data_4UYK # _entry.id 4UYK # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4UYK PDBE EBI-61643 WWPDB D_1290061643 # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 4UYJ _pdbx_database_related.content_type unspecified _pdbx_database_related.details 'CRYSTAL STRUCTURE OF A SIGNAL RECOGNITION PARTICLE ALU DOMAIN IN THE ELONGATION ARREST CONFORMATION' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4UYK _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2014-09-01 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Bousset, L.' 1 'Mary, C.' 2 'Brooks, M.A.' 3 'Scherrer, A.' 4 'Strub, K.' 5 'Cusack, S.' 6 # _citation.id primary _citation.title 'Crystal Structure of a Signal Recognition Particle Alu Domain in the Elongation Arrest Conformation.' _citation.journal_abbrev RNA _citation.journal_volume 20 _citation.page_first 1955 _citation.page_last ? _citation.year 2014 _citation.journal_id_ASTM RNARFU _citation.country UK _citation.journal_id_ISSN 1355-8382 _citation.journal_id_CSD 2122 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 25336584 _citation.pdbx_database_id_DOI 10.1261/RNA.047209.114 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Bousset, L.' 1 primary 'Mary, C.' 2 primary 'Brooks, M.A.' 3 primary 'Scherrer, A.' 4 primary 'Strub, K.' 5 primary 'Cusack, S.' 6 # _cell.entry_id 4UYK _cell.length_a 100.860 _cell.length_b 100.860 _cell.length_c 197.470 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4UYK _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'SIGNAL RECOGNITION PARTICLE 9 KDA PROTEIN' 10233.126 1 ? ? 'RESIDUES 1-85' ? 2 polymer man 'SIGNAL RECOGNITION PARTICLE 14 KDA PROTEIN' 12386.117 1 ? ? 'RESIDUES 1-107' ? 3 polymer syn 'SRP RNA' 43523.797 1 ? ? 'ALU DOMAIN, RESIDUES 1-89 AND RESIDUES 289-314' ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 SRP9 2 'SRP14,18 KDA ALU RNA-BINDING PROTEIN' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no yes ;(MSE)PQYQTWEEFSRAAEKLYLADP(MSE)KARVVLKYRHSDGNLCVKVTDDLVCLVYKTDQAQDVKKIEKFHSQL (MSE)RL(MSE)VAKEARNVT(MSE)ET ; ;MPQYQTWEEFSRAAEKLYLADPMKARVVLKYRHSDGNLCVKVTDDLVCLVYKTDQAQDVKKIEKFHSQLMRLMVAKEARN VTMET ; A ? 2 'polypeptide(L)' no yes ;(MSE)VLLESEQFLTELTRLFQKCRTSGSVYITLKKYDGRTKPIPKKGTVEGFEPADNKCLLRATDGKKKISTVVSSKEV NKFQ(MSE)AYSNLLRAN(MSE)DGLKKRDKKNKTKKTK ; ;MVLLESEQFLTELTRLFQKCRTSGSVYITLKKYDGRTKPIPKKGTVEGFEPADNKCLLRATDGKKKISTVVSSKEVNKFQ MAYSNLLRANMDGLKKRDKKNKTKKTK ; B ? 3 polyribonucleotide no yes ;GGGGCUAGGCCGGGGGGUUCGGCGUCCCCUGUAACCGGAAACCGCCGAUAUGCCGGGGCCGAAGCCCGAGGGGCGGUUCC CGAAGCCGCCUCUGUAAGGAGGCGGUGGAGGGUUCCCACCCUCGGGCGUGCCU(CCC) ; ;GGGGCUAGGCCGGGGGGUUCGGCGUCCCCUGUAACCGGAAACCGCCGAUAUGCCGGGGCCGAAGCCCGAGGGGCGGUUCC CGAAGCCGCCUCUGUAAGGAGGCGGUGGAGGGUUCCCACCCUCGGGCGUGCCUC ; R ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 PRO n 1 3 GLN n 1 4 TYR n 1 5 GLN n 1 6 THR n 1 7 TRP n 1 8 GLU n 1 9 GLU n 1 10 PHE n 1 11 SER n 1 12 ARG n 1 13 ALA n 1 14 ALA n 1 15 GLU n 1 16 LYS n 1 17 LEU n 1 18 TYR n 1 19 LEU n 1 20 ALA n 1 21 ASP n 1 22 PRO n 1 23 MSE n 1 24 LYS n 1 25 ALA n 1 26 ARG n 1 27 VAL n 1 28 VAL n 1 29 LEU n 1 30 LYS n 1 31 TYR n 1 32 ARG n 1 33 HIS n 1 34 SER n 1 35 ASP n 1 36 GLY n 1 37 ASN n 1 38 LEU n 1 39 CYS n 1 40 VAL n 1 41 LYS n 1 42 VAL n 1 43 THR n 1 44 ASP n 1 45 ASP n 1 46 LEU n 1 47 VAL n 1 48 CYS n 1 49 LEU n 1 50 VAL n 1 51 TYR n 1 52 LYS n 1 53 THR n 1 54 ASP n 1 55 GLN n 1 56 ALA n 1 57 GLN n 1 58 ASP n 1 59 VAL n 1 60 LYS n 1 61 LYS n 1 62 ILE n 1 63 GLU n 1 64 LYS n 1 65 PHE n 1 66 HIS n 1 67 SER n 1 68 GLN n 1 69 LEU n 1 70 MSE n 1 71 ARG n 1 72 LEU n 1 73 MSE n 1 74 VAL n 1 75 ALA n 1 76 LYS n 1 77 GLU n 1 78 ALA n 1 79 ARG n 1 80 ASN n 1 81 VAL n 1 82 THR n 1 83 MSE n 1 84 GLU n 1 85 THR n 2 1 MSE n 2 2 VAL n 2 3 LEU n 2 4 LEU n 2 5 GLU n 2 6 SER n 2 7 GLU n 2 8 GLN n 2 9 PHE n 2 10 LEU n 2 11 THR n 2 12 GLU n 2 13 LEU n 2 14 THR n 2 15 ARG n 2 16 LEU n 2 17 PHE n 2 18 GLN n 2 19 LYS n 2 20 CYS n 2 21 ARG n 2 22 THR n 2 23 SER n 2 24 GLY n 2 25 SER n 2 26 VAL n 2 27 TYR n 2 28 ILE n 2 29 THR n 2 30 LEU n 2 31 LYS n 2 32 LYS n 2 33 TYR n 2 34 ASP n 2 35 GLY n 2 36 ARG n 2 37 THR n 2 38 LYS n 2 39 PRO n 2 40 ILE n 2 41 PRO n 2 42 LYS n 2 43 LYS n 2 44 GLY n 2 45 THR n 2 46 VAL n 2 47 GLU n 2 48 GLY n 2 49 PHE n 2 50 GLU n 2 51 PRO n 2 52 ALA n 2 53 ASP n 2 54 ASN n 2 55 LYS n 2 56 CYS n 2 57 LEU n 2 58 LEU n 2 59 ARG n 2 60 ALA n 2 61 THR n 2 62 ASP n 2 63 GLY n 2 64 LYS n 2 65 LYS n 2 66 LYS n 2 67 ILE n 2 68 SER n 2 69 THR n 2 70 VAL n 2 71 VAL n 2 72 SER n 2 73 SER n 2 74 LYS n 2 75 GLU n 2 76 VAL n 2 77 ASN n 2 78 LYS n 2 79 PHE n 2 80 GLN n 2 81 MSE n 2 82 ALA n 2 83 TYR n 2 84 SER n 2 85 ASN n 2 86 LEU n 2 87 LEU n 2 88 ARG n 2 89 ALA n 2 90 ASN n 2 91 MSE n 2 92 ASP n 2 93 GLY n 2 94 LEU n 2 95 LYS n 2 96 LYS n 2 97 ARG n 2 98 ASP n 2 99 LYS n 2 100 LYS n 2 101 ASN n 2 102 LYS n 2 103 THR n 2 104 LYS n 2 105 LYS n 2 106 THR n 2 107 LYS n 3 1 G n 3 2 G n 3 3 G n 3 4 G n 3 5 C n 3 6 U n 3 7 A n 3 8 G n 3 9 G n 3 10 C n 3 11 C n 3 12 G n 3 13 G n 3 14 G n 3 15 G n 3 16 G n 3 17 G n 3 18 U n 3 19 U n 3 20 C n 3 21 G n 3 22 G n 3 23 C n 3 24 G n 3 25 U n 3 26 C n 3 27 C n 3 28 C n 3 29 C n 3 30 U n 3 31 G n 3 32 U n 3 33 A n 3 34 A n 3 35 C n 3 36 C n 3 37 G n 3 38 G n 3 39 A n 3 40 A n 3 41 A n 3 42 C n 3 43 C n 3 44 G n 3 45 C n 3 46 C n 3 47 G n 3 48 A n 3 49 U n 3 50 A n 3 51 U n 3 52 G n 3 53 C n 3 54 C n 3 55 G n 3 56 G n 3 57 G n 3 58 G n 3 59 C n 3 60 C n 3 61 G n 3 62 A n 3 63 A n 3 64 G n 3 65 C n 3 66 C n 3 67 C n 3 68 G n 3 69 A n 3 70 G n 3 71 G n 3 72 G n 3 73 G n 3 74 C n 3 75 G n 3 76 G n 3 77 U n 3 78 U n 3 79 C n 3 80 C n 3 81 C n 3 82 G n 3 83 A n 3 84 A n 3 85 G n 3 86 C n 3 87 C n 3 88 G n 3 89 C n 3 90 C n 3 91 U n 3 92 C n 3 93 U n 3 94 G n 3 95 U n 3 96 A n 3 97 A n 3 98 G n 3 99 G n 3 100 A n 3 101 G n 3 102 G n 3 103 C n 3 104 G n 3 105 G n 3 106 U n 3 107 G n 3 108 G n 3 109 A n 3 110 G n 3 111 G n 3 112 G n 3 113 U n 3 114 U n 3 115 C n 3 116 C n 3 117 C n 3 118 A n 3 119 C n 3 120 C n 3 121 C n 3 122 U n 3 123 C n 3 124 G n 3 125 G n 3 126 G n 3 127 C n 3 128 G n 3 129 U n 3 130 G n 3 131 C n 3 132 C n 3 133 U n 3 134 CCC n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? HUMAN ? ? ? ? ? ? ? ? 'HOMO SAPIENS' 9606 ? ? ? ? ? ? ? ? 'ESCHERICHIA COLI' 469008 ? ? ? ? ? ? 'BL21(DE3)' ? ? ? ? ? ? ? ? PET9A ? ? PEH9 ? ? 2 1 sample ? ? ? HUMAN ? ? ? ? ? ? ? ? 'HOMO SAPIENS' 9606 ? ? ? ? ? ? ? ? 'ESCHERICHIA COLI' 469008 ? ? ? ? ? ? 'BL21(DE3)' ? ? ? ? ? ? ? ? PET9A ? ? PEH14DELTAR ? ? # _pdbx_entity_src_syn.entity_id 3 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'PYROCOCCUS HORIKOSHII OT3' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 70601 _pdbx_entity_src_syn.details ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP SRP09_HUMAN 1 ? ? P49458 ? 2 UNP SRP14_HUMAN 2 ? ? P37108 ? 3 GB 527046612 3 ? ? HG323574 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4UYK A 1 ? 85 ? P49458 1 ? 85 ? 1 85 2 2 4UYK B 1 ? 107 ? P37108 1 ? 107 ? 1 107 3 3 4UYK R 2 ? 93 ? HG323574 7 ? 98 ? 7 98 4 3 4UYK R 94 ? 134 ? HG323574 274 ? 314 ? 99 139 # _struct_ref_seq_dif.align_id 3 _struct_ref_seq_dif.pdbx_pdb_id_code 4UYK _struct_ref_seq_dif.mon_id G _struct_ref_seq_dif.pdbx_pdb_strand_id R _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name GB _struct_ref_seq_dif.pdbx_seq_db_accession_code 527046612 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 6 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CCC 'RNA linking' n ;CYTIDINE-5'-PHOSPHATE-2',3'-CYCLIC PHOSPHATE ; ? 'C9 H13 N3 O10 P2' 385.161 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4UYK _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 4.12 _exptl_crystal.density_percent_sol 73.3 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '17.5% PEG 400, 5% GLYCEROL BUFFERED IN 100 MM SODIUM ACETATE PH 5.0' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC CCD' _diffrn_detector.pdbx_collection_date 2004-04-16 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'DIAMOND (111)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.934 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID14-1' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID14-1 _diffrn_source.pdbx_wavelength 0.934 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4UYK _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30.00 _reflns.d_resolution_high 3.20 _reflns.number_obs 30821 _reflns.number_all ? _reflns.percent_possible_obs 97.8 _reflns.pdbx_Rmerge_I_obs 0.08 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 9.09 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 2.18 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 3.20 _reflns_shell.d_res_low 3.40 _reflns_shell.percent_possible_all 95.9 _reflns_shell.Rmerge_I_obs 0.64 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 1.74 _reflns_shell.pdbx_redundancy 2.18 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4UYK _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 16238 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 89.82 _refine.ls_d_res_high 3.22 _refine.ls_percent_reflns_obs 99.30 _refine.ls_R_factor_obs 0.19365 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.19160 _refine.ls_R_factor_R_free 0.23315 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 854 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.957 _refine.correlation_coeff_Fo_to_Fc_free 0.936 _refine.B_iso_mean 123.705 _refine.aniso_B[1][1] 3.44 _refine.aniso_B[2][2] 3.44 _refine.aniso_B[3][3] -6.89 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. U VALUES WITH TLS ADDED' _refine.pdbx_starting_model NONE _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free 0.392 _refine.overall_SU_ML 0.338 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 48.231 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1377 _refine_hist.pdbx_number_atoms_nucleic_acid 2882 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 4259 _refine_hist.d_res_high 3.22 _refine_hist.d_res_low 89.82 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.005 0.014 ? 4624 'X-RAY DIFFRACTION' ? r_bond_other_d 0.002 0.020 ? 2738 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.116 1.478 ? 6910 'X-RAY DIFFRACTION' ? r_angle_other_deg 1.071 3.000 ? 6462 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.991 5.000 ? 171 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 33.828 23.966 ? 58 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 19.484 15.000 ? 265 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 21.631 15.000 ? 10 'X-RAY DIFFRACTION' ? r_chiral_restr 0.072 0.200 ? 752 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.005 0.020 ? 3158 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 1049 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 2.790 6.421 ? 690 'X-RAY DIFFRACTION' ? r_mcbond_other 2.788 6.419 ? 689 'X-RAY DIFFRACTION' ? r_mcangle_it 4.816 9.598 ? 859 'X-RAY DIFFRACTION' ? r_mcangle_other 4.813 9.602 ? 860 'X-RAY DIFFRACTION' ? r_scbond_it 2.520 7.392 ? 3934 'X-RAY DIFFRACTION' ? r_scbond_other 2.519 7.392 ? 3935 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_other 4.189 11.068 ? 6051 'X-RAY DIFFRACTION' ? r_long_range_B_refined 7.091 71.367 ? 5914 'X-RAY DIFFRACTION' ? r_long_range_B_other 7.091 71.368 ? 5915 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 3.220 _refine_ls_shell.d_res_low 3.304 _refine_ls_shell.number_reflns_R_work 1136 _refine_ls_shell.R_factor_R_work 0.338 _refine_ls_shell.percent_reflns_obs 96.60 _refine_ls_shell.R_factor_R_free 0.445 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 59 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 4UYK _struct.title 'Crystal structure of a Signal Recognition Particle Alu domain in the elongation arrest conformation' _struct.pdbx_descriptor 'SIGNAL RECOGNITION PARTICLE 9 KDA PROTEIN, SIGNAL RECOGNITION PARTICLE 14 KDA PROTEIN' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4UYK _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' _struct_keywords.text 'SIGNALING PROTEIN, SIGNAL RECOGNITION PARTICLE, TRANSLATION, RNA, RNA FOLDING' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 6 ? ASP A 21 ? THR A 6 ASP A 21 1 ? 16 HELX_P HELX_P2 2 GLN A 55 ? ALA A 75 ? GLN A 55 ALA A 75 1 ? 21 HELX_P HELX_P3 3 GLU A 77 ? VAL A 81 ? GLU A 77 VAL A 81 5 ? 5 HELX_P HELX_P4 4 GLU B 5 ? CYS B 20 ? GLU B 5 CYS B 20 1 ? 16 HELX_P HELX_P5 5 SER B 73 ? MSE B 91 ? SER B 73 MSE B 91 1 ? 19 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A PRO 22 C ? ? ? 1_555 A MSE 23 N ? ? A PRO 22 A MSE 23 1_555 ? ? ? ? ? ? ? 1.327 ? covale2 covale ? ? A MSE 23 C ? ? ? 1_555 A LYS 24 N ? ? A MSE 23 A LYS 24 1_555 ? ? ? ? ? ? ? 1.331 ? covale3 covale ? ? A LEU 69 C ? ? ? 1_555 A MSE 70 N ? ? A LEU 69 A MSE 70 1_555 ? ? ? ? ? ? ? 1.328 ? covale4 covale ? ? A MSE 70 C ? ? ? 1_555 A ARG 71 N ? ? A MSE 70 A ARG 71 1_555 ? ? ? ? ? ? ? 1.329 ? covale5 covale ? ? A LEU 72 C ? ? ? 1_555 A MSE 73 N ? ? A LEU 72 A MSE 73 1_555 ? ? ? ? ? ? ? 1.331 ? covale6 covale ? ? A MSE 73 C ? ? ? 1_555 A VAL 74 N ? ? A MSE 73 A VAL 74 1_555 ? ? ? ? ? ? ? 1.326 ? covale7 covale ? ? A THR 82 C ? ? ? 1_555 A MSE 83 N ? ? A THR 82 A MSE 83 1_555 ? ? ? ? ? ? ? 1.332 ? covale8 covale ? ? B MSE 1 C ? ? ? 1_555 B VAL 2 N ? ? B MSE 1 B VAL 2 1_555 ? ? ? ? ? ? ? 1.325 ? covale9 covale ? ? B GLN 80 C ? ? ? 1_555 B MSE 81 N ? ? B GLN 80 B MSE 81 1_555 ? ? ? ? ? ? ? 1.328 ? covale10 covale ? ? B MSE 81 C ? ? ? 1_555 B ALA 82 N ? ? B MSE 81 B ALA 82 1_555 ? ? ? ? ? ? ? 1.331 ? covale11 covale ? ? B ASN 90 C ? ? ? 1_555 B MSE 91 N ? ? B ASN 90 B MSE 91 1_555 ? ? ? ? ? ? ? 1.333 ? covale12 covale ? ? B MSE 91 C ? ? ? 1_555 B ASP 92 N ? ? B MSE 91 B ASP 92 1_555 ? ? ? ? ? ? ? 1.334 ? covale13 covale ? ? C U 133 "O3'" ? ? ? 1_555 C CCC 134 P ? ? R U 138 R CCC 139 1_555 ? ? ? ? ? ? ? 1.601 ? hydrog1 hydrog ? ? C G 1 N1 ? ? ? 1_555 C CCC 134 N3 ? ? R G 6 R CCC 139 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog2 hydrog ? ? C G 1 N2 ? ? ? 1_555 C CCC 134 O2 ? ? R G 6 R CCC 139 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog3 hydrog ? ? C G 1 O6 ? ? ? 1_555 C CCC 134 N4 ? ? R G 6 R CCC 139 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog4 hydrog ? ? C G 2 N1 ? ? ? 1_555 C U 133 O2 ? ? R G 7 R U 138 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? hydrog5 hydrog ? ? C G 2 O6 ? ? ? 1_555 C U 133 N3 ? ? R G 7 R U 138 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? hydrog6 hydrog ? ? C G 3 N1 ? ? ? 1_555 C C 132 N3 ? ? R G 8 R C 137 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog7 hydrog ? ? C G 3 N2 ? ? ? 1_555 C C 132 O2 ? ? R G 8 R C 137 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog8 hydrog ? ? C G 3 O6 ? ? ? 1_555 C C 132 N4 ? ? R G 8 R C 137 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog9 hydrog ? ? C G 4 N1 ? ? ? 1_555 C C 131 N3 ? ? R G 9 R C 136 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog10 hydrog ? ? C G 4 N2 ? ? ? 1_555 C C 131 O2 ? ? R G 9 R C 136 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog11 hydrog ? ? C G 4 O6 ? ? ? 1_555 C C 131 N4 ? ? R G 9 R C 136 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog12 hydrog ? ? C C 5 N3 ? ? ? 1_555 C G 130 N1 ? ? R C 10 R G 135 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog13 hydrog ? ? C C 5 N4 ? ? ? 1_555 C G 130 O6 ? ? R C 10 R G 135 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog14 hydrog ? ? C C 5 O2 ? ? ? 1_555 C G 130 N2 ? ? R C 10 R G 135 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog15 hydrog ? ? C U 6 N3 ? ? ? 1_555 C A 62 N7 ? ? R U 11 R A 67 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? hydrog16 hydrog ? ? C U 6 O2 ? ? ? 1_555 C A 62 N6 ? ? R U 11 R A 67 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? hydrog17 hydrog ? ? C A 7 N6 ? ? ? 1_555 C G 61 N3 ? ? R A 12 R G 66 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? hydrog18 hydrog ? ? C A 7 N7 ? ? ? 1_555 C G 61 N2 ? ? R A 12 R G 66 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? hydrog19 hydrog ? ? C G 8 N1 ? ? ? 1_555 C C 60 N3 ? ? R G 13 R C 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog20 hydrog ? ? C G 8 N2 ? ? ? 1_555 C C 60 O2 ? ? R G 13 R C 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog21 hydrog ? ? C G 8 O6 ? ? ? 1_555 C C 60 N4 ? ? R G 13 R C 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog22 hydrog ? ? C G 8 N2 ? ? ? 1_555 C A 63 N3 ? ? R G 13 R A 68 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? hydrog23 hydrog ? ? C G 9 N1 ? ? ? 1_555 C C 59 N3 ? ? R G 14 R C 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog24 hydrog ? ? C G 9 N2 ? ? ? 1_555 C C 59 O2 ? ? R G 14 R C 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog25 hydrog ? ? C G 9 O6 ? ? ? 1_555 C C 59 N4 ? ? R G 14 R C 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog26 hydrog ? ? C C 10 N3 ? ? ? 1_555 C G 58 N1 ? ? R C 15 R G 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog27 hydrog ? ? C C 10 N4 ? ? ? 1_555 C G 58 O6 ? ? R C 15 R G 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog28 hydrog ? ? C C 10 O2 ? ? ? 1_555 C G 58 N2 ? ? R C 15 R G 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog29 hydrog ? ? C C 11 N3 ? ? ? 1_555 C G 57 N1 ? ? R C 16 R G 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog30 hydrog ? ? C C 11 N4 ? ? ? 1_555 C G 57 O6 ? ? R C 16 R G 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog31 hydrog ? ? C C 11 O2 ? ? ? 1_555 C G 57 N2 ? ? R C 16 R G 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog32 hydrog ? ? C G 12 N1 ? ? ? 1_555 C U 30 O2 ? ? R G 17 R U 35 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? hydrog33 hydrog ? ? C G 12 O6 ? ? ? 1_555 C U 30 N3 ? ? R G 17 R U 35 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? hydrog34 hydrog ? ? C G 13 N1 ? ? ? 1_555 C C 29 N3 ? ? R G 18 R C 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog35 hydrog ? ? C G 13 N2 ? ? ? 1_555 C C 29 O2 ? ? R G 18 R C 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog36 hydrog ? ? C G 13 O6 ? ? ? 1_555 C C 29 N4 ? ? R G 18 R C 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog37 hydrog ? ? C G 14 N1 ? ? ? 1_555 C C 28 N3 ? ? R G 19 R C 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog38 hydrog ? ? C G 14 N2 ? ? ? 1_555 C C 28 O2 ? ? R G 19 R C 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog39 hydrog ? ? C G 14 O6 ? ? ? 1_555 C C 28 N4 ? ? R G 19 R C 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog40 hydrog ? ? C G 15 N1 ? ? ? 1_555 C C 27 N3 ? ? R G 20 R C 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog41 hydrog ? ? C G 15 N2 ? ? ? 1_555 C C 27 O2 ? ? R G 20 R C 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog42 hydrog ? ? C G 15 O6 ? ? ? 1_555 C C 27 N4 ? ? R G 20 R C 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog43 hydrog ? ? C G 16 N1 ? ? ? 1_555 C C 26 N3 ? ? R G 21 R C 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog44 hydrog ? ? C G 16 N2 ? ? ? 1_555 C C 26 O2 ? ? R G 21 R C 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog45 hydrog ? ? C G 16 O6 ? ? ? 1_555 C C 26 N4 ? ? R G 21 R C 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog46 hydrog ? ? C U 18 O2 ? ? ? 1_555 C A 41 N6 ? ? R U 23 R A 46 1_555 ? ? ? ? ? ? 'U-A PAIR' ? ? hydrog47 hydrog ? ? C C 20 N3 ? ? ? 1_555 C G 47 N1 ? ? R C 25 R G 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog48 hydrog ? ? C C 20 N4 ? ? ? 1_555 C G 47 O6 ? ? R C 25 R G 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog49 hydrog ? ? C C 20 O2 ? ? ? 1_555 C G 47 N2 ? ? R C 25 R G 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog50 hydrog ? ? C G 21 N1 ? ? ? 1_555 C C 46 N3 ? ? R G 26 R C 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog51 hydrog ? ? C G 21 N2 ? ? ? 1_555 C C 46 O2 ? ? R G 26 R C 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog52 hydrog ? ? C G 21 O6 ? ? ? 1_555 C C 46 N4 ? ? R G 26 R C 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog53 hydrog ? ? C G 21 N2 ? ? ? 1_555 C A 50 N3 ? ? R G 26 R A 55 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? hydrog54 hydrog ? ? C G 22 N1 ? ? ? 1_555 C C 45 N3 ? ? R G 27 R C 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog55 hydrog ? ? C G 22 N2 ? ? ? 1_555 C C 45 O2 ? ? R G 27 R C 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog56 hydrog ? ? C G 22 O6 ? ? ? 1_555 C C 45 N4 ? ? R G 27 R C 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog57 hydrog ? ? C C 23 N3 ? ? ? 1_555 C G 44 N1 ? ? R C 28 R G 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog58 hydrog ? ? C C 23 N4 ? ? ? 1_555 C G 44 O6 ? ? R C 28 R G 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog59 hydrog ? ? C C 23 O2 ? ? ? 1_555 C G 44 N2 ? ? R C 28 R G 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog60 hydrog ? ? C G 24 N2 ? ? ? 1_555 C A 40 N3 ? ? R G 29 R A 45 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? hydrog61 hydrog ? ? C G 24 N1 ? ? ? 1_555 C C 43 N3 ? ? R G 29 R C 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog62 hydrog ? ? C G 24 N2 ? ? ? 1_555 C C 43 O2 ? ? R G 29 R C 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog63 hydrog ? ? C G 24 O6 ? ? ? 1_555 C C 43 N4 ? ? R G 29 R C 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog64 hydrog ? ? C U 25 N3 ? ? ? 1_555 C A 41 N7 ? ? R U 30 R A 46 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? hydrog65 hydrog ? ? C U 25 O4 ? ? ? 1_555 C A 41 N6 ? ? R U 30 R A 46 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? hydrog66 hydrog ? ? C C 35 N3 ? ? ? 1_555 C G 56 N1 ? ? R C 40 R G 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog67 hydrog ? ? C C 35 N4 ? ? ? 1_555 C G 56 O6 ? ? R C 40 R G 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog68 hydrog ? ? C C 35 O2 ? ? ? 1_555 C G 56 N2 ? ? R C 40 R G 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog69 hydrog ? ? C C 36 N3 ? ? ? 1_555 C G 55 N1 ? ? R C 41 R G 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog70 hydrog ? ? C C 36 N4 ? ? ? 1_555 C G 55 O6 ? ? R C 41 R G 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog71 hydrog ? ? C C 36 O2 ? ? ? 1_555 C G 55 N2 ? ? R C 41 R G 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog72 hydrog ? ? C G 37 N1 ? ? ? 1_555 C C 54 N3 ? ? R G 42 R C 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog73 hydrog ? ? C G 37 N2 ? ? ? 1_555 C C 54 O2 ? ? R G 42 R C 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog74 hydrog ? ? C G 37 O6 ? ? ? 1_555 C C 54 N4 ? ? R G 42 R C 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog75 hydrog ? ? C G 38 N1 ? ? ? 1_555 C C 53 N3 ? ? R G 43 R C 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog76 hydrog ? ? C G 38 N2 ? ? ? 1_555 C C 53 O2 ? ? R G 43 R C 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog77 hydrog ? ? C G 38 O6 ? ? ? 1_555 C C 53 N4 ? ? R G 43 R C 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog78 hydrog ? ? C A 39 N1 ? ? ? 1_555 C G 52 N1 ? ? R A 44 R G 57 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? hydrog79 hydrog ? ? C A 39 N6 ? ? ? 1_555 C G 52 O6 ? ? R A 44 R G 57 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? hydrog80 hydrog ? ? C G 44 N2 ? ? ? 1_555 C G 52 N3 ? ? R G 49 R G 57 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? hydrog81 hydrog ? ? C G 44 N3 ? ? ? 1_555 C G 52 N2 ? ? R G 49 R G 57 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? hydrog82 hydrog ? ? C A 63 N7 ? ? ? 1_555 C G 128 N2 ? ? R A 68 R G 133 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? hydrog83 hydrog ? ? C G 64 N1 ? ? ? 1_555 C C 127 N3 ? ? R G 69 R C 132 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog84 hydrog ? ? C G 64 N2 ? ? ? 1_555 C C 127 O2 ? ? R G 69 R C 132 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog85 hydrog ? ? C G 64 O6 ? ? ? 1_555 C C 127 N4 ? ? R G 69 R C 132 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog86 hydrog ? ? C C 65 N3 ? ? ? 1_555 C G 126 N1 ? ? R C 70 R G 131 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog87 hydrog ? ? C C 65 N4 ? ? ? 1_555 C G 126 O6 ? ? R C 70 R G 131 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog88 hydrog ? ? C C 65 O2 ? ? ? 1_555 C G 126 N2 ? ? R C 70 R G 131 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog89 hydrog ? ? C C 66 N3 ? ? ? 1_555 C G 125 N1 ? ? R C 71 R G 130 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog90 hydrog ? ? C C 66 N4 ? ? ? 1_555 C G 125 O6 ? ? R C 71 R G 130 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog91 hydrog ? ? C C 66 O2 ? ? ? 1_555 C G 125 N2 ? ? R C 71 R G 130 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog92 hydrog ? ? C C 67 N3 ? ? ? 1_555 C G 124 N1 ? ? R C 72 R G 129 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog93 hydrog ? ? C C 67 N4 ? ? ? 1_555 C G 124 O6 ? ? R C 72 R G 129 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog94 hydrog ? ? C C 67 O2 ? ? ? 1_555 C G 124 N2 ? ? R C 72 R G 129 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog95 hydrog ? ? C G 68 N1 ? ? ? 1_555 C C 123 N3 ? ? R G 73 R C 128 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog96 hydrog ? ? C G 68 N2 ? ? ? 1_555 C C 123 O2 ? ? R G 73 R C 128 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog97 hydrog ? ? C G 68 O6 ? ? ? 1_555 C C 123 N4 ? ? R G 73 R C 128 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog98 hydrog ? ? C A 69 N1 ? ? ? 1_555 C U 122 N3 ? ? R A 74 R U 127 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog99 hydrog ? ? C A 69 N6 ? ? ? 1_555 C U 122 O4 ? ? R A 74 R U 127 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog100 hydrog ? ? C G 70 N1 ? ? ? 1_555 C C 121 N3 ? ? R G 75 R C 126 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog101 hydrog ? ? C G 70 N2 ? ? ? 1_555 C C 121 O2 ? ? R G 75 R C 126 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog102 hydrog ? ? C G 70 O6 ? ? ? 1_555 C C 121 N4 ? ? R G 75 R C 126 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog103 hydrog ? ? C G 71 N1 ? ? ? 1_555 C C 120 N3 ? ? R G 76 R C 125 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog104 hydrog ? ? C G 71 N2 ? ? ? 1_555 C C 120 O2 ? ? R G 76 R C 125 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog105 hydrog ? ? C G 71 O6 ? ? ? 1_555 C C 120 N4 ? ? R G 76 R C 125 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog106 hydrog ? ? C G 72 N1 ? ? ? 1_555 C C 119 N3 ? ? R G 77 R C 124 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog107 hydrog ? ? C G 72 N2 ? ? ? 1_555 C C 119 O2 ? ? R G 77 R C 124 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog108 hydrog ? ? C G 72 O6 ? ? ? 1_555 C C 119 N4 ? ? R G 77 R C 124 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog109 hydrog ? ? C G 73 N2 ? ? ? 1_555 C A 118 N7 ? ? R G 78 R A 123 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? hydrog110 hydrog ? ? C G 73 N3 ? ? ? 1_555 C A 118 N6 ? ? R G 78 R A 123 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? hydrog111 hydrog ? ? C C 74 N4 ? ? ? 1_555 C C 117 O2 ? ? R C 79 R C 122 1_555 ? ? ? ? ? ? 'C-C MISPAIR' ? ? hydrog112 hydrog ? ? C G 75 N1 ? ? ? 1_555 C C 116 N3 ? ? R G 80 R C 121 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog113 hydrog ? ? C G 75 N2 ? ? ? 1_555 C C 116 O2 ? ? R G 80 R C 121 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog114 hydrog ? ? C G 75 O6 ? ? ? 1_555 C C 116 N4 ? ? R G 80 R C 121 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog115 hydrog ? ? C G 76 N1 ? ? ? 1_555 C C 115 N3 ? ? R G 81 R C 120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog116 hydrog ? ? C G 76 N2 ? ? ? 1_555 C C 115 O2 ? ? R G 81 R C 120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog117 hydrog ? ? C G 76 O6 ? ? ? 1_555 C C 115 N4 ? ? R G 81 R C 120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog118 hydrog ? ? C U 77 N3 ? ? ? 1_555 C U 114 O4 ? ? R U 82 R U 119 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? hydrog119 hydrog ? ? C U 77 O2 ? ? ? 1_555 C U 114 N3 ? ? R U 82 R U 119 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? hydrog120 hydrog ? ? C U 78 N3 ? ? ? 1_555 C U 113 O2 ? ? R U 83 R U 118 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? hydrog121 hydrog ? ? C U 78 O4 ? ? ? 1_555 C U 113 N3 ? ? R U 83 R U 118 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? hydrog122 hydrog ? ? C C 79 N3 ? ? ? 1_555 C G 112 N1 ? ? R C 84 R G 117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog123 hydrog ? ? C C 79 N4 ? ? ? 1_555 C G 112 O6 ? ? R C 84 R G 117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog124 hydrog ? ? C C 79 O2 ? ? ? 1_555 C G 112 N2 ? ? R C 84 R G 117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog125 hydrog ? ? C C 80 N3 ? ? ? 1_555 C G 111 N1 ? ? R C 85 R G 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog126 hydrog ? ? C C 80 N4 ? ? ? 1_555 C G 111 O6 ? ? R C 85 R G 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog127 hydrog ? ? C C 80 O2 ? ? ? 1_555 C G 111 N2 ? ? R C 85 R G 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog128 hydrog ? ? C C 81 N3 ? ? ? 1_555 C G 110 N1 ? ? R C 86 R G 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog129 hydrog ? ? C C 81 N4 ? ? ? 1_555 C G 110 O6 ? ? R C 86 R G 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog130 hydrog ? ? C C 81 O2 ? ? ? 1_555 C G 110 N2 ? ? R C 86 R G 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog131 hydrog ? ? C G 82 N2 ? ? ? 1_555 C A 109 N7 ? ? R G 87 R A 114 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? hydrog132 hydrog ? ? C G 82 N3 ? ? ? 1_555 C A 109 N6 ? ? R G 87 R A 114 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? hydrog133 hydrog ? ? C A 83 N6 ? ? ? 1_555 C G 108 N3 ? ? R A 88 R G 113 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? hydrog134 hydrog ? ? C A 83 N7 ? ? ? 1_555 C G 108 N2 ? ? R A 88 R G 113 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? hydrog135 hydrog ? ? C A 84 N1 ? ? ? 1_555 C G 107 N2 ? ? R A 89 R G 112 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? hydrog136 hydrog ? ? C A 84 N6 ? ? ? 1_555 C G 107 N3 ? ? R A 89 R G 112 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? hydrog137 hydrog ? ? C G 85 N1 ? ? ? 1_555 C U 106 O2 ? ? R G 90 R U 111 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? hydrog138 hydrog ? ? C G 85 O6 ? ? ? 1_555 C U 106 N3 ? ? R G 90 R U 111 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? hydrog139 hydrog ? ? C C 86 N3 ? ? ? 1_555 C G 105 N1 ? ? R C 91 R G 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog140 hydrog ? ? C C 86 N4 ? ? ? 1_555 C G 105 O6 ? ? R C 91 R G 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog141 hydrog ? ? C C 86 O2 ? ? ? 1_555 C G 105 N2 ? ? R C 91 R G 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog142 hydrog ? ? C C 87 N3 ? ? ? 1_555 C G 104 N1 ? ? R C 92 R G 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog143 hydrog ? ? C C 87 N4 ? ? ? 1_555 C G 104 O6 ? ? R C 92 R G 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog144 hydrog ? ? C C 87 O2 ? ? ? 1_555 C G 104 N2 ? ? R C 92 R G 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog145 hydrog ? ? C G 88 N1 ? ? ? 1_555 C C 103 O2 ? ? R G 93 R C 108 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? hydrog146 hydrog ? ? C G 88 N2 ? ? ? 1_555 C C 103 N3 ? ? R G 93 R C 108 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? hydrog147 hydrog ? ? C C 89 N3 ? ? ? 1_555 C G 102 N1 ? ? R C 94 R G 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog148 hydrog ? ? C C 89 N4 ? ? ? 1_555 C G 102 O6 ? ? R C 94 R G 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog149 hydrog ? ? C C 89 O2 ? ? ? 1_555 C G 102 N2 ? ? R C 94 R G 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog150 hydrog ? ? C C 90 N3 ? ? ? 1_555 C G 101 N1 ? ? R C 95 R G 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog151 hydrog ? ? C C 90 N4 ? ? ? 1_555 C G 101 O6 ? ? R C 95 R G 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog152 hydrog ? ? C C 90 O2 ? ? ? 1_555 C G 101 N2 ? ? R C 95 R G 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog153 hydrog ? ? C U 91 N3 ? ? ? 1_555 C A 100 N1 ? ? R U 96 R A 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog154 hydrog ? ? C U 91 O4 ? ? ? 1_555 C A 100 N6 ? ? R U 96 R A 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog155 hydrog ? ? C C 92 N3 ? ? ? 1_555 C G 99 N1 ? ? R C 97 R G 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog156 hydrog ? ? C C 92 N4 ? ? ? 1_555 C G 99 O6 ? ? R C 97 R G 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog157 hydrog ? ? C C 92 O2 ? ? ? 1_555 C G 99 N2 ? ? R C 97 R G 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog158 hydrog ? ? C U 93 N3 ? ? ? 1_555 C G 98 O6 ? ? R U 98 R G 103 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? hydrog159 hydrog ? ? C U 93 O2 ? ? ? 1_555 C G 98 N1 ? ? R U 98 R G 103 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? hydrog160 hydrog ? ? C G 94 N3 ? ? ? 1_555 C A 96 N6 ? ? R G 99 R A 101 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # _struct_sheet.id AA _struct_sheet.type ? _struct_sheet.number_strands 7 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AA 3 4 ? anti-parallel AA 4 5 ? anti-parallel AA 5 6 ? anti-parallel AA 6 7 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 CYS A 48 ? THR A 53 ? CYS A 48 THR A 53 AA 2 ASN A 37 ? THR A 43 ? ASN A 37 THR A 43 AA 3 ARG A 26 ? ARG A 32 ? ARG A 26 ARG A 32 AA 4 VAL B 26 ? TYR B 33 ? VAL B 26 TYR B 33 AA 5 LYS B 55 ? THR B 61 ? LYS B 55 THR B 61 AA 6 LYS B 66 ? SER B 72 ? LYS B 66 SER B 72 AA 7 VAL B 2 ? LEU B 3 ? VAL B 2 LEU B 3 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N THR A 53 ? N THR A 53 O LEU A 38 ? O LEU A 38 AA 2 3 N THR A 43 ? N THR A 43 O ARG A 26 ? O ARG A 26 AA 3 4 N TYR A 31 ? N TYR A 31 O VAL B 26 ? O VAL B 26 AA 4 5 N TYR B 33 ? N TYR B 33 O LYS B 55 ? O LYS B 55 AA 5 6 N ALA B 60 ? N ALA B 60 O ILE B 67 ? O ILE B 67 AA 6 7 N SER B 68 ? N SER B 68 O VAL B 2 ? O VAL B 2 # _database_PDB_matrix.entry_id 4UYK _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4UYK _atom_sites.fract_transf_matrix[1][1] 0.009915 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009915 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005064 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 1 ? ? ? A . n A 1 2 PRO 2 2 2 PRO PRO A . n A 1 3 GLN 3 3 3 GLN GLN A . n A 1 4 TYR 4 4 4 TYR TYR A . n A 1 5 GLN 5 5 5 GLN GLN A . n A 1 6 THR 6 6 6 THR THR A . n A 1 7 TRP 7 7 7 TRP TRP A . n A 1 8 GLU 8 8 8 GLU GLU A . n A 1 9 GLU 9 9 9 GLU GLU A . n A 1 10 PHE 10 10 10 PHE PHE A . n A 1 11 SER 11 11 11 SER SER A . n A 1 12 ARG 12 12 12 ARG ARG A . n A 1 13 ALA 13 13 13 ALA ALA A . n A 1 14 ALA 14 14 14 ALA ALA A . n A 1 15 GLU 15 15 15 GLU GLU A . n A 1 16 LYS 16 16 16 LYS LYS A . n A 1 17 LEU 17 17 17 LEU LEU A . n A 1 18 TYR 18 18 18 TYR TYR A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 ALA 20 20 20 ALA ALA A . n A 1 21 ASP 21 21 21 ASP ASP A . n A 1 22 PRO 22 22 22 PRO PRO A . n A 1 23 MSE 23 23 23 MSE MSE A . n A 1 24 LYS 24 24 24 LYS LYS A . n A 1 25 ALA 25 25 25 ALA ALA A . n A 1 26 ARG 26 26 26 ARG ARG A . n A 1 27 VAL 27 27 27 VAL VAL A . n A 1 28 VAL 28 28 28 VAL VAL A . n A 1 29 LEU 29 29 29 LEU LEU A . n A 1 30 LYS 30 30 30 LYS LYS A . n A 1 31 TYR 31 31 31 TYR TYR A . n A 1 32 ARG 32 32 32 ARG ARG A . n A 1 33 HIS 33 33 33 HIS HIS A . n A 1 34 SER 34 34 34 SER SER A . n A 1 35 ASP 35 35 35 ASP ASP A . n A 1 36 GLY 36 36 36 GLY GLY A . n A 1 37 ASN 37 37 37 ASN ASN A . n A 1 38 LEU 38 38 38 LEU LEU A . n A 1 39 CYS 39 39 39 CYS CYS A . n A 1 40 VAL 40 40 40 VAL VAL A . n A 1 41 LYS 41 41 41 LYS LYS A . n A 1 42 VAL 42 42 42 VAL VAL A . n A 1 43 THR 43 43 43 THR THR A . n A 1 44 ASP 44 44 44 ASP ASP A . n A 1 45 ASP 45 45 45 ASP ASP A . n A 1 46 LEU 46 46 46 LEU LEU A . n A 1 47 VAL 47 47 47 VAL VAL A . n A 1 48 CYS 48 48 48 CYS CYS A . n A 1 49 LEU 49 49 49 LEU LEU A . n A 1 50 VAL 50 50 50 VAL VAL A . n A 1 51 TYR 51 51 51 TYR TYR A . n A 1 52 LYS 52 52 52 LYS LYS A . n A 1 53 THR 53 53 53 THR THR A . n A 1 54 ASP 54 54 54 ASP ASP A . n A 1 55 GLN 55 55 55 GLN GLN A . n A 1 56 ALA 56 56 56 ALA ALA A . n A 1 57 GLN 57 57 57 GLN GLN A . n A 1 58 ASP 58 58 58 ASP ASP A . n A 1 59 VAL 59 59 59 VAL VAL A . n A 1 60 LYS 60 60 60 LYS LYS A . n A 1 61 LYS 61 61 61 LYS LYS A . n A 1 62 ILE 62 62 62 ILE ILE A . n A 1 63 GLU 63 63 63 GLU GLU A . n A 1 64 LYS 64 64 64 LYS LYS A . n A 1 65 PHE 65 65 65 PHE PHE A . n A 1 66 HIS 66 66 66 HIS HIS A . n A 1 67 SER 67 67 67 SER SER A . n A 1 68 GLN 68 68 68 GLN GLN A . n A 1 69 LEU 69 69 69 LEU LEU A . n A 1 70 MSE 70 70 70 MSE MSE A . n A 1 71 ARG 71 71 71 ARG ARG A . n A 1 72 LEU 72 72 72 LEU LEU A . n A 1 73 MSE 73 73 73 MSE MSE A . n A 1 74 VAL 74 74 74 VAL VAL A . n A 1 75 ALA 75 75 75 ALA ALA A . n A 1 76 LYS 76 76 76 LYS LYS A . n A 1 77 GLU 77 77 77 GLU GLU A . n A 1 78 ALA 78 78 78 ALA ALA A . n A 1 79 ARG 79 79 79 ARG ARG A . n A 1 80 ASN 80 80 80 ASN ASN A . n A 1 81 VAL 81 81 81 VAL VAL A . n A 1 82 THR 82 82 82 THR THR A . n A 1 83 MSE 83 83 83 MSE MSE A . n A 1 84 GLU 84 84 ? ? ? A . n A 1 85 THR 85 85 ? ? ? A . n B 2 1 MSE 1 1 1 MSE MSE B . n B 2 2 VAL 2 2 2 VAL VAL B . n B 2 3 LEU 3 3 3 LEU LEU B . n B 2 4 LEU 4 4 4 LEU LEU B . n B 2 5 GLU 5 5 5 GLU GLU B . n B 2 6 SER 6 6 6 SER SER B . n B 2 7 GLU 7 7 7 GLU GLU B . n B 2 8 GLN 8 8 8 GLN GLN B . n B 2 9 PHE 9 9 9 PHE PHE B . n B 2 10 LEU 10 10 10 LEU LEU B . n B 2 11 THR 11 11 11 THR THR B . n B 2 12 GLU 12 12 12 GLU GLU B . n B 2 13 LEU 13 13 13 LEU LEU B . n B 2 14 THR 14 14 14 THR THR B . n B 2 15 ARG 15 15 15 ARG ARG B . n B 2 16 LEU 16 16 16 LEU LEU B . n B 2 17 PHE 17 17 17 PHE PHE B . n B 2 18 GLN 18 18 18 GLN GLN B . n B 2 19 LYS 19 19 19 LYS LYS B . n B 2 20 CYS 20 20 20 CYS CYS B . n B 2 21 ARG 21 21 21 ARG ARG B . n B 2 22 THR 22 22 22 THR THR B . n B 2 23 SER 23 23 23 SER SER B . n B 2 24 GLY 24 24 24 GLY GLY B . n B 2 25 SER 25 25 25 SER SER B . n B 2 26 VAL 26 26 26 VAL VAL B . n B 2 27 TYR 27 27 27 TYR TYR B . n B 2 28 ILE 28 28 28 ILE ILE B . n B 2 29 THR 29 29 29 THR THR B . n B 2 30 LEU 30 30 30 LEU LEU B . n B 2 31 LYS 31 31 31 LYS LYS B . n B 2 32 LYS 32 32 32 LYS LYS B . n B 2 33 TYR 33 33 33 TYR TYR B . n B 2 34 ASP 34 34 34 ASP ASP B . n B 2 35 GLY 35 35 35 GLY GLY B . n B 2 36 ARG 36 36 36 ARG ARG B . n B 2 37 THR 37 37 37 THR THR B . n B 2 38 LYS 38 38 38 LYS LYS B . n B 2 39 PRO 39 39 39 PRO PRO B . n B 2 40 ILE 40 40 40 ILE ILE B . n B 2 41 PRO 41 41 41 PRO PRO B . n B 2 42 LYS 42 42 42 LYS LYS B . n B 2 43 LYS 43 43 ? ? ? B . n B 2 44 GLY 44 44 ? ? ? B . n B 2 45 THR 45 45 ? ? ? B . n B 2 46 VAL 46 46 ? ? ? B . n B 2 47 GLU 47 47 ? ? ? B . n B 2 48 GLY 48 48 ? ? ? B . n B 2 49 PHE 49 49 ? ? ? B . n B 2 50 GLU 50 50 50 GLU GLU B . n B 2 51 PRO 51 51 51 PRO PRO B . n B 2 52 ALA 52 52 52 ALA ALA B . n B 2 53 ASP 53 53 53 ASP ASP B . n B 2 54 ASN 54 54 54 ASN ASN B . n B 2 55 LYS 55 55 55 LYS LYS B . n B 2 56 CYS 56 56 56 CYS CYS B . n B 2 57 LEU 57 57 57 LEU LEU B . n B 2 58 LEU 58 58 58 LEU LEU B . n B 2 59 ARG 59 59 59 ARG ARG B . n B 2 60 ALA 60 60 60 ALA ALA B . n B 2 61 THR 61 61 61 THR THR B . n B 2 62 ASP 62 62 62 ASP ASP B . n B 2 63 GLY 63 63 63 GLY GLY B . n B 2 64 LYS 64 64 64 LYS LYS B . n B 2 65 LYS 65 65 65 LYS LYS B . n B 2 66 LYS 66 66 66 LYS LYS B . n B 2 67 ILE 67 67 67 ILE ILE B . n B 2 68 SER 68 68 68 SER SER B . n B 2 69 THR 69 69 69 THR THR B . n B 2 70 VAL 70 70 70 VAL VAL B . n B 2 71 VAL 71 71 71 VAL VAL B . n B 2 72 SER 72 72 72 SER SER B . n B 2 73 SER 73 73 73 SER SER B . n B 2 74 LYS 74 74 74 LYS LYS B . n B 2 75 GLU 75 75 75 GLU GLU B . n B 2 76 VAL 76 76 76 VAL VAL B . n B 2 77 ASN 77 77 77 ASN ASN B . n B 2 78 LYS 78 78 78 LYS LYS B . n B 2 79 PHE 79 79 79 PHE PHE B . n B 2 80 GLN 80 80 80 GLN GLN B . n B 2 81 MSE 81 81 81 MSE MSE B . n B 2 82 ALA 82 82 82 ALA ALA B . n B 2 83 TYR 83 83 83 TYR TYR B . n B 2 84 SER 84 84 84 SER SER B . n B 2 85 ASN 85 85 85 ASN ASN B . n B 2 86 LEU 86 86 86 LEU LEU B . n B 2 87 LEU 87 87 87 LEU LEU B . n B 2 88 ARG 88 88 88 ARG ARG B . n B 2 89 ALA 89 89 89 ALA ALA B . n B 2 90 ASN 90 90 90 ASN ASN B . n B 2 91 MSE 91 91 91 MSE MSE B . n B 2 92 ASP 92 92 92 ASP ASP B . n B 2 93 GLY 93 93 93 GLY GLY B . n B 2 94 LEU 94 94 94 LEU LEU B . n B 2 95 LYS 95 95 95 LYS LYS B . n B 2 96 LYS 96 96 96 LYS LYS B . n B 2 97 ARG 97 97 97 ARG ARG B . n B 2 98 ASP 98 98 ? ? ? B . n B 2 99 LYS 99 99 ? ? ? B . n B 2 100 LYS 100 100 ? ? ? B . n B 2 101 ASN 101 101 ? ? ? B . n B 2 102 LYS 102 102 ? ? ? B . n B 2 103 THR 103 103 ? ? ? B . n B 2 104 LYS 104 104 ? ? ? B . n B 2 105 LYS 105 105 ? ? ? B . n B 2 106 THR 106 106 ? ? ? B . n B 2 107 LYS 107 107 ? ? ? B . n C 3 1 G 1 6 6 G G R . n C 3 2 G 2 7 7 G G R . n C 3 3 G 3 8 8 G G R . n C 3 4 G 4 9 9 G G R . n C 3 5 C 5 10 10 C C R . n C 3 6 U 6 11 11 U U R . n C 3 7 A 7 12 12 A A R . n C 3 8 G 8 13 13 G G R . n C 3 9 G 9 14 14 G G R . n C 3 10 C 10 15 15 C C R . n C 3 11 C 11 16 16 C C R . n C 3 12 G 12 17 17 G G R . n C 3 13 G 13 18 18 G G R . n C 3 14 G 14 19 19 G G R . n C 3 15 G 15 20 20 G G R . n C 3 16 G 16 21 21 G G R . n C 3 17 G 17 22 22 G G R . n C 3 18 U 18 23 23 U U R . n C 3 19 U 19 24 24 U U R . n C 3 20 C 20 25 25 C C R . n C 3 21 G 21 26 26 G G R . n C 3 22 G 22 27 27 G G R . n C 3 23 C 23 28 28 C C R . n C 3 24 G 24 29 29 G G R . n C 3 25 U 25 30 30 U U R . n C 3 26 C 26 31 31 C C R . n C 3 27 C 27 32 32 C C R . n C 3 28 C 28 33 33 C C R . n C 3 29 C 29 34 34 C C R . n C 3 30 U 30 35 35 U U R . n C 3 31 G 31 36 36 G G R . n C 3 32 U 32 37 37 U U R . n C 3 33 A 33 38 38 A A R . n C 3 34 A 34 39 39 A A R . n C 3 35 C 35 40 40 C C R . n C 3 36 C 36 41 41 C C R . n C 3 37 G 37 42 42 G G R . n C 3 38 G 38 43 43 G G R . n C 3 39 A 39 44 44 A A R . n C 3 40 A 40 45 45 A A R . n C 3 41 A 41 46 46 A A R . n C 3 42 C 42 47 47 C C R . n C 3 43 C 43 48 48 C C R . n C 3 44 G 44 49 49 G G R . n C 3 45 C 45 50 50 C C R . n C 3 46 C 46 51 51 C C R . n C 3 47 G 47 52 52 G G R . n C 3 48 A 48 53 53 A A R . n C 3 49 U 49 54 54 U U R . n C 3 50 A 50 55 55 A A R . n C 3 51 U 51 56 56 U U R . n C 3 52 G 52 57 57 G G R . n C 3 53 C 53 58 58 C C R . n C 3 54 C 54 59 59 C C R . n C 3 55 G 55 60 60 G G R . n C 3 56 G 56 61 61 G G R . n C 3 57 G 57 62 62 G G R . n C 3 58 G 58 63 63 G G R . n C 3 59 C 59 64 64 C C R . n C 3 60 C 60 65 65 C C R . n C 3 61 G 61 66 66 G G R . n C 3 62 A 62 67 67 A A R . n C 3 63 A 63 68 68 A A R . n C 3 64 G 64 69 69 G G R . n C 3 65 C 65 70 70 C C R . n C 3 66 C 66 71 71 C C R . n C 3 67 C 67 72 72 C C R . n C 3 68 G 68 73 73 G G R . n C 3 69 A 69 74 74 A A R . n C 3 70 G 70 75 75 G G R . n C 3 71 G 71 76 76 G G R . n C 3 72 G 72 77 77 G G R . n C 3 73 G 73 78 78 G G R . n C 3 74 C 74 79 79 C C R . n C 3 75 G 75 80 80 G G R . n C 3 76 G 76 81 81 G G R . n C 3 77 U 77 82 82 U U R . n C 3 78 U 78 83 83 U U R . n C 3 79 C 79 84 84 C C R . n C 3 80 C 80 85 85 C C R . n C 3 81 C 81 86 86 C C R . n C 3 82 G 82 87 87 G G R . n C 3 83 A 83 88 88 A A R . n C 3 84 A 84 89 89 A A R . n C 3 85 G 85 90 90 G G R . n C 3 86 C 86 91 91 C C R . n C 3 87 C 87 92 92 C C R . n C 3 88 G 88 93 93 G G R . n C 3 89 C 89 94 94 C C R . n C 3 90 C 90 95 95 C C R . n C 3 91 U 91 96 96 U U R . n C 3 92 C 92 97 97 C C R . n C 3 93 U 93 98 98 U U R . n C 3 94 G 94 99 99 G G R . n C 3 95 U 95 100 100 U U R . n C 3 96 A 96 101 101 A A R . n C 3 97 A 97 102 102 A A R . n C 3 98 G 98 103 103 G G R . n C 3 99 G 99 104 104 G G R . n C 3 100 A 100 105 105 A A R . n C 3 101 G 101 106 106 G G R . n C 3 102 G 102 107 107 G G R . n C 3 103 C 103 108 108 C C R . n C 3 104 G 104 109 109 G G R . n C 3 105 G 105 110 110 G G R . n C 3 106 U 106 111 111 U U R . n C 3 107 G 107 112 112 G G R . n C 3 108 G 108 113 113 G G R . n C 3 109 A 109 114 114 A A R . n C 3 110 G 110 115 115 G G R . n C 3 111 G 111 116 116 G G R . n C 3 112 G 112 117 117 G G R . n C 3 113 U 113 118 118 U U R . n C 3 114 U 114 119 119 U U R . n C 3 115 C 115 120 120 C C R . n C 3 116 C 116 121 121 C C R . n C 3 117 C 117 122 122 C C R . n C 3 118 A 118 123 123 A A R . n C 3 119 C 119 124 124 C C R . n C 3 120 C 120 125 125 C C R . n C 3 121 C 121 126 126 C C R . n C 3 122 U 122 127 127 U U R . n C 3 123 C 123 128 128 C C R . n C 3 124 G 124 129 129 G G R . n C 3 125 G 125 130 130 G G R . n C 3 126 G 126 131 131 G G R . n C 3 127 C 127 132 132 C C R . n C 3 128 G 128 133 133 G G R . n C 3 129 U 129 134 134 U U R . n C 3 130 G 130 135 135 G G R . n C 3 131 C 131 136 136 C C R . n C 3 132 C 132 137 137 C C R . n C 3 133 U 133 138 138 U U R . n C 3 134 CCC 134 139 139 CCC CCC R . n # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 23 A MSE 23 ? MET SELENOMETHIONINE 2 A MSE 70 A MSE 70 ? MET SELENOMETHIONINE 3 A MSE 73 A MSE 73 ? MET SELENOMETHIONINE 4 A MSE 83 A MSE 83 ? MET SELENOMETHIONINE 5 B MSE 1 B MSE 1 ? MET SELENOMETHIONINE 6 B MSE 81 B MSE 81 ? MET SELENOMETHIONINE 7 B MSE 91 B MSE 91 ? MET SELENOMETHIONINE 8 C CCC 134 R CCC 139 ? C ? # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 6080 ? 1 MORE -48.6 ? 1 'SSA (A^2)' 29360 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-11-05 2 'Structure model' 1 1 2014-12-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 93.9689 57.9997 9.2527 0.4897 0.8557 0.7557 -0.0016 0.0586 0.0068 0.0204 3.9951 1.7651 -0.0338 -0.1080 -1.0708 0.0670 -0.0514 0.0489 -0.1309 -0.4436 -0.8341 -0.2435 0.8179 0.3766 'X-RAY DIFFRACTION' 2 ? refined 89.2823 51.2755 12.3263 0.5762 0.7538 0.2898 0.0649 -0.1105 -0.2454 5.4347 3.0253 4.3278 -1.7840 -2.0727 1.0933 -0.1229 -0.8320 0.1467 -0.0876 0.7300 -0.2189 0.4075 0.0072 -0.6071 'X-RAY DIFFRACTION' 3 ? refined 76.7156 43.7815 7.3572 0.6040 0.6956 0.3819 0.0874 -0.0155 0.0270 2.0998 0.7287 3.3652 0.1659 1.5837 1.2374 0.2997 -0.3600 0.0861 0.0555 -0.1080 0.0813 0.5004 -0.2427 -0.1917 'X-RAY DIFFRACTION' 4 ? refined 78.9886 46.8283 13.9290 0.8135 0.8449 0.1325 0.0758 0.0583 0.0401 2.5155 3.1019 2.2616 -1.5530 0.8181 1.5459 -0.1611 -0.4413 -0.0585 0.3480 0.0837 0.1876 0.3494 -0.3395 0.0774 'X-RAY DIFFRACTION' 5 ? refined 81.6864 37.3684 -12.4402 0.6970 0.5738 0.3764 -0.0422 -0.0276 0.0121 0.4647 1.6873 0.8170 -0.8709 -0.5516 1.0188 -0.0738 -0.1026 -0.0465 -0.0528 0.2524 0.0908 0.0829 0.0631 -0.1786 'X-RAY DIFFRACTION' 6 ? refined 124.5581 30.7150 16.4420 1.6038 0.9007 0.5646 0.0731 -0.5660 0.2101 3.5925 0.2228 6.5571 -0.7722 4.3450 -1.1131 0.2060 0.4723 -0.7438 0.2407 -0.0493 0.0984 -1.0379 0.9666 -0.1568 'X-RAY DIFFRACTION' 7 ? refined 83.9587 51.5996 -21.0442 0.6851 0.5483 0.2626 -0.0062 0.0835 0.0159 2.4602 2.0884 0.5654 -2.0134 -0.2286 0.5075 0.3062 0.0607 0.1972 -0.4767 -0.0479 -0.2728 -0.2233 0.3315 -0.2583 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 2 ? ? A 25 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 26 ? ? A 82 ? ? ? ? 'X-RAY DIFFRACTION' 3 3 B 1 ? ? B 42 ? ? ? ? 'X-RAY DIFFRACTION' 4 4 B 50 ? ? B 97 ? ? ? ? 'X-RAY DIFFRACTION' 5 5 R 6 ? ? R 85 ? ? ? ? 'X-RAY DIFFRACTION' 6 6 R 86 ? ? R 117 ? ? ? ? 'X-RAY DIFFRACTION' 7 7 R 118 ? ? R 139 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.8.0071 ? 1 XDS 'data reduction' . ? 2 XSCALE 'data scaling' . ? 3 SHARP phasing . ? 4 # _pdbx_entry_details.entry_id 4UYK _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;HUMAN SRP9 RESIDUES 1 TO 85 WERE EXPRESSED IN THIS WORK HUMAN SRP14 RESIDUES 1 TO 107 WERE EXPRESSED IN THIS WORK THE P. HORIKOSHII SRP ALU RNA SEQUENCE HAS THE S-DOMAIN DELETED, AND REPLACED BY A TETRA LOOP. CCC (CYCLIC CYTIDINE), PRODUCED DURING IN-VITRO TRANSCRIPTION. ; # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 P _pdbx_validate_rmsd_bond.auth_asym_id_1 R _pdbx_validate_rmsd_bond.auth_comp_id_1 G _pdbx_validate_rmsd_bond.auth_seq_id_1 6 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 OP3 _pdbx_validate_rmsd_bond.auth_asym_id_2 R _pdbx_validate_rmsd_bond.auth_comp_id_2 G _pdbx_validate_rmsd_bond.auth_seq_id_2 6 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.491 _pdbx_validate_rmsd_bond.bond_target_value 1.607 _pdbx_validate_rmsd_bond.bond_deviation -0.116 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.012 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 21 ? ? -163.36 91.53 2 1 ASP A 45 ? ? 72.75 -18.06 3 1 LYS A 76 ? ? -61.83 -72.59 4 1 LYS B 31 ? ? -170.45 132.32 5 1 ARG B 36 ? ? -37.81 121.55 6 1 LYS B 64 ? ? -102.84 -64.98 7 1 LYS B 74 ? ? -37.94 -39.57 8 1 MSE B 91 ? ? -91.08 37.94 9 1 LEU B 94 ? ? -128.89 -169.95 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 B LYS 42 ? CG ? B LYS 42 CG 2 1 Y 1 B LYS 42 ? CD ? B LYS 42 CD 3 1 Y 1 B LYS 42 ? CE ? B LYS 42 CE 4 1 Y 1 B LYS 42 ? NZ ? B LYS 42 NZ 5 1 Y 1 B GLU 50 ? CG ? B GLU 50 CG 6 1 Y 1 B GLU 50 ? CD ? B GLU 50 CD 7 1 Y 1 B GLU 50 ? OE1 ? B GLU 50 OE1 8 1 Y 1 B GLU 50 ? OE2 ? B GLU 50 OE2 9 1 Y 1 B ARG 97 ? CG ? B ARG 97 CG 10 1 Y 1 B ARG 97 ? CD ? B ARG 97 CD 11 1 Y 1 B ARG 97 ? NE ? B ARG 97 NE 12 1 Y 1 B ARG 97 ? CZ ? B ARG 97 CZ 13 1 Y 1 B ARG 97 ? NH1 ? B ARG 97 NH1 14 1 Y 1 B ARG 97 ? NH2 ? B ARG 97 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE 1 ? A MSE 1 2 1 Y 1 A GLU 84 ? A GLU 84 3 1 Y 1 A THR 85 ? A THR 85 4 1 Y 1 B LYS 43 ? B LYS 43 5 1 Y 1 B GLY 44 ? B GLY 44 6 1 Y 1 B THR 45 ? B THR 45 7 1 Y 1 B VAL 46 ? B VAL 46 8 1 Y 1 B GLU 47 ? B GLU 47 9 1 Y 1 B GLY 48 ? B GLY 48 10 1 Y 1 B PHE 49 ? B PHE 49 11 1 Y 1 B ASP 98 ? B ASP 98 12 1 Y 1 B LYS 99 ? B LYS 99 13 1 Y 1 B LYS 100 ? B LYS 100 14 1 Y 1 B ASN 101 ? B ASN 101 15 1 Y 1 B LYS 102 ? B LYS 102 16 1 Y 1 B THR 103 ? B THR 103 17 1 Y 1 B LYS 104 ? B LYS 104 18 1 Y 1 B LYS 105 ? B LYS 105 19 1 Y 1 B THR 106 ? B THR 106 20 1 Y 1 B LYS 107 ? B LYS 107 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4UYK 'double helix' 4UYK 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 C G 1 1_555 C CCC 134 1_555 0.063 -0.048 0.152 -8.944 -15.213 0.412 1 R_G6:CCC139_R R 6 ? R 139 ? 19 1 1 C G 2 1_555 C U 133 1_555 -1.863 -0.379 0.447 -0.839 -9.563 0.581 2 R_G7:U138_R R 7 ? R 138 ? 28 1 1 C G 3 1_555 C C 132 1_555 -0.374 -0.080 0.109 -2.220 -13.443 0.953 3 R_G8:C137_R R 8 ? R 137 ? 19 1 1 C G 4 1_555 C C 131 1_555 0.005 -0.187 0.052 -10.557 -19.313 0.158 4 R_G9:C136_R R 9 ? R 136 ? 19 1 1 C C 5 1_555 C G 130 1_555 -0.108 -0.163 0.744 -6.747 -11.947 -3.652 5 R_C10:G135_R R 10 ? R 135 ? 19 1 1 C U 6 1_555 C A 62 1_555 4.452 -2.454 -0.640 6.003 -20.055 -92.721 6 R_U11:A67_R R 11 ? R 67 ? 24 4 1 C A 7 1_555 C G 61 1_555 -7.052 -4.554 -0.525 -8.186 -10.501 -8.196 7 R_A12:G66_R R 12 ? R 66 ? 11 10 1 C G 8 1_555 C C 60 1_555 -0.283 -0.053 -0.021 -0.358 -14.015 -0.636 8 R_G13:C65_R R 13 ? R 65 ? 19 1 1 C G 9 1_555 C C 59 1_555 -0.069 -0.152 0.174 -3.200 -6.444 -1.988 9 R_G14:C64_R R 14 ? R 64 ? 19 1 1 C C 10 1_555 C G 58 1_555 -0.013 -0.205 0.299 -2.461 -4.824 -2.652 10 R_C15:G63_R R 15 ? R 63 ? 19 1 1 C C 11 1_555 C G 57 1_555 -0.401 0.132 -0.581 9.404 6.898 4.562 11 R_C16:G62_R R 16 ? R 62 ? 19 1 1 C C 35 1_555 C G 56 1_555 0.030 0.186 -0.439 16.906 -10.276 4.244 12 R_C40:G61_R R 40 ? R 61 ? 19 1 1 C C 36 1_555 C G 55 1_555 0.256 -0.064 -0.666 10.619 -9.282 6.006 13 R_C41:G60_R R 41 ? R 60 ? 19 1 1 C G 37 1_555 C C 54 1_555 0.012 0.021 0.217 -1.503 -8.248 4.243 14 R_G42:C59_R R 42 ? R 59 ? 19 1 1 C G 38 1_555 C C 53 1_555 -0.189 0.052 0.387 -5.129 -5.083 2.401 15 R_G43:C58_R R 43 ? R 58 ? 19 1 1 C A 39 1_555 C G 52 1_555 0.080 1.587 -0.053 -5.224 6.238 -19.649 16 R_A44:G57_R R 44 ? R 57 ? 8 1 1 C G 12 1_555 C U 30 1_555 -2.806 -0.855 -0.318 -9.597 -7.826 -4.902 17 R_G17:U35_R R 17 ? R 35 ? 28 1 1 C G 13 1_555 C C 29 1_555 -0.209 0.121 0.121 -2.116 -5.656 2.752 18 R_G18:C34_R R 18 ? R 34 ? 19 1 1 C G 14 1_555 C C 28 1_555 -0.157 0.084 -0.053 -2.384 -9.827 2.281 19 R_G19:C33_R R 19 ? R 33 ? 19 1 1 C G 15 1_555 C C 27 1_555 -0.005 -0.033 -0.145 -11.640 -8.409 3.606 20 R_G20:C32_R R 20 ? R 32 ? 19 1 1 C G 16 1_555 C C 26 1_555 0.195 0.160 -0.510 -23.834 -23.078 2.923 21 R_G21:C31_R R 21 ? R 31 ? 19 1 1 C C 20 1_555 C G 47 1_555 -0.297 0.038 -0.090 -1.260 -3.539 -1.629 22 R_C25:G52_R R 25 ? R 52 ? 19 1 1 C G 21 1_555 C C 46 1_555 -0.052 -0.145 0.023 -5.356 -20.376 2.701 23 R_G26:C51_R R 26 ? R 51 ? 19 1 1 C G 22 1_555 C C 45 1_555 -0.280 -0.038 -0.086 -5.882 -9.908 3.296 24 R_G27:C50_R R 27 ? R 50 ? 19 1 1 C C 23 1_555 C G 44 1_555 0.331 -0.042 -0.008 3.002 -12.270 3.552 25 R_C28:G49_R R 28 ? R 49 ? 19 1 1 C G 24 1_555 C C 43 1_555 0.168 0.018 -0.355 -10.521 -7.696 0.399 26 R_G29:C48_R R 29 ? R 48 ? 19 1 1 C U 25 1_555 C A 41 1_555 -0.916 3.676 -0.117 6.964 -4.820 -72.189 27 R_U30:A46_R R 30 ? R 46 ? 23 3 1 C A 63 1_555 C G 128 1_555 -7.367 -5.048 0.083 -33.666 24.892 -18.741 28 R_A68:G133_R R 68 ? R 133 ? ? ? 1 C G 64 1_555 C C 127 1_555 -0.107 -0.045 0.195 3.807 -1.444 2.699 29 R_G69:C132_R R 69 ? R 132 ? 19 1 1 C C 65 1_555 C G 126 1_555 0.156 -0.005 -0.236 17.434 -8.688 -1.725 30 R_C70:G131_R R 70 ? R 131 ? 19 1 1 C C 66 1_555 C G 125 1_555 0.266 -0.069 -0.118 8.770 -12.155 4.597 31 R_C71:G130_R R 71 ? R 130 ? 19 1 1 C C 67 1_555 C G 124 1_555 0.340 -0.121 -0.027 2.685 -3.180 4.331 32 R_C72:G129_R R 72 ? R 129 ? 19 1 1 C G 68 1_555 C C 123 1_555 0.181 -0.090 -0.621 -12.517 -17.790 -4.216 33 R_G73:C128_R R 73 ? R 128 ? 19 1 1 C A 69 1_555 C U 122 1_555 0.099 0.076 -0.528 -8.514 -13.316 1.069 34 R_A74:U127_R R 74 ? R 127 ? 20 1 1 C G 70 1_555 C C 121 1_555 -0.352 -0.001 -0.344 -4.229 -8.714 5.744 35 R_G75:C126_R R 75 ? R 126 ? 19 1 1 C G 71 1_555 C C 120 1_555 -0.043 0.027 -0.193 0.521 -4.599 4.490 36 R_G76:C125_R R 76 ? R 125 ? 19 1 1 C G 72 1_555 C C 119 1_555 -0.042 -0.032 -0.696 -14.777 -10.235 0.266 37 R_G77:C124_R R 77 ? R 124 ? 19 1 1 C G 73 1_555 C A 118 1_555 7.130 -4.248 0.357 -15.294 -3.421 -5.334 38 R_G78:A123_R R 78 ? R 123 ? 11 10 1 C C 74 1_555 C C 117 1_555 -3.286 -1.526 -0.286 -22.325 -22.504 30.639 39 R_C79:C122_R R 79 ? R 122 ? ? 1 1 C G 75 1_555 C C 116 1_555 -0.154 0.033 0.069 -2.772 -7.868 4.602 40 R_G80:C121_R R 80 ? R 121 ? 19 1 1 C G 76 1_555 C C 115 1_555 -0.142 -0.040 -0.540 -6.894 -19.109 7.594 41 R_G81:C120_R R 81 ? R 120 ? 19 1 1 C U 77 1_555 C U 114 1_555 2.426 -1.511 0.352 12.105 -24.243 19.351 42 R_U82:U119_R R 82 ? R 119 ? 16 1 1 C U 78 1_555 C U 113 1_555 -2.730 -1.553 0.122 -5.980 -23.573 18.994 43 R_U83:U118_R R 83 ? R 118 ? 16 1 1 C C 79 1_555 C G 112 1_555 0.585 0.353 -0.557 6.922 -21.530 11.735 44 R_C84:G117_R R 84 ? R 117 ? 19 1 1 C C 80 1_555 C G 111 1_555 0.740 0.089 0.358 -4.536 -10.050 5.331 45 R_C85:G116_R R 85 ? R 116 ? 19 1 1 C C 81 1_555 C G 110 1_555 -0.056 0.353 0.032 11.271 -8.718 3.061 46 R_C86:G115_R R 86 ? R 115 ? 19 1 1 C G 82 1_555 C A 109 1_555 7.018 -4.114 -0.322 15.936 -16.081 -3.367 47 R_G87:A114_R R 87 ? R 114 ? 11 6 1 C A 83 1_555 C G 108 1_555 -6.298 -4.715 0.922 -21.243 16.279 8.112 48 R_A88:G113_R R 88 ? R 113 ? 11 9 1 C A 84 1_555 C G 107 1_555 -3.273 4.339 -0.569 19.632 -3.535 77.683 49 R_A89:G112_R R 89 ? R 112 ? 10 6 1 C G 85 1_555 C U 106 1_555 -2.584 -0.203 -0.476 6.675 -11.938 11.307 50 R_G90:U111_R R 90 ? R 111 ? 28 1 1 C C 86 1_555 C G 105 1_555 0.018 -0.096 -0.775 0.994 -17.120 -1.031 51 R_C91:G110_R R 91 ? R 110 ? 19 1 1 C C 87 1_555 C G 104 1_555 -0.064 0.489 0.427 -24.277 -6.880 7.322 52 R_C92:G109_R R 92 ? R 109 ? 19 1 1 C G 88 1_555 C C 103 1_555 -0.816 0.489 0.664 -0.860 -19.358 19.759 53 R_G93:C108_R R 93 ? R 108 ? 22 1 1 C C 89 1_555 C G 102 1_555 0.634 -0.081 -0.447 15.201 -32.172 2.572 54 R_C94:G107_R R 94 ? R 107 ? 19 1 1 C C 90 1_555 C G 101 1_555 0.415 -0.113 0.072 2.137 -23.228 -2.532 55 R_C95:G106_R R 95 ? R 106 ? 19 1 1 C U 91 1_555 C A 100 1_555 -0.044 -0.087 0.035 -0.670 -17.772 2.325 56 R_U96:A105_R R 96 ? R 105 ? 20 1 1 C C 92 1_555 C G 99 1_555 0.674 0.000 -0.161 8.285 -13.782 -1.777 57 R_C97:G104_R R 97 ? R 104 ? 19 1 1 C U 93 1_555 C G 98 1_555 2.404 -0.507 -0.564 2.229 -13.612 -9.072 58 R_U98:G103_R R 98 ? R 103 ? 28 1 1 C G 94 1_555 C A 96 1_555 4.458 -3.830 -0.981 39.714 -2.803 -46.270 59 R_G99:A101_R R 99 ? R 101 ? ? ? # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 C G 1 1_555 C CCC 134 1_555 C G 2 1_555 C U 133 1_555 -0.198 -2.284 2.786 -5.317 4.914 25.508 -6.014 -0.684 2.306 10.852 11.743 26.499 1 RR_G6G7:U138CCC139_RR R 6 ? R 139 ? R 7 ? R 138 ? 1 C G 2 1_555 C U 133 1_555 C G 3 1_555 C C 132 1_555 -0.222 -1.756 3.277 0.762 5.990 36.628 -3.528 0.447 2.959 9.452 -1.203 37.106 2 RR_G7G8:C137U138_RR R 7 ? R 138 ? R 8 ? R 137 ? 1 C G 3 1_555 C C 132 1_555 C G 4 1_555 C C 131 1_555 0.559 -1.938 3.457 4.226 8.142 32.909 -4.592 -0.284 2.955 14.036 -7.285 34.130 3 RR_G8G9:C136C137_RR R 8 ? R 137 ? R 9 ? R 136 ? 1 C G 4 1_555 C C 131 1_555 C C 5 1_555 C G 130 1_555 0.685 -2.141 3.128 0.649 -0.267 30.780 -3.983 -1.169 3.159 -0.502 -1.222 30.787 4 RR_G9C10:G135C136_RR R 9 ? R 136 ? R 10 ? R 135 ? 1 C C 5 1_555 C G 130 1_555 C U 6 1_555 C A 62 1_555 -2.009 -1.651 2.963 7.148 -2.221 77.346 -1.261 1.782 2.837 -1.774 -5.707 77.651 5 RR_C10U11:A67G135_RR R 10 ? R 135 ? R 11 ? R 67 ? 1 C U 6 1_555 C A 62 1_555 C A 7 1_555 C G 61 1_555 4.626 -0.456 3.562 5.914 7.014 -12.924 -2.706 20.467 1.391 -27.128 22.875 -15.838 6 RR_U11A12:G66A67_RR R 11 ? R 67 ? R 12 ? R 66 ? 1 C A 7 1_555 C G 61 1_555 C G 8 1_555 C C 60 1_555 0.668 -0.772 3.403 -1.436 -0.814 60.357 -0.726 -0.737 3.397 -0.809 1.428 60.377 7 RR_A12G13:C65G66_RR R 12 ? R 66 ? R 13 ? R 65 ? 1 C G 8 1_555 C C 60 1_555 C G 9 1_555 C C 59 1_555 -0.107 -1.933 3.298 -2.782 3.514 33.229 -3.917 -0.263 3.082 6.110 4.838 33.521 8 RR_G13G14:C64C65_RR R 13 ? R 65 ? R 14 ? R 64 ? 1 C G 9 1_555 C C 59 1_555 C C 10 1_555 C G 58 1_555 -0.208 -1.816 3.230 0.752 3.175 32.495 -3.758 0.494 3.038 5.655 -1.340 32.654 9 RR_G14C15:G63C64_RR R 14 ? R 64 ? R 15 ? R 63 ? 1 C C 10 1_555 C G 58 1_555 C C 11 1_555 C G 57 1_555 0.925 -2.007 3.095 5.242 -0.604 25.604 -4.277 -0.645 3.262 -1.344 -11.670 26.133 10 RR_C15C16:G62G63_RR R 15 ? R 63 ? R 16 ? R 62 ? 1 C C 11 1_555 C G 57 1_555 C C 35 1_555 C G 56 1_555 -0.475 -1.845 3.366 -0.076 -2.460 30.933 -2.951 0.872 3.500 -4.603 0.142 31.028 11 RR_C16C40:G61G62_RR R 16 ? R 62 ? R 40 ? R 61 ? 1 C C 35 1_555 C G 56 1_555 C C 36 1_555 C G 55 1_555 -0.403 -1.629 3.451 0.155 4.688 33.471 -3.578 0.719 3.198 8.091 -0.267 33.789 12 RR_C40C41:G60G61_RR R 40 ? R 61 ? R 41 ? R 60 ? 1 C C 36 1_555 C G 55 1_555 C G 37 1_555 C C 54 1_555 -0.214 -1.921 3.410 -5.894 15.621 30.486 -5.425 -0.471 2.200 27.289 10.297 34.663 13 RR_C41G42:C59G60_RR R 41 ? R 60 ? R 42 ? R 59 ? 1 C G 37 1_555 C C 54 1_555 C G 38 1_555 C C 53 1_555 -0.034 -2.050 3.136 -1.169 5.519 32.798 -4.418 -0.118 2.764 9.685 2.052 33.267 14 RR_G42G43:C58C59_RR R 42 ? R 59 ? R 43 ? R 58 ? 1 C G 38 1_555 C C 53 1_555 C A 39 1_555 C G 52 1_555 -1.003 -2.081 3.163 6.619 7.756 34.049 -4.402 2.490 2.415 12.891 -11.002 35.500 15 RR_G43A44:G57C58_RR R 43 ? R 58 ? R 44 ? R 57 ? 1 C G 12 1_555 C U 30 1_555 C G 13 1_555 C C 29 1_555 -0.459 -2.109 3.145 -3.439 0.189 36.032 -3.421 0.271 3.163 0.305 5.543 36.191 16 RR_G17G18:C34U35_RR R 17 ? R 35 ? R 18 ? R 34 ? 1 C G 13 1_555 C C 29 1_555 C G 14 1_555 C C 28 1_555 0.268 -2.098 3.315 0.556 0.531 31.112 -4.013 -0.393 3.283 0.990 -1.037 31.121 17 RR_G18G19:C33C34_RR R 18 ? R 34 ? R 19 ? R 33 ? 1 C G 14 1_555 C C 28 1_555 C G 15 1_555 C C 27 1_555 -0.333 -2.007 3.411 0.070 7.207 31.825 -4.799 0.606 2.898 12.936 -0.126 32.610 18 RR_G19G20:C32C33_RR R 19 ? R 33 ? R 20 ? R 32 ? 1 C G 15 1_555 C C 27 1_555 C G 16 1_555 C C 26 1_555 0.112 -1.732 3.606 5.869 7.757 37.330 -3.637 0.596 3.178 11.873 -8.984 38.533 19 RR_G20G21:C31C32_RR R 20 ? R 32 ? R 21 ? R 31 ? 1 C C 20 1_555 C G 47 1_555 C G 21 1_555 C C 46 1_555 0.606 -1.637 3.303 -2.042 14.670 33.434 -4.458 -1.225 2.363 24.085 3.352 36.482 20 RR_C25G26:C51G52_RR R 25 ? R 52 ? R 26 ? R 51 ? 1 C G 21 1_555 C C 46 1_555 C G 22 1_555 C C 45 1_555 -1.092 -2.485 3.048 -5.710 8.997 25.909 -6.939 1.116 2.260 19.071 12.103 27.980 21 RR_G26G27:C50C51_RR R 26 ? R 51 ? R 27 ? R 50 ? 1 C G 22 1_555 C C 45 1_555 C C 23 1_555 C G 44 1_555 0.579 -1.337 2.923 0.557 8.841 34.342 -3.295 -0.882 2.521 14.673 -0.925 35.433 22 RR_G27C28:G49C50_RR R 27 ? R 50 ? R 28 ? R 49 ? 1 C C 23 1_555 C G 44 1_555 C G 24 1_555 C C 43 1_555 0.800 -2.154 3.384 7.100 14.346 33.719 -5.156 -0.371 2.417 23.180 -11.473 37.225 23 RR_C28G29:C48G49_RR R 28 ? R 49 ? R 29 ? R 48 ? 1 C G 24 1_555 C C 43 1_555 C U 25 1_555 C A 41 1_555 1.211 -2.157 2.784 0.295 8.364 67.893 -2.176 -1.069 2.540 7.460 -0.263 68.345 24 RR_G29U30:A46C48_RR R 29 ? R 48 ? R 30 ? R 46 ? 1 C A 63 1_555 C G 128 1_555 C G 64 1_555 C C 127 1_555 2.644 -1.297 2.259 6.487 -6.464 49.294 -1.175 -2.765 2.703 -7.673 -7.700 50.085 25 RR_A68G69:C132G133_RR R 68 ? R 133 ? R 69 ? R 132 ? 1 C G 64 1_555 C C 127 1_555 C C 65 1_555 C G 126 1_555 -0.244 -1.099 2.968 3.322 8.937 32.542 -3.126 0.880 2.549 15.537 -5.775 33.873 26 RR_G69C70:G131C132_RR R 69 ? R 132 ? R 70 ? R 131 ? 1 C C 65 1_555 C G 126 1_555 C C 66 1_555 C G 125 1_555 0.312 -1.960 3.299 -1.772 9.072 33.770 -4.535 -0.768 2.680 15.264 2.982 34.976 27 RR_C70C71:G130G131_RR R 70 ? R 131 ? R 71 ? R 130 ? 1 C C 66 1_555 C G 125 1_555 C C 67 1_555 C G 124 1_555 -0.558 -1.971 3.362 -2.885 5.862 31.729 -4.551 0.500 2.997 10.582 5.209 32.378 28 RR_C71C72:G129G130_RR R 71 ? R 130 ? R 72 ? R 129 ? 1 C C 67 1_555 C G 124 1_555 C G 68 1_555 C C 123 1_555 -0.428 -1.826 3.862 4.301 7.171 27.199 -5.532 1.959 3.183 14.811 -8.883 28.432 29 RR_C72G73:C128G129_RR R 72 ? R 129 ? R 73 ? R 128 ? 1 C G 68 1_555 C C 123 1_555 C A 69 1_555 C U 122 1_555 0.218 -1.359 3.243 -0.657 6.444 31.263 -3.583 -0.510 2.907 11.799 1.202 31.910 30 RR_G73A74:U127C128_RR R 73 ? R 128 ? R 74 ? R 127 ? 1 C A 69 1_555 C U 122 1_555 C G 70 1_555 C C 121 1_555 0.346 -1.521 3.318 -1.270 3.769 27.731 -4.017 -1.010 3.070 7.812 2.633 28.010 31 RR_A74G75:C126U127_RR R 74 ? R 127 ? R 75 ? R 126 ? 1 C G 70 1_555 C C 121 1_555 C G 71 1_555 C C 120 1_555 0.498 -1.751 3.053 -0.645 7.479 31.925 -4.226 -0.980 2.578 13.368 1.153 32.773 32 RR_G75G76:C125C126_RR R 75 ? R 126 ? R 76 ? R 125 ? 1 C G 71 1_555 C C 120 1_555 C G 72 1_555 C C 119 1_555 0.023 -2.163 3.703 3.720 12.300 29.671 -6.092 0.624 2.608 22.725 -6.872 32.277 33 RR_G76G77:C124C125_RR R 76 ? R 125 ? R 77 ? R 124 ? 1 C G 72 1_555 C C 119 1_555 C G 73 1_555 C A 118 1_555 -0.207 -1.120 3.327 0.029 10.367 66.671 -1.408 0.188 3.143 9.373 -0.026 67.380 34 RR_G77G78:A123C124_RR R 77 ? R 124 ? R 78 ? R 123 ? 1 C G 73 1_555 C A 118 1_555 C C 74 1_555 C C 117 1_555 2.201 -2.225 3.408 21.386 5.958 -4.686 4.205 10.805 -0.781 -20.995 75.360 -22.684 35 RR_G78C79:C122A123_RR R 78 ? R 123 ? R 79 ? R 122 ? 1 C C 74 1_555 C C 117 1_555 C G 75 1_555 C C 116 1_555 -1.143 -0.416 2.863 -7.852 9.615 42.222 -1.371 0.862 2.865 13.014 10.627 43.929 36 RR_C79G80:C121C122_RR R 79 ? R 122 ? R 80 ? R 121 ? 1 C G 75 1_555 C C 116 1_555 C G 76 1_555 C C 115 1_555 0.275 -2.098 3.610 4.880 4.834 20.329 -7.677 1.320 3.018 13.217 -13.342 21.446 37 RR_G80G81:C120C121_RR R 80 ? R 121 ? R 81 ? R 120 ? 1 C G 76 1_555 C C 115 1_555 C U 77 1_555 C U 114 1_555 0.889 -0.805 2.707 -5.535 4.976 42.175 -1.499 -1.660 2.470 6.851 7.621 42.797 38 RR_G81U82:U119C120_RR R 81 ? R 120 ? R 82 ? R 119 ? 1 C U 77 1_555 C U 114 1_555 C U 78 1_555 C U 113 1_555 -0.067 -2.261 3.031 -2.166 17.906 19.285 -8.146 -0.238 0.711 43.142 5.218 26.347 39 RR_U82U83:U118U119_RR R 82 ? R 119 ? R 83 ? R 118 ? 1 C U 78 1_555 C U 113 1_555 C C 79 1_555 C G 112 1_555 -0.671 -0.454 3.201 5.650 -2.263 43.265 -0.400 1.427 3.113 -3.051 -7.618 43.671 40 RR_U83C84:G117U118_RR R 83 ? R 118 ? R 84 ? R 117 ? 1 C C 79 1_555 C G 112 1_555 C C 80 1_555 C G 111 1_555 -0.385 -1.464 3.431 -4.327 17.258 35.749 -4.078 0.083 2.521 26.209 6.571 39.802 41 RR_C84C85:G116G117_RR R 84 ? R 117 ? R 85 ? R 116 ? 1 C C 80 1_555 C G 111 1_555 C C 81 1_555 C G 110 1_555 0.190 -2.249 2.773 5.826 3.335 20.143 -7.214 1.418 2.336 9.210 -16.090 21.221 42 RR_C85C86:G115G116_RR R 85 ? R 116 ? R 86 ? R 115 ? 1 C C 81 1_555 C G 110 1_555 C G 82 1_555 C A 109 1_555 -0.292 -0.965 3.557 -0.613 -0.874 61.903 -0.894 0.253 3.571 -0.850 0.596 61.912 43 RR_C86G87:A114G115_RR R 86 ? R 115 ? R 87 ? R 114 ? 1 C G 82 1_555 C A 109 1_555 C A 83 1_555 C G 108 1_555 1.309 -2.024 3.882 6.637 -0.603 -11.198 9.629 13.551 2.580 2.788 30.701 -13.025 44 RR_G87A88:G113A114_RR R 87 ? R 114 ? R 88 ? R 113 ? 1 C A 83 1_555 C G 108 1_555 C A 84 1_555 C G 107 1_555 -0.709 3.092 -0.427 168.447 -26.071 -149.149 -1.552 -0.390 -0.101 13.062 84.393 -177.463 45 RR_A88A89:G112G113_RR R 88 ? R 113 ? R 89 ? R 112 ? 1 C A 84 1_555 C G 107 1_555 C G 85 1_555 C U 106 1_555 -2.207 -1.861 -2.110 105.075 -123.849 47.322 -1.685 0.483 -0.863 -65.920 -55.927 163.906 46 RR_A89G90:U111G112_RR R 89 ? R 112 ? R 90 ? R 111 ? 1 C G 85 1_555 C U 106 1_555 C C 86 1_555 C G 105 1_555 -0.481 -1.346 3.443 1.610 3.846 44.170 -2.152 0.791 3.302 5.101 -2.135 44.357 47 RR_G90C91:G110U111_RR R 90 ? R 111 ? R 91 ? R 110 ? 1 C C 86 1_555 C G 105 1_555 C C 87 1_555 C G 104 1_555 -0.363 -1.759 4.141 -5.937 8.084 31.107 -4.829 -0.602 3.590 14.606 10.726 32.646 48 RR_C91C92:G109G110_RR R 91 ? R 110 ? R 92 ? R 109 ? 1 C C 87 1_555 C G 104 1_555 C G 88 1_555 C C 103 1_555 0.578 -1.196 2.280 0.623 13.559 24.828 -4.374 -1.096 1.456 28.938 -1.329 28.245 49 RR_C92G93:C108G109_RR R 92 ? R 109 ? R 93 ? R 108 ? 1 C G 88 1_555 C C 103 1_555 C C 89 1_555 C G 102 1_555 -1.300 -0.895 2.875 3.038 4.373 37.685 -1.844 2.321 2.649 6.729 -4.675 38.046 50 RR_G93C94:G107C108_RR R 93 ? R 108 ? R 94 ? R 107 ? 1 C C 89 1_555 C G 102 1_555 C C 90 1_555 C G 101 1_555 -0.065 -1.133 3.525 -2.007 17.626 32.671 -4.146 -0.168 2.599 28.838 3.284 37.061 51 RR_C94C95:G106G107_RR R 94 ? R 107 ? R 95 ? R 106 ? 1 C C 90 1_555 C G 101 1_555 C U 91 1_555 C A 100 1_555 -0.475 -1.819 3.648 -1.872 4.320 27.047 -4.981 0.504 3.347 9.149 3.965 27.447 52 RR_C95U96:A105G106_RR R 95 ? R 106 ? R 96 ? R 105 ? 1 C U 91 1_555 C A 100 1_555 C C 92 1_555 C G 99 1_555 0.182 -1.358 3.045 0.838 7.821 40.840 -2.655 -0.177 2.753 11.084 -1.188 41.558 53 RR_U96C97:G104A105_RR R 96 ? R 105 ? R 97 ? R 104 ? 1 C C 92 1_555 C G 99 1_555 C U 93 1_555 C G 98 1_555 -0.005 -1.737 3.480 3.983 3.875 35.367 -3.404 0.602 3.258 6.330 -6.506 35.787 54 RR_C97U98:G103G104_RR R 97 ? R 104 ? R 98 ? R 103 ? 1 C U 93 1_555 C G 98 1_555 C G 94 1_555 C A 96 1_555 1.042 -1.454 3.588 -4.376 7.545 72.253 -1.491 -1.033 3.385 6.376 3.698 72.707 55 RR_U98G99:A101G103_RR R 98 ? R 103 ? R 99 ? R 101 ? #