HEADER MOTOR PROTEIN 17-JUL-14 4UT1 TITLE THE STRUCTURE OF THE FLAGELLAR HOOK JUNCTION PROTEIN FLGK TITLE 2 FROM BURKHOLDERIA PSEUDOMALLEI COMPND MOL_ID: 1; COMPND 2 MOLECULE: FLAGELLAR HOOK-ASSOCIATED PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 31-667; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BURKHOLDERIA PSEUDOMALLEI K96243; SOURCE 3 ORGANISM_TAXID: 272560; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_VARIANT: STAR; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET151/TOPO KEYWDS MOTOR PROTEIN, ANTIGEN, EPITOPE DISCOVERY EXPDTA X-RAY DIFFRACTION AUTHOR L.J.GOURLAY,P.LASSAUX,M.BOLOGNESI REVDAT 3 22-APR-15 4UT1 1 JRNL REVDAT 2 18-FEB-15 4UT1 1 JRNL REVDAT 1 11-FEB-15 4UT1 0 JRNL AUTH L.J.GOURLAY,R.J.THOMAS,C.PERI,O.CONCHILLO-SOLE, JRNL AUTH 2 M.FERRER-NAVARRO,A.NITHICHANON,J.VILA,X.DAURA, JRNL AUTH 3 G.LERTMEMONGKOLCHAI,R.TITBALL,G.COLOMBO,M.BOLOGNESI JRNL TITL FROM CRYSTAL STRUCTURE TO IN SILICO EPITOPE DISCOVERY IN JRNL TITL 2 BURKHOLDERIA PSEUDOMALLEI FLAGELLAR HOOK-ASSOCIATED PROTEIN JRNL TITL 3 FLGK. JRNL REF FEBS J. V. 282 1319 2015 JRNL REFN ISSN 1742-464X JRNL PMID 25645451 JRNL DOI 10.1111/FEBS.13223 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.800 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.969 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.34 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.74 REMARK 3 NUMBER OF REFLECTIONS : 49920 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.1999 REMARK 3 R VALUE (WORKING SET) : 0.1975 REMARK 3 FREE R VALUE : 0.2440 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.1 REMARK 3 FREE R VALUE TEST SET COUNT : 2537 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.9786 - 4.7150 0.97 2665 148 0.1693 0.2058 REMARK 3 2 4.7150 - 3.7433 0.99 2648 165 0.1538 0.1893 REMARK 3 3 3.7433 - 3.2704 0.99 2684 141 0.1883 0.2337 REMARK 3 4 3.2704 - 2.9715 0.99 2641 141 0.2057 0.2572 REMARK 3 5 2.9715 - 2.7586 0.99 2659 147 0.2015 0.2742 REMARK 3 6 2.7586 - 2.5960 0.98 2636 139 0.2066 0.2438 REMARK 3 7 2.5960 - 2.4660 0.98 2636 146 0.1941 0.2315 REMARK 3 8 2.4660 - 2.3586 0.98 2665 137 0.1940 0.2428 REMARK 3 9 2.3586 - 2.2678 0.98 2611 162 0.1921 0.2510 REMARK 3 10 2.2678 - 2.1896 0.98 2638 116 0.1867 0.2277 REMARK 3 11 2.1896 - 2.1211 0.98 2659 137 0.1947 0.2341 REMARK 3 12 2.1211 - 2.0605 0.97 2603 137 0.1967 0.2235 REMARK 3 13 2.0605 - 2.0063 0.97 2597 145 0.2065 0.2603 REMARK 3 14 2.0063 - 1.9573 0.97 2628 136 0.2293 0.3381 REMARK 3 15 1.9573 - 1.9128 0.97 2594 140 0.2482 0.3091 REMARK 3 16 1.9128 - 1.8721 0.96 2624 127 0.2752 0.3273 REMARK 3 17 1.8721 - 1.8347 0.97 2591 150 0.2900 0.3570 REMARK 3 18 1.8347 - 1.8000 0.97 2604 123 0.3138 0.3701 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.21 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.97 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.15 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 3972 REMARK 3 ANGLE : 0.927 5400 REMARK 3 CHIRALITY : 0.035 664 REMARK 3 PLANARITY : 0.005 711 REMARK 3 DIHEDRAL : 12.872 1369 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4UT1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-JUL-14. REMARK 100 THE PDBE ID CODE IS EBI-61260. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-OCT-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97372 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 49944 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.80 REMARK 200 RESOLUTION RANGE LOW (A) : 40.00 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.0 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 200 DATA REDUNDANCY : 3.6 REMARK 200 R MERGE (I) : 0.12 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.90 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.5 REMARK 200 R MERGE FOR SHELL (I) : 0.66 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.40 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: BALBES REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.3 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SUCCINIC ACID PH 7.0, 15% REMARK 280 PEG 3350 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 56.50250 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -5 REMARK 465 ARG A -4 REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 HIS A 1 REMARK 465 HIS A 2 REMARK 465 HIS A 3 REMARK 465 HIS A 4 REMARK 465 GLY A 5 REMARK 465 MET A 6 REMARK 465 ALA A 7 REMARK 465 SER A 8 REMARK 465 MET A 9 REMARK 465 THR A 10 REMARK 465 GLY A 11 REMARK 465 GLY A 12 REMARK 465 GLN A 13 REMARK 465 GLN A 14 REMARK 465 MET A 15 REMARK 465 GLY A 16 REMARK 465 ARG A 17 REMARK 465 ASP A 18 REMARK 465 LEU A 19 REMARK 465 TYR A 20 REMARK 465 ASP A 21 REMARK 465 ASP A 22 REMARK 465 ASP A 23 REMARK 465 ASP A 24 REMARK 465 LYS A 25 REMARK 465 ASP A 26 REMARK 465 HIS A 27 REMARK 465 PRO A 28 REMARK 465 PHE A 29 REMARK 465 THR A 30 REMARK 465 ALA A 31 REMARK 465 THR A 32 REMARK 465 PRO A 33 REMARK 465 GLY A 34 REMARK 465 TYR A 35 REMARK 465 SER A 36 REMARK 465 VAL A 37 REMARK 465 GLU A 38 REMARK 465 ARG A 39 REMARK 465 PRO A 40 REMARK 465 VAL A 41 REMARK 465 TYR A 42 REMARK 465 ALA A 43 REMARK 465 GLU A 44 REMARK 465 ALA A 45 REMARK 465 SER A 46 REMARK 465 GLY A 47 REMARK 465 GLN A 48 REMARK 465 TYR A 49 REMARK 465 THR A 50 REMARK 465 SER A 51 REMARK 465 SER A 52 REMARK 465 GLY A 53 REMARK 465 TYR A 54 REMARK 465 LEU A 55 REMARK 465 PRO A 56 REMARK 465 GLN A 57 REMARK 465 GLY A 58 REMARK 465 VAL A 59 REMARK 465 SER A 60 REMARK 465 THR A 61 REMARK 465 VAL A 62 REMARK 465 THR A 63 REMARK 465 VAL A 64 REMARK 465 GLU A 65 REMARK 465 ARG A 66 REMARK 465 GLN A 67 REMARK 465 TYR A 68 REMARK 465 ASN A 69 REMARK 465 GLN A 70 REMARK 465 TYR A 71 REMARK 465 LEU A 72 REMARK 465 GLN A 190 REMARK 465 GLY A 191 REMARK 465 GLN A 192 REMARK 465 PRO A 193 REMARK 465 GLY A 628 REMARK 465 VAL A 629 REMARK 465 ASN A 630 REMARK 465 GLN A 631 REMARK 465 ASN A 632 REMARK 465 GLU A 633 REMARK 465 GLU A 634 REMARK 465 ALA A 635 REMARK 465 ALA A 636 REMARK 465 ASN A 637 REMARK 465 LEU A 638 REMARK 465 MET A 639 REMARK 465 GLN A 640 REMARK 465 TYR A 641 REMARK 465 GLN A 642 REMARK 465 GLN A 643 REMARK 465 LEU A 644 REMARK 465 TYR A 645 REMARK 465 GLN A 646 REMARK 465 ALA A 647 REMARK 465 ASN A 648 REMARK 465 ALA A 649 REMARK 465 LYS A 650 REMARK 465 VAL A 651 REMARK 465 ILE A 652 REMARK 465 GLN A 653 REMARK 465 THR A 654 REMARK 465 ALA A 655 REMARK 465 ASN A 656 REMARK 465 SER A 657 REMARK 465 VAL A 658 REMARK 465 PHE A 659 REMARK 465 GLN A 660 REMARK 465 THR A 661 REMARK 465 VAL A 662 REMARK 465 LEU A 663 REMARK 465 GLY A 664 REMARK 465 LEU A 665 REMARK 465 PHE A 666 REMARK 465 ASN A 667 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 124 56.83 -142.88 REMARK 500 SER A 219 95.22 -168.17 REMARK 500 ASP A 250 101.80 -160.37 REMARK 500 GLN A 266 83.46 47.67 REMARK 500 THR A 293 -58.37 -123.36 REMARK 500 SER A 363 -168.00 -121.70 REMARK 500 ALA A 372 -38.52 -134.39 REMARK 500 LYS A 560 74.06 -152.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1628 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1629 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1630 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1631 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1632 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1633 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1634 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1635 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1636 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1637 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1638 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1639 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1640 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1641 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1642 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1643 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1644 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1645 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1646 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1647 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4USX RELATED DB: PDB REMARK 900 THE STRUCTURE OF THE C-TERMINAL YADA-LIKE DOMAIN OF REMARK 900 BPSL2063 FROM BURKHOLDERIA PSEUDOMALLEI DBREF 4UT1 A 31 667 UNP Q63YA8 Q63YA8_BURPS 31 667 SEQADV 4UT1 MET A -5 UNP Q63YA8 EXPRESSION TAG SEQADV 4UT1 ARG A -4 UNP Q63YA8 EXPRESSION TAG SEQADV 4UT1 GLY A -3 UNP Q63YA8 EXPRESSION TAG SEQADV 4UT1 SER A -2 UNP Q63YA8 EXPRESSION TAG SEQADV 4UT1 HIS A -1 UNP Q63YA8 EXPRESSION TAG SEQADV 4UT1 HIS A 0 UNP Q63YA8 EXPRESSION TAG SEQADV 4UT1 HIS A 1 UNP Q63YA8 EXPRESSION TAG SEQADV 4UT1 HIS A 2 UNP Q63YA8 EXPRESSION TAG SEQADV 4UT1 HIS A 3 UNP Q63YA8 EXPRESSION TAG SEQADV 4UT1 HIS A 4 UNP Q63YA8 EXPRESSION TAG SEQADV 4UT1 GLY A 5 UNP Q63YA8 EXPRESSION TAG SEQADV 4UT1 MET A 6 UNP Q63YA8 EXPRESSION TAG SEQADV 4UT1 ALA A 7 UNP Q63YA8 EXPRESSION TAG SEQADV 4UT1 SER A 8 UNP Q63YA8 EXPRESSION TAG SEQADV 4UT1 MET A 9 UNP Q63YA8 EXPRESSION TAG SEQADV 4UT1 THR A 10 UNP Q63YA8 EXPRESSION TAG SEQADV 4UT1 GLY A 11 UNP Q63YA8 EXPRESSION TAG SEQADV 4UT1 GLY A 12 UNP Q63YA8 EXPRESSION TAG SEQADV 4UT1 GLN A 13 UNP Q63YA8 EXPRESSION TAG SEQADV 4UT1 GLN A 14 UNP Q63YA8 EXPRESSION TAG SEQADV 4UT1 MET A 15 UNP Q63YA8 EXPRESSION TAG SEQADV 4UT1 GLY A 16 UNP Q63YA8 EXPRESSION TAG SEQADV 4UT1 ARG A 17 UNP Q63YA8 EXPRESSION TAG SEQADV 4UT1 ASP A 18 UNP Q63YA8 EXPRESSION TAG SEQADV 4UT1 LEU A 19 UNP Q63YA8 EXPRESSION TAG SEQADV 4UT1 TYR A 20 UNP Q63YA8 EXPRESSION TAG SEQADV 4UT1 ASP A 21 UNP Q63YA8 EXPRESSION TAG SEQADV 4UT1 ASP A 22 UNP Q63YA8 EXPRESSION TAG SEQADV 4UT1 ASP A 23 UNP Q63YA8 EXPRESSION TAG SEQADV 4UT1 ASP A 24 UNP Q63YA8 EXPRESSION TAG SEQADV 4UT1 LYS A 25 UNP Q63YA8 EXPRESSION TAG SEQADV 4UT1 ASP A 26 UNP Q63YA8 EXPRESSION TAG SEQADV 4UT1 HIS A 27 UNP Q63YA8 EXPRESSION TAG SEQADV 4UT1 PRO A 28 UNP Q63YA8 EXPRESSION TAG SEQADV 4UT1 PHE A 29 UNP Q63YA8 EXPRESSION TAG SEQADV 4UT1 THR A 30 UNP Q63YA8 EXPRESSION TAG SEQRES 1 A 673 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY MET ALA SEQRES 2 A 673 SER MET THR GLY GLY GLN GLN MET GLY ARG ASP LEU TYR SEQRES 3 A 673 ASP ASP ASP ASP LYS ASP HIS PRO PHE THR ALA THR PRO SEQRES 4 A 673 GLY TYR SER VAL GLU ARG PRO VAL TYR ALA GLU ALA SER SEQRES 5 A 673 GLY GLN TYR THR SER SER GLY TYR LEU PRO GLN GLY VAL SEQRES 6 A 673 SER THR VAL THR VAL GLU ARG GLN TYR ASN GLN TYR LEU SEQRES 7 A 673 SER ASN GLN LEU ASN ALA ALA GLN THR GLN GLY SER SER SEQRES 8 A 673 LEU SER THR TYR TYR THR LEU VAL ALA GLN LEU ASN ASN SEQRES 9 A 673 TYR VAL GLY SER PRO THR ALA GLY ILE ALA THR ALA ILE SEQRES 10 A 673 THR ASN TYR PHE THR GLY LEU GLN THR VAL ALA ASN ASN SEQRES 11 A 673 ALA ALA ASP PRO SER ALA ARG GLN THR ALA MET SER ASN SEQRES 12 A 673 ALA GLN THR LEU ALA SER GLN LEU VAL ALA ALA GLY GLN SEQRES 13 A 673 GLN TYR SER GLN LEU ARG GLN SER VAL ASN SER GLN LEU SEQRES 14 A 673 THR ASP THR VAL THR GLN ILE ASN SER TYR THR SER GLN SEQRES 15 A 673 ILE ALA GLN LEU ASN GLU GLN ILE ALA SER ALA SER SER SEQRES 16 A 673 GLN GLY GLN PRO PRO ASN GLN LEU LEU ASP GLN ARG ASP SEQRES 17 A 673 LEU ALA VAL SER LYS LEU SER GLN LEU ALA GLY VAL GLN SEQRES 18 A 673 VAL VAL GLN SER ASN GLY ASN TYR SER VAL PHE LEU SER SEQRES 19 A 673 GLY GLY GLN PRO LEU VAL VAL GLY ASN ALA SER TYR GLN SEQRES 20 A 673 LEU ALA THR VAL ALA SER PRO SER ASP PRO SER GLU LEU SEQRES 21 A 673 THR ILE VAL SER LYS GLY VAL ALA GLY SER ALA GLN PRO SEQRES 22 A 673 GLY PRO THR GLN TYR LEU PRO ASP VAL SER LEU THR GLY SEQRES 23 A 673 GLY ALA LEU GLY GLY LEU LEU ALA PHE ARG SER GLN THR SEQRES 24 A 673 LEU ASP PRO ALA GLN ALA GLN LEU GLY ALA LEU ALA VAL SEQRES 25 A 673 SER PHE ALA SER GLN VAL ASN ALA GLN ASN ALA LEU GLY SEQRES 26 A 673 VAL ASP MET SER GLY ASN PRO GLY GLY SER LEU PHE ALA SEQRES 27 A 673 VAL GLY ALA PRO ALA VAL TYR ALA ASN GLN ASN ASN THR SEQRES 28 A 673 GLY SER ALA THR LEU SER VAL SER PHE VAL ASP GLY THR SEQRES 29 A 673 GLN PRO THR THR SER ASP TYR ALA LEU SER TYR ASP GLY SEQRES 30 A 673 ALA LYS TYR THR LEU THR ASP ARG ALA THR GLY SER VAL SEQRES 31 A 673 VAL GLY THR ALA THR PRO SER SER THR PRO PRO THR MET SEQRES 32 A 673 THR ILE GLY GLY LEU LYS LEU SER LEU SER SER THR PRO SEQRES 33 A 673 ASN ALA GLY ASP SER PHE THR VAL LEU PRO THR ARG GLY SEQRES 34 A 673 ALA LEU ASP GLY PHE SER LEU ALA THR ALA ASN GLY SER SEQRES 35 A 673 ALA ILE ALA ALA ALA SER PRO VAL LEU ALA ALA GLY VAL SEQRES 36 A 673 ALA THR ASN SER GLY THR GLY VAL ILE SER GLN GLY SER SEQRES 37 A 673 VAL SER ALA GLY TYR GLN LEU PRO SER GLY THR THR THR SEQRES 38 A 673 LEU ALA TYR ASN ALA ALA SER LYS THR LEU SER GLY PHE SEQRES 39 A 673 PRO VAL GLY THR THR VAL THR ILE ALA GLY THR PRO PRO SEQRES 40 A 673 THR SER ILE ASN ILE THR SER ALA THR THR PRO VAL PRO SEQRES 41 A 673 TYR ASP PRO SER LYS GLY ALA SER MET THR ILE SER SER SEQRES 42 A 673 THR THR GLN PRO ALA PRO SER GLY VAL MET ASN GLY VAL SEQRES 43 A 673 SER VAL SER LEU SER GLY THR PRO ALA ASP GLY ASP GLN SEQRES 44 A 673 PHE THR ILE GLY ALA ASN LYS GLY THR ASN ASP GLY ARG SEQRES 45 A 673 ASN ALA LEU ALA LEU SER GLN LEU VAL ASN SER LYS THR SEQRES 46 A 673 MET ASN ASN GLY THR THR THR LEU THR GLY ALA TYR ALA SEQRES 47 A 673 GLY TYR VAL ASN ALA ILE GLY ASN ALA ALA SER GLN LEU SEQRES 48 A 673 LYS ALA SER SER ALA ALA GLN THR ALA LEU VAL GLY GLN SEQRES 49 A 673 ILE THR GLN ALA GLN GLN SER VAL SER GLY VAL ASN GLN SEQRES 50 A 673 ASN GLU GLU ALA ALA ASN LEU MET GLN TYR GLN GLN LEU SEQRES 51 A 673 TYR GLN ALA ASN ALA LYS VAL ILE GLN THR ALA ASN SER SEQRES 52 A 673 VAL PHE GLN THR VAL LEU GLY LEU PHE ASN HET EDO A1628 4 HET EDO A1629 4 HET EDO A1630 4 HET EDO A1631 4 HET EDO A1632 4 HET EDO A1633 4 HET EDO A1634 4 HET EDO A1635 4 HET EDO A1636 4 HET EDO A1637 4 HET EDO A1638 4 HET EDO A1639 4 HET EDO A1640 4 HET EDO A1641 4 HET EDO A1642 4 HET EDO A1643 4 HET EDO A1644 4 HET EDO A1645 4 HET EDO A1646 4 HET EDO A1647 10 HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 EDO 20(C2 H6 O2) FORMUL 3 HOH *258(H2 O) HELIX 1 1 SER A 73 GLY A 101 1 29 HELIX 2 2 GLY A 106 ASN A 124 1 19 HELIX 3 3 ASP A 127 SER A 188 1 62 HELIX 4 4 PRO A 194 GLN A 210 1 17 HELIX 5 5 PRO A 274 LEU A 278 5 5 HELIX 6 6 GLY A 280 THR A 293 1 14 HELIX 7 7 THR A 293 ALA A 317 1 25 HELIX 8 8 GLY A 423 PHE A 428 1 6 HELIX 9 9 ASN A 434 ILE A 438 5 5 HELIX 10 10 GLY A 565 LEU A 574 1 10 HELIX 11 11 VAL A 575 SER A 577 5 3 HELIX 12 12 THR A 586 SER A 625 1 40 SHEET 1 AA 6 VAL A 214 SER A 219 0 SHEET 2 AA 6 ASN A 222 LEU A 227 -1 O ASN A 222 N SER A 219 SHEET 3 AA 6 PRO A 232 VAL A 235 -1 N LEU A 233 O VAL A 225 SHEET 4 AA 6 ALA A 238 ALA A 246 -1 O ALA A 238 N VAL A 235 SHEET 5 AA 6 LEU A 254 VAL A 261 -1 O THR A 255 N VAL A 245 SHEET 6 AA 6 GLN A 271 TYR A 272 -1 O GLN A 271 N SER A 258 SHEET 1 AB 2 PHE A 331 ALA A 332 0 SHEET 2 AB 2 SER A 429 LEU A 430 -1 O SER A 429 N ALA A 332 SHEET 1 AC 5 ALA A 337 ALA A 340 0 SHEET 2 AC 5 SER A 415 LEU A 419 -1 O THR A 417 N TYR A 339 SHEET 3 AC 5 TYR A 365 TYR A 369 -1 O TYR A 365 N VAL A 418 SHEET 4 AC 5 TYR A 374 ASP A 378 -1 O THR A 375 N SER A 368 SHEET 5 AC 5 VAL A 384 ALA A 388 -1 N VAL A 385 O LEU A 376 SHEET 1 AD 3 LEU A 350 PHE A 354 0 SHEET 2 AD 3 LEU A 402 LEU A 406 -1 O LYS A 403 N SER A 353 SHEET 3 AD 3 THR A 396 ILE A 399 -1 O MET A 397 N LEU A 404 SHEET 1 AE 5 VAL A 444 GLY A 448 0 SHEET 2 AE 5 GLN A 553 ALA A 558 -1 O THR A 555 N ALA A 447 SHEET 3 AE 5 THR A 474 ASN A 479 -1 O THR A 474 N ILE A 556 SHEET 4 AE 5 THR A 484 SER A 486 -1 O THR A 484 N ASN A 479 SHEET 5 AE 5 VAL A 513 PRO A 514 -1 O VAL A 513 N LEU A 485 SHEET 1 AF 2 VAL A 457 ILE A 458 0 SHEET 2 AF 2 ASN A 538 SER A 545 -1 O SER A 545 N VAL A 457 SHEET 1 AG 2 SER A 462 GLN A 468 0 SHEET 2 AG 2 ASN A 538 SER A 545 -1 O ASN A 538 N GLN A 468 SHEET 1 AH 5 THR A 502 ASN A 505 0 SHEET 2 AH 5 THR A 492 ILE A 496 -1 O VAL A 494 N ILE A 504 SHEET 3 AH 5 ALA A 521 SER A 527 -1 O THR A 524 N THR A 495 SHEET 4 AH 5 ASN A 538 SER A 545 -1 O VAL A 540 N ILE A 525 SHEET 5 AH 5 SER A 462 GLN A 468 -1 O SER A 462 N SER A 541 SHEET 1 AI 5 THR A 502 ASN A 505 0 SHEET 2 AI 5 THR A 492 ILE A 496 -1 O VAL A 494 N ILE A 504 SHEET 3 AI 5 ALA A 521 SER A 527 -1 O THR A 524 N THR A 495 SHEET 4 AI 5 ASN A 538 SER A 545 -1 O VAL A 540 N ILE A 525 SHEET 5 AI 5 VAL A 457 ILE A 458 -1 O VAL A 457 N SER A 545 CISPEP 1 THR A 393 PRO A 394 0 0.32 CISPEP 2 THR A 499 PRO A 500 0 2.06 CISPEP 3 GLN A 530 PRO A 531 0 -0.90 CISPEP 4 LYS A 560 GLY A 561 0 -3.74 SITE 1 AC1 8 ASN A 313 SER A 329 PHE A 331 ALA A 332 SITE 2 AC1 8 ASN A 600 SER A 603 GLN A 604 HOH A2112 SITE 1 AC2 4 ASN A 113 ASN A 137 THR A 140 HOH A2024 SITE 1 AC3 3 ASN A 343 HOH A2162 HOH A2163 SITE 1 AC4 8 ASN A 171 THR A 174 SER A 175 SER A 239 SITE 2 AC4 8 TYR A 240 GLN A 241 ALA A 262 HOH A2065 SITE 1 AC5 4 LEU A 318 SER A 464 ALA A 465 HOH A2256 SITE 1 AC6 7 GLN A 150 THR A 507 ALA A 614 GLY A 617 SITE 2 AC6 7 GLN A 618 GLN A 621 HOH A2215 SITE 1 AC7 7 ASN A 113 THR A 116 GLY A 117 THR A 133 SITE 2 AC7 7 ASN A 137 HOH A2032 HOH A2042 SITE 1 AC8 4 PRO A 514 TYR A 515 ASP A 516 GLY A 520 SITE 1 AC9 6 LEU A 445 GLN A 460 ASN A 559 GLY A 561 SITE 2 AC9 6 ASP A 564 HOH A2188 SITE 1 BC1 6 VAL A 320 GLY A 324 PRO A 443 LEU A 469 SITE 2 BC1 6 ALA A 558 HOH A2192 SITE 1 BC2 5 ALA A 337 VAL A 338 GLN A 612 LEU A 615 SITE 2 BC2 5 HOH A2116 SITE 1 BC3 3 THR A 166 GLN A 169 HOH A2063 SITE 1 BC4 4 GLN A 315 LEU A 318 VAL A 463 HOH A2258 SITE 1 BC5 5 PRO A 248 THR A 255 TYR A 272 LEU A 273 SITE 2 BC5 5 HOH A2121 SITE 1 BC6 5 TYR A 99 VAL A 100 ILE A 107 TYR A 591 SITE 2 BC6 5 TYR A 594 SITE 1 BC7 5 GLY A 83 SER A 84 SER A 87 THR A 613 SITE 2 BC7 5 HOH A2006 SITE 1 BC8 4 ALA A 465 GLY A 466 TYR A 467 HOH A2104 SITE 1 BC9 5 PHE A 428 SER A 429 LYS A 606 ALA A 610 SITE 2 BC9 5 HOH A2168 SITE 1 CC1 5 SER A 351 VAL A 352 SER A 353 LYS A 403 SITE 2 CC1 5 SER A 405 SITE 1 CC2 5 ASP A 550 GLY A 551 ASP A 552 HOH A2180 SITE 2 CC2 5 HOH A2183 CRYST1 41.597 113.005 62.234 90.00 106.08 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024040 0.000000 0.006930 0.00000 SCALE2 0.000000 0.008849 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016723 0.00000