? ? X C 28 Y G 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? A C 28 O2 ? ? ? 1_555 B G 26 N2 ? ? X C 28 Y G 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? A G 29 N1 ? ? ? 1_555 B G 24 O6 ? ? X G 29 Y G 72 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog65 hydrog ? ? A G 29 N2 ? ? ? 1_555 B G 24 N7 ? ? X G 29 Y G 72 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog66 hydrog ? ? A G 30 N1 ? ? ? 1_555 B G 22 O6 ? ? X G 30 Y G 70 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog67 hydrog ? ? A G 30 N2 ? ? ? 1_555 B G 22 N7 ? ? X G 30 Y G 70 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog68 hydrog ? ? A U 32 N3 ? ? ? 1_555 B A 16 N1 ? ? X U 32 Y A 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? A U 32 O4 ? ? ? 1_555 B A 16 N6 ? ? X U 32 Y A 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? A C 33 N3 ? ? ? 1_555 B G 15 N1 ? ? X C 33 Y G 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? A C 33 N4 ? ? ? 1_555 B G 15 O6 ? ? X C 33 Y G 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? A C 33 O2 ? ? ? 1_555 B G 15 N2 ? ? X C 33 Y G 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? A C 34 N3 ? ? ? 1_555 B G 12 N1 ? ? X C 34 Y G 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? A C 34 N4 ? ? ? 1_555 B G 12 O6 ? ? X C 34 Y G 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? A C 34 O2 ? ? ? 1_555 B G 12 N2 ? ? X C 34 Y G 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? A A 35 N1 ? ? ? 1_555 B U 11 N3 ? ? X A 35 Y U 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? A A 35 N6 ? ? ? 1_555 B U 11 O4 ? ? X A 35 Y U 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? A G 36 N1 ? ? ? 1_555 B C 9 N3 ? ? X G 36 Y C 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog79 hydrog ? ? A G 36 N2 ? ? ? 1_555 B C 9 O2 ? ? X G 36 Y C 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog80 hydrog ? ? A G 36 O6 ? ? ? 1_555 B C 9 N4 ? ? X G 36 Y C 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog81 hydrog ? ? A C 37 N3 ? ? ? 1_555 B G 8 N1 ? ? X C 37 Y G 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? A C 37 N4 ? ? ? 1_555 B G 8 O6 ? ? X C 37 Y G 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? A C 37 O2 ? ? ? 1_555 B G 8 N2 ? ? X C 37 Y G 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? A C 38 N3 ? ? ? 1_555 B G 7 N1 ? ? X C 38 Y G 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog85 hydrog ? ? A C 38 N4 ? ? ? 1_555 B G 7 O6 ? ? X C 38 Y G 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog86 hydrog ? ? A C 38 O2 ? ? ? 1_555 B G 7 N2 ? ? X C 38 Y G 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog87 hydrog ? ? A G 39 N1 ? ? ? 1_555 B C 6 N3 ? ? X G 39 Y C 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog88 hydrog ? ? A G 39 N2 ? ? ? 1_555 B C 6 O2 ? ? X G 39 Y C 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog89 hydrog ? ? A G 39 O6 ? ? ? 1_555 B C 6 N4 ? ? X G 39 Y C 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog90 hydrog ? ? A G 40 N1 ? ? ? 1_555 B C 5 N3 ? ? X G 40 Y C 53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog91 hydrog ? ? A G 40 N2 ? ? ? 1_555 B C 5 O2 ? ? X G 40 Y C 53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog92 hydrog ? ? A G 40 O6 ? ? ? 1_555 B C 5 N4 ? ? X G 40 Y C 53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog93 hydrog ? ? A C 41 N3 ? ? ? 1_555 B G 4 N1 ? ? X C 41 Y G 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog94 hydrog ? ? A C 41 N4 ? ? ? 1_555 B G 4 O6 ? ? X C 41 Y G 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog95 hydrog ? ? A C 41 O2 ? ? ? 1_555 B G 4 N2 ? ? X C 41 Y G 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog96 hydrog ? ? A U 42 N3 ? ? ? 1_555 B A 3 N1 ? ? X U 42 Y A 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog97 hydrog ? ? A U 42 O4 ? ? ? 1_555 B A 3 N6 ? ? X U 42 Y A 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog98 hydrog ? ? A G 43 N1 ? ? ? 1_555 B C 2 N3 ? ? X G 43 Y C 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog99 hydrog ? ? A G 43 N2 ? ? ? 1_555 B C 2 O2 ? ? X G 43 Y C 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog100 hydrog ? ? A G 43 O6 ? ? ? 1_555 B C 2 N4 ? ? X G 43 Y C 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog101 hydrog ? ? A CCC 44 N3 ? ? ? 1_555 B G 1 N1 ? ? X CCC 44 Y G 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog102 hydrog ? ? A CCC 44 N4 ? ? ? 1_555 B G 1 O6 ? ? X CCC 44 Y G 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog103 hydrog ? ? A CCC 44 O2 ? ? ? 1_555 B G 1 N2 ? ? X CCC 44 Y G 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog104 hydrog ? ? B U 13 N3 ? ? ? 1_555 B A 16 N7 ? ? Y U 61 Y A 64 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? hydrog105 hydrog ? ? B U 13 O4 ? ? ? 1_555 B A 16 N6 ? ? Y U 61 Y A 64 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? hydrog106 hydrog ? ? B G 17 N7 ? ? ? 1_555 B G 22 N2 ? ? Y G 65 Y G 70 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog107 hydrog ? ? B G 17 O6 ? ? ? 1_555 B G 22 N1 ? ? Y G 65 Y G 70 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog108 hydrog ? ? B U 18 O2 ? ? ? 1_555 B U 25 N3 ? ? Y U 66 Y U 73 1_555 ? ? ? ? ? ? 'U-U MISPAIR' ? ? ? hydrog109 hydrog ? ? B G 20 N7 ? ? ? 1_555 B G 24 N2 ? ? Y G 68 Y G 72 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog110 hydrog ? ? B G 20 O6 ? ? ? 1_555 B G 24 N1 ? ? Y G 68 Y G 72 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 "O2'" ? A G 14 ? X G 14 ? 1_555 K ? J K . ? X K 104 ? 1_555 OP1 ? A A 16 ? X A 16 ? 1_555 69.4 ? 2 "O2'" ? A G 14 ? X G 14 ? 1_555 K ? J K . ? X K 104 ? 1_555 O4 ? A U 18 ? X U 18 ? 1_555 145.9 ? 3 OP1 ? A A 16 ? X A 16 ? 1_555 K ? J K . ? X K 104 ? 1_555 O4 ? A U 18 ? X U 18 ? 1_555 112.7 ? 4 O6 ? A G 20 ? X G 20 ? 1_555 BA ? L BA . ? X BA 106 ? 1_555 O4 ? B U 30 ? Y U 78 ? 1_555 74.7 ? 5 OP2 ? A A 23 ? X A 23 ? 1_555 K ? I K . ? X K 103 ? 1_555 O ? S HOH . ? X HOH 205 ? 1_555 87.5 ? 6 OP2 ? A A 23 ? X A 23 ? 1_555 K ? I K . ? X K 103 ? 1_555 O ? S HOH . ? X HOH 207 ? 1_555 118.1 ? 7 O ? S HOH . ? X HOH 205 ? 1_555 K ? I K . ? X K 103 ? 1_555 O ? S HOH . ? X HOH 207 ? 1_555 63.9 ? 8 OP2 ? A A 23 ? X A 23 ? 1_555 K ? I K . ? X K 103 ? 1_555 O ? T HOH . ? Y HOH 301 ? 1_555 142.3 ? 9 O ? S HOH . ? X HOH 205 ? 1_555 K ? I K . ? X K 103 ? 1_555 O ? T HOH . ? Y HOH 301 ? 1_555 114.2 ? 10 O ? S HOH . ? X HOH 207 ? 1_555 K ? I K . ? X K 103 ? 1_555 O ? T HOH . ? Y HOH 301 ? 1_555 55.8 ? 11 OP2 ? A A 23 ? X A 23 ? 1_555 K ? I K . ? X K 103 ? 1_555 O ? T HOH . ? Y HOH 302 ? 1_555 136.5 ? 12 O ? S HOH . ? X HOH 205 ? 1_555 K ? I K . ? X K 103 ? 1_555 O ? T HOH . ? Y HOH 302 ? 1_555 106.1 ? 13 O ? S HOH . ? X HOH 207 ? 1_555 K ? I K . ? X K 103 ? 1_555 O ? T HOH . ? Y HOH 302 ? 1_555 104.8 ? 14 O ? T HOH . ? Y HOH 301 ? 1_555 K ? I K . ? X K 103 ? 1_555 O ? T HOH . ? Y HOH 302 ? 1_555 69.2 ? 15 O6 ? A G 25 ? X G 25 ? 1_555 K ? G K . ? X K 101 ? 1_555 O6 ? A G 26 ? X G 26 ? 1_555 85.4 ? 16 O6 ? A G 25 ? X G 25 ? 1_555 K ? G K . ? X K 101 ? 1_555 O6 ? A G 29 ? X G 29 ? 1_555 63.9 ? 17 O6 ? A G 26 ? X G 26 ? 1_555 K ? G K . ? X K 101 ? 1_555 O6 ? A G 29 ? X G 29 ? 1_555 89.0 ? 18 O6 ? A G 25 ? X G 25 ? 1_555 K ? G K . ? X K 101 ? 1_555 O6 ? A G 30 ? X G 30 ? 1_555 135.1 ? 19 O6 ? A G 26 ? X G 26 ? 1_555 K ? G K . ? X K 101 ? 1_555 O6 ? A G 30 ? X G 30 ? 1_555 77.6 ? 20 O6 ? A G 29 ? X G 29 ? 1_555 K ? G K . ? X K 101 ? 1_555 O6 ? A G 30 ? X G 30 ? 1_555 74.5 ? 21 O6 ? A G 25 ? X G 25 ? 1_555 K ? G K . ? X K 101 ? 1_555 O6 ? B G 17 ? Y G 65 ? 1_555 95.7 ? 22 O6 ? A G 26 ? X G 26 ? 1_555 K ? G K . ? X K 101 ? 1_555 O6 ? B G 17 ? Y G 65 ? 1_555 71.2 ? 23 O6 ? A G 29 ? X G 29 ? 1_555 K ? G K . ? X K 101 ? 1_555 O6 ? B G 17 ? Y G 65 ? 1_555 153.1 ? 24 O6 ? A G 30 ? X G 30 ? 1_555 K ? G K . ? X K 101 ? 1_555 O6 ? B G 17 ? Y G 65 ? 1_555 116.7 ? 25 O6 ? A G 25 ? X G 25 ? 1_555 K ? G K . ? X K 101 ? 1_555 O6 ? B G 20 ? Y G 68 ? 1_555 60.3 ? 26 O6 ? A G 26 ? X G 26 ? 1_555 K ? G K . ? X K 101 ? 1_555 O6 ? B G 20 ? Y G 68 ? 1_555 127.1 ? 27 O6 ? A G 29 ? X G 29 ? 1_555 K ? G K . ? X K 101 ? 1_555 O6 ? B G 20 ? Y G 68 ? 1_555 107.0 ? 28 O6 ? A G 30 ? X G 30 ? 1_555 K ? G K . ? X K 101 ? 1_555 O6 ? B G 20 ? Y G 68 ? 1_555 154.8 ? 29 O6 ? B G 17 ? Y G 65 ? 1_555 K ? G K . ? X K 101 ? 1_555 O6 ? B G 20 ? Y G 68 ? 1_555 73.7 ? 30 O6 ? A G 25 ? X G 25 ? 1_555 K ? G K . ? X K 101 ? 1_555 O6 ? B G 22 ? Y G 70 ? 1_555 144.1 ? 31 O6 ? A G 26 ? X G 26 ? 1_555 K ? G K . ? X K 101 ? 1_555 O6 ? B G 22 ? Y G 70 ? 1_555 116.1 ? 32 O6 ? A G 29 ? X G 29 ? 1_555 K ? G K . ? X K 101 ? 1_555 O6 ? B G 22 ? Y G 70 ? 1_555 138.9 ? 33 O6 ? A G 30 ? X G 30 ? 1_555 K ? G K . ? X K 101 ? 1_555 O6 ? B G 22 ? Y G 70 ? 1_555 79.7 ? 34 O6 ? B G 17 ? Y G 65 ? 1_555 K ? G K . ? X K 101 ? 1_555 O6 ? B G 22 ? Y G 70 ? 1_555 67.8 ? 35 O6 ? B G 20 ? Y G 68 ? 1_555 K ? G K . ? X K 101 ? 1_555 O6 ? B G 22 ? Y G 70 ? 1_555 84.2 ? 36 O6 ? A G 25 ? X G 25 ? 1_555 K ? G K . ? X K 101 ? 1_555 O6 ? B G 24 ? Y G 72 ? 1_555 98.3 ? 37 O6 ? A G 26 ? X G 26 ? 1_555 K ? G K . ? X K 101 ? 1_555 O6 ? B G 24 ? Y G 72 ? 1_555 155.7 ? 38 O6 ? A G 29 ? X G 29 ? 1_555 K ? G K . ? X K 101 ? 1_555 O6 ? B G 24 ? Y G 72 ? 1_555 71.6 ? 39 O6 ? A G 30 ? X G 30 ? 1_555 K ? G K . ? X K 101 ? 1_555 O6 ? B G 24 ? Y G 72 ? 1_555 83.0 ? 40 O6 ? B G 17 ? Y G 65 ? 1_555 K ? G K . ? X K 101 ? 1_555 O6 ? B G 24 ? Y G 72 ? 1_555 131.7 ? 41 O6 ? B G 20 ? Y G 68 ? 1_555 K ? G K . ? X K 101 ? 1_555 O6 ? B G 24 ? Y G 72 ? 1_555 74.0 ? 42 O6 ? B G 22 ? Y G 70 ? 1_555 K ? G K . ? X K 101 ? 1_555 O6 ? B G 24 ? Y G 72 ? 1_555 74.1 ? 43 "O3'" ? A G 25 ? X G 25 ? 1_555 K ? K K . ? X K 105 ? 1_555 "O2'" ? A G 25 ? X G 25 ? 1_555 49.4 ? 44 "O3'" ? A G 25 ? X G 25 ? 1_555 K ? K K . ? X K 105 ? 1_555 OP2 ? A G 26 ? X G 26 ? 1_555 48.0 ? 45 "O2'" ? A G 25 ? X G 25 ? 1_555 K ? K K . ? X K 105 ? 1_555 OP2 ? A G 26 ? X G 26 ? 1_555 95.4 ? 46 "O3'" ? A G 25 ? X G 25 ? 1_555 K ? K K . ? X K 105 ? 1_555 O ? T HOH . ? Y HOH 304 ? 1_555 120.2 ? 47 "O2'" ? A G 25 ? X G 25 ? 1_555 K ? K K . ? X K 105 ? 1_555 O ? T HOH . ? Y HOH 304 ? 1_555 70.8 ? 48 OP2 ? A G 26 ? X G 26 ? 1_555 K ? K K . ? X K 105 ? 1_555 O ? T HOH . ? Y HOH 304 ? 1_555 161.8 ? 49 "O3'" ? A G 25 ? X G 25 ? 1_555 K ? K K . ? X K 105 ? 1_555 O ? T HOH . ? Y HOH 305 ? 1_555 106.7 ? 50 "O2'" ? A G 25 ? X G 25 ? 1_555 K ? K K . ? X K 105 ? 1_555 O ? T HOH . ? Y HOH 305 ? 1_555 129.5 ? 51 OP2 ? A G 26 ? X G 26 ? 1_555 K ? K K . ? X K 105 ? 1_555 O ? T HOH . ? Y HOH 305 ? 1_555 88.4 ? 52 O ? T HOH . ? Y HOH 304 ? 1_555 K ? K K . ? X K 105 ? 1_555 O ? T HOH . ? Y HOH 305 ? 1_555 109.5 ? 53 "O3'" ? A G 25 ? X G 25 ? 1_555 K ? K K . ? X K 105 ? 1_555 O ? T HOH . ? Y HOH 306 ? 1_555 104.6 ? 54 "O2'" ? A G 25 ? X G 25 ? 1_555 K ? K K . ? X K 105 ? 1_555 O ? T HOH . ? Y HOH 306 ? 1_555 152.7 ? 55 OP2 ? A G 26 ? X G 26 ? 1_555 K ? K K . ? X K 105 ? 1_555 O ? T HOH . ? Y HOH 306 ? 1_555 57.5 ? 56 O ? T HOH . ? Y HOH 304 ? 1_555 K ? K K . ? X K 105 ? 1_555 O ? T HOH . ? Y HOH 306 ? 1_555 134.7 ? 57 O ? T HOH . ? Y HOH 305 ? 1_555 K ? K K . ? X K 105 ? 1_555 O ? T HOH . ? Y HOH 306 ? 1_555 59.0 ? 58 O6 ? A G 25 ? X G 25 ? 1_555 K ? M K . ? Y K 201 ? 1_555 O6 ? A G 29 ? X G 29 ? 1_555 62.6 ? 59 O6 ? A G 25 ? X G 25 ? 1_555 K ? M K . ? Y K 201 ? 1_555 O6 ? B G 20 ? Y G 68 ? 1_555 61.8 ? 60 O6 ? A G 29 ? X G 29 ? 1_555 K ? M K . ? Y K 201 ? 1_555 O6 ? B G 20 ? Y G 68 ? 1_555 95.3 ? 61 O6 ? A G 25 ? X G 25 ? 1_555 K ? M K . ? Y K 201 ? 1_555 O6 ? B G 24 ? Y G 72 ? 1_555 101.8 ? 62 O6 ? A G 29 ? X G 29 ? 1_555 K ? M K . ? Y K 201 ? 1_555 O6 ? B G 24 ? Y G 72 ? 1_555 66.0 ? 63 O6 ? B G 20 ? Y G 68 ? 1_555 K ? M K . ? Y K 201 ? 1_555 O6 ? B G 24 ? Y G 72 ? 1_555 69.3 ? 64 O6 ? A G 25 ? X G 25 ? 1_555 K ? M K . ? Y K 201 ? 1_555 "O2'" ? B U 25 ? Y U 73 ? 1_555 150.6 ? 65 O6 ? A G 29 ? X G 29 ? 1_555 K ? M K . ? Y K 201 ? 1_555 "O2'" ? B U 25 ? Y U 73 ? 1_555 142.8 ? 66 O6 ? B G 20 ? Y G 68 ? 1_555 K ? M K . ? Y K 201 ? 1_555 "O2'" ? B U 25 ? Y U 73 ? 1_555 95.1 ? 67 O6 ? B G 24 ? Y G 72 ? 1_555 K ? M K . ? Y K 201 ? 1_555 "O2'" ? B U 25 ? Y U 73 ? 1_555 84.7 ? 68 O6 ? A G 25 ? X G 25 ? 1_555 K ? M K . ? Y K 201 ? 1_555 O2 ? B U 25 ? Y U 73 ? 1_555 86.1 ? 69 O6 ? A G 29 ? X G 29 ? 1_555 K ? M K . ? Y K 201 ? 1_555 O2 ? B U 25 ? Y U 73 ? 1_555 148.6 ? 70 O6 ? B G 20 ? Y G 68 ? 1_555 K ? M K . ? Y K 201 ? 1_555 O2 ? B U 25 ? Y U 73 ? 1_555 68.4 ? 71 O6 ? B G 24 ? Y G 72 ? 1_555 K ? M K . ? Y K 201 ? 1_555 O2 ? B U 25 ? Y U 73 ? 1_555 126.2 ? 72 "O2'" ? B U 25 ? Y U 73 ? 1_555 K ? M K . ? Y K 201 ? 1_555 O2 ? B U 25 ? Y U 73 ? 1_555 67.6 ? 73 O6 ? A G 25 ? X G 25 ? 1_555 K ? M K . ? Y K 201 ? 1_555 O6 ? B G 26 ? Y G 74 ? 1_555 97.5 ? 74 O6 ? A G 29 ? X G 29 ? 1_555 K ? M K . ? Y K 201 ? 1_555 O6 ? B G 26 ? Y G 74 ? 1_555 55.0 ? 75 O6 ? B G 20 ? Y G 68 ? 1_555 K ? M K . ? Y K 201 ? 1_555 O6 ? B G 26 ? Y G 74 ? 1_555 150.2 ? 76 O6 ? B G 24 ? Y G 72 ? 1_555 K ? M K . ? Y K 201 ? 1_555 O6 ? B G 26 ? Y G 74 ? 1_555 96.9 ? 77 "O2'" ? B U 25 ? Y U 73 ? 1_555 K ? M K . ? Y K 201 ? 1_555 O6 ? B G 26 ? Y G 74 ? 1_555 110.2 ? 78 O2 ? B U 25 ? Y U 73 ? 1_555 K ? M K . ? Y K 201 ? 1_555 O6 ? B G 26 ? Y G 74 ? 1_555 135.2 ? 79 OP2 ? A G 26 ? X G 26 ? 1_555 K ? N K . ? Y K 202 ? 1_555 "O5'" ? A G 26 ? X G 26 ? 1_555 47.7 ? 80 OP2 ? A G 26 ? X G 26 ? 1_555 K ? N K . ? Y K 202 ? 1_555 "O3'" ? B U 13 ? Y U 61 ? 1_555 167.1 ? 81 "O5'" ? A G 26 ? X G 26 ? 1_555 K ? N K . ? Y K 202 ? 1_555 "O3'" ? B U 13 ? Y U 61 ? 1_555 136.5 ? 82 OP2 ? A G 26 ? X G 26 ? 1_555 K ? N K . ? Y K 202 ? 1_555 "O2'" ? B U 13 ? Y U 61 ? 1_555 141.2 ? 83 "O5'" ? A G 26 ? X G 26 ? 1_555 K ? N K . ? Y K 202 ? 1_555 "O2'" ? B U 13 ? Y U 61 ? 1_555 98.0 ? 84 "O3'" ? B U 13 ? Y U 61 ? 1_555 K ? N K . ? Y K 202 ? 1_555 "O2'" ? B U 13 ? Y U 61 ? 1_555 50.2 ? 85 OP2 ? A G 26 ? X G 26 ? 1_555 K ? N K . ? Y K 202 ? 1_555 OP2 ? B U 14 ? Y U 62 ? 1_555 120.4 ? 86 "O5'" ? A G 26 ? X G 26 ? 1_555 K ? N K . ? Y K 202 ? 1_555 OP2 ? B U 14 ? Y U 62 ? 1_555 123.7 ? 87 "O3'" ? B U 13 ? Y U 61 ? 1_555 K ? N K . ? Y K 202 ? 1_555 OP2 ? B U 14 ? Y U 62 ? 1_555 46.7 ? 88 "O2'" ? B U 13 ? Y U 61 ? 1_555 K ? N K . ? Y K 202 ? 1_555 OP2 ? B U 14 ? Y U 62 ? 1_555 92.2 ? 89 OP2 ? A G 26 ? X G 26 ? 1_555 K ? N K . ? Y K 202 ? 1_555 O ? T HOH . ? Y HOH 305 ? 1_555 86.8 ? 90 "O5'" ? A G 26 ? X G 26 ? 1_555 K ? N K . ? Y K 202 ? 1_555 O ? T HOH . ? Y HOH 305 ? 1_555 90.7 ? 91 "O3'" ? B U 13 ? Y U 61 ? 1_555 K ? N K . ? Y K 202 ? 1_555 O ? T HOH . ? Y HOH 305 ? 1_555 104.5 ? 92 "O2'" ? B U 13 ? Y U 61 ? 1_555 K ? N K . ? Y K 202 ? 1_555 O ? T HOH . ? Y HOH 305 ? 1_555 74.5 ? 93 OP2 ? B U 14 ? Y U 62 ? 1_555 K ? N K . ? Y K 202 ? 1_555 O ? T HOH . ? Y HOH 305 ? 1_555 145.0 ? 94 OP2 ? A G 26 ? X G 26 ? 1_555 K ? N K . ? Y K 202 ? 1_555 O ? T HOH . ? Y HOH 306 ? 1_555 71.7 ? 95 "O5'" ? A G 26 ? X G 26 ? 1_555 K ? N K . ? Y K 202 ? 1_555 O ? T HOH . ? Y HOH 306 ? 1_555 117.4 ? 96 "O3'" ? B U 13 ? Y U 61 ? 1_555 K ? N K . ? Y K 202 ? 1_555 O ? T HOH . ? Y HOH 306 ? 1_555 106.1 ? 97 "O2'" ? B U 13 ? Y U 61 ? 1_555 K ? N K . ? Y K 202 ? 1_555 O ? T HOH . ? Y HOH 306 ? 1_555 128.4 ? 98 OP2 ? B U 14 ? Y U 62 ? 1_555 K ? N K . ? Y K 202 ? 1_555 O ? T HOH . ? Y HOH 306 ? 1_555 97.0 ? 99 O ? T HOH . ? Y HOH 305 ? 1_555 K ? N K . ? Y K 202 ? 1_555 O ? T HOH . ? Y HOH 306 ? 1_555 69.2 ? 100 O ? S HOH . ? X HOH 203 ? 1_555 K ? H K . ? X K 102 ? 1_555 O ? T HOH . ? Y HOH 307 ? 1_555 158.5 ? 101 OP1 ? B A 36 ? Y A 84 ? 1_555 K ? P K . ? Y K 204 ? 1_555 O6 ? F FRU . ? D FRU 2 ? 1_555 61.0 ? 102 O4 ? B U 38 ? Y U 86 ? 1_555 K ? O K . ? Y K 203 ? 1_555 O6 ? B G 39 ? Y G 87 ? 1_555 73.7 ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 N3 _pdbx_validate_close_contact.auth_asym_id_1 X _pdbx_validate_close_contact.auth_comp_id_1 G _pdbx_validate_close_contact.auth_seq_id_1 19 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O6 _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 GLC _pdbx_validate_close_contact.auth_seq_id_2 1 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.12 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 "O5'" _pdbx_validate_rmsd_angle.auth_asym_id_1 X _pdbx_validate_rmsd_angle.auth_comp_id_1 G _pdbx_validate_rmsd_angle.auth_seq_id_1 20 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 P _pdbx_validate_rmsd_angle.auth_asym_id_2 X _pdbx_validate_rmsd_angle.auth_comp_id_2 G _pdbx_validate_rmsd_angle.auth_seq_id_2 20 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 OP2 _pdbx_validate_rmsd_angle.auth_asym_id_3 X _pdbx_validate_rmsd_angle.auth_comp_id_3 G _pdbx_validate_rmsd_angle.auth_seq_id_3 20 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 99.91 _pdbx_validate_rmsd_angle.angle_target_value 105.70 _pdbx_validate_rmsd_angle.angle_deviation -5.79 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.90 _pdbx_validate_rmsd_angle.linker_flag N # _pdbx_molecule_features.prd_id PRD_900003 _pdbx_molecule_features.name sucrose _pdbx_molecule_features.type Oligosaccharide _pdbx_molecule_features.class Nutrient _pdbx_molecule_features.details 'oligosaccharide with reducing-end-to-reducing-end glycosidic bond' # loop_ _pdbx_molecule.instance_id _pdbx_molecule.prd_id _pdbx_molecule.asym_id 1 PRD_900003 C 2 PRD_900003 D 3 PRD_900003 E 4 PRD_900003 F # _pdbx_refine_tls.id 1 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 37.6314 _pdbx_refine_tls.origin_y 26.8959 _pdbx_refine_tls.origin_z 1.4246 _pdbx_refine_tls.T[1][1] 0.1893 _pdbx_refine_tls.T[1][1]_esd ? _pdbx_refine_tls.T[1][2] -0.0030 _pdbx_refine_tls.T[1][2]_esd ? _pdbx_refine_tls.T[1][3] -0.0453 _pdbx_refine_tls.T[1][3]_esd ? _pdbx_refine_tls.T[2][2] 0.3340 _pdbx_refine_tls.T[2][2]_esd ? _pdbx_refine_tls.T[2][3] -0.0870 _pdbx_refine_tls.T[2][3]_esd ? _pdbx_refine_tls.T[3][3] 0.3067 _pdbx_refine_tls.T[3][3]_esd ? _pdbx_refine_tls.L[1][1] 0.8627 _pdbx_refine_tls.L[1][1]_esd ? _pdbx_refine_tls.L[1][2] 0.1651 _pdbx_refine_tls.L[1][2]_esd ? _pdbx_refine_tls.L[1][3] -0.3961 _pdbx_refine_tls.L[1][3]_esd ? _pdbx_refine_tls.L[2][2] 0.3815 _pdbx_refine_tls.L[2][2]_esd ? _pdbx_refine_tls.L[2][3] 0.0446 _pdbx_refine_tls.L[2][3]_esd ? _pdbx_refine_tls.L[3][3] 0.2468 _pdbx_refine_tls.L[3][3]_esd ? _pdbx_refine_tls.S[1][1] 0.0228 _pdbx_refine_tls.S[1][1]_esd ? _pdbx_refine_tls.S[1][2] 0.1952 _pdbx_refine_tls.S[1][2]_esd ? _pdbx_refine_tls.S[1][3] -0.2094 _pdbx_refine_tls.S[1][3]_esd ? _pdbx_refine_tls.S[2][1] 0.0904 _pdbx_refine_tls.S[2][1]_esd ? _pdbx_refine_tls.S[2][2] 0.0152 _pdbx_refine_tls.S[2][2]_esd ? _pdbx_refine_tls.S[2][3] -0.2876 _pdbx_refine_tls.S[2][3]_esd ? _pdbx_refine_tls.S[3][1] 0.0089 _pdbx_refine_tls.S[3][1]_esd ? _pdbx_refine_tls.S[3][2] -0.1189 _pdbx_refine_tls.S[3][2]_esd ? _pdbx_refine_tls.S[3][3] -0.0380 _pdbx_refine_tls.S[3][3]_esd ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? X 1 ? ? X 44 ? ? 2 'X-RAY DIFFRACTION' 1 ? ? Y 49 ? ? Y 94 ? ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 38E F1 F N N 1 38E C2 C Y N 2 38E C1 C Y N 3 38E O1 O N N 4 38E C3 C Y N 5 38E C4 C Y N 6 38E C5 C Y N 7 38E C C Y N 8 38E F F N N 9 38E C6 C N N 10 38E C7 C N N 11 38E C9 C N N 12 38E O O N N 13 38E N1 N N N 14 38E C10 C N N 15 38E C8 C N N 16 38E N N N N 17 38E C11 C N N 18 38E H1 H N N 19 38E H2 H N N 20 38E H3 H N N 21 38E H4 H N N 22 38E H5 H N N 23 38E H6 H N N 24 38E H7 H N N 25 38E H8 H N N 26 38E H9 H N N 27 38E H10 H N N 28 A OP3 O N N 29 A P P N N 30 A OP1 O N N 31 A OP2 O N N 32 A "O5'" O N N 33 A "C5'" C N N 34 A "C4'" C N R 35 A "O4'" O N N 36 A "C3'" C N S 37 A "O3'" O N N 38 A "C2'" C N R 39 A "O2'" O N N 40 A "C1'" C N R 41 A N9 N Y N 42 A C8 C Y N 43 A N7 N Y N 44 A C5 C Y N 45 A C6 C Y N 46 A N6 N N N 47 A N1 N Y N 48 A C2 C Y N 49 A N3 N Y N 50 A C4 C Y N 51 A HOP3 H N N 52 A HOP2 H N N 53 A "H5'" H N N 54 A "H5''" H N N 55 A "H4'" H N N 56 A "H3'" H N N 57 A "HO3'" H N N 58 A "H2'" H N N 59 A "HO2'" H N N 60 A "H1'" H N N 61 A H8 H N N 62 A H61 H N N 63 A H62 H N N 64 A H2 H N N 65 BA BA BA N N 66 C OP3 O N N 67 C P P N N 68 C OP1 O N N 69 C OP2 O N N 70 C "O5'" O N N 71 C "C5'" C N N 72 C "C4'" C N R 73 C "O4'" O N N 74 C "C3'" C N S 75 C "O3'" O N N 76 C "C2'" C N R 77 C "O2'" O N N 78 C "C1'" C N R 79 C N1 N N N 80 C C2 C N N 81 C O2 O N N 82 C N3 N N N 83 C C4 C N N 84 C N4 N N N 85 C C5 C N N 86 C C6 C N N 87 C HOP3 H N N 88 C HOP2 H N N 89 C "H5'" H N N 90 C "H5''" H N N 91 C "H4'" H N N 92 C "H3'" H N N 93 C "HO3'" H N N 94 C "H2'" H N N 95 C "HO2'" H N N 96 C "H1'" H N N 97 C H41 H N N 98 C H42 H N N 99 C H5 H N N 100 C H6 H N N 101 CCC PC P N S 102 CCC O1C O N N 103 CCC O2C O N N 104 CCC P P N N 105 CCC OP1 O N N 106 CCC OP2 O N N 107 CCC OP3 O N N 108 CCC "O5'" O N N 109 CCC "C5'" C N N 110 CCC "C4'" C N R 111 CCC "O4'" O N N 112 CCC "C3'" C N R 113 CCC "O3'" O N N 114 CCC "C2'" C N R 115 CCC "O2'" O N N 116 CCC "C1'" C N R 117 CCC N1 N N N 118 CCC C2 C N N 119 CCC O2 O N N 120 CCC N3 N N N 121 CCC C4 C N N 122 CCC N4 N N N 123 CCC C5 C N N 124 CCC C6 C N N 125 CCC HOC2 H N N 126 CCC HOP2 H N N 127 CCC HOP3 H N N 128 CCC "H5'" H N N 129 CCC "H5''" H N N 130 CCC "H4'" H N N 131 CCC "H3'" H N N 132 CCC "H2'" H N N 133 CCC "H1'" H N N 134 CCC H41 H N N 135 CCC H42 H N N 136 CCC H5 H N N 137 CCC H6 H N N 138 FRU C1 C N N 139 FRU C2 C N R 140 FRU C3 C N S 141 FRU C4 C N S 142 FRU C5 C N R 143 FRU C6 C N N 144 FRU O1 O N N 145 FRU O2 O N N 146 FRU O3 O N N 147 FRU O4 O N N 148 FRU O5 O N N 149 FRU O6 O N N 150 FRU H11 H N N 151 FRU H12 H N N 152 FRU H3 H N N 153 FRU H4 H N N 154 FRU H5 H N N 155 FRU H61 H N N 156 FRU H62 H N N 157 FRU HO1 H N N 158 FRU HO2 H N N 159 FRU HO3 H N N 160 FRU HO4 H N N 161 FRU HO6 H N N 162 G OP3 O N N 163 G P P N N 164 G OP1 O N N 165 G OP2 O N N 166 G "O5'" O N N 167 G "C5'" C N N 168 G "C4'" C N R 169 G "O4'" O N N 170 G "C3'" C N S 171 G "O3'" O N N 172 G "C2'" C N R 173 G "O2'" O N N 174 G "C1'" C N R 175 G N9 N Y N 176 G C8 C Y N 177 G N7 N Y N 178 G C5 C Y N 179 G C6 C N N 180 G O6 O N N 181 G N1 N N N 182 G C2 C N N 183 G N2 N N N 184 G N3 N N N 185 G C4 C Y N 186 G HOP3 H N N 187 G HOP2 H N N 188 G "H5'" H N N 189 G "H5''" H N N 190 G "H4'" H N N 191 G "H3'" H N N 192 G "HO3'" H N N 193 G "H2'" H N N 194 G "HO2'" H N N 195 G "H1'" H N N 196 G H8 H N N 197 G H1 H N N 198 G H21 H N N 199 G H22 H N N 200 GLC C1 C N S 201 GLC C2 C N R 202 GLC C3 C N S 203 GLC C4 C N S 204 GLC C5 C N R 205 GLC C6 C N N 206 GLC O1 O N N 207 GLC O2 O N N 208 GLC O3 O N N 209 GLC O4 O N N 210 GLC O5 O N N 211 GLC O6 O N N 212 GLC H1 H N N 213 GLC H2 H N N 214 GLC H3 H N N 215 GLC H4 H N N 216 GLC H5 H N N 217 GLC H61 H N N 218 GLC H62 H N N 219 GLC HO1 H N N 220 GLC HO2 H N N 221 GLC HO3 H N N 222 GLC HO4 H N N 223 GLC HO6 H N N 224 HOH O O N N 225 HOH H1 H N N 226 HOH H2 H N N 227 K K K N N 228 U OP3 O N N 229 U P P N N 230 U OP1 O N N 231 U OP2 O N N 232 U "O5'" O N N 233 U "C5'" C N N 234 U "C4'" C N R 235 U "O4'" O N N 236 U "C3'" C N S 237 U "O3'" O N N 238 U "C2'" C N R 239 U "O2'" O N N 240 U "C1'" C N R 241 U N1 N N N 242 U C2 C N N 243 U O2 O N N 244 U N3 N N N 245 U C4 C N N 246 U O4 O N N 247 U C5 C N N 248 U C6 C N N 249 U HOP3 H N N 250 U HOP2 H N N 251 U "H5'" H N N 252 U "H5''" H N N 253 U "H4'" H N N 254 U "H3'" H N N 255 U "HO3'" H N N 256 U "H2'" H N N 257 U "HO2'" H N N 258 U "H1'" H N N 259 U H3 H N N 260 U H5 H N N 261 U H6 H N N 262 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 38E O C9 doub N N 1 38E F C sing N N 2 38E C5 C doub Y N 3 38E C5 C4 sing Y N 4 38E C6 C4 sing N N 5 38E C6 C7 doub N Z 6 38E C9 C7 sing N N 7 38E C9 N1 sing N N 8 38E C C1 sing Y N 9 38E C4 C3 doub Y N 10 38E C7 N sing N N 11 38E C10 N1 sing N N 12 38E N1 C8 sing N N 13 38E C1 O1 sing N N 14 38E C1 C2 doub Y N 15 38E C3 C2 sing Y N 16 38E N C8 doub N N 17 38E C8 C11 sing N N 18 38E C2 F1 sing N N 19 38E O1 H1 sing N N 20 38E C3 H2 sing N N 21 38E C5 H3 sing N N 22 38E C6 H4 sing N N 23 38E C10 H5 sing N N 24 38E C10 H6 sing N N 25 38E C10 H7 sing N N 26 38E C11 H8 sing N N 27 38E C11 H9 sing N N 28 38E C11 H10 sing N N 29 A OP3 P sing N N 30 A OP3 HOP3 sing N N 31 A P OP1 doub N N 32 A P OP2 sing N N 33 A P "O5'" sing N N 34 A OP2 HOP2 sing N N 35 A "O5'" "C5'" sing N N 36 A "C5'" "C4'" sing N N 37 A "C5'" "H5'" sing N N 38 A "C5'" "H5''" sing N N 39 A "C4'" "O4'" sing N N 40 A "C4'" "C3'" sing N N 41 A "C4'" "H4'" sing N N 42 A "O4'" "C1'" sing N N 43 A "C3'" "O3'" sing N N 44 A "C3'" "C2'" sing N N 45 A "C3'" "H3'" sing N N 46 A "O3'" "HO3'" sing N N 47 A "C2'" "O2'" sing N N 48 A "C2'" "C1'" sing N N 49 A "C2'" "H2'" sing N N 50 A "O2'" "HO2'" sing N N 51 A "C1'" N9 sing N N 52 A "C1'" "H1'" sing N N 53 A N9 C8 sing Y N 54 A N9 C4 sing Y N 55 A C8 N7 doub Y N 56 A C8 H8 sing N N 57 A N7 C5 sing Y N 58 A C5 C6 sing Y N 59 A C5 C4 doub Y N 60 A C6 N6 sing N N 61 A C6 N1 doub Y N 62 A N6 H61 sing N N 63 A N6 H62 sing N N 64 A N1 C2 sing Y N 65 A C2 N3 doub Y N 66 A C2 H2 sing N N 67 A N3 C4 sing Y N 68 C OP3 P sing N N 69 C OP3 HOP3 sing N N 70 C P OP1 doub N N 71 C P OP2 sing N N 72 C P "O5'" sing N N 73 C OP2 HOP2 sing N N 74 C "O5'" "C5'" sing N N 75 C "C5'" "C4'" sing N N 76 C "C5'" "H5'" sing N N 77 C "C5'" "H5''" sing N N 78 C "C4'" "O4'" sing N N 79 C "C4'" "C3'" sing N N 80 C "C4'" "H4'" sing N N 81 C "O4'" "C1'" sing N N 82 C "C3'" "O3'" sing N N 83 C "C3'" "C2'" sing N N 84 C "C3'" "H3'" sing N N 85 C "O3'" "HO3'" sing N N 86 C "C2'" "O2'" sing N N 87 C "C2'" "C1'" sing N N 88 C "C2'" "H2'" sing N N 89 C "O2'" "HO2'" sing N N 90 C "C1'" N1 sing N N 91 C "C1'" "H1'" sing N N 92 C N1 C2 sing N N 93 C N1 C6 sing N N 94 C C2 O2 doub N N 95 C C2 N3 sing N N 96 C N3 C4 doub N N 97 C C4 N4 sing N N 98 C C4 C5 sing N N 99 C N4 H41 sing N N 100 C N4 H42 sing N N 101 C C5 C6 doub N N 102 C C5 H5 sing N N 103 C C6 H6 sing N N 104 CCC PC O1C doub N N 105 CCC PC O2C sing N N 106 CCC PC "O3'" sing N N 107 CCC PC "O2'" sing N N 108 CCC O2C HOC2 sing N N 109 CCC P OP1 doub N N 110 CCC P OP2 sing N N 111 CCC P OP3 sing N N 112 CCC P "O5'" sing N N 113 CCC OP2 HOP2 sing N N 114 CCC OP3 HOP3 sing N N 115 CCC "O5'" "C5'" sing N N 116 CCC "C5'" "C4'" sing N N 117 CCC "C5'" "H5'" sing N N 118 CCC "C5'" "H5''" sing N N 119 CCC "C4'" "O4'" sing N N 120 CCC "C4'" "C3'" sing N N 121 CCC "C4'" "H4'" sing N N 122 CCC "O4'" "C1'" sing N N 123 CCC "C3'" "O3'" sing N N 124 CCC "C3'" "C2'" sing N N 125 CCC "C3'" "H3'" sing N N 126 CCC "C2'" "O2'" sing N N 127 CCC "C2'" "C1'" sing N N 128 CCC "C2'" "H2'" sing N N 129 CCC "C1'" N1 sing N N 130 CCC "C1'" "H1'" sing N N 131 CCC N1 C2 sing N N 132 CCC N1 C6 sing N N 133 CCC C2 O2 doub N N 134 CCC C2 N3 sing N N 135 CCC N3 C4 doub N N 136 CCC C4 N4 sing N N 137 CCC C4 C5 sing N N 138 CCC N4 H41 sing N N 139 CCC N4 H42 sing N N 140 CCC C5 C6 doub N N 141 CCC C5 H5 sing N N 142 CCC C6 H6 sing N N 143 FRU C1 C2 sing N N 144 FRU C1 O1 sing N N 145 FRU C1 H11 sing N N 146 FRU C1 H12 sing N N 147 FRU C2 C3 sing N N 148 FRU C2 O2 sing N N 149 FRU C2 O5 sing N N 150 FRU C3 C4 sing N N 151 FRU C3 O3 sing N N 152 FRU C3 H3 sing N N 153 FRU C4 C5 sing N N 154 FRU C4 O4 sing N N 155 FRU C4 H4 sing N N 156 FRU C5 C6 sing N N 157 FRU C5 O5 sing N N 158 FRU C5 H5 sing N N 159 FRU C6 O6 sing N N 160 FRU C6 H61 sing N N 161 FRU C6 H62 sing N N 162 FRU O1 HO1 sing N N 163 FRU O2 HO2 sing N N 164 FRU O3 HO3 sing N N 165 FRU O4 HO4 sing N N 166 FRU O6 HO6 sing N N 167 G OP3 P sing N N 168 G OP3 HOP3 sing N N 169 G P OP1 doub N N 170 G P OP2 sing N N 171 G P "O5'" sing N N 172 G OP2 HOP2 sing N N 173 G "O5'" "C5'" sing N N 174 G "C5'" "C4'" sing N N 175 G "C5'" "H5'" sing N N 176 G "C5'" "H5''" sing N N 177 G "C4'" "O4'" sing N N 178 G "C4'" "C3'" sing N N 179 G "C4'" "H4'" sing N N 180 G "O4'" "C1'" sing N N 181 G "C3'" "O3'" sing N N 182 G "C3'" "C2'" sing N N 183 G "C3'" "H3'" sing N N 184 G "O3'" "HO3'" sing N N 185 G "C2'" "O2'" sing N N 186 G "C2'" "C1'" sing N N 187 G "C2'" "H2'" sing N N 188 G "O2'" "HO2'" sing N N 189 G "C1'" N9 sing N N 190 G "C1'" "H1'" sing N N 191 G N9 C8 sing Y N 192 G N9 C4 sing Y N 193 G C8 N7 doub Y N 194 G C8 H8 sing N N 195 G N7 C5 sing Y N 196 G C5 C6 sing N N 197 G C5 C4 doub Y N 198 G C6 O6 doub N N 199 G C6 N1 sing N N 200 G N1 C2 sing N N 201 G N1 H1 sing N N 202 G C2 N2 sing N N 203 G C2 N3 doub N N 204 G N2 H21 sing N N 205 G N2 H22 sing N N 206 G N3 C4 sing N N 207 GLC C1 C2 sing N N 208 GLC C1 O1 sing N N 209 GLC C1 O5 sing N N 210 GLC C1 H1 sing N N 211 GLC C2 C3 sing N N 212 GLC C2 O2 sing N N 213 GLC C2 H2 sing N N 214 GLC C3 C4 sing N N 215 GLC C3 O3 sing N N 216 GLC C3 H3 sing N N 217 GLC C4 C5 sing N N 218 GLC C4 O4 sing N N 219 GLC C4 H4 sing N N 220 GLC C5 C6 sing N N 221 GLC C5 O5 sing N N 222 GLC C5 H5 sing N N 223 GLC C6 O6 sing N N 224 GLC C6 H61 sing N N 225 GLC C6 H62 sing N N 226 GLC O1 HO1 sing N N 227 GLC O2 HO2 sing N N 228 GLC O3 HO3 sing N N 229 GLC O4 HO4 sing N N 230 GLC O6 HO6 sing N N 231 HOH O H1 sing N N 232 HOH O H2 sing N N 233 U OP3 P sing N N 234 U OP3 HOP3 sing N N 235 U P OP1 doub N N 236 U P OP2 sing N N 237 U P "O5'" sing N N 238 U OP2 HOP2 sing N N 239 U "O5'" "C5'" sing N N 240 U "C5'" "C4'" sing N N 241 U "C5'" "H5'" sing N N 242 U "C5'" "H5''" sing N N 243 U "C4'" "O4'" sing N N 244 U "C4'" "C3'" sing N N 245 U "C4'" "H4'" sing N N 246 U "O4'" "C1'" sing N N 247 U "C3'" "O3'" sing N N 248 U "C3'" "C2'" sing N N 249 U "C3'" "H3'" sing N N 250 U "O3'" "HO3'" sing N N 251 U "C2'" "O2'" sing N N 252 U "C2'" "C1'" sing N N 253 U "C2'" "H2'" sing N N 254 U "O2'" "HO2'" sing N N 255 U "C1'" N1 sing N N 256 U "C1'" "H1'" sing N N 257 U N1 C2 sing N N 258 U N1 C6 sing N N 259 U C2 O2 doub N N 260 U C2 N3 sing N N 261 U N3 C4 sing N N 262 U N3 H3 sing N N 263 U C4 O4 doub N N 264 U C4 C5 sing N N 265 U C5 C6 doub N N 266 U C5 H5 sing N N 267 U C6 H6 sing N N 268 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4TS0 'double helix' 4TS0 'a-form double helix' 4TS0 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 B CCC 47 1_555 -0.016 -0.191 0.386 -1.000 -4.936 -6.943 1 X_G1:CCC101_Y X 1 ? Y 101 ? 19 1 1 A A 2 1_555 B U 46 1_555 -0.047 0.295 0.249 0.446 -13.584 4.956 2 X_A2:U94_Y X 2 ? Y 94 ? 20 1 1 A C 3 1_555 B G 45 1_555 -0.083 -0.030 0.255 4.037 -14.655 -3.284 3 X_C3:G93_Y X 3 ? Y 93 ? 19 1 1 A G 4 1_555 B C 44 1_555 0.029 -0.154 0.259 -3.543 -14.346 -0.977 4 X_G4:C92_Y X 4 ? Y 92 ? 19 1 1 A C 5 1_555 B G 43 1_555 -0.041 -0.085 0.279 1.380 -12.530 2.974 5 X_C5:G91_Y X 5 ? Y 91 ? 19 1 1 A G 6 1_555 B C 42 1_555 -0.119 -0.129 0.337 1.361 -7.447 -0.673 6 X_G6:C90_Y X 6 ? Y 90 ? 19 1 1 A A 7 1_555 B U 41 1_555 -0.367 -0.297 0.157 5.385 -7.819 -0.277 7 X_A7:U89_Y X 7 ? Y 89 ? 20 1 1 A C 8 1_555 B G 40 1_555 0.555 -0.350 0.053 4.534 -9.176 -4.065 8 X_C8:G88_Y X 8 ? Y 88 ? 19 1 1 A C 9 1_555 B G 39 1_555 0.257 -0.377 0.064 -3.027 -0.891 -4.924 9 X_C9:G87_Y X 9 ? Y 87 ? 19 1 1 A A 12 1_555 B U 38 1_555 0.140 -0.229 -0.016 -10.759 -2.115 -3.041 10 X_A12:U86_Y X 12 ? Y 86 ? 20 1 1 A G 14 1_555 B C 37 1_555 -0.098 -0.091 -0.356 -18.094 -13.016 0.156 11 X_G14:C85_Y X 14 ? Y 85 ? 19 1 1 A A 17 1_555 B U 34 1_555 -0.120 -0.041 -0.455 1.423 -17.739 13.583 12 X_A17:U82_Y X 17 ? Y 82 ? 20 1 1 A U 18 1_555 B G 33 1_555 3.058 0.812 -0.590 3.621 -4.144 40.577 13 X_U18:G81_Y X 18 ? Y 81 ? ? 5 1 A G 19 1_555 B C 32 1_555 0.360 0.053 0.404 5.363 -2.557 7.434 14 X_G19:C80_Y X 19 ? Y 80 ? 19 1 1 A G 20 1_555 B C 31 1_555 -0.332 -0.225 0.149 -0.486 -18.721 1.800 15 X_G20:C79_Y X 20 ? Y 79 ? 19 1 1 A U 21 1_555 B U 30 1_555 -2.264 -1.980 0.681 -0.974 -21.937 5.755 16 X_U21:U78_Y X 21 ? Y 78 ? 16 1 1 A G 22 1_555 B C 29 1_555 -0.532 -0.067 -0.181 -20.936 -18.660 0.519 17 X_G22:C77_Y X 22 ? Y 77 ? 19 1 1 A A 23 1_555 B G 28 1_555 -0.295 1.567 -0.093 -16.689 0.615 -17.000 18 X_A23:G76_Y X 23 ? Y 76 ? 8 1 1 A A 24 1_555 B A 27 1_555 3.792 1.686 -0.474 -7.662 2.681 -44.110 19 X_A24:A75_Y X 24 ? Y 75 ? ? ? 1 B U 18 1_555 B U 25 1_555 -1.302 -4.467 0.914 -13.066 16.447 -135.449 20 Y_U66:U73_Y Y 66 ? Y 73 ? ? ? 1 B G 20 1_555 B G 24 1_555 -1.600 -3.638 -1.018 25.859 -3.779 86.320 21 Y_G68:G72_Y Y 68 ? Y 72 ? 6 3 1 A G 30 1_555 B G 22 1_555 1.937 3.490 0.050 3.603 -3.887 -84.165 22 X_G30:G70_Y X 30 ? Y 70 ? 6 3 1 A U 32 1_555 B A 16 1_555 -0.291 -0.073 0.158 -4.495 6.473 -5.236 23 X_U32:A64_Y X 32 ? Y 64 ? 20 1 1 A C 33 1_555 B G 15 1_555 -0.059 -0.089 -0.083 9.526 -12.551 7.182 24 X_C33:G63_Y X 33 ? Y 63 ? 19 1 1 A C 34 1_555 B G 12 1_555 0.150 -0.185 -0.038 3.925 -10.956 -1.094 25 X_C34:G60_Y X 34 ? Y 60 ? 19 1 1 A A 35 1_555 B U 11 1_555 0.161 0.001 0.120 4.905 -13.448 8.320 26 X_A35:U59_Y X 35 ? Y 59 ? 20 1 1 A G 36 1_555 B C 9 1_555 -0.828 -0.548 0.352 2.589 -13.588 -4.432 27 X_G36:C57_Y X 36 ? Y 57 ? 19 1 1 A C 37 1_555 B G 8 1_555 -0.170 -0.106 0.081 5.815 -15.395 -3.722 28 X_C37:G56_Y X 37 ? Y 56 ? 19 1 1 A C 38 1_555 B G 7 1_555 -0.218 -0.109 0.011 4.348 -7.718 -2.101 29 X_C38:G55_Y X 38 ? Y 55 ? 19 1 1 A G 39 1_555 B C 6 1_555 -0.399 -0.082 0.026 -3.270 -16.713 -0.401 30 X_G39:C54_Y X 39 ? Y 54 ? 19 1 1 A G 40 1_555 B C 5 1_555 -0.039 -0.029 -0.242 -7.410 -15.659 -0.260 31 X_G40:C53_Y X 40 ? Y 53 ? 19 1 1 A C 41 1_555 B G 4 1_555 0.544 -0.135 0.441 -3.442 -11.623 -3.078 32 X_C41:G52_Y X 41 ? Y 52 ? 19 1 1 A U 42 1_555 B A 3 1_555 0.166 -0.037 0.398 0.533 -20.278 0.264 33 X_U42:A51_Y X 42 ? Y 51 ? 20 1 1 A G 43 1_555 B C 2 1_555 0.783 -0.486 0.260 -11.644 -14.990 -4.173 34 X_G43:C50_Y X 43 ? Y 50 ? 19 1 1 A CCC 44 1_555 B G 1 1_555 -0.475 -0.018 0.458 -0.480 -6.919 -3.553 35 X_CCC44:G49_Y X 44 ? Y 49 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 B CCC 47 1_555 A A 2 1_555 B U 46 1_555 0.009 -1.464 3.240 -0.416 4.738 29.655 -3.756 -0.099 2.975 9.182 0.806 30.026 1 XX_G1A2:U94CCC101_YY X 1 ? Y 101 ? X 2 ? Y 94 ? 1 A A 2 1_555 B U 46 1_555 A C 3 1_555 B G 45 1_555 0.515 -1.309 3.120 0.822 5.448 35.437 -2.850 -0.728 2.904 8.883 -1.340 35.849 2 XX_A2C3:G93U94_YY X 2 ? Y 94 ? X 3 ? Y 93 ? 1 A C 3 1_555 B G 45 1_555 A G 4 1_555 B C 44 1_555 0.138 -1.857 3.139 1.468 13.039 33.968 -4.545 -0.045 2.299 21.356 -2.404 36.344 3 XX_C3G4:C92G93_YY X 3 ? Y 93 ? X 4 ? Y 92 ? 1 A G 4 1_555 B C 44 1_555 A C 5 1_555 B G 43 1_555 0.462 -1.860 3.046 0.328 4.171 29.696 -4.364 -0.833 2.769 8.088 -0.636 29.983 4 XX_G4C5:G91C92_YY X 4 ? Y 92 ? X 5 ? Y 91 ? 1 A C 5 1_555 B G 43 1_555 A G 6 1_555 B C 42 1_555 -0.207 -1.985 3.031 -1.857 6.950 28.865 -5.120 0.068 2.504 13.675 3.654 29.730 5 XX_C5G6:C90G91_YY X 5 ? Y 91 ? X 6 ? Y 90 ? 1 A G 6 1_555 B C 42 1_555 A A 7 1_555 B U 41 1_555 -0.263 -1.574 3.039 -1.923 6.574 30.613 -4.005 0.167 2.663 12.260 3.586 31.352 6 XX_G6A7:U89C90_YY X 6 ? Y 90 ? X 7 ? Y 89 ? 1 A A 7 1_555 B U 41 1_555 A C 8 1_555 B G 40 1_555 0.167 -1.558 3.275 -0.698 2.411 39.291 -2.595 -0.329 3.175 3.581 1.037 39.368 7 XX_A7C8:G88U89_YY X 7 ? Y 89 ? X 8 ? Y 88 ? 1 A C 8 1_555 B G 40 1_555 A C 9 1_555 B G 39 1_555 -0.298 -2.027 3.361 1.600 9.361 34.023 -4.657 0.715 2.710 15.624 -2.670 35.286 8 XX_C8C9:G87G88_YY X 8 ? Y 88 ? X 9 ? Y 87 ? 1 A C 9 1_555 B G 39 1_555 A A 12 1_555 B U 38 1_555 -1.523 -2.228 3.293 1.415 7.577 36.640 -4.401 2.547 2.736 11.891 -2.220 37.415 9 XX_C9A12:U86G87_YY X 9 ? Y 87 ? X 12 ? Y 86 ? 1 A A 12 1_555 B U 38 1_555 A G 14 1_555 B C 37 1_555 -2.549 -1.483 3.267 -0.784 2.881 52.174 -1.873 2.843 3.221 3.273 0.890 52.254 10 XX_A12G14:C85U86_YY X 12 ? Y 86 ? X 14 ? Y 85 ? 1 A G 14 1_555 B C 37 1_555 A A 17 1_555 B U 34 1_555 3.518 0.255 3.306 -13.287 8.029 86.427 0.020 -2.815 2.863 5.823 9.636 87.539 11 XX_G14A17:U82C85_YY X 14 ? Y 85 ? X 17 ? Y 82 ? 1 A A 17 1_555 B U 34 1_555 A U 18 1_555 B G 33 1_555 1.118 -1.489 3.410 -1.754 -1.288 40.160 -2.013 -1.833 3.404 -1.874 2.551 40.216 12 XX_A17U18:G81U82_YY X 17 ? Y 82 ? X 18 ? Y 81 ? 1 A U 18 1_555 B G 33 1_555 A G 19 1_555 B C 32 1_555 -2.414 -2.799 3.712 -3.614 -2.330 7.929 -10.236 3.620 4.952 -15.444 23.957 9.018 13 XX_U18G19:C80G81_YY X 18 ? Y 81 ? X 19 ? Y 80 ? 1 A G 19 1_555 B C 32 1_555 A G 20 1_555 B C 31 1_555 0.465 -1.901 3.232 5.007 8.462 27.881 -5.381 0.066 2.598 16.910 -10.005 29.531 14 XX_G19G20:C79C80_YY X 19 ? Y 80 ? X 20 ? Y 79 ? 1 A G 20 1_555 B C 31 1_555 A U 21 1_555 B U 30 1_555 -0.077 -1.840 2.981 -9.019 6.055 27.586 -4.701 -1.487 2.435 12.120 18.052 29.610 15 XX_G20U21:U78C79_YY X 20 ? Y 79 ? X 21 ? Y 78 ? 1 A U 21 1_555 B U 30 1_555 A G 22 1_555 B C 29 1_555 -0.317 -1.604 3.730 2.873 12.951 41.931 -3.462 0.715 3.100 17.577 -3.900 43.889 16 XX_U21G22:C77U78_YY X 21 ? Y 78 ? X 22 ? Y 77 ? 1 A G 22 1_555 B C 29 1_555 A A 23 1_555 B G 28 1_555 -0.935 -1.739 2.978 0.375 9.172 32.142 -4.301 1.679 2.394 16.159 -0.660 33.394 17 XX_G22A23:G76C77_YY X 22 ? Y 77 ? X 23 ? Y 76 ? 1 A A 23 1_555 B G 28 1_555 A A 24 1_555 B A 27 1_555 -1.518 -1.738 3.215 7.046 2.253 41.610 -2.628 2.781 2.839 3.141 -9.825 42.234 18 XX_A23A24:A75G76_YY X 23 ? Y 76 ? X 24 ? Y 75 ? 1 A A 24 1_555 B A 27 1_555 B U 18 1_555 B U 25 1_555 2.587 -1.651 -5.087 -108.568 -138.079 96.691 -2.184 -0.226 -4.003 -69.472 54.624 177.109 19 XY_A24U66:U73A75_YY X 24 ? Y 75 ? Y 66 ? Y 73 ? 1 B U 18 1_555 B U 25 1_555 B G 20 1_555 B G 24 1_555 -4.985 -0.578 0.975 109.201 -134.581 57.352 -0.501 2.324 -1.893 -68.640 -55.696 174.132 20 YY_U66G68:G72U73_YY Y 66 ? Y 73 ? Y 68 ? Y 72 ? 1 A G 30 1_555 B G 22 1_555 A U 32 1_555 B A 16 1_555 2.225 -2.085 6.317 8.924 -1.296 32.946 -3.135 -0.913 6.748 -2.234 -15.379 34.125 21 XX_G30U32:A64G70_YY X 30 ? Y 70 ? X 32 ? Y 64 ? 1 A U 32 1_555 B A 16 1_555 A C 33 1_555 B G 15 1_555 1.355 -1.954 2.811 1.491 8.437 29.739 -4.954 -2.313 2.248 16.025 -2.832 30.922 22 XX_U32C33:G63A64_YY X 32 ? Y 64 ? X 33 ? Y 63 ? 1 A C 33 1_555 B G 15 1_555 A C 34 1_555 B G 12 1_555 1.400 -1.597 3.274 0.663 7.223 47.288 -2.528 -1.676 3.032 8.943 -0.821 47.809 23 XX_C33C34:G60G63_YY X 33 ? Y 63 ? X 34 ? Y 60 ? 1 A C 34 1_555 B G 12 1_555 A A 35 1_555 B U 11 1_555 0.873 -1.585 3.234 -2.673 6.545 34.108 -3.581 -1.840 2.817 11.012 4.497 34.811 24 XX_C34A35:U59G60_YY X 34 ? Y 60 ? X 35 ? Y 59 ? 1 A A 35 1_555 B U 11 1_555 A G 36 1_555 B C 9 1_555 0.803 -1.700 3.119 -2.370 8.247 39.374 -3.306 -1.406 2.673 12.066 3.468 40.262 25 XX_A35G36:C57U59_YY X 35 ? Y 59 ? X 36 ? Y 57 ? 1 A G 36 1_555 B C 9 1_555 A C 37 1_555 B G 8 1_555 0.376 -1.252 3.178 0.683 2.636 35.281 -2.432 -0.521 3.086 4.341 -1.125 35.382 26 XX_G36C37:G56C57_YY X 36 ? Y 57 ? X 37 ? Y 56 ? 1 A C 37 1_555 B G 8 1_555 A C 38 1_555 B G 7 1_555 0.025 -2.081 3.223 1.080 5.295 32.326 -4.542 0.129 2.854 9.428 -1.923 32.763 27 XX_C37C38:G55G56_YY X 37 ? Y 56 ? X 38 ? Y 55 ? 1 A C 38 1_555 B G 7 1_555 A G 39 1_555 B C 6 1_555 0.693 -2.494 3.349 1.273 10.031 26.136 -7.276 -1.163 2.284 21.199 -2.691 27.992 28 XX_C38G39:C54G55_YY X 38 ? Y 55 ? X 39 ? Y 54 ? 1 A G 39 1_555 B C 6 1_555 A G 40 1_555 B C 5 1_555 -0.119 -1.503 3.251 1.384 10.830 35.337 -3.730 0.362 2.684 17.337 -2.215 36.934 29 XX_G39G40:C53C54_YY X 39 ? Y 54 ? X 40 ? Y 53 ? 1 A G 40 1_555 B C 5 1_555 A C 41 1_555 B G 4 1_555 -0.884 -1.539 3.131 -4.610 9.797 34.281 -3.777 0.832 2.697 16.128 7.589 35.902 30 XX_G40C41:G52C53_YY X 40 ? Y 53 ? X 41 ? Y 52 ? 1 A C 41 1_555 B G 4 1_555 A U 42 1_555 B A 3 1_555 0.469 -1.180 3.020 2.223 4.060 34.133 -2.566 -0.478 2.889 6.877 -3.766 34.436 31 XX_C41U42:A51G52_YY X 41 ? Y 52 ? X 42 ? Y 51 ? 1 A U 42 1_555 B A 3 1_555 A G 43 1_555 B C 2 1_555 -0.016 -2.197 3.098 -0.564 18.555 31.086 -5.576 -0.035 1.579 31.365 0.953 36.089 32 XX_U42G43:C50A51_YY X 42 ? Y 51 ? X 43 ? Y 50 ? 1 A G 43 1_555 B C 2 1_555 A CCC 44 1_555 B G 1 1_555 0.718 -1.358 3.081 -1.085 3.942 21.974 -4.828 -2.217 2.759 10.228 2.814 22.347 33 XX_G43CCC44:G49C50_YY X 43 ? Y 50 ? X 44 ? Y 49 ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 3 GLC 1 n 3 FRU 2 n # _atom_sites.entry_id 4TS0 _atom_sites.fract_transf_matrix[1][1] 0.025151 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020202 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005369 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol BA C F K N O P # loop_