data_4W92 # _entry.id 4W92 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4W92 pdb_00004w92 10.2210/pdb4w92/pdb WWPDB D_1000203412 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-10-22 2 'Structure model' 1 1 2014-10-29 3 'Structure model' 1 2 2014-12-03 4 'Structure model' 1 3 2017-11-22 5 'Structure model' 1 4 2023-12-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' 5 4 'Structure model' Other 6 4 'Structure model' 'Refinement description' 7 4 'Structure model' 'Source and taxonomy' 8 5 'Structure model' 'Data collection' 9 5 'Structure model' 'Database references' 10 5 'Structure model' 'Derived calculations' 11 5 'Structure model' 'Refinement description' 12 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' citation 2 4 'Structure model' entity_src_gen 3 4 'Structure model' pdbx_database_status 4 4 'Structure model' pdbx_struct_oper_list 5 4 'Structure model' software 6 5 'Structure model' chem_comp 7 5 'Structure model' chem_comp_atom 8 5 'Structure model' chem_comp_bond 9 5 'Structure model' database_2 10 5 'Structure model' entity 11 5 'Structure model' pdbx_entity_nonpoly 12 5 'Structure model' refine_hist # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_citation.journal_id_CSD' 2 4 'Structure model' '_entity_src_gen.pdbx_alt_source_flag' 3 4 'Structure model' '_pdbx_database_status.pdb_format_compatible' 4 4 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 5 5 'Structure model' '_chem_comp.name' 6 5 'Structure model' '_database_2.pdbx_DOI' 7 5 'Structure model' '_database_2.pdbx_database_accession' 8 5 'Structure model' '_entity.pdbx_description' 9 5 'Structure model' '_pdbx_entity_nonpoly.name' 10 5 'Structure model' '_refine_hist.pdbx_number_atoms_nucleic_acid' 11 5 'Structure model' '_refine_hist.pdbx_number_atoms_protein' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 4W92 _pdbx_database_status.recvd_initial_deposition_date 2014-08-26 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Jones, C.P.' 1 ;Ferre-D'Amare, A.R. ; 2 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Embo J.' _citation.journal_id_ASTM EMJODG _citation.journal_id_CSD 0897 _citation.journal_id_ISSN 1460-2075 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 33 _citation.language ? _citation.page_first 2692 _citation.page_last 2703 _citation.title 'Crystal structure of a c-di-AMP riboswitch reveals an internally pseudo-dimeric RNA.' _citation.year 2014 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.15252/embj.201489209 _citation.pdbx_database_id_PubMed 25271255 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Jones, C.P.' 1 ? primary ;Ferre-D'Amare, A.R. ; 2 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'U1 small nuclear ribonucleoprotein A' 10692.992 1 ? 'Y31H, Q36R' 'unp residues 6-96' ? 2 polymer man 'C-di-AMP ribsoswitch' 38299.684 1 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 5 ? ? ? ? 4 non-polymer syn 'POTASSIUM ION' 39.098 1 ? ? ? ? 5 non-polymer syn 1,2-ETHANEDIOL 62.068 1 ? ? ? ? 6 non-polymer syn ;(2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide ; 658.412 2 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name U1A # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no yes ;TRPNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLK(MSE)RGQAFVIFKEVSSATNALRS(MSE)QGFPF YDKP(MSE)RIQYAKTDSDIIAK ; ;TRPNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRIQ YAKTDSDIIAK ; B ? 2 polyribonucleotide no no ;GCGCGCUUAAUCUGAAAUCAGAGCGGGGGACCCAUUGCACUCCGGGUUUUUCCCGUAGGGGUGAAUCCUUUUUAGGUAGG GCGAAAGCCCGAAUCCGUCAGCUAACCUCGUAAGCGCGC ; ;GCGCGCUUAAUCUGAAAUCAGAGCGGGGGACCCAUUGCACUCCGGGUUUUUCCCGUAGGGGUGAAUCCUUUUUAGGUAGG GCGAAAGCCCGAAUCCGUCAGCUAACCUCGUAAGCGCGC ; C ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'MAGNESIUM ION' MG 4 'POTASSIUM ION' K 5 1,2-ETHANEDIOL EDO 6 ;(2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide ; 2BA # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 THR n 1 2 ARG n 1 3 PRO n 1 4 ASN n 1 5 HIS n 1 6 THR n 1 7 ILE n 1 8 TYR n 1 9 ILE n 1 10 ASN n 1 11 ASN n 1 12 LEU n 1 13 ASN n 1 14 GLU n 1 15 LYS n 1 16 ILE n 1 17 LYS n 1 18 LYS n 1 19 ASP n 1 20 GLU n 1 21 LEU n 1 22 LYS n 1 23 LYS n 1 24 SER n 1 25 LEU n 1 26 HIS n 1 27 ALA n 1 28 ILE n 1 29 PHE n 1 30 SER n 1 31 ARG n 1 32 PHE n 1 33 GLY n 1 34 GLN n 1 35 ILE n 1 36 LEU n 1 37 ASP n 1 38 ILE n 1 39 LEU n 1 40 VAL n 1 41 SER n 1 42 ARG n 1 43 SER n 1 44 LEU n 1 45 LYS n 1 46 MSE n 1 47 ARG n 1 48 GLY n 1 49 GLN n 1 50 ALA n 1 51 PHE n 1 52 VAL n 1 53 ILE n 1 54 PHE n 1 55 LYS n 1 56 GLU n 1 57 VAL n 1 58 SER n 1 59 SER n 1 60 ALA n 1 61 THR n 1 62 ASN n 1 63 ALA n 1 64 LEU n 1 65 ARG n 1 66 SER n 1 67 MSE n 1 68 GLN n 1 69 GLY n 1 70 PHE n 1 71 PRO n 1 72 PHE n 1 73 TYR n 1 74 ASP n 1 75 LYS n 1 76 PRO n 1 77 MSE n 1 78 ARG n 1 79 ILE n 1 80 GLN n 1 81 TYR n 1 82 ALA n 1 83 LYS n 1 84 THR n 1 85 ASP n 1 86 SER n 1 87 ASP n 1 88 ILE n 1 89 ILE n 1 90 ALA n 1 91 LYS n 2 1 G n 2 2 C n 2 3 G n 2 4 C n 2 5 G n 2 6 C n 2 7 U n 2 8 U n 2 9 A n 2 10 A n 2 11 U n 2 12 C n 2 13 U n 2 14 G n 2 15 A n 2 16 A n 2 17 A n 2 18 U n 2 19 C n 2 20 A n 2 21 G n 2 22 A n 2 23 G n 2 24 C n 2 25 G n 2 26 G n 2 27 G n 2 28 G n 2 29 G n 2 30 A n 2 31 C n 2 32 C n 2 33 C n 2 34 A n 2 35 U n 2 36 U n 2 37 G n 2 38 C n 2 39 A n 2 40 C n 2 41 U n 2 42 C n 2 43 C n 2 44 G n 2 45 G n 2 46 G n 2 47 U n 2 48 U n 2 49 U n 2 50 U n 2 51 U n 2 52 C n 2 53 C n 2 54 C n 2 55 G n 2 56 U n 2 57 A n 2 58 G n 2 59 G n 2 60 G n 2 61 G n 2 62 U n 2 63 G n 2 64 A n 2 65 A n 2 66 U n 2 67 C n 2 68 C n 2 69 U n 2 70 U n 2 71 U n 2 72 U n 2 73 U n 2 74 A n 2 75 G n 2 76 G n 2 77 U n 2 78 A n 2 79 G n 2 80 G n 2 81 G n 2 82 C n 2 83 G n 2 84 A n 2 85 A n 2 86 A n 2 87 G n 2 88 C n 2 89 C n 2 90 C n 2 91 G n 2 92 A n 2 93 A n 2 94 U n 2 95 C n 2 96 C n 2 97 G n 2 98 U n 2 99 C n 2 100 A n 2 101 G n 2 102 C n 2 103 U n 2 104 A n 2 105 A n 2 106 C n 2 107 C n 2 108 U n 2 109 C n 2 110 G n 2 111 U n 2 112 A n 2 113 A n 2 114 G n 2 115 C n 2 116 G n 2 117 C n 2 118 G n 2 119 C n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 91 Human ? SNRPA ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? plasmid ? ? ? pIDTBlue ? ? 2 1 sample 'Biological sequence' 1 119 ? ? ? ? ? ? ? ? ? 'Bacillus subtilis' 1423 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? 'B834(DE3)' ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 2BA non-polymer . ;(2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide ; "bis-(3',5')-cyclic-dimeric-Adenosine-monophosphate" 'C20 H24 N10 O12 P2' 658.412 A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 THR 1 6 6 THR THR B . n A 1 2 ARG 2 7 7 ARG ARG B . n A 1 3 PRO 3 8 8 PRO PRO B . n A 1 4 ASN 4 9 9 ASN ASN B . n A 1 5 HIS 5 10 10 HIS HIS B . n A 1 6 THR 6 11 11 THR THR B . n A 1 7 ILE 7 12 12 ILE ILE B . n A 1 8 TYR 8 13 13 TYR TYR B . n A 1 9 ILE 9 14 14 ILE ILE B . n A 1 10 ASN 10 15 15 ASN ASN B . n A 1 11 ASN 11 16 16 ASN ASN B . n A 1 12 LEU 12 17 17 LEU LEU B . n A 1 13 ASN 13 18 18 ASN ASN B . n A 1 14 GLU 14 19 19 GLU GLU B . n A 1 15 LYS 15 20 20 LYS LYS B . n A 1 16 ILE 16 21 21 ILE ILE B . n A 1 17 LYS 17 22 22 LYS LYS B . n A 1 18 LYS 18 23 23 LYS LYS B . n A 1 19 ASP 19 24 24 ASP ASP B . n A 1 20 GLU 20 25 25 GLU GLU B . n A 1 21 LEU 21 26 26 LEU LEU B . n A 1 22 LYS 22 27 27 LYS LYS B . n A 1 23 LYS 23 28 28 LYS LYS B . n A 1 24 SER 24 29 29 SER SER B . n A 1 25 LEU 25 30 30 LEU LEU B . n A 1 26 HIS 26 31 31 HIS HIS B . n A 1 27 ALA 27 32 32 ALA ALA B . n A 1 28 ILE 28 33 33 ILE ILE B . n A 1 29 PHE 29 34 34 PHE PHE B . n A 1 30 SER 30 35 35 SER SER B . n A 1 31 ARG 31 36 36 ARG ARG B . n A 1 32 PHE 32 37 37 PHE PHE B . n A 1 33 GLY 33 38 38 GLY GLY B . n A 1 34 GLN 34 39 39 GLN GLN B . n A 1 35 ILE 35 40 40 ILE ILE B . n A 1 36 LEU 36 41 41 LEU LEU B . n A 1 37 ASP 37 42 42 ASP ASP B . n A 1 38 ILE 38 43 43 ILE ILE B . n A 1 39 LEU 39 44 44 LEU LEU B . n A 1 40 VAL 40 45 45 VAL VAL B . n A 1 41 SER 41 46 46 SER SER B . n A 1 42 ARG 42 47 47 ARG ARG B . n A 1 43 SER 43 48 48 SER SER B . n A 1 44 LEU 44 49 49 LEU LEU B . n A 1 45 LYS 45 50 50 LYS LYS B . n A 1 46 MSE 46 51 51 MSE MSE B . n A 1 47 ARG 47 52 52 ARG ARG B . n A 1 48 GLY 48 53 53 GLY GLY B . n A 1 49 GLN 49 54 54 GLN GLN B . n A 1 50 ALA 50 55 55 ALA ALA B . n A 1 51 PHE 51 56 56 PHE PHE B . n A 1 52 VAL 52 57 57 VAL VAL B . n A 1 53 ILE 53 58 58 ILE ILE B . n A 1 54 PHE 54 59 59 PHE PHE B . n A 1 55 LYS 55 60 60 LYS LYS B . n A 1 56 GLU 56 61 61 GLU GLU B . n A 1 57 VAL 57 62 62 VAL VAL B . n A 1 58 SER 58 63 63 SER SER B . n A 1 59 SER 59 64 64 SER SER B . n A 1 60 ALA 60 65 65 ALA ALA B . n A 1 61 THR 61 66 66 THR THR B . n A 1 62 ASN 62 67 67 ASN ASN B . n A 1 63 ALA 63 68 68 ALA ALA B . n A 1 64 LEU 64 69 69 LEU LEU B . n A 1 65 ARG 65 70 70 ARG ARG B . n A 1 66 SER 66 71 71 SER SER B . n A 1 67 MSE 67 72 72 MSE MSE B . n A 1 68 GLN 68 73 73 GLN GLN B . n A 1 69 GLY 69 74 74 GLY GLY B . n A 1 70 PHE 70 75 75 PHE PHE B . n A 1 71 PRO 71 76 76 PRO PRO B . n A 1 72 PHE 72 77 77 PHE PHE B . n A 1 73 TYR 73 78 78 TYR TYR B . n A 1 74 ASP 74 79 79 ASP ASP B . n A 1 75 LYS 75 80 80 LYS LYS B . n A 1 76 PRO 76 81 81 PRO PRO B . n A 1 77 MSE 77 82 82 MSE MSE B . n A 1 78 ARG 78 83 83 ARG ARG B . n A 1 79 ILE 79 84 84 ILE ILE B . n A 1 80 GLN 80 85 85 GLN GLN B . n A 1 81 TYR 81 86 86 TYR TYR B . n A 1 82 ALA 82 87 87 ALA ALA B . n A 1 83 LYS 83 88 ? ? ? B . n A 1 84 THR 84 89 89 THR THR B . n A 1 85 ASP 85 90 90 ASP ASP B . n A 1 86 SER 86 91 91 SER SER B . n A 1 87 ASP 87 92 92 ASP ASP B . n A 1 88 ILE 88 93 93 ILE ILE B . n A 1 89 ILE 89 94 94 ILE ILE B . n A 1 90 ALA 90 95 95 ALA ALA B . n A 1 91 LYS 91 96 96 LYS LYS B . n B 2 1 G 1 1 1 G G C . n B 2 2 C 2 2 2 C C C . n B 2 3 G 3 3 3 G G C . n B 2 4 C 4 4 4 C C C . n B 2 5 G 5 5 5 G G C . n B 2 6 C 6 6 6 C C C . n B 2 7 U 7 7 7 U U C . n B 2 8 U 8 8 8 U U C . n B 2 9 A 9 9 9 A A C . n B 2 10 A 10 10 10 A A C . n B 2 11 U 11 11 11 U U C . n B 2 12 C 12 12 12 C C C . n B 2 13 U 13 13 13 U U C . n B 2 14 G 14 14 14 G G C . n B 2 15 A 15 15 ? ? ? C . n B 2 16 A 16 16 ? ? ? C . n B 2 17 A 17 17 ? ? ? C . n B 2 18 U 18 18 ? ? ? C . n B 2 19 C 19 19 19 C C C . n B 2 20 A 20 20 20 A A C . n B 2 21 G 21 21 21 G G C . n B 2 22 A 22 22 22 A A C . n B 2 23 G 23 23 23 G G C . n B 2 24 C 24 24 24 C C C . n B 2 25 G 25 25 25 G G C . n B 2 26 G 26 26 26 G G C . n B 2 27 G 27 27 27 G G C . n B 2 28 G 28 28 28 G G C . n B 2 29 G 29 29 29 G G C . n B 2 30 A 30 30 30 A A C . n B 2 31 C 31 31 31 C C C . n B 2 32 C 32 32 32 C C C . n B 2 33 C 33 33 33 C C C . n B 2 34 A 34 34 34 A A C . n B 2 35 U 35 35 35 U U C . n B 2 36 U 36 36 36 U U C . n B 2 37 G 37 37 37 G G C . n B 2 38 C 38 38 38 C C C . n B 2 39 A 39 39 39 A A C . n B 2 40 C 40 40 40 C C C . n B 2 41 U 41 41 41 U U C . n B 2 42 C 42 42 42 C C C . n B 2 43 C 43 43 ? ? ? C . n B 2 44 G 44 44 ? ? ? C . n B 2 45 G 45 45 ? ? ? C . n B 2 46 G 46 46 ? ? ? C . n B 2 47 U 47 47 ? ? ? C . n B 2 48 U 48 48 ? ? ? C . n B 2 49 U 49 49 ? ? ? C . n B 2 50 U 50 50 ? ? ? C . n B 2 51 U 51 51 ? ? ? C . n B 2 52 C 52 52 ? ? ? C . n B 2 53 C 53 53 ? ? ? C . n B 2 54 C 54 54 ? ? ? C . n B 2 55 G 55 55 ? ? ? C . n B 2 56 U 56 56 ? ? ? C . n B 2 57 A 57 57 57 A A C . n B 2 58 G 58 58 58 G G C . n B 2 59 G 59 59 59 G G C . n B 2 60 G 60 60 60 G G C . n B 2 61 G 61 61 61 G G C . n B 2 62 U 62 62 62 U U C . n B 2 63 G 63 63 63 G G C . n B 2 64 A 64 64 64 A A C . n B 2 65 A 65 65 65 A A C . n B 2 66 U 66 66 66 U U C . n B 2 67 C 67 67 67 C C C . n B 2 68 C 68 68 68 C C C . n B 2 69 U 69 69 69 U U C . n B 2 70 U 70 70 ? ? ? C . n B 2 71 U 71 71 ? ? ? C . n B 2 72 U 72 72 ? ? ? C . n B 2 73 U 73 73 ? ? ? C . n B 2 74 A 74 74 ? ? ? C . n B 2 75 G 75 75 75 G G C . n B 2 76 G 76 76 76 G G C . n B 2 77 U 77 77 77 U U C . n B 2 78 A 78 78 78 A A C . n B 2 79 G 79 79 79 G G C . n B 2 80 G 80 80 80 G G C . n B 2 81 G 81 81 81 G G C . n B 2 82 C 82 82 82 C C C . n B 2 83 G 83 83 83 G G C . n B 2 84 A 84 84 84 A A C . n B 2 85 A 85 85 85 A A C . n B 2 86 A 86 86 86 A A C . n B 2 87 G 87 87 87 G G C . n B 2 88 C 88 88 88 C C C . n B 2 89 C 89 89 89 C C C . n B 2 90 C 90 90 90 C C C . n B 2 91 G 91 91 91 G G C . n B 2 92 A 92 92 92 A A C . n B 2 93 A 93 93 93 A A C . n B 2 94 U 94 94 94 U U C . n B 2 95 C 95 95 95 C C C . n B 2 96 C 96 96 96 C C C . n B 2 97 G 97 97 97 G G C . n B 2 98 U 98 98 98 U U C . n B 2 99 C 99 99 99 C C C . n B 2 100 A 100 100 100 A A C . n B 2 101 G 101 101 101 G G C . n B 2 102 C 102 102 102 C C C . n B 2 103 U 103 103 103 U U C . n B 2 104 A 104 104 104 A A C . n B 2 105 A 105 105 105 A A C . n B 2 106 C 106 106 106 C C C . n B 2 107 C 107 107 107 C C C . n B 2 108 U 108 108 108 U U C . n B 2 109 C 109 109 109 C C C . n B 2 110 G 110 110 110 G G C . n B 2 111 U 111 111 111 U U C . n B 2 112 A 112 112 112 A A C . n B 2 113 A 113 113 113 A A C . n B 2 114 G 114 114 114 G G C . n B 2 115 C 115 115 115 C C C . n B 2 116 G 116 116 116 G G C . n B 2 117 C 117 117 117 C C C . n B 2 118 G 118 118 118 G G C . n B 2 119 C 119 119 119 C C C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MG 1 201 1 MG MG C . D 3 MG 1 202 4 MG MG C . E 3 MG 1 203 5 MG MG C . F 3 MG 1 204 6 MG MG C . G 3 MG 1 205 7 MG MG C . H 4 K 1 206 2 K K C . I 5 EDO 1 207 1 EDO EDO C . J 6 2BA 1 208 1 2BA 2BA C . K 6 2BA 1 209 2 2BA 2BA C . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 B ARG 7 ? CG ? A ARG 2 CG 2 1 Y 1 B ARG 7 ? CD ? A ARG 2 CD 3 1 Y 1 B ARG 7 ? NE ? A ARG 2 NE 4 1 Y 1 B ARG 7 ? CZ ? A ARG 2 CZ 5 1 Y 1 B ARG 7 ? NH1 ? A ARG 2 NH1 6 1 Y 1 B ARG 7 ? NH2 ? A ARG 2 NH2 7 1 Y 1 B LYS 20 ? CD ? A LYS 15 CD 8 1 Y 1 B LYS 20 ? CE ? A LYS 15 CE 9 1 Y 1 B LYS 20 ? NZ ? A LYS 15 NZ 10 1 Y 1 B LYS 23 ? NZ ? A LYS 18 NZ 11 1 Y 1 B ASP 24 ? CG ? A ASP 19 CG 12 1 Y 1 B ASP 24 ? OD1 ? A ASP 19 OD1 13 1 Y 1 B ASP 24 ? OD2 ? A ASP 19 OD2 14 1 Y 1 B LYS 28 ? CG ? A LYS 23 CG 15 1 Y 1 B LYS 28 ? CD ? A LYS 23 CD 16 1 Y 1 B LYS 28 ? CE ? A LYS 23 CE 17 1 Y 1 B LYS 28 ? NZ ? A LYS 23 NZ 18 1 Y 1 B GLN 39 ? CG ? A GLN 34 CG 19 1 Y 1 B GLN 39 ? CD ? A GLN 34 CD 20 1 Y 1 B GLN 39 ? OE1 ? A GLN 34 OE1 21 1 Y 1 B GLN 39 ? NE2 ? A GLN 34 NE2 22 1 Y 1 B LEU 41 ? CG ? A LEU 36 CG 23 1 Y 1 B LEU 41 ? CD1 ? A LEU 36 CD1 24 1 Y 1 B LEU 41 ? CD2 ? A LEU 36 CD2 25 1 Y 1 B LEU 49 ? CG ? A LEU 44 CG 26 1 Y 1 B LEU 49 ? CD1 ? A LEU 44 CD1 27 1 Y 1 B LEU 49 ? CD2 ? A LEU 44 CD2 28 1 Y 1 B LYS 50 ? CG ? A LYS 45 CG 29 1 Y 1 B LYS 50 ? CD ? A LYS 45 CD 30 1 Y 1 B LYS 50 ? CE ? A LYS 45 CE 31 1 Y 1 B LYS 50 ? NZ ? A LYS 45 NZ 32 1 Y 1 B MSE 51 ? CE ? A MSE 46 CE 33 1 Y 1 B ARG 52 ? NE ? A ARG 47 NE 34 1 Y 1 B ARG 52 ? CZ ? A ARG 47 CZ 35 1 Y 1 B ARG 52 ? NH1 ? A ARG 47 NH1 36 1 Y 1 B ARG 52 ? NH2 ? A ARG 47 NH2 37 1 Y 1 B LYS 60 ? CG ? A LYS 55 CG 38 1 Y 1 B LYS 60 ? CD ? A LYS 55 CD 39 1 Y 1 B LYS 60 ? CE ? A LYS 55 CE 40 1 Y 1 B LYS 60 ? NZ ? A LYS 55 NZ 41 1 Y 1 B GLU 61 ? CG ? A GLU 56 CG 42 1 Y 1 B GLU 61 ? CD ? A GLU 56 CD 43 1 Y 1 B GLU 61 ? OE1 ? A GLU 56 OE1 44 1 Y 1 B GLU 61 ? OE2 ? A GLU 56 OE2 45 1 Y 1 B ARG 70 ? CG ? A ARG 65 CG 46 1 Y 1 B ARG 70 ? CD ? A ARG 65 CD 47 1 Y 1 B ARG 70 ? NE ? A ARG 65 NE 48 1 Y 1 B ARG 70 ? CZ ? A ARG 65 CZ 49 1 Y 1 B ARG 70 ? NH1 ? A ARG 65 NH1 50 1 Y 1 B ARG 70 ? NH2 ? A ARG 65 NH2 51 1 Y 1 B LYS 80 ? CG ? A LYS 75 CG 52 1 Y 1 B LYS 80 ? CD ? A LYS 75 CD 53 1 Y 1 B LYS 80 ? CE ? A LYS 75 CE 54 1 Y 1 B LYS 80 ? NZ ? A LYS 75 NZ 55 1 Y 1 B ARG 83 ? CZ ? A ARG 78 CZ 56 1 Y 1 B ARG 83 ? NH1 ? A ARG 78 NH1 57 1 Y 1 B ARG 83 ? NH2 ? A ARG 78 NH2 58 1 Y 1 B GLN 85 ? CG ? A GLN 80 CG 59 1 Y 1 B GLN 85 ? CD ? A GLN 80 CD 60 1 Y 1 B GLN 85 ? OE1 ? A GLN 80 OE1 61 1 Y 1 B GLN 85 ? NE2 ? A GLN 80 NE2 62 1 Y 1 B ASP 90 ? CG ? A ASP 85 CG 63 1 Y 1 B ASP 90 ? OD1 ? A ASP 85 OD1 64 1 Y 1 B ASP 90 ? OD2 ? A ASP 85 OD2 65 1 Y 1 B ILE 93 ? CG1 ? A ILE 88 CG1 66 1 Y 1 B ILE 93 ? CG2 ? A ILE 88 CG2 67 1 Y 1 B ILE 93 ? CD1 ? A ILE 88 CD1 68 1 Y 1 B ILE 94 ? CG1 ? A ILE 89 CG1 69 1 Y 1 B ILE 94 ? CG2 ? A ILE 89 CG2 70 1 Y 1 B ILE 94 ? CD1 ? A ILE 89 CD1 71 1 Y 1 B LYS 96 ? CG ? A LYS 91 CG 72 1 Y 1 B LYS 96 ? CD ? A LYS 91 CD 73 1 Y 1 B LYS 96 ? CE ? A LYS 91 CE 74 1 Y 1 B LYS 96 ? NZ ? A LYS 91 NZ 75 1 Y 1 C C 42 ? "O5'" ? B C 42 "O5'" 76 1 Y 1 C C 42 ? "C5'" ? B C 42 "C5'" 77 1 Y 1 C C 42 ? "C4'" ? B C 42 "C4'" 78 1 Y 1 C C 42 ? "O4'" ? B C 42 "O4'" 79 1 Y 1 C C 42 ? "C3'" ? B C 42 "C3'" 80 1 Y 1 C C 42 ? "O3'" ? B C 42 "O3'" 81 1 Y 1 C C 42 ? "C2'" ? B C 42 "C2'" 82 1 Y 1 C C 42 ? "O2'" ? B C 42 "O2'" 83 1 Y 1 C C 42 ? "C1'" ? B C 42 "C1'" 84 1 Y 1 C C 42 ? N1 ? B C 42 N1 85 1 Y 1 C C 42 ? C2 ? B C 42 C2 86 1 Y 1 C C 42 ? O2 ? B C 42 O2 87 1 Y 1 C C 42 ? N3 ? B C 42 N3 88 1 Y 1 C C 42 ? C4 ? B C 42 C4 89 1 Y 1 C C 42 ? N4 ? B C 42 N4 90 1 Y 1 C C 42 ? C5 ? B C 42 C5 91 1 Y 1 C C 42 ? C6 ? B C 42 C6 92 1 Y 1 C A 57 ? OP1 ? B A 57 OP1 93 1 Y 1 C A 57 ? OP2 ? B A 57 OP2 # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(phenix.refine: 1.9_1692)' 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALEPACK ? ? ? . 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.15 3 # _cell.length_a 60.281 _cell.length_b 83.062 _cell.length_c 233.573 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 4W92 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.space_group_name_H-M 'I 2 2 2' _symmetry.entry_id 4W92 _symmetry.Int_Tables_number 23 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 4W92 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.98 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 58.78 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 5.2 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'PEG 3350' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2014-02-07 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Double crystal, Si(111) liquid N2 cooled' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.979 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ALS BEAMLINE 5.0.2' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.979 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 5.0.2 _diffrn_source.pdbx_synchrotron_site ALS # _reflns.entry_id 4W92 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.d_resolution_high 3.200 _reflns.d_resolution_low 50.000 _reflns.pdbx_number_measured_all 122045 _reflns.number_obs 9964 _reflns.pdbx_Rmerge_I_obs 0.166 _reflns.pdbx_netI_over_av_sigmaI 18.267 _reflns.pdbx_netI_over_sigmaI 5.100 _reflns.pdbx_chi_squared 1.611 _reflns.pdbx_redundancy 12.200 _reflns.percent_possible_obs 99.200 _reflns.B_iso_Wilson_estimate 86.470 _reflns.pdbx_Rrim_I_all 0.165 _reflns.pdbx_Rpim_I_all 0.056 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? # loop_ _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.pdbx_rejects _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.meanI_over_sigI_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_CC_half 1 1 3.200 3.260 ? ? ? 0 ? ? ? 1.088 6.800 ? ? ? 438 ? ? ? ? 91.100 ? 0.491 0.513 1 2 3.260 3.310 ? ? ? 0 ? ? ? 1.106 8.900 ? ? ? 477 ? ? ? ? 95.200 ? 0.426 0.585 1 3 3.310 3.380 ? ? ? 0 ? ? ? 1.135 9.600 ? ? ? 469 ? ? ? ? 98.900 ? 0.443 0.569 1 4 3.380 3.450 ? ? ? 0 ? ? ? 1.211 10.100 ? ? ? 506 ? ? ? ? 99.800 ? 0.410 0.590 1 5 3.450 3.520 ? ? ? 0 0.962 ? ? 1.279 11.600 ? ? ? 482 ? ? ? ? 99.800 ? 0.291 0.852 1 6 3.520 3.600 ? ? ? 0 0.931 ? ? 1.202 11.800 ? ? ? 499 ? ? ? ? 100.000 0.973 0.280 0.840 1 7 3.600 3.690 ? ? ? 0 0.845 ? ? 1.322 12.300 ? ? ? 481 ? ? ? ? 100.000 0.882 0.250 0.878 1 8 3.690 3.790 ? ? ? 0 0.729 ? ? 1.255 12.800 ? ? ? 505 ? ? ? ? 100.000 0.760 0.211 0.927 1 9 3.790 3.910 ? ? ? 0 0.628 ? ? 1.233 13.000 ? ? ? 482 ? ? ? ? 100.000 0.653 0.180 0.950 1 10 3.910 4.030 ? ? ? 0 0.552 ? ? 1.299 13.400 ? ? ? 511 ? ? ? ? 100.000 0.574 0.156 0.959 1 11 4.030 4.180 ? ? ? 0 0.469 ? ? 1.233 13.500 ? ? ? 488 ? ? ? ? 100.000 0.488 0.132 0.971 1 12 4.180 4.340 ? ? ? 0 0.373 ? ? 1.363 13.700 ? ? ? 501 ? ? ? ? 100.000 0.388 0.105 0.986 1 13 4.340 4.540 ? ? ? 0 0.330 ? ? 1.399 13.900 ? ? ? 506 ? ? ? ? 100.000 0.343 0.092 0.984 1 14 4.540 4.780 ? ? ? 0 0.239 ? ? 1.538 13.600 ? ? ? 493 ? ? ? ? 100.000 0.248 0.067 0.987 1 15 4.780 5.080 ? ? ? 0 0.213 ? ? 1.538 13.800 ? ? ? 508 ? ? ? ? 100.000 0.222 0.061 0.999 1 16 5.080 5.470 ? ? ? 0 0.163 ? ? 1.698 13.500 ? ? ? 504 ? ? ? ? 100.000 0.170 0.046 0.994 1 17 5.470 6.020 ? ? ? 0 0.139 ? ? 1.766 13.100 ? ? ? 518 ? ? ? ? 100.000 0.145 0.040 0.997 1 18 6.020 6.890 ? ? ? 0 0.120 ? ? 2.058 12.700 ? ? ? 511 ? ? ? ? 99.400 0.125 0.035 0.996 1 19 6.890 8.670 ? ? ? 0 0.095 ? ? 2.556 13.600 ? ? ? 524 ? ? ? ? 100.000 0.099 0.027 0.995 1 20 8.670 50.000 ? ? ? 0 0.059 ? ? 3.915 12.200 ? ? ? 561 ? ? ? ? 99.300 0.062 0.018 1.000 # _refine.entry_id 4W92 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_d_res_high 3.2090 _refine.ls_d_res_low 48.7870 _refine.pdbx_ls_sigma_F 1.330 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 98.1800 _refine.ls_number_reflns_obs 8069 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.ls_matrix_type ? _refine.pdbx_R_Free_selection_details 'Random selection' _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2553 _refine.ls_R_factor_R_work 0.2517 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2892 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 9.9300 _refine.ls_number_reflns_R_free 1807 _refine.ls_number_reflns_R_work 16383 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 100.4238 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.4300 _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_stereochemistry_target_values MLHL _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 211.660 _refine.B_iso_min 31.580 _refine.pdbx_overall_phase_error 31.0100 _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_R_factor_R_free_error_details ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 3.2090 _refine_hist.d_res_low 48.7870 _refine_hist.pdbx_number_atoms_ligand 98 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 2789 _refine_hist.pdbx_number_residues_total 186 _refine_hist.pdbx_B_iso_mean_ligand 54.75 _refine_hist.pdbx_number_atoms_protein 658 _refine_hist.pdbx_number_atoms_nucleic_acid 2033 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' f_bond_d 3044 0.003 ? ? ? 'X-RAY DIFFRACTION' f_angle_d 4599 0.728 ? ? ? 'X-RAY DIFFRACTION' f_chiral_restr 596 0.027 ? ? ? 'X-RAY DIFFRACTION' f_plane_restr 215 0.002 ? ? ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 1399 14.753 ? ? ? # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.pdbx_refine_id _refine_ls_shell.R_factor_obs 3.2094 3.2962 13 81.0000 1008 . 0.3684 0.4204 . 110 . 1118 . 'X-RAY DIFFRACTION' . 3.2962 3.3931 13 97.0000 1278 . 0.3357 0.3710 . 143 . 1421 . 'X-RAY DIFFRACTION' . 3.3931 3.5026 13 99.0000 1269 . 0.3149 0.3681 . 144 . 1413 . 'X-RAY DIFFRACTION' . 3.5026 3.6278 13 100.0000 1253 . 0.2982 0.3305 . 139 . 1392 . 'X-RAY DIFFRACTION' . 3.6278 3.7730 13 100.0000 1321 . 0.2824 0.3061 . 145 . 1466 . 'X-RAY DIFFRACTION' . 3.7730 3.9446 13 100.0000 1282 . 0.2525 0.3328 . 140 . 1422 . 'X-RAY DIFFRACTION' . 3.9446 4.1525 13 100.0000 1279 . 0.2368 0.2524 . 139 . 1418 . 'X-RAY DIFFRACTION' . 4.1525 4.4125 13 100.0000 1274 . 0.2359 0.2727 . 142 . 1416 . 'X-RAY DIFFRACTION' . 4.4125 4.7529 13 100.0000 1275 . 0.2229 0.2480 . 139 . 1414 . 'X-RAY DIFFRACTION' . 4.7529 5.2307 13 100.0000 1296 . 0.2089 0.2756 . 139 . 1435 . 'X-RAY DIFFRACTION' . 5.2307 5.9865 13 100.0000 1288 . 0.2146 0.2421 . 149 . 1437 . 'X-RAY DIFFRACTION' . 5.9865 7.5378 13 100.0000 1279 . 0.2450 0.2579 . 146 . 1425 . 'X-RAY DIFFRACTION' . 7.5378 48.7927 13 99.0000 1281 . 0.2494 0.2955 . 132 . 1413 . 'X-RAY DIFFRACTION' . # _struct.entry_id 4W92 _struct.title 'Crystal structure of Bacillus subtilis cyclic-di-AMP riboswitch ydaO' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 4W92 _struct_keywords.text 'riboswitch, cyclic-di-AMP, protein-RNA complex, rna binding protein-rna complex' _struct_keywords.pdbx_keywords 'rna binding protein/rna' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 4 ? I N N 5 ? J N N 6 ? K N N 6 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP SNRPA_HUMAN P09012 ? 1 ;TRPNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRIQ YAKTDSDIIAK ; 6 2 PDB 4W92 4W92 ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4W92 B 1 ? 91 ? P09012 6 ? 96 ? 6 96 2 2 4W92 C 1 ? 119 ? 4W92 1 ? 119 ? 1 119 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4W92 HIS B 26 ? UNP P09012 TYR 31 'engineered mutation' 31 1 1 4W92 ARG B 31 ? UNP P09012 GLN 36 'engineered mutation' 36 2 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2410 ? 1 MORE -58 ? 1 'SSA (A^2)' 21730 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 LYS A 17 ? SER A 30 ? LYS B 22 SER B 35 1 ? 14 HELX_P HELX_P2 AA2 ARG A 31 ? GLY A 33 ? ARG B 36 GLY B 38 5 ? 3 HELX_P HELX_P3 AA3 GLU A 56 ? GLN A 68 ? GLU B 61 GLN B 73 1 ? 13 HELX_P HELX_P4 AA4 SER A 86 ? LYS A 91 ? SER B 91 LYS B 96 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A LYS 45 C ? ? ? 1_555 A MSE 46 N ? ? B LYS 50 B MSE 51 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale2 covale both ? A MSE 46 C ? ? ? 1_555 A ARG 47 N ? ? B MSE 51 B ARG 52 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale3 covale both ? A SER 66 C ? ? ? 1_555 A MSE 67 N ? ? B SER 71 B MSE 72 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale4 covale both ? A MSE 67 C ? ? ? 1_555 A GLN 68 N ? ? B MSE 72 B GLN 73 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale5 covale both ? A PRO 76 C ? ? ? 1_555 A MSE 77 N ? ? B PRO 81 B MSE 82 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale6 covale both ? A MSE 77 C ? ? ? 1_555 A ARG 78 N ? ? B MSE 82 B ARG 83 1_555 ? ? ? ? ? ? ? 1.325 ? ? metalc1 metalc ? ? B U 7 OP1 ? ? ? 1_555 F MG . MG ? ? C U 7 C MG 204 1_555 ? ? ? ? ? ? ? 2.022 ? ? metalc2 metalc ? ? B G 27 OP1 ? ? ? 1_555 C MG . MG ? ? C G 27 C MG 201 1_555 ? ? ? ? ? ? ? 2.326 ? ? metalc3 metalc ? ? B G 29 OP2 ? ? ? 1_555 D MG . MG ? ? C G 29 C MG 202 1_555 ? ? ? ? ? ? ? 2.493 ? ? metalc4 metalc ? ? B U 62 OP1 ? ? ? 1_555 C MG . MG ? ? C U 62 C MG 201 1_555 ? ? ? ? ? ? ? 2.118 ? ? metalc5 metalc ? ? B C 82 OP1 ? ? ? 1_555 F MG . MG ? ? C C 82 C MG 204 1_555 ? ? ? ? ? ? ? 2.407 ? ? metalc6 metalc ? ? B G 101 OP1 ? ? ? 1_555 D MG . MG ? ? C G 101 C MG 202 1_555 ? ? ? ? ? ? ? 2.164 ? ? metalc7 metalc ? ? B G 101 OP2 ? ? ? 1_555 G MG . MG ? ? C G 101 C MG 205 1_555 ? ? ? ? ? ? ? 2.541 ? ? metalc8 metalc ? ? B C 102 OP2 ? ? ? 1_555 D MG . MG ? ? C C 102 C MG 202 1_555 ? ? ? ? ? ? ? 2.026 ? ? metalc9 metalc ? ? B U 103 O4 ? ? ? 1_555 D MG . MG ? ? C U 103 C MG 202 1_555 ? ? ? ? ? ? ? 2.101 ? ? hydrog1 hydrog ? ? B G 1 N1 ? ? ? 1_555 B C 119 N3 ? ? C G 1 C C 119 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog2 hydrog ? ? B C 2 N3 ? ? ? 1_555 B G 118 N1 ? ? C C 2 C G 118 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B C 2 N4 ? ? ? 1_555 B G 118 O6 ? ? C C 2 C G 118 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B C 2 O2 ? ? ? 1_555 B G 118 N2 ? ? C C 2 C G 118 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B G 3 N1 ? ? ? 1_555 B C 117 N3 ? ? C G 3 C C 117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B G 3 N2 ? ? ? 1_555 B C 117 O2 ? ? C G 3 C C 117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B G 3 O6 ? ? ? 1_555 B C 117 N4 ? ? C G 3 C C 117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B C 4 N3 ? ? ? 1_555 B G 116 N1 ? ? C C 4 C G 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B C 4 N4 ? ? ? 1_555 B G 116 O6 ? ? C C 4 C G 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B C 4 O2 ? ? ? 1_555 B G 116 N2 ? ? C C 4 C G 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B G 5 N1 ? ? ? 1_555 B C 115 N3 ? ? C G 5 C C 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B G 5 N2 ? ? ? 1_555 B C 115 O2 ? ? C G 5 C C 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B G 5 O6 ? ? ? 1_555 B C 115 N4 ? ? C G 5 C C 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B C 6 N3 ? ? ? 1_555 B G 114 N1 ? ? C C 6 C G 114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B C 6 N4 ? ? ? 1_555 B G 114 O6 ? ? C C 6 C G 114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B C 6 O2 ? ? ? 1_555 B G 114 N2 ? ? C C 6 C G 114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B U 7 N3 ? ? ? 1_555 B A 113 N1 ? ? C U 7 C A 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B U 7 O4 ? ? ? 1_555 B A 113 N6 ? ? C U 7 C A 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B A 9 N3 ? ? ? 1_555 B G 110 N2 ? ? C A 9 C G 110 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog20 hydrog ? ? B U 11 N3 ? ? ? 1_555 B A 22 N1 ? ? C U 11 C A 22 1_555 ? ? ? ? ? ? 'U-A PAIR' ? ? ? hydrog21 hydrog ? ? B C 12 N4 ? ? ? 1_555 B G 21 O6 ? ? C C 12 C G 21 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog22 hydrog ? ? B U 13 N3 ? ? ? 1_555 B A 20 N1 ? ? C U 13 C A 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B U 13 O4 ? ? ? 1_555 B A 20 N6 ? ? C U 13 C A 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B G 14 N1 ? ? ? 1_555 B C 19 N3 ? ? C G 14 C C 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B G 14 N2 ? ? ? 1_555 B C 19 O2 ? ? C G 14 C C 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B G 14 O6 ? ? ? 1_555 B C 19 N4 ? ? C G 14 C C 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B G 23 N1 ? ? ? 1_555 B U 111 O2 ? ? C G 23 C U 111 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog28 hydrog ? ? B G 23 O6 ? ? ? 1_555 B U 111 N3 ? ? C G 23 C U 111 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog29 hydrog ? ? B C 24 N3 ? ? ? 1_555 B G 110 N1 ? ? C C 24 C G 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B C 24 N4 ? ? ? 1_555 B G 110 O6 ? ? C C 24 C G 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? B C 24 O2 ? ? ? 1_555 B G 110 N2 ? ? C C 24 C G 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? B G 25 N1 ? ? ? 1_555 B C 109 N3 ? ? C G 25 C C 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? B G 25 N2 ? ? ? 1_555 B C 109 O2 ? ? C G 25 C C 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? B G 25 O6 ? ? ? 1_555 B C 109 N4 ? ? C G 25 C C 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? B G 26 N1 ? ? ? 1_555 B U 108 O2 ? ? C G 26 C U 108 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog36 hydrog ? ? B G 26 O6 ? ? ? 1_555 B U 108 N3 ? ? C G 26 C U 108 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog37 hydrog ? ? B G 27 N1 ? ? ? 1_555 B C 107 N3 ? ? C G 27 C C 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? B G 27 N2 ? ? ? 1_555 B C 107 O2 ? ? C G 27 C C 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? B G 27 O6 ? ? ? 1_555 B C 107 N4 ? ? C G 27 C C 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? B G 28 N1 ? ? ? 1_555 B C 106 N3 ? ? C G 28 C C 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? B G 28 N2 ? ? ? 1_555 B C 106 O2 ? ? C G 28 C C 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? B G 28 O6 ? ? ? 1_555 B C 106 N4 ? ? C G 28 C C 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? B G 29 N2 ? ? ? 1_555 B A 105 N7 ? ? C G 29 C A 105 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog44 hydrog ? ? B G 29 N3 ? ? ? 1_555 B A 105 N6 ? ? C G 29 C A 105 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog45 hydrog ? ? B C 32 N4 ? ? ? 1_555 B C 102 O2 ? ? C C 32 C C 102 1_555 ? ? ? ? ? ? 'C-C MISPAIR' ? ? ? hydrog46 hydrog ? ? B C 33 N3 ? ? ? 1_555 B G 101 N1 ? ? C C 33 C G 101 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? B C 33 N4 ? ? ? 1_555 B G 101 O6 ? ? C C 33 C G 101 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? B C 33 O2 ? ? ? 1_555 B G 101 N2 ? ? C C 33 C G 101 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? B A 57 N6 ? ? ? 1_555 B U 98 O2 ? ? C A 57 C U 98 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog50 hydrog ? ? B A 57 N7 ? ? ? 1_555 B U 98 N3 ? ? C A 57 C U 98 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog51 hydrog ? ? B G 58 O6 ? ? ? 1_555 B G 97 N2 ? ? C G 58 C G 97 1_555 ? ? ? ? ? ? 'G-G MISPAIR' ? ? ? hydrog52 hydrog ? ? B G 58 N1 ? ? ? 1_555 B C 99 N3 ? ? C G 58 C C 99 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? B G 58 N2 ? ? ? 1_555 B C 99 O2 ? ? C G 58 C C 99 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? B G 58 O6 ? ? ? 1_555 B C 99 N4 ? ? C G 58 C C 99 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? B G 59 O6 ? ? ? 1_555 B C 96 N4 ? ? C G 59 C C 96 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog56 hydrog ? ? B G 59 N2 ? ? ? 1_555 B A 100 N7 ? ? C G 59 C A 100 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog57 hydrog ? ? B G 60 N2 ? ? ? 1_555 B C 95 O2 ? ? C G 60 C C 95 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog58 hydrog ? ? B G 61 N1 ? ? ? 1_555 B U 94 O2 ? ? C G 61 C U 94 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog59 hydrog ? ? B U 62 N3 ? ? ? 1_555 B A 93 N1 ? ? C U 62 C A 93 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? B U 62 O4 ? ? ? 1_555 B A 93 N6 ? ? C U 62 C A 93 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? B G 63 N2 ? ? ? 1_555 B A 92 N7 ? ? C G 63 C A 92 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog62 hydrog ? ? B A 64 N3 ? ? ? 1_555 B G 79 N2 ? ? C A 64 C G 79 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog63 hydrog ? ? B U 66 N3 ? ? ? 1_555 B U 77 O2 ? ? C U 66 C U 77 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog64 hydrog ? ? B U 66 O4 ? ? ? 1_555 B U 77 N3 ? ? C U 66 C U 77 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog65 hydrog ? ? B C 67 N3 ? ? ? 1_555 B G 76 N1 ? ? C C 67 C G 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? B C 67 N4 ? ? ? 1_555 B G 76 O6 ? ? C C 67 C G 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? B C 67 O2 ? ? ? 1_555 B G 76 N2 ? ? C C 67 C G 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? B C 68 N3 ? ? ? 1_555 B G 75 N1 ? ? C C 68 C G 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? B C 68 N4 ? ? ? 1_555 B G 75 O6 ? ? C C 68 C G 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? B C 68 O2 ? ? ? 1_555 B G 75 N2 ? ? C C 68 C G 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? B A 78 N7 ? ? ? 1_555 B G 91 N2 ? ? C A 78 C G 91 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog72 hydrog ? ? B G 79 N1 ? ? ? 1_555 B C 90 N3 ? ? C G 79 C C 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? B G 79 N2 ? ? ? 1_555 B C 90 O2 ? ? C G 79 C C 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? B G 79 O6 ? ? ? 1_555 B C 90 N4 ? ? C G 79 C C 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? B G 80 N1 ? ? ? 1_555 B C 89 N3 ? ? C G 80 C C 89 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? B G 80 N2 ? ? ? 1_555 B C 89 O2 ? ? C G 80 C C 89 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? B G 80 O6 ? ? ? 1_555 B C 89 N4 ? ? C G 80 C C 89 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? B G 81 N1 ? ? ? 1_555 B C 88 N3 ? ? C G 81 C C 88 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog79 hydrog ? ? B C 82 N3 ? ? ? 1_555 B G 87 N1 ? ? C C 82 C G 87 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog80 hydrog ? ? B C 82 N4 ? ? ? 1_555 B G 87 O6 ? ? C C 82 C G 87 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog81 hydrog ? ? B C 82 O2 ? ? ? 1_555 B G 87 N2 ? ? C C 82 C G 87 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? B G 83 N2 ? ? ? 1_555 B A 86 N7 ? ? C G 83 C A 86 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog83 hydrog ? ? B C 96 O2 ? ? ? 1_555 B A 100 N6 ? ? C C 96 C A 100 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OP1 ? B U 7 ? C U 7 ? 1_555 MG ? F MG . ? C MG 204 ? 1_555 OP1 ? B C 82 ? C C 82 ? 1_555 81.2 ? 2 OP1 ? B G 27 ? C G 27 ? 1_555 MG ? C MG . ? C MG 201 ? 1_555 OP1 ? B U 62 ? C U 62 ? 1_555 78.7 ? 3 OP2 ? B G 29 ? C G 29 ? 1_555 MG ? D MG . ? C MG 202 ? 1_555 OP1 ? B G 101 ? C G 101 ? 1_555 71.9 ? 4 OP2 ? B G 29 ? C G 29 ? 1_555 MG ? D MG . ? C MG 202 ? 1_555 OP2 ? B C 102 ? C C 102 ? 1_555 145.6 ? 5 OP1 ? B G 101 ? C G 101 ? 1_555 MG ? D MG . ? C MG 202 ? 1_555 OP2 ? B C 102 ? C C 102 ? 1_555 80.3 ? 6 OP2 ? B G 29 ? C G 29 ? 1_555 MG ? D MG . ? C MG 202 ? 1_555 O4 ? B U 103 ? C U 103 ? 1_555 102.2 ? 7 OP1 ? B G 101 ? C G 101 ? 1_555 MG ? D MG . ? C MG 202 ? 1_555 O4 ? B U 103 ? C U 103 ? 1_555 111.4 ? 8 OP2 ? B C 102 ? C C 102 ? 1_555 MG ? D MG . ? C MG 202 ? 1_555 O4 ? B U 103 ? C U 103 ? 1_555 106.7 ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ILE A 35 ? VAL A 40 ? ILE B 40 VAL B 45 AA1 2 GLN A 49 ? PHE A 54 ? GLN B 54 PHE B 59 AA1 3 THR A 6 ? ASN A 10 ? THR B 11 ASN B 15 AA1 4 ARG A 78 ? TYR A 81 ? ARG B 83 TYR B 86 AA2 1 PRO A 71 ? PHE A 72 ? PRO B 76 PHE B 77 AA2 2 LYS A 75 ? PRO A 76 ? LYS B 80 PRO B 81 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ASP A 37 ? N ASP B 42 O ILE A 53 ? O ILE B 58 AA1 2 3 O ALA A 50 ? O ALA B 55 N ILE A 9 ? N ILE B 14 AA1 3 4 N TYR A 8 ? N TYR B 13 O GLN A 80 ? O GLN B 85 AA2 1 2 N PHE A 72 ? N PHE B 77 O LYS A 75 ? O LYS B 80 # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 46 B MSE 51 ? MET 'modified residue' 2 A MSE 67 B MSE 72 ? MET 'modified residue' 3 A MSE 77 B MSE 82 ? MET 'modified residue' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 40.6191 -153.6712 761.2609 1.6375 1.0133 0.3209 -0.0885 -0.1146 0.1989 0.3524 0.0350 0.0388 0.0615 0.1097 0.0064 0.2928 0.0371 0.1558 0.0493 -0.0660 0.0229 0.2193 0.0478 -0.0953 'X-RAY DIFFRACTION' 2 ? refined 42.0671 -156.7037 751.5290 0.9646 1.1274 0.3918 -0.2246 -0.2349 -0.2002 0.1196 0.2114 0.2861 0.1480 -0.0237 0.0525 0.1131 -0.0073 -0.0018 0.1188 -0.1772 -0.1534 0.2978 -0.1006 -0.0640 'X-RAY DIFFRACTION' 3 ? refined 42.3941 -160.2353 738.1968 0.5663 1.2802 1.4787 0.0636 0.0371 0.1194 0.0939 0.0616 0.4392 0.0255 0.1999 0.1015 -0.5817 -0.1138 -0.0328 -0.4298 -0.8025 -0.0995 -0.2099 -0.2226 0.2676 'X-RAY DIFFRACTION' 4 ? refined 31.7124 -156.4511 744.7798 0.5328 0.5896 0.9003 -0.0050 -0.0754 -0.1597 0.1010 0.1083 0.0574 -0.1073 0.0233 -0.0284 -0.3051 -0.3469 -0.0008 0.1200 0.5288 -0.4103 -0.0649 0.5209 -0.2137 'X-RAY DIFFRACTION' 5 ? refined 34.2120 -149.7389 748.5748 0.8237 0.7703 0.8588 -0.1636 0.1291 -0.1799 0.0116 0.0045 0.0283 0.0112 -0.0049 -0.0117 -0.3122 0.4337 0.0000 -0.0262 0.4368 0.2939 -0.0382 -0.2574 -0.1356 'X-RAY DIFFRACTION' 6 ? refined 47.7350 -153.6299 741.4880 0.2376 0.7090 2.1993 -0.1356 -0.5729 -0.1381 -0.0007 -0.0031 0.0199 0.0020 0.0028 -0.0035 0.1436 -0.1514 0.1467 -0.4390 0.2058 -0.2241 0.1575 -0.0865 0.2078 'X-RAY DIFFRACTION' 7 ? refined 36.1333 -151.6400 752.7831 0.7690 0.4765 0.2714 -0.1652 -0.0529 -0.4183 0.0007 0.7641 0.3372 -0.0232 -0.0162 0.5086 0.0080 -0.0129 -0.4890 0.1327 -0.0862 -0.1121 -0.3612 -0.0423 0.0789 'X-RAY DIFFRACTION' 8 ? refined 32.9802 -159.9406 757.4525 0.8561 0.9745 0.1394 -0.0630 -0.0446 -0.0043 0.1593 0.4666 0.1801 -0.1483 0.1515 -0.0435 0.1749 -0.0178 0.6208 0.0652 -0.1714 0.0276 -0.0874 -0.0721 -0.0468 'X-RAY DIFFRACTION' 9 ? refined 37.6691 -166.1625 745.1451 0.6225 1.1105 1.5206 -0.0682 -0.1305 -0.0184 0.1718 2.0975 0.8872 -0.5292 0.1680 -1.0877 -1.1193 0.1184 -0.0195 0.4721 -0.0510 -0.7037 1.0243 -0.2438 0.2474 'X-RAY DIFFRACTION' 10 ? refined 42.5954 -155.2320 755.9720 0.9658 1.1078 0.5488 -0.0982 -0.2425 -0.0407 0.1661 1.5432 0.1336 0.3853 0.1095 0.4670 0.2075 -0.0969 0.0698 -0.5565 0.0763 0.0076 0.5088 -0.2034 0.4775 'X-RAY DIFFRACTION' 11 ? refined 39.6864 -141.0731 756.5213 1.1457 1.3697 0.6429 -0.1441 -0.6077 0.4516 0.0422 0.1865 0.3780 -0.0194 0.1188 0.0383 -0.0115 0.0029 0.0091 -0.0775 0.0039 0.0247 0.0176 -0.0162 -0.0734 'X-RAY DIFFRACTION' 12 ? refined 65.6915 -146.0327 723.8217 0.8264 1.0194 1.4597 -0.0866 -0.3798 0.1734 2.8215 1.8323 0.9908 1.1766 -0.9273 0.6628 -0.2537 0.1594 -0.0056 0.3541 0.3026 0.4643 -0.4686 -0.1921 -0.5839 'X-RAY DIFFRACTION' 13 ? refined 83.7583 -146.7647 738.8935 0.9320 1.2013 1.5487 0.0381 0.1816 -0.1486 0.2013 0.2460 0.2679 -0.1449 0.2347 -0.0717 -0.5088 0.0812 0.0001 -0.9772 1.3338 0.9739 0.5878 -0.1022 -0.0595 'X-RAY DIFFRACTION' 14 ? refined 74.2971 -142.9455 724.4702 0.7796 0.9828 1.3295 -0.1147 -0.1079 -0.0902 0.1148 1.8913 1.4443 -0.3513 -0.1558 -0.4107 -0.2158 0.1885 -0.0001 0.0550 0.5770 0.7734 -0.2491 -0.0990 -0.4259 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 B 0 B 0 ;chain 'B' and (resid 6 through 10 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 B 0 B 0 ;chain 'B' and (resid 11 through 15 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 3 3 B 0 B 0 ;chain 'B' and (resid 16 through 22 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 4 4 B 0 B 0 ;chain 'B' and (resid 23 through 37 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 5 5 B 0 B 0 ;chain 'B' and (resid 38 through 45 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 6 6 B 0 B 0 ;chain 'B' and (resid 46 through 54 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 7 7 B 0 B 0 ;chain 'B' and (resid 55 through 61 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 8 8 B 0 B 0 ;chain 'B' and (resid 62 through 72 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 9 9 B 0 B 0 ;chain 'B' and (resid 73 through 82 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 10 10 B 0 B 0 ;chain 'B' and (resid 83 through 91 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 11 11 B 0 B 0 ;chain 'B' and (resid 92 through 96 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 12 12 C 0 C 0 ;chain 'C' and (resid 1 through 65 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 13 13 C 0 C 0 ;chain 'C' and (resid 66 through 82 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 14 14 C 0 C 0 ;chain 'C' and (resid 83 through 119 ) ; ? ? ? ? ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B LYS 88 ? A LYS 83 2 1 Y 1 C A 15 ? B A 15 3 1 Y 1 C A 16 ? B A 16 4 1 Y 1 C A 17 ? B A 17 5 1 Y 1 C U 18 ? B U 18 6 1 Y 1 C C 43 ? B C 43 7 1 Y 1 C G 44 ? B G 44 8 1 Y 1 C G 45 ? B G 45 9 1 Y 1 C G 46 ? B G 46 10 1 Y 1 C U 47 ? B U 47 11 1 Y 1 C U 48 ? B U 48 12 1 Y 1 C U 49 ? B U 49 13 1 Y 1 C U 50 ? B U 50 14 1 Y 1 C U 51 ? B U 51 15 1 Y 1 C C 52 ? B C 52 16 1 Y 1 C C 53 ? B C 53 17 1 Y 1 C C 54 ? B C 54 18 1 Y 1 C G 55 ? B G 55 19 1 Y 1 C U 56 ? B U 56 20 1 Y 1 C U 70 ? B U 70 21 1 Y 1 C U 71 ? B U 71 22 1 Y 1 C U 72 ? B U 72 23 1 Y 1 C U 73 ? B U 73 24 1 Y 1 C A 74 ? B A 74 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 2BA P P N R 1 2BA O1P O N N 2 2BA O2P O N N 3 2BA "O5'" O N N 4 2BA "C5'" C N N 5 2BA "C4'" C N R 6 2BA "O4'" O N N 7 2BA "C3'" C N S 8 2BA "O3'" O N N 9 2BA "C2'" C N R 10 2BA "O2'" O N N 11 2BA "C1'" C N R 12 2BA N9 N Y N 13 2BA C8 C Y N 14 2BA N7 N Y N 15 2BA C5 C Y N 16 2BA C6 C Y N 17 2BA N6 N N N 18 2BA N1 N Y N 19 2BA C2 C Y N 20 2BA N3 N Y N 21 2BA C4 C Y N 22 2BA P1 P N R 23 2BA O1P1 O N N 24 2BA O2P1 O N N 25 2BA "O5'1" O N N 26 2BA "C5'1" C N N 27 2BA "C4'1" C N R 28 2BA "O4'1" O N N 29 2BA "C3'1" C N S 30 2BA "O3'1" O N N 31 2BA "C2'1" C N R 32 2BA "O2'1" O N N 33 2BA "C1'1" C N R 34 2BA N91 N Y N 35 2BA C81 C Y N 36 2BA N71 N Y N 37 2BA C51 C Y N 38 2BA C61 C Y N 39 2BA N61 N N N 40 2BA N11 N Y N 41 2BA C21 C Y N 42 2BA N31 N Y N 43 2BA C41 C Y N 44 2BA "H5'" H N N 45 2BA "H5'A" H N N 46 2BA "H4'" H N N 47 2BA "H3'" H N N 48 2BA "H2'" H N N 49 2BA "HO2'" H N N 50 2BA "H1'" H N N 51 2BA H8 H N N 52 2BA HN6 H N N 53 2BA HN6A H N N 54 2BA H2 H N N 55 2BA "HC5'" H N N 56 2BA HC5A H N N 57 2BA "HC4'" H N N 58 2BA "HC3'" H N N 59 2BA "HC2'" H N N 60 2BA HO2A H N N 61 2BA "HC1'" H N N 62 2BA HC8 H N N 63 2BA H1N6 H N N 64 2BA H1NA H N N 65 2BA HC2 H N N 66 2BA H2P H N N 67 2BA H2OP H N N 68 A OP3 O N N 69 A P P N N 70 A OP1 O N N 71 A OP2 O N N 72 A "O5'" O N N 73 A "C5'" C N N 74 A "C4'" C N R 75 A "O4'" O N N 76 A "C3'" C N S 77 A "O3'" O N N 78 A "C2'" C N R 79 A "O2'" O N N 80 A "C1'" C N R 81 A N9 N Y N 82 A C8 C Y N 83 A N7 N Y N 84 A C5 C Y N 85 A C6 C Y N 86 A N6 N N N 87 A N1 N Y N 88 A C2 C Y N 89 A N3 N Y N 90 A C4 C Y N 91 A HOP3 H N N 92 A HOP2 H N N 93 A "H5'" H N N 94 A "H5''" H N N 95 A "H4'" H N N 96 A "H3'" H N N 97 A "HO3'" H N N 98 A "H2'" H N N 99 A "HO2'" H N N 100 A "H1'" H N N 101 A H8 H N N 102 A H61 H N N 103 A H62 H N N 104 A H2 H N N 105 ALA N N N N 106 ALA CA C N S 107 ALA C C N N 108 ALA O O N N 109 ALA CB C N N 110 ALA OXT O N N 111 ALA H H N N 112 ALA H2 H N N 113 ALA HA H N N 114 ALA HB1 H N N 115 ALA HB2 H N N 116 ALA HB3 H N N 117 ALA HXT H N N 118 ARG N N N N 119 ARG CA C N S 120 ARG C C N N 121 ARG O O N N 122 ARG CB C N N 123 ARG CG C N N 124 ARG CD C N N 125 ARG NE N N N 126 ARG CZ C N N 127 ARG NH1 N N N 128 ARG NH2 N N N 129 ARG OXT O N N 130 ARG H H N N 131 ARG H2 H N N 132 ARG HA H N N 133 ARG HB2 H N N 134 ARG HB3 H N N 135 ARG HG2 H N N 136 ARG HG3 H N N 137 ARG HD2 H N N 138 ARG HD3 H N N 139 ARG HE H N N 140 ARG HH11 H N N 141 ARG HH12 H N N 142 ARG HH21 H N N 143 ARG HH22 H N N 144 ARG HXT H N N 145 ASN N N N N 146 ASN CA C N S 147 ASN C C N N 148 ASN O O N N 149 ASN CB C N N 150 ASN CG C N N 151 ASN OD1 O N N 152 ASN ND2 N N N 153 ASN OXT O N N 154 ASN H H N N 155 ASN H2 H N N 156 ASN HA H N N 157 ASN HB2 H N N 158 ASN HB3 H N N 159 ASN HD21 H N N 160 ASN HD22 H N N 161 ASN HXT H N N 162 ASP N N N N 163 ASP CA C N S 164 ASP C C N N 165 ASP O O N N 166 ASP CB C N N 167 ASP CG C N N 168 ASP OD1 O N N 169 ASP OD2 O N N 170 ASP OXT O N N 171 ASP H H N N 172 ASP H2 H N N 173 ASP HA H N N 174 ASP HB2 H N N 175 ASP HB3 H N N 176 ASP HD2 H N N 177 ASP HXT H N N 178 C OP3 O N N 179 C P P N N 180 C OP1 O N N 181 C OP2 O N N 182 C "O5'" O N N 183 C "C5'" C N N 184 C "C4'" C N R 185 C "O4'" O N N 186 C "C3'" C N S 187 C "O3'" O N N 188 C "C2'" C N R 189 C "O2'" O N N 190 C "C1'" C N R 191 C N1 N N N 192 C C2 C N N 193 C O2 O N N 194 C N3 N N N 195 C C4 C N N 196 C N4 N N N 197 C C5 C N N 198 C C6 C N N 199 C HOP3 H N N 200 C HOP2 H N N 201 C "H5'" H N N 202 C "H5''" H N N 203 C "H4'" H N N 204 C "H3'" H N N 205 C "HO3'" H N N 206 C "H2'" H N N 207 C "HO2'" H N N 208 C "H1'" H N N 209 C H41 H N N 210 C H42 H N N 211 C H5 H N N 212 C H6 H N N 213 EDO C1 C N N 214 EDO O1 O N N 215 EDO C2 C N N 216 EDO O2 O N N 217 EDO H11 H N N 218 EDO H12 H N N 219 EDO HO1 H N N 220 EDO H21 H N N 221 EDO H22 H N N 222 EDO HO2 H N N 223 G OP3 O N N 224 G P P N N 225 G OP1 O N N 226 G OP2 O N N 227 G "O5'" O N N 228 G "C5'" C N N 229 G "C4'" C N R 230 G "O4'" O N N 231 G "C3'" C N S 232 G "O3'" O N N 233 G "C2'" C N R 234 G "O2'" O N N 235 G "C1'" C N R 236 G N9 N Y N 237 G C8 C Y N 238 G N7 N Y N 239 G C5 C Y N 240 G C6 C N N 241 G O6 O N N 242 G N1 N N N 243 G C2 C N N 244 G N2 N N N 245 G N3 N N N 246 G C4 C Y N 247 G HOP3 H N N 248 G HOP2 H N N 249 G "H5'" H N N 250 G "H5''" H N N 251 G "H4'" H N N 252 G "H3'" H N N 253 G "HO3'" H N N 254 G "H2'" H N N 255 G "HO2'" H N N 256 G "H1'" H N N 257 G H8 H N N 258 G H1 H N N 259 G H21 H N N 260 G H22 H N N 261 GLN N N N N 262 GLN CA C N S 263 GLN C C N N 264 GLN O O N N 265 GLN CB C N N 266 GLN CG C N N 267 GLN CD C N N 268 GLN OE1 O N N 269 GLN NE2 N N N 270 GLN OXT O N N 271 GLN H H N N 272 GLN H2 H N N 273 GLN HA H N N 274 GLN HB2 H N N 275 GLN HB3 H N N 276 GLN HG2 H N N 277 GLN HG3 H N N 278 GLN HE21 H N N 279 GLN HE22 H N N 280 GLN HXT H N N 281 GLU N N N N 282 GLU CA C N S 283 GLU C C N N 284 GLU O O N N 285 GLU CB C N N 286 GLU CG C N N 287 GLU CD C N N 288 GLU OE1 O N N 289 GLU OE2 O N N 290 GLU OXT O N N 291 GLU H H N N 292 GLU H2 H N N 293 GLU HA H N N 294 GLU HB2 H N N 295 GLU HB3 H N N 296 GLU HG2 H N N 297 GLU HG3 H N N 298 GLU HE2 H N N 299 GLU HXT H N N 300 GLY N N N N 301 GLY CA C N N 302 GLY C C N N 303 GLY O O N N 304 GLY OXT O N N 305 GLY H H N N 306 GLY H2 H N N 307 GLY HA2 H N N 308 GLY HA3 H N N 309 GLY HXT H N N 310 HIS N N N N 311 HIS CA C N S 312 HIS C C N N 313 HIS O O N N 314 HIS CB C N N 315 HIS CG C Y N 316 HIS ND1 N Y N 317 HIS CD2 C Y N 318 HIS CE1 C Y N 319 HIS NE2 N Y N 320 HIS OXT O N N 321 HIS H H N N 322 HIS H2 H N N 323 HIS HA H N N 324 HIS HB2 H N N 325 HIS HB3 H N N 326 HIS HD1 H N N 327 HIS HD2 H N N 328 HIS HE1 H N N 329 HIS HE2 H N N 330 HIS HXT H N N 331 ILE N N N N 332 ILE CA C N S 333 ILE C C N N 334 ILE O O N N 335 ILE CB C N S 336 ILE CG1 C N N 337 ILE CG2 C N N 338 ILE CD1 C N N 339 ILE OXT O N N 340 ILE H H N N 341 ILE H2 H N N 342 ILE HA H N N 343 ILE HB H N N 344 ILE HG12 H N N 345 ILE HG13 H N N 346 ILE HG21 H N N 347 ILE HG22 H N N 348 ILE HG23 H N N 349 ILE HD11 H N N 350 ILE HD12 H N N 351 ILE HD13 H N N 352 ILE HXT H N N 353 K K K N N 354 LEU N N N N 355 LEU CA C N S 356 LEU C C N N 357 LEU O O N N 358 LEU CB C N N 359 LEU CG C N N 360 LEU CD1 C N N 361 LEU CD2 C N N 362 LEU OXT O N N 363 LEU H H N N 364 LEU H2 H N N 365 LEU HA H N N 366 LEU HB2 H N N 367 LEU HB3 H N N 368 LEU HG H N N 369 LEU HD11 H N N 370 LEU HD12 H N N 371 LEU HD13 H N N 372 LEU HD21 H N N 373 LEU HD22 H N N 374 LEU HD23 H N N 375 LEU HXT H N N 376 LYS N N N N 377 LYS CA C N S 378 LYS C C N N 379 LYS O O N N 380 LYS CB C N N 381 LYS CG C N N 382 LYS CD C N N 383 LYS CE C N N 384 LYS NZ N N N 385 LYS OXT O N N 386 LYS H H N N 387 LYS H2 H N N 388 LYS HA H N N 389 LYS HB2 H N N 390 LYS HB3 H N N 391 LYS HG2 H N N 392 LYS HG3 H N N 393 LYS HD2 H N N 394 LYS HD3 H N N 395 LYS HE2 H N N 396 LYS HE3 H N N 397 LYS HZ1 H N N 398 LYS HZ2 H N N 399 LYS HZ3 H N N 400 LYS HXT H N N 401 MG MG MG N N 402 MSE N N N N 403 MSE CA C N S 404 MSE C C N N 405 MSE O O N N 406 MSE OXT O N N 407 MSE CB C N N 408 MSE CG C N N 409 MSE SE SE N N 410 MSE CE C N N 411 MSE H H N N 412 MSE H2 H N N 413 MSE HA H N N 414 MSE HXT H N N 415 MSE HB2 H N N 416 MSE HB3 H N N 417 MSE HG2 H N N 418 MSE HG3 H N N 419 MSE HE1 H N N 420 MSE HE2 H N N 421 MSE HE3 H N N 422 PHE N N N N 423 PHE CA C N S 424 PHE C C N N 425 PHE O O N N 426 PHE CB C N N 427 PHE CG C Y N 428 PHE CD1 C Y N 429 PHE CD2 C Y N 430 PHE CE1 C Y N 431 PHE CE2 C Y N 432 PHE CZ C Y N 433 PHE OXT O N N 434 PHE H H N N 435 PHE H2 H N N 436 PHE HA H N N 437 PHE HB2 H N N 438 PHE HB3 H N N 439 PHE HD1 H N N 440 PHE HD2 H N N 441 PHE HE1 H N N 442 PHE HE2 H N N 443 PHE HZ H N N 444 PHE HXT H N N 445 PRO N N N N 446 PRO CA C N S 447 PRO C C N N 448 PRO O O N N 449 PRO CB C N N 450 PRO CG C N N 451 PRO CD C N N 452 PRO OXT O N N 453 PRO H H N N 454 PRO HA H N N 455 PRO HB2 H N N 456 PRO HB3 H N N 457 PRO HG2 H N N 458 PRO HG3 H N N 459 PRO HD2 H N N 460 PRO HD3 H N N 461 PRO HXT H N N 462 SER N N N N 463 SER CA C N S 464 SER C C N N 465 SER O O N N 466 SER CB C N N 467 SER OG O N N 468 SER OXT O N N 469 SER H H N N 470 SER H2 H N N 471 SER HA H N N 472 SER HB2 H N N 473 SER HB3 H N N 474 SER HG H N N 475 SER HXT H N N 476 THR N N N N 477 THR CA C N S 478 THR C C N N 479 THR O O N N 480 THR CB C N R 481 THR OG1 O N N 482 THR CG2 C N N 483 THR OXT O N N 484 THR H H N N 485 THR H2 H N N 486 THR HA H N N 487 THR HB H N N 488 THR HG1 H N N 489 THR HG21 H N N 490 THR HG22 H N N 491 THR HG23 H N N 492 THR HXT H N N 493 TYR N N N N 494 TYR CA C N S 495 TYR C C N N 496 TYR O O N N 497 TYR CB C N N 498 TYR CG C Y N 499 TYR CD1 C Y N 500 TYR CD2 C Y N 501 TYR CE1 C Y N 502 TYR CE2 C Y N 503 TYR CZ C Y N 504 TYR OH O N N 505 TYR OXT O N N 506 TYR H H N N 507 TYR H2 H N N 508 TYR HA H N N 509 TYR HB2 H N N 510 TYR HB3 H N N 511 TYR HD1 H N N 512 TYR HD2 H N N 513 TYR HE1 H N N 514 TYR HE2 H N N 515 TYR HH H N N 516 TYR HXT H N N 517 U OP3 O N N 518 U P P N N 519 U OP1 O N N 520 U OP2 O N N 521 U "O5'" O N N 522 U "C5'" C N N 523 U "C4'" C N R 524 U "O4'" O N N 525 U "C3'" C N S 526 U "O3'" O N N 527 U "C2'" C N R 528 U "O2'" O N N 529 U "C1'" C N R 530 U N1 N N N 531 U C2 C N N 532 U O2 O N N 533 U N3 N N N 534 U C4 C N N 535 U O4 O N N 536 U C5 C N N 537 U C6 C N N 538 U HOP3 H N N 539 U HOP2 H N N 540 U "H5'" H N N 541 U "H5''" H N N 542 U "H4'" H N N 543 U "H3'" H N N 544 U "HO3'" H N N 545 U "H2'" H N N 546 U "HO2'" H N N 547 U "H1'" H N N 548 U H3 H N N 549 U H5 H N N 550 U H6 H N N 551 VAL N N N N 552 VAL CA C N S 553 VAL C C N N 554 VAL O O N N 555 VAL CB C N N 556 VAL CG1 C N N 557 VAL CG2 C N N 558 VAL OXT O N N 559 VAL H H N N 560 VAL H2 H N N 561 VAL HA H N N 562 VAL HB H N N 563 VAL HG11 H N N 564 VAL HG12 H N N 565 VAL HG13 H N N 566 VAL HG21 H N N 567 VAL HG22 H N N 568 VAL HG23 H N N 569 VAL HXT H N N 570 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 2BA P O1P doub N N 1 2BA P O2P sing N N 2 2BA P "O5'" sing N N 3 2BA P "O3'1" sing N N 4 2BA "O5'" "C5'" sing N N 5 2BA "C5'" "C4'" sing N N 6 2BA "C4'" "O4'" sing N N 7 2BA "C4'" "C3'" sing N N 8 2BA "O4'" "C1'" sing N N 9 2BA "C3'" "O3'" sing N N 10 2BA "C3'" "C2'" sing N N 11 2BA "O3'" P1 sing N N 12 2BA "C2'" "O2'" sing N N 13 2BA "C2'" "C1'" sing N N 14 2BA "C1'" N9 sing N N 15 2BA N9 C8 sing Y N 16 2BA N9 C4 sing Y N 17 2BA C8 N7 doub Y N 18 2BA N7 C5 sing Y N 19 2BA C5 C6 doub Y N 20 2BA C5 C4 sing Y N 21 2BA C6 N6 sing N N 22 2BA C6 N1 sing Y N 23 2BA N1 C2 doub Y N 24 2BA C2 N3 sing Y N 25 2BA N3 C4 doub Y N 26 2BA P1 O1P1 doub N N 27 2BA P1 O2P1 sing N N 28 2BA P1 "O5'1" sing N N 29 2BA "O5'1" "C5'1" sing N N 30 2BA "C5'1" "C4'1" sing N N 31 2BA "C4'1" "O4'1" sing N N 32 2BA "C4'1" "C3'1" sing N N 33 2BA "O4'1" "C1'1" sing N N 34 2BA "C3'1" "O3'1" sing N N 35 2BA "C3'1" "C2'1" sing N N 36 2BA "C2'1" "O2'1" sing N N 37 2BA "C2'1" "C1'1" sing N N 38 2BA "C1'1" N91 sing N N 39 2BA N91 C81 sing Y N 40 2BA N91 C41 sing Y N 41 2BA C81 N71 doub Y N 42 2BA N71 C51 sing Y N 43 2BA C51 C61 doub Y N 44 2BA C51 C41 sing Y N 45 2BA C61 N61 sing N N 46 2BA C61 N11 sing Y N 47 2BA N11 C21 doub Y N 48 2BA C21 N31 sing Y N 49 2BA N31 C41 doub Y N 50 2BA "C5'" "H5'" sing N N 51 2BA "C5'" "H5'A" sing N N 52 2BA "C4'" "H4'" sing N N 53 2BA "C3'" "H3'" sing N N 54 2BA "C2'" "H2'" sing N N 55 2BA "O2'" "HO2'" sing N N 56 2BA "C1'" "H1'" sing N N 57 2BA C8 H8 sing N N 58 2BA N6 HN6 sing N N 59 2BA N6 HN6A sing N N 60 2BA C2 H2 sing N N 61 2BA "C5'1" "HC5'" sing N N 62 2BA "C5'1" HC5A sing N N 63 2BA "C4'1" "HC4'" sing N N 64 2BA "C3'1" "HC3'" sing N N 65 2BA "C2'1" "HC2'" sing N N 66 2BA "O2'1" HO2A sing N N 67 2BA "C1'1" "HC1'" sing N N 68 2BA C81 HC8 sing N N 69 2BA N61 H1N6 sing N N 70 2BA N61 H1NA sing N N 71 2BA C21 HC2 sing N N 72 2BA O2P H2P sing N N 73 2BA O2P1 H2OP sing N N 74 A OP3 P sing N N 75 A OP3 HOP3 sing N N 76 A P OP1 doub N N 77 A P OP2 sing N N 78 A P "O5'" sing N N 79 A OP2 HOP2 sing N N 80 A "O5'" "C5'" sing N N 81 A "C5'" "C4'" sing N N 82 A "C5'" "H5'" sing N N 83 A "C5'" "H5''" sing N N 84 A "C4'" "O4'" sing N N 85 A "C4'" "C3'" sing N N 86 A "C4'" "H4'" sing N N 87 A "O4'" "C1'" sing N N 88 A "C3'" "O3'" sing N N 89 A "C3'" "C2'" sing N N 90 A "C3'" "H3'" sing N N 91 A "O3'" "HO3'" sing N N 92 A "C2'" "O2'" sing N N 93 A "C2'" "C1'" sing N N 94 A "C2'" "H2'" sing N N 95 A "O2'" "HO2'" sing N N 96 A "C1'" N9 sing N N 97 A "C1'" "H1'" sing N N 98 A N9 C8 sing Y N 99 A N9 C4 sing Y N 100 A C8 N7 doub Y N 101 A C8 H8 sing N N 102 A N7 C5 sing Y N 103 A C5 C6 sing Y N 104 A C5 C4 doub Y N 105 A C6 N6 sing N N 106 A C6 N1 doub Y N 107 A N6 H61 sing N N 108 A N6 H62 sing N N 109 A N1 C2 sing Y N 110 A C2 N3 doub Y N 111 A C2 H2 sing N N 112 A N3 C4 sing Y N 113 ALA N CA sing N N 114 ALA N H sing N N 115 ALA N H2 sing N N 116 ALA CA C sing N N 117 ALA CA CB sing N N 118 ALA CA HA sing N N 119 ALA C O doub N N 120 ALA C OXT sing N N 121 ALA CB HB1 sing N N 122 ALA CB HB2 sing N N 123 ALA CB HB3 sing N N 124 ALA OXT HXT sing N N 125 ARG N CA sing N N 126 ARG N H sing N N 127 ARG N H2 sing N N 128 ARG CA C sing N N 129 ARG CA CB sing N N 130 ARG CA HA sing N N 131 ARG C O doub N N 132 ARG C OXT sing N N 133 ARG CB CG sing N N 134 ARG CB HB2 sing N N 135 ARG CB HB3 sing N N 136 ARG CG CD sing N N 137 ARG CG HG2 sing N N 138 ARG CG HG3 sing N N 139 ARG CD NE sing N N 140 ARG CD HD2 sing N N 141 ARG CD HD3 sing N N 142 ARG NE CZ sing N N 143 ARG NE HE sing N N 144 ARG CZ NH1 sing N N 145 ARG CZ NH2 doub N N 146 ARG NH1 HH11 sing N N 147 ARG NH1 HH12 sing N N 148 ARG NH2 HH21 sing N N 149 ARG NH2 HH22 sing N N 150 ARG OXT HXT sing N N 151 ASN N CA sing N N 152 ASN N H sing N N 153 ASN N H2 sing N N 154 ASN CA C sing N N 155 ASN CA CB sing N N 156 ASN CA HA sing N N 157 ASN C O doub N N 158 ASN C OXT sing N N 159 ASN CB CG sing N N 160 ASN CB HB2 sing N N 161 ASN CB HB3 sing N N 162 ASN CG OD1 doub N N 163 ASN CG ND2 sing N N 164 ASN ND2 HD21 sing N N 165 ASN ND2 HD22 sing N N 166 ASN OXT HXT sing N N 167 ASP N CA sing N N 168 ASP N H sing N N 169 ASP N H2 sing N N 170 ASP CA C sing N N 171 ASP CA CB sing N N 172 ASP CA HA sing N N 173 ASP C O doub N N 174 ASP C OXT sing N N 175 ASP CB CG sing N N 176 ASP CB HB2 sing N N 177 ASP CB HB3 sing N N 178 ASP CG OD1 doub N N 179 ASP CG OD2 sing N N 180 ASP OD2 HD2 sing N N 181 ASP OXT HXT sing N N 182 C OP3 P sing N N 183 C OP3 HOP3 sing N N 184 C P OP1 doub N N 185 C P OP2 sing N N 186 C P "O5'" sing N N 187 C OP2 HOP2 sing N N 188 C "O5'" "C5'" sing N N 189 C "C5'" "C4'" sing N N 190 C "C5'" "H5'" sing N N 191 C "C5'" "H5''" sing N N 192 C "C4'" "O4'" sing N N 193 C "C4'" "C3'" sing N N 194 C "C4'" "H4'" sing N N 195 C "O4'" "C1'" sing N N 196 C "C3'" "O3'" sing N N 197 C "C3'" "C2'" sing N N 198 C "C3'" "H3'" sing N N 199 C "O3'" "HO3'" sing N N 200 C "C2'" "O2'" sing N N 201 C "C2'" "C1'" sing N N 202 C "C2'" "H2'" sing N N 203 C "O2'" "HO2'" sing N N 204 C "C1'" N1 sing N N 205 C "C1'" "H1'" sing N N 206 C N1 C2 sing N N 207 C N1 C6 sing N N 208 C C2 O2 doub N N 209 C C2 N3 sing N N 210 C N3 C4 doub N N 211 C C4 N4 sing N N 212 C C4 C5 sing N N 213 C N4 H41 sing N N 214 C N4 H42 sing N N 215 C C5 C6 doub N N 216 C C5 H5 sing N N 217 C C6 H6 sing N N 218 EDO C1 O1 sing N N 219 EDO C1 C2 sing N N 220 EDO C1 H11 sing N N 221 EDO C1 H12 sing N N 222 EDO O1 HO1 sing N N 223 EDO C2 O2 sing N N 224 EDO C2 H21 sing N N 225 EDO C2 H22 sing N N 226 EDO O2 HO2 sing N N 227 G OP3 P sing N N 228 G OP3 HOP3 sing N N 229 G P OP1 doub N N 230 G P OP2 sing N N 231 G P "O5'" sing N N 232 G OP2 HOP2 sing N N 233 G "O5'" "C5'" sing N N 234 G "C5'" "C4'" sing N N 235 G "C5'" "H5'" sing N N 236 G "C5'" "H5''" sing N N 237 G "C4'" "O4'" sing N N 238 G "C4'" "C3'" sing N N 239 G "C4'" "H4'" sing N N 240 G "O4'" "C1'" sing N N 241 G "C3'" "O3'" sing N N 242 G "C3'" "C2'" sing N N 243 G "C3'" "H3'" sing N N 244 G "O3'" "HO3'" sing N N 245 G "C2'" "O2'" sing N N 246 G "C2'" "C1'" sing N N 247 G "C2'" "H2'" sing N N 248 G "O2'" "HO2'" sing N N 249 G "C1'" N9 sing N N 250 G "C1'" "H1'" sing N N 251 G N9 C8 sing Y N 252 G N9 C4 sing Y N 253 G C8 N7 doub Y N 254 G C8 H8 sing N N 255 G N7 C5 sing Y N 256 G C5 C6 sing N N 257 G C5 C4 doub Y N 258 G C6 O6 doub N N 259 G C6 N1 sing N N 260 G N1 C2 sing N N 261 G N1 H1 sing N N 262 G C2 N2 sing N N 263 G C2 N3 doub N N 264 G N2 H21 sing N N 265 G N2 H22 sing N N 266 G N3 C4 sing N N 267 GLN N CA sing N N 268 GLN N H sing N N 269 GLN N H2 sing N N 270 GLN CA C sing N N 271 GLN CA CB sing N N 272 GLN CA HA sing N N 273 GLN C O doub N N 274 GLN C OXT sing N N 275 GLN CB CG sing N N 276 GLN CB HB2 sing N N 277 GLN CB HB3 sing N N 278 GLN CG CD sing N N 279 GLN CG HG2 sing N N 280 GLN CG HG3 sing N N 281 GLN CD OE1 doub N N 282 GLN CD NE2 sing N N 283 GLN NE2 HE21 sing N N 284 GLN NE2 HE22 sing N N 285 GLN OXT HXT sing N N 286 GLU N CA sing N N 287 GLU N H sing N N 288 GLU N H2 sing N N 289 GLU CA C sing N N 290 GLU CA CB sing N N 291 GLU CA HA sing N N 292 GLU C O doub N N 293 GLU C OXT sing N N 294 GLU CB CG sing N N 295 GLU CB HB2 sing N N 296 GLU CB HB3 sing N N 297 GLU CG CD sing N N 298 GLU CG HG2 sing N N 299 GLU CG HG3 sing N N 300 GLU CD OE1 doub N N 301 GLU CD OE2 sing N N 302 GLU OE2 HE2 sing N N 303 GLU OXT HXT sing N N 304 GLY N CA sing N N 305 GLY N H sing N N 306 GLY N H2 sing N N 307 GLY CA C sing N N 308 GLY CA HA2 sing N N 309 GLY CA HA3 sing N N 310 GLY C O doub N N 311 GLY C OXT sing N N 312 GLY OXT HXT sing N N 313 HIS N CA sing N N 314 HIS N H sing N N 315 HIS N H2 sing N N 316 HIS CA C sing N N 317 HIS CA CB sing N N 318 HIS CA HA sing N N 319 HIS C O doub N N 320 HIS C OXT sing N N 321 HIS CB CG sing N N 322 HIS CB HB2 sing N N 323 HIS CB HB3 sing N N 324 HIS CG ND1 sing Y N 325 HIS CG CD2 doub Y N 326 HIS ND1 CE1 doub Y N 327 HIS ND1 HD1 sing N N 328 HIS CD2 NE2 sing Y N 329 HIS CD2 HD2 sing N N 330 HIS CE1 NE2 sing Y N 331 HIS CE1 HE1 sing N N 332 HIS NE2 HE2 sing N N 333 HIS OXT HXT sing N N 334 ILE N CA sing N N 335 ILE N H sing N N 336 ILE N H2 sing N N 337 ILE CA C sing N N 338 ILE CA CB sing N N 339 ILE CA HA sing N N 340 ILE C O doub N N 341 ILE C OXT sing N N 342 ILE CB CG1 sing N N 343 ILE CB CG2 sing N N 344 ILE CB HB sing N N 345 ILE CG1 CD1 sing N N 346 ILE CG1 HG12 sing N N 347 ILE CG1 HG13 sing N N 348 ILE CG2 HG21 sing N N 349 ILE CG2 HG22 sing N N 350 ILE CG2 HG23 sing N N 351 ILE CD1 HD11 sing N N 352 ILE CD1 HD12 sing N N 353 ILE CD1 HD13 sing N N 354 ILE OXT HXT sing N N 355 LEU N CA sing N N 356 LEU N H sing N N 357 LEU N H2 sing N N 358 LEU CA C sing N N 359 LEU CA CB sing N N 360 LEU CA HA sing N N 361 LEU C O doub N N 362 LEU C OXT sing N N 363 LEU CB CG sing N N 364 LEU CB HB2 sing N N 365 LEU CB HB3 sing N N 366 LEU CG CD1 sing N N 367 LEU CG CD2 sing N N 368 LEU CG HG sing N N 369 LEU CD1 HD11 sing N N 370 LEU CD1 HD12 sing N N 371 LEU CD1 HD13 sing N N 372 LEU CD2 HD21 sing N N 373 LEU CD2 HD22 sing N N 374 LEU CD2 HD23 sing N N 375 LEU OXT HXT sing N N 376 LYS N CA sing N N 377 LYS N H sing N N 378 LYS N H2 sing N N 379 LYS CA C sing N N 380 LYS CA CB sing N N 381 LYS CA HA sing N N 382 LYS C O doub N N 383 LYS C OXT sing N N 384 LYS CB CG sing N N 385 LYS CB HB2 sing N N 386 LYS CB HB3 sing N N 387 LYS CG CD sing N N 388 LYS CG HG2 sing N N 389 LYS CG HG3 sing N N 390 LYS CD CE sing N N 391 LYS CD HD2 sing N N 392 LYS CD HD3 sing N N 393 LYS CE NZ sing N N 394 LYS CE HE2 sing N N 395 LYS CE HE3 sing N N 396 LYS NZ HZ1 sing N N 397 LYS NZ HZ2 sing N N 398 LYS NZ HZ3 sing N N 399 LYS OXT HXT sing N N 400 MSE N CA sing N N 401 MSE N H sing N N 402 MSE N H2 sing N N 403 MSE CA C sing N N 404 MSE CA CB sing N N 405 MSE CA HA sing N N 406 MSE C O doub N N 407 MSE C OXT sing N N 408 MSE OXT HXT sing N N 409 MSE CB CG sing N N 410 MSE CB HB2 sing N N 411 MSE CB HB3 sing N N 412 MSE CG SE sing N N 413 MSE CG HG2 sing N N 414 MSE CG HG3 sing N N 415 MSE SE CE sing N N 416 MSE CE HE1 sing N N 417 MSE CE HE2 sing N N 418 MSE CE HE3 sing N N 419 PHE N CA sing N N 420 PHE N H sing N N 421 PHE N H2 sing N N 422 PHE CA C sing N N 423 PHE CA CB sing N N 424 PHE CA HA sing N N 425 PHE C O doub N N 426 PHE C OXT sing N N 427 PHE CB CG sing N N 428 PHE CB HB2 sing N N 429 PHE CB HB3 sing N N 430 PHE CG CD1 doub Y N 431 PHE CG CD2 sing Y N 432 PHE CD1 CE1 sing Y N 433 PHE CD1 HD1 sing N N 434 PHE CD2 CE2 doub Y N 435 PHE CD2 HD2 sing N N 436 PHE CE1 CZ doub Y N 437 PHE CE1 HE1 sing N N 438 PHE CE2 CZ sing Y N 439 PHE CE2 HE2 sing N N 440 PHE CZ HZ sing N N 441 PHE OXT HXT sing N N 442 PRO N CA sing N N 443 PRO N CD sing N N 444 PRO N H sing N N 445 PRO CA C sing N N 446 PRO CA CB sing N N 447 PRO CA HA sing N N 448 PRO C O doub N N 449 PRO C OXT sing N N 450 PRO CB CG sing N N 451 PRO CB HB2 sing N N 452 PRO CB HB3 sing N N 453 PRO CG CD sing N N 454 PRO CG HG2 sing N N 455 PRO CG HG3 sing N N 456 PRO CD HD2 sing N N 457 PRO CD HD3 sing N N 458 PRO OXT HXT sing N N 459 SER N CA sing N N 460 SER N H sing N N 461 SER N H2 sing N N 462 SER CA C sing N N 463 SER CA CB sing N N 464 SER CA HA sing N N 465 SER C O doub N N 466 SER C OXT sing N N 467 SER CB OG sing N N 468 SER CB HB2 sing N N 469 SER CB HB3 sing N N 470 SER OG HG sing N N 471 SER OXT HXT sing N N 472 THR N CA sing N N 473 THR N H sing N N 474 THR N H2 sing N N 475 THR CA C sing N N 476 THR CA CB sing N N 477 THR CA HA sing N N 478 THR C O doub N N 479 THR C OXT sing N N 480 THR CB OG1 sing N N 481 THR CB CG2 sing N N 482 THR CB HB sing N N 483 THR OG1 HG1 sing N N 484 THR CG2 HG21 sing N N 485 THR CG2 HG22 sing N N 486 THR CG2 HG23 sing N N 487 THR OXT HXT sing N N 488 TYR N CA sing N N 489 TYR N H sing N N 490 TYR N H2 sing N N 491 TYR CA C sing N N 492 TYR CA CB sing N N 493 TYR CA HA sing N N 494 TYR C O doub N N 495 TYR C OXT sing N N 496 TYR CB CG sing N N 497 TYR CB HB2 sing N N 498 TYR CB HB3 sing N N 499 TYR CG CD1 doub Y N 500 TYR CG CD2 sing Y N 501 TYR CD1 CE1 sing Y N 502 TYR CD1 HD1 sing N N 503 TYR CD2 CE2 doub Y N 504 TYR CD2 HD2 sing N N 505 TYR CE1 CZ doub Y N 506 TYR CE1 HE1 sing N N 507 TYR CE2 CZ sing Y N 508 TYR CE2 HE2 sing N N 509 TYR CZ OH sing N N 510 TYR OH HH sing N N 511 TYR OXT HXT sing N N 512 U OP3 P sing N N 513 U OP3 HOP3 sing N N 514 U P OP1 doub N N 515 U P OP2 sing N N 516 U P "O5'" sing N N 517 U OP2 HOP2 sing N N 518 U "O5'" "C5'" sing N N 519 U "C5'" "C4'" sing N N 520 U "C5'" "H5'" sing N N 521 U "C5'" "H5''" sing N N 522 U "C4'" "O4'" sing N N 523 U "C4'" "C3'" sing N N 524 U "C4'" "H4'" sing N N 525 U "O4'" "C1'" sing N N 526 U "C3'" "O3'" sing N N 527 U "C3'" "C2'" sing N N 528 U "C3'" "H3'" sing N N 529 U "O3'" "HO3'" sing N N 530 U "C2'" "O2'" sing N N 531 U "C2'" "C1'" sing N N 532 U "C2'" "H2'" sing N N 533 U "O2'" "HO2'" sing N N 534 U "C1'" N1 sing N N 535 U "C1'" "H1'" sing N N 536 U N1 C2 sing N N 537 U N1 C6 sing N N 538 U C2 O2 doub N N 539 U C2 N3 sing N N 540 U N3 C4 sing N N 541 U N3 H3 sing N N 542 U C4 O4 doub N N 543 U C4 C5 sing N N 544 U C5 C6 doub N N 545 U C5 H5 sing N N 546 U C6 H6 sing N N 547 VAL N CA sing N N 548 VAL N H sing N N 549 VAL N H2 sing N N 550 VAL CA C sing N N 551 VAL CA CB sing N N 552 VAL CA HA sing N N 553 VAL C O doub N N 554 VAL C OXT sing N N 555 VAL CB CG1 sing N N 556 VAL CB CG2 sing N N 557 VAL CB HB sing N N 558 VAL CG1 HG11 sing N N 559 VAL CG1 HG12 sing N N 560 VAL CG1 HG13 sing N N 561 VAL CG2 HG21 sing N N 562 VAL CG2 HG22 sing N N 563 VAL CG2 HG23 sing N N 564 VAL OXT HXT sing N N 565 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4W92 'double helix' 4W92 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B G 1 1_555 B C 119 1_555 -0.458 0.389 0.358 0.113 -15.742 2.128 1 C_G1:C119_C C 1 ? C 119 ? ? 1 1 B C 2 1_555 B G 118 1_555 0.711 -0.323 0.700 2.434 -25.800 6.169 2 C_C2:G118_C C 2 ? C 118 ? 19 1 1 B G 3 1_555 B C 117 1_555 -0.074 -0.203 0.274 -6.851 -22.794 -3.647 3 C_G3:C117_C C 3 ? C 117 ? 19 1 1 B C 4 1_555 B G 116 1_555 -0.214 -0.111 0.061 7.613 -17.930 -3.986 4 C_C4:G116_C C 4 ? C 116 ? 19 1 1 B G 5 1_555 B C 115 1_555 0.414 -0.136 -0.266 -8.289 -13.716 -2.435 5 C_G5:C115_C C 5 ? C 115 ? 19 1 1 B C 6 1_555 B G 114 1_555 0.837 -0.022 -0.001 -2.364 -6.644 9.468 6 C_C6:G114_C C 6 ? C 114 ? 19 1 1 B U 7 1_555 B A 113 1_555 -0.704 0.340 -0.258 3.118 4.900 2.870 7 C_U7:A113_C C 7 ? C 113 ? 20 1 1 B C 19 1_555 B G 14 1_555 0.008 -0.096 0.125 9.350 11.105 1.205 8 C_C19:G14_C C 19 ? C 14 ? 19 1 1 B A 20 1_555 B U 13 1_555 0.051 -0.064 0.160 4.043 7.018 0.697 9 C_A20:U13_C C 20 ? C 13 ? 20 1 1 B G 21 1_555 B C 12 1_555 0.157 0.121 -0.759 -7.442 -15.597 -6.340 10 C_G21:C12_C C 21 ? C 12 ? ? 1 1 B A 22 1_555 B U 11 1_555 1.384 0.336 -0.406 -3.520 -5.784 4.483 11 C_A22:U11_C C 22 ? C 11 ? ? ? 1 B G 23 1_555 B U 111 1_555 -1.612 -0.143 0.545 -6.082 -2.595 3.599 12 C_G23:U111_C C 23 ? C 111 ? 28 1 1 B C 24 1_555 B G 110 1_555 0.252 -0.168 0.402 7.365 -16.915 1.387 13 C_C24:G110_C C 24 ? C 110 ? 19 1 1 B G 25 1_555 B C 109 1_555 0.157 -0.150 -0.486 -10.863 -11.762 -0.841 14 C_G25:C109_C C 25 ? C 109 ? 19 1 1 B G 26 1_555 B U 108 1_555 -2.329 -0.648 -0.998 -14.309 -10.202 2.042 15 C_G26:U108_C C 26 ? C 108 ? 28 1 1 B G 27 1_555 B C 107 1_555 0.130 -0.078 0.163 -2.291 2.766 -0.825 16 C_G27:C107_C C 27 ? C 107 ? 19 1 1 B G 28 1_555 B C 106 1_555 -0.979 -0.410 0.047 0.693 -12.813 -0.817 17 C_G28:C106_C C 28 ? C 106 ? 19 1 1 B G 29 1_555 B A 105 1_555 6.920 -4.041 -0.273 -5.148 -7.476 -4.003 18 C_G29:A105_C C 29 ? C 105 ? 11 10 1 B C 32 1_555 B C 102 1_555 -3.071 -2.053 -0.603 6.521 -10.484 -1.321 19 C_C32:C102_C C 32 ? C 102 ? ? 1 1 B C 33 1_555 B G 101 1_555 -0.045 -0.142 -0.582 5.715 -0.437 0.822 20 C_C33:G101_C C 33 ? C 101 ? 19 1 1 B A 57 1_555 B U 98 1_555 -3.558 -2.274 -1.600 28.096 -28.833 -71.720 21 C_A57:U98_C C 57 ? C 98 ? 24 4 1 B G 58 1_555 B C 99 1_555 0.639 -0.124 -0.632 -3.256 8.517 -1.474 22 C_G58:C99_C C 58 ? C 99 ? 19 1 1 B G 59 1_555 B C 96 1_555 0.201 0.470 -0.163 -1.061 0.518 -6.453 23 C_G59:C96_C C 59 ? C 96 ? ? ? 1 B G 60 1_555 B C 95 1_555 -0.239 0.833 -0.471 -6.459 -15.577 10.149 24 C_G60:C95_C C 60 ? C 95 ? ? ? 1 B G 61 1_555 B U 94 1_555 -1.784 0.362 -0.398 -7.251 4.262 4.110 25 C_G61:U94_C C 61 ? C 94 ? ? ? 1 B U 62 1_555 B A 93 1_555 -0.513 -0.025 -0.189 10.554 2.707 -5.953 26 C_U62:A93_C C 62 ? C 93 ? 20 1 1 B G 63 1_555 B A 92 1_555 7.085 -4.219 0.740 38.271 9.380 -0.668 27 C_G63:A92_C C 63 ? C 92 ? ? ? 1 B G 75 1_555 B C 68 1_555 -0.217 -0.219 0.905 8.518 -8.021 -1.478 28 C_G75:C68_C C 75 ? C 68 ? 19 1 1 B G 76 1_555 B C 67 1_555 -0.474 -0.212 -0.110 -4.895 -15.739 -0.223 29 C_G76:C67_C C 76 ? C 67 ? 19 1 1 B U 77 1_555 B U 66 1_555 2.760 -1.823 0.404 6.557 -11.839 10.984 30 C_U77:U66_C C 77 ? C 66 ? 16 1 1 B A 78 1_555 B G 91 1_555 -7.452 -4.924 -0.466 -8.993 3.296 -11.439 31 C_A78:G91_C C 78 ? C 91 ? ? 10 1 B G 79 1_555 B C 90 1_555 0.078 -0.106 -0.245 -1.755 -6.656 1.602 32 C_G79:C90_C C 79 ? C 90 ? 19 1 1 B G 80 1_555 B C 89 1_555 0.208 -0.093 -0.660 -12.101 -13.195 1.559 33 C_G80:C89_C C 80 ? C 89 ? 19 1 1 B G 81 1_555 B C 88 1_555 1.847 0.076 -0.387 -6.951 6.434 2.008 34 C_G81:C88_C C 81 ? C 88 ? ? 1 1 B C 82 1_555 B G 87 1_555 -0.599 0.411 -0.515 11.305 3.261 0.832 35 C_C82:G87_C C 82 ? C 87 ? 19 1 1 B G 83 1_555 B A 86 1_555 7.233 -5.311 0.637 28.912 13.944 -20.578 36 C_G83:A86_C C 83 ? C 86 ? ? ? # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B G 1 1_555 B C 119 1_555 B C 2 1_555 B G 118 1_555 0.198 -1.053 3.179 -1.902 3.289 39.384 -1.926 -0.506 3.072 4.866 2.814 39.560 1 CC_G1C2:G118C119_CC C 1 ? C 119 ? C 2 ? C 118 ? 1 B C 2 1_555 B G 118 1_555 B G 3 1_555 B C 117 1_555 -1.307 -1.862 2.983 -4.334 25.120 34.532 -4.493 1.462 1.499 36.767 6.343 42.690 2 CC_C2G3:C117G118_CC C 2 ? C 118 ? C 3 ? C 117 ? 1 B G 3 1_555 B C 117 1_555 B C 4 1_555 B G 116 1_555 -0.492 -1.625 2.979 -2.024 -2.987 25.441 -2.860 0.568 3.174 -6.739 4.566 25.692 3 CC_G3C4:G116C117_CC C 3 ? C 117 ? C 4 ? C 116 ? 1 B C 4 1_555 B G 116 1_555 B G 5 1_555 B C 115 1_555 1.191 -2.179 3.751 1.419 7.885 34.367 -4.863 -1.738 3.232 13.125 -2.362 35.261 4 CC_C4G5:C115G116_CC C 4 ? C 116 ? C 5 ? C 115 ? 1 B G 5 1_555 B C 115 1_555 B C 6 1_555 B G 114 1_555 -0.333 -2.365 3.124 -2.031 4.415 26.970 -5.978 0.250 2.727 9.370 4.311 27.396 5 CC_G5C6:G114C115_CC C 5 ? C 115 ? C 6 ? C 114 ? 1 B C 6 1_555 B G 114 1_555 B U 7 1_555 B A 113 1_555 -0.602 -1.946 3.392 -1.831 8.809 23.234 -6.994 0.881 2.534 20.896 4.344 24.893 6 CC_C6U7:A113G114_CC C 6 ? C 114 ? C 7 ? C 113 ? 1 B C 19 1_555 B G 14 1_555 B A 20 1_555 B U 13 1_555 0.128 -1.480 3.455 0.303 18.762 32.296 -4.676 -0.163 2.285 30.710 -0.496 37.226 7 CC_C19A20:U13G14_CC C 19 ? C 14 ? C 20 ? C 13 ? 1 B A 20 1_555 B U 13 1_555 B G 21 1_555 B C 12 1_555 -0.787 -1.696 3.736 5.486 10.420 36.010 -4.033 1.960 3.001 16.326 -8.595 37.826 8 CC_A20G21:C12U13_CC C 20 ? C 13 ? C 21 ? C 12 ? 1 B G 21 1_555 B C 12 1_555 B A 22 1_555 B U 11 1_555 -0.125 -1.440 3.218 -6.968 5.616 36.890 -2.903 -0.661 2.950 8.719 10.817 37.924 9 CC_G21A22:U11C12_CC C 21 ? C 12 ? C 22 ? C 11 ? 1 B A 22 1_555 B U 11 1_555 B G 23 1_555 B U 111 1_555 2.505 -0.939 2.926 0.849 1.077 41.117 -1.440 -3.482 2.950 1.533 -1.208 41.139 10 CC_A22G23:U111U11_CC C 22 ? C 11 ? C 23 ? C 111 ? 1 B G 23 1_555 B U 111 1_555 B C 24 1_555 B G 110 1_555 -0.189 -1.256 2.999 0.596 5.243 37.471 -2.538 0.360 2.801 8.111 -0.922 37.828 11 CC_G23C24:G110U111_CC C 23 ? C 111 ? C 24 ? C 110 ? 1 B C 24 1_555 B G 110 1_555 B G 25 1_555 B C 109 1_555 0.661 -2.220 3.763 6.765 13.456 31.735 -5.794 -0.038 2.711 23.053 -11.590 35.044 12 CC_C24G25:C109G110_CC C 24 ? C 110 ? C 25 ? C 109 ? 1 B G 25 1_555 B C 109 1_555 B G 26 1_555 B U 108 1_555 -0.430 -1.725 3.502 -3.576 6.046 21.102 -6.777 -0.246 2.931 15.950 9.432 22.228 13 CC_G25G26:U108C109_CC C 25 ? C 109 ? C 26 ? C 108 ? 1 B G 26 1_555 B U 108 1_555 B G 27 1_555 B C 107 1_555 -0.910 -1.571 2.984 -10.643 -0.866 35.840 -2.343 0.074 3.153 -1.371 16.840 37.347 14 CC_G26G27:C107U108_CC C 26 ? C 108 ? C 27 ? C 107 ? 1 B G 27 1_555 B C 107 1_555 B G 28 1_555 B C 106 1_555 0.287 -2.169 3.371 3.579 -3.233 25.704 -3.849 0.415 3.617 -7.186 -7.957 26.145 15 CC_G27G28:C106C107_CC C 27 ? C 107 ? C 28 ? C 106 ? 1 B G 28 1_555 B C 106 1_555 B G 29 1_555 B A 105 1_555 -0.380 -0.763 3.714 3.448 7.269 66.506 -1.012 0.496 3.602 6.603 -3.132 66.935 16 CC_G28G29:A105C106_CC C 28 ? C 106 ? C 29 ? C 105 ? 1 B C 32 1_555 B C 102 1_555 B C 33 1_555 B G 101 1_555 0.388 -1.228 3.535 -1.924 11.262 45.635 -2.505 -0.651 3.146 14.258 2.435 46.969 17 CC_C32C33:G101C102_CC C 32 ? C 102 ? C 33 ? C 101 ? 1 B A 57 1_555 B U 98 1_555 B G 58 1_555 B C 99 1_555 1.450 -4.063 4.877 -12.870 5.705 45.295 -5.695 -3.235 3.842 7.205 16.253 47.322 18 CC_A57G58:C99U98_CC C 57 ? C 98 ? C 58 ? C 99 ? 1 B G 58 1_555 B C 99 1_555 B G 59 1_555 B C 96 1_555 2.057 -1.811 3.119 -2.482 9.077 49.606 -2.702 -2.572 2.671 10.707 2.928 50.435 19 CC_G58G59:C96C99_CC C 58 ? C 99 ? C 59 ? C 96 ? 1 B G 59 1_555 B C 96 1_555 B G 60 1_555 B C 95 1_555 1.057 -2.236 3.774 2.877 3.338 26.515 -5.780 -1.438 3.563 7.215 -6.217 26.872 20 CC_G59G60:C95C96_CC C 59 ? C 96 ? C 60 ? C 95 ? 1 B G 60 1_555 B C 95 1_555 B G 61 1_555 B U 94 1_555 -0.703 -2.033 3.442 -7.115 0.138 22.941 -4.936 -0.800 3.486 0.336 17.360 24.005 21 CC_G60G61:U94C95_CC C 60 ? C 95 ? C 61 ? C 94 ? 1 B G 61 1_555 B U 94 1_555 B U 62 1_555 B A 93 1_555 -1.538 -1.888 3.253 -1.874 -0.712 28.177 -3.700 2.708 3.392 -1.461 3.842 28.247 22 CC_G61U62:A93U94_CC C 61 ? C 94 ? C 62 ? C 93 ? 1 B U 62 1_555 B A 93 1_555 B G 63 1_555 B A 92 1_555 -0.182 -0.618 2.794 -0.478 13.521 55.364 -1.276 0.169 2.592 14.314 0.506 56.866 23 CC_U62G63:A92A93_CC C 62 ? C 93 ? C 63 ? C 92 ? 1 B G 75 1_555 B C 68 1_555 B G 76 1_555 B C 67 1_555 0.541 -1.881 3.732 3.463 5.607 29.287 -4.901 -0.263 3.362 10.915 -6.742 30.003 24 CC_G75G76:C67C68_CC C 75 ? C 68 ? C 76 ? C 67 ? 1 B G 76 1_555 B C 67 1_555 B U 77 1_555 B U 66 1_555 0.147 -1.395 3.123 -8.675 -0.302 45.146 -1.762 -0.902 3.055 -0.388 11.177 45.930 25 CC_G76U77:U66C67_CC C 76 ? C 67 ? C 77 ? C 66 ? 1 B U 77 1_555 B U 66 1_555 B A 78 1_555 B G 91 1_555 0.856 -0.255 3.715 -2.227 2.653 19.754 -2.106 -3.611 3.533 7.658 6.429 20.052 26 CC_U77A78:G91U66_CC C 77 ? C 66 ? C 78 ? C 91 ? 1 B A 78 1_555 B G 91 1_555 B G 79 1_555 B C 90 1_555 0.498 -1.017 3.264 -1.307 3.381 63.004 -1.121 -0.534 3.202 3.233 1.249 63.098 27 CC_A78G79:C90G91_CC C 78 ? C 91 ? C 79 ? C 90 ? 1 B G 79 1_555 B C 90 1_555 B G 80 1_555 B C 89 1_555 0.414 -2.247 3.786 3.508 4.939 31.128 -5.125 -0.039 3.423 9.095 -6.461 31.697 28 CC_G79G80:C89C90_CC C 79 ? C 90 ? C 80 ? C 89 ? 1 B G 80 1_555 B C 89 1_555 B G 81 1_555 B C 88 1_555 -1.595 -1.686 3.152 -6.877 4.535 36.823 -3.184 1.598 3.166 7.071 10.723 37.702 29 CC_G80G81:C88C89_CC C 80 ? C 89 ? C 81 ? C 88 ? 1 B G 81 1_555 B C 88 1_555 B C 82 1_555 B G 87 1_555 0.131 -2.069 3.060 2.307 -1.951 19.307 -5.172 0.706 3.244 -5.772 -6.826 19.540 30 CC_G81C82:G87C88_CC C 81 ? C 88 ? C 82 ? C 87 ? 1 B C 82 1_555 B G 87 1_555 B G 83 1_555 B A 86 1_555 -1.688 -1.142 2.954 -5.000 9.775 61.353 -1.507 1.428 2.876 9.497 4.858 62.233 31 CC_C82G83:A86G87_CC C 82 ? C 87 ? C 83 ? C 86 ? # _atom_sites.entry_id 4W92 _atom_sites.fract_transf_matrix[1][1] 0.016589 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012039 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004281 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C K MG N O P SE # loop_