HEADER RNA BINDING PROTEIN/RNA 26-AUG-14 4W92 TITLE CRYSTAL STRUCTURE OF BACILLUS SUBTILIS CYCLIC-DI-AMP RIBOSWITCH YDAO COMPND MOL_ID: 1; COMPND 2 MOLECULE: U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A; COMPND 3 CHAIN: B; COMPND 4 FRAGMENT: UNP RESIDUES 6-96; COMPND 5 SYNONYM: U1A; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: C-DI-AMP RIBSOSWITCH; COMPND 10 CHAIN: C; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SNRPA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PIDTBLUE; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; SOURCE 12 ORGANISM_TAXID: 1423; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 15 EXPRESSION_SYSTEM_STRAIN: B834(DE3) KEYWDS RIBOSWITCH, CYCLIC-DI-AMP, PROTEIN-RNA COMPLEX, RNA BINDING PROTEIN- KEYWDS 2 RNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR C.P.JONES,A.R.FERRE-D'AMARE REVDAT 6 27-DEC-23 4W92 1 COMPND REMARK HETNAM REVDAT 5 22-NOV-17 4W92 1 SOURCE JRNL REMARK REVDAT 4 25-FEB-15 4W92 1 REMARK REVDAT 3 03-DEC-14 4W92 1 JRNL REVDAT 2 29-OCT-14 4W92 1 JRNL REVDAT 1 22-OCT-14 4W92 0 JRNL AUTH C.P.JONES,A.R.FERRE-D'AMARE JRNL TITL CRYSTAL STRUCTURE OF A C-DI-AMP RIBOSWITCH REVEALS AN JRNL TITL 2 INTERNALLY PSEUDO-DIMERIC RNA. JRNL REF EMBO J. V. 33 2692 2014 JRNL REFN ESSN 1460-2075 JRNL PMID 25271255 JRNL DOI 10.15252/EMBJ.201489209 REMARK 2 REMARK 2 RESOLUTION. 3.21 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.9_1692) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : MLHL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.21 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.79 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 8069 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.255 REMARK 3 R VALUE (WORKING SET) : 0.252 REMARK 3 FREE R VALUE : 0.289 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.930 REMARK 3 FREE R VALUE TEST SET COUNT : 1807 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.7927 - 7.5378 0.99 1281 132 0.2494 0.2955 REMARK 3 2 7.5378 - 5.9865 1.00 1279 146 0.2450 0.2579 REMARK 3 3 5.9865 - 5.2307 1.00 1288 149 0.2146 0.2421 REMARK 3 4 5.2307 - 4.7529 1.00 1296 139 0.2089 0.2756 REMARK 3 5 4.7529 - 4.4125 1.00 1275 139 0.2229 0.2480 REMARK 3 6 4.4125 - 4.1525 1.00 1274 142 0.2359 0.2727 REMARK 3 7 4.1525 - 3.9446 1.00 1279 139 0.2368 0.2524 REMARK 3 8 3.9446 - 3.7730 1.00 1282 140 0.2525 0.3328 REMARK 3 9 3.7730 - 3.6278 1.00 1321 145 0.2824 0.3061 REMARK 3 10 3.6278 - 3.5026 1.00 1253 139 0.2982 0.3305 REMARK 3 11 3.5026 - 3.3931 0.99 1269 144 0.3149 0.3681 REMARK 3 12 3.3931 - 3.2962 0.97 1278 143 0.3357 0.3710 REMARK 3 13 3.2962 - 3.2094 0.81 1008 110 0.3684 0.4204 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.430 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.010 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 86.47 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 100.4 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 3044 REMARK 3 ANGLE : 0.728 4599 REMARK 3 CHIRALITY : 0.027 596 REMARK 3 PLANARITY : 0.002 215 REMARK 3 DIHEDRAL : 14.753 1399 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 14 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 6 THROUGH 10 ) REMARK 3 ORIGIN FOR THE GROUP (A): 40.6191-153.6712 761.2609 REMARK 3 T TENSOR REMARK 3 T11: 1.6375 T22: 1.0133 REMARK 3 T33: 0.3209 T12: -0.0885 REMARK 3 T13: -0.1146 T23: 0.1989 REMARK 3 L TENSOR REMARK 3 L11: 0.3524 L22: 0.0350 REMARK 3 L33: 0.0388 L12: 0.0615 REMARK 3 L13: 0.1097 L23: 0.0064 REMARK 3 S TENSOR REMARK 3 S11: 0.2928 S12: 0.0493 S13: -0.0660 REMARK 3 S21: 0.2193 S22: 0.0371 S23: 0.0229 REMARK 3 S31: 0.0478 S32: -0.0953 S33: 0.1558 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 11 THROUGH 15 ) REMARK 3 ORIGIN FOR THE GROUP (A): 42.0671-156.7037 751.5290 REMARK 3 T TENSOR REMARK 3 T11: 0.9646 T22: 1.1274 REMARK 3 T33: 0.3918 T12: -0.2246 REMARK 3 T13: -0.2349 T23: -0.2002 REMARK 3 L TENSOR REMARK 3 L11: 0.1196 L22: 0.2114 REMARK 3 L33: 0.2861 L12: 0.1480 REMARK 3 L13: -0.0237 L23: 0.0525 REMARK 3 S TENSOR REMARK 3 S11: 0.1131 S12: 0.1188 S13: -0.1772 REMARK 3 S21: 0.2978 S22: -0.0073 S23: -0.1534 REMARK 3 S31: -0.1006 S32: -0.0640 S33: -0.0018 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 16 THROUGH 22 ) REMARK 3 ORIGIN FOR THE GROUP (A): 42.3941-160.2353 738.1968 REMARK 3 T TENSOR REMARK 3 T11: 0.5663 T22: 1.2802 REMARK 3 T33: 1.4787 T12: 0.0636 REMARK 3 T13: 0.0371 T23: 0.1194 REMARK 3 L TENSOR REMARK 3 L11: 0.0939 L22: 0.0616 REMARK 3 L33: 0.4392 L12: 0.0255 REMARK 3 L13: 0.1999 L23: 0.1015 REMARK 3 S TENSOR REMARK 3 S11: -0.5817 S12: -0.4298 S13: -0.8025 REMARK 3 S21: -0.2099 S22: -0.1138 S23: -0.0995 REMARK 3 S31: -0.2226 S32: 0.2676 S33: -0.0328 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 23 THROUGH 37 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.7124-156.4511 744.7798 REMARK 3 T TENSOR REMARK 3 T11: 0.5328 T22: 0.5896 REMARK 3 T33: 0.9003 T12: -0.0050 REMARK 3 T13: -0.0754 T23: -0.1597 REMARK 3 L TENSOR REMARK 3 L11: 0.1010 L22: 0.1083 REMARK 3 L33: 0.0574 L12: -0.1073 REMARK 3 L13: 0.0233 L23: -0.0284 REMARK 3 S TENSOR REMARK 3 S11: -0.3051 S12: 0.1200 S13: 0.5288 REMARK 3 S21: -0.0649 S22: -0.3469 S23: -0.4103 REMARK 3 S31: 0.5209 S32: -0.2137 S33: -0.0008 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 38 THROUGH 45 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.2120-149.7389 748.5748 REMARK 3 T TENSOR REMARK 3 T11: 0.8237 T22: 0.7703 REMARK 3 T33: 0.8588 T12: -0.1636 REMARK 3 T13: 0.1291 T23: -0.1799 REMARK 3 L TENSOR REMARK 3 L11: 0.0116 L22: 0.0045 REMARK 3 L33: 0.0283 L12: 0.0112 REMARK 3 L13: -0.0049 L23: -0.0117 REMARK 3 S TENSOR REMARK 3 S11: -0.3122 S12: -0.0262 S13: 0.4368 REMARK 3 S21: -0.0382 S22: 0.4337 S23: 0.2939 REMARK 3 S31: -0.2574 S32: -0.1356 S33: 0.0000 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 46 THROUGH 54 ) REMARK 3 ORIGIN FOR THE GROUP (A): 47.7350-153.6299 741.4880 REMARK 3 T TENSOR REMARK 3 T11: 0.2376 T22: 0.7090 REMARK 3 T33: 2.1993 T12: -0.1356 REMARK 3 T13: -0.5729 T23: -0.1381 REMARK 3 L TENSOR REMARK 3 L11: -0.0007 L22: -0.0031 REMARK 3 L33: 0.0199 L12: 0.0020 REMARK 3 L13: 0.0028 L23: -0.0035 REMARK 3 S TENSOR REMARK 3 S11: 0.1436 S12: -0.4390 S13: 0.2058 REMARK 3 S21: 0.1575 S22: -0.1514 S23: -0.2241 REMARK 3 S31: -0.0865 S32: 0.2078 S33: 0.1467 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 55 THROUGH 61 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.1333-151.6400 752.7831 REMARK 3 T TENSOR REMARK 3 T11: 0.7690 T22: 0.4765 REMARK 3 T33: 0.2714 T12: -0.1652 REMARK 3 T13: -0.0529 T23: -0.4183 REMARK 3 L TENSOR REMARK 3 L11: 0.0007 L22: 0.7641 REMARK 3 L33: 0.3372 L12: -0.0232 REMARK 3 L13: -0.0162 L23: 0.5086 REMARK 3 S TENSOR REMARK 3 S11: 0.0080 S12: 0.1327 S13: -0.0862 REMARK 3 S21: -0.3612 S22: -0.0129 S23: -0.1121 REMARK 3 S31: -0.0423 S32: 0.0789 S33: -0.4890 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 62 THROUGH 72 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.9802-159.9406 757.4525 REMARK 3 T TENSOR REMARK 3 T11: 0.8561 T22: 0.9745 REMARK 3 T33: 0.1394 T12: -0.0630 REMARK 3 T13: -0.0446 T23: -0.0043 REMARK 3 L TENSOR REMARK 3 L11: 0.1593 L22: 0.4666 REMARK 3 L33: 0.1801 L12: -0.1483 REMARK 3 L13: 0.1515 L23: -0.0435 REMARK 3 S TENSOR REMARK 3 S11: 0.1749 S12: 0.0652 S13: -0.1714 REMARK 3 S21: -0.0874 S22: -0.0178 S23: 0.0276 REMARK 3 S31: -0.0721 S32: -0.0468 S33: 0.6208 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 73 THROUGH 82 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.6691-166.1625 745.1451 REMARK 3 T TENSOR REMARK 3 T11: 0.6225 T22: 1.1105 REMARK 3 T33: 1.5206 T12: -0.0682 REMARK 3 T13: -0.1305 T23: -0.0184 REMARK 3 L TENSOR REMARK 3 L11: 0.1718 L22: 2.0975 REMARK 3 L33: 0.8872 L12: -0.5292 REMARK 3 L13: 0.1680 L23: -1.0877 REMARK 3 S TENSOR REMARK 3 S11: -1.1193 S12: 0.4721 S13: -0.0510 REMARK 3 S21: 1.0243 S22: 0.1184 S23: -0.7037 REMARK 3 S31: -0.2438 S32: 0.2474 S33: -0.0195 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 83 THROUGH 91 ) REMARK 3 ORIGIN FOR THE GROUP (A): 42.5954-155.2320 755.9720 REMARK 3 T TENSOR REMARK 3 T11: 0.9658 T22: 1.1078 REMARK 3 T33: 0.5488 T12: -0.0982 REMARK 3 T13: -0.2425 T23: -0.0407 REMARK 3 L TENSOR REMARK 3 L11: 0.1661 L22: 1.5432 REMARK 3 L33: 0.1336 L12: 0.3853 REMARK 3 L13: 0.1095 L23: 0.4670 REMARK 3 S TENSOR REMARK 3 S11: 0.2075 S12: -0.5565 S13: 0.0763 REMARK 3 S21: 0.5088 S22: -0.0969 S23: 0.0076 REMARK 3 S31: -0.2034 S32: 0.4775 S33: 0.0698 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 92 THROUGH 96 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.6864-141.0731 756.5213 REMARK 3 T TENSOR REMARK 3 T11: 1.1457 T22: 1.3697 REMARK 3 T33: 0.6429 T12: -0.1441 REMARK 3 T13: -0.6077 T23: 0.4516 REMARK 3 L TENSOR REMARK 3 L11: 0.0422 L22: 0.1865 REMARK 3 L33: 0.3780 L12: -0.0194 REMARK 3 L13: 0.1188 L23: 0.0383 REMARK 3 S TENSOR REMARK 3 S11: -0.0115 S12: -0.0775 S13: 0.0039 REMARK 3 S21: 0.0176 S22: 0.0029 S23: 0.0247 REMARK 3 S31: -0.0162 S32: -0.0734 S33: 0.0091 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 1 THROUGH 65 ) REMARK 3 ORIGIN FOR THE GROUP (A): 65.6915-146.0327 723.8217 REMARK 3 T TENSOR REMARK 3 T11: 0.8264 T22: 1.0194 REMARK 3 T33: 1.4597 T12: -0.0866 REMARK 3 T13: -0.3798 T23: 0.1734 REMARK 3 L TENSOR REMARK 3 L11: 2.8215 L22: 1.8323 REMARK 3 L33: 0.9908 L12: 1.1766 REMARK 3 L13: -0.9273 L23: 0.6628 REMARK 3 S TENSOR REMARK 3 S11: -0.2537 S12: 0.3541 S13: 0.3026 REMARK 3 S21: -0.4686 S22: 0.1594 S23: 0.4643 REMARK 3 S31: -0.1921 S32: -0.5839 S33: -0.0056 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 66 THROUGH 82 ) REMARK 3 ORIGIN FOR THE GROUP (A): 83.7583-146.7647 738.8935 REMARK 3 T TENSOR REMARK 3 T11: 0.9320 T22: 1.2013 REMARK 3 T33: 1.5487 T12: 0.0381 REMARK 3 T13: 0.1816 T23: -0.1486 REMARK 3 L TENSOR REMARK 3 L11: 0.2013 L22: 0.2460 REMARK 3 L33: 0.2679 L12: -0.1449 REMARK 3 L13: 0.2347 L23: -0.0717 REMARK 3 S TENSOR REMARK 3 S11: -0.5088 S12: -0.9772 S13: 1.3338 REMARK 3 S21: 0.5878 S22: 0.0812 S23: 0.9739 REMARK 3 S31: -0.1022 S32: -0.0595 S33: 0.0001 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 83 THROUGH 119 ) REMARK 3 ORIGIN FOR THE GROUP (A): 74.2971-142.9455 724.4702 REMARK 3 T TENSOR REMARK 3 T11: 0.7796 T22: 0.9828 REMARK 3 T33: 1.3295 T12: -0.1147 REMARK 3 T13: -0.1079 T23: -0.0902 REMARK 3 L TENSOR REMARK 3 L11: 0.1148 L22: 1.8913 REMARK 3 L33: 1.4443 L12: -0.3513 REMARK 3 L13: -0.1558 L23: -0.4107 REMARK 3 S TENSOR REMARK 3 S11: -0.2158 S12: 0.0550 S13: 0.5770 REMARK 3 S21: -0.2491 S22: 0.1885 S23: 0.7734 REMARK 3 S31: -0.0990 S32: -0.4259 S33: -0.0001 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4W92 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-AUG-14. REMARK 100 THE DEPOSITION ID IS D_1000203412. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-FEB-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL, SI(111) LIQUID REMARK 200 N2 COOLED REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9964 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.200 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 12.20 REMARK 200 R MERGE (I) : 0.16600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.26 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.1 REMARK 200 DATA REDUNDANCY IN SHELL : 6.80 REMARK 200 R MERGE FOR SHELL (I) : 0.96200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.78 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.98 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350, PH 5.2, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 30.14050 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 41.53100 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 116.78650 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 30.14050 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 41.53100 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 116.78650 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 30.14050 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 41.53100 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 116.78650 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 30.14050 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 41.53100 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 116.78650 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2410 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21730 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -58.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS B 88 REMARK 465 A C 15 REMARK 465 A C 16 REMARK 465 A C 17 REMARK 465 U C 18 REMARK 465 C C 43 REMARK 465 G C 44 REMARK 465 G C 45 REMARK 465 G C 46 REMARK 465 U C 47 REMARK 465 U C 48 REMARK 465 U C 49 REMARK 465 U C 50 REMARK 465 U C 51 REMARK 465 C C 52 REMARK 465 C C 53 REMARK 465 C C 54 REMARK 465 G C 55 REMARK 465 U C 56 REMARK 465 U C 70 REMARK 465 U C 71 REMARK 465 U C 72 REMARK 465 U C 73 REMARK 465 A C 74 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG B 7 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 20 CD CE NZ REMARK 470 LYS B 23 NZ REMARK 470 ASP B 24 CG OD1 OD2 REMARK 470 LYS B 28 CG CD CE NZ REMARK 470 GLN B 39 CG CD OE1 NE2 REMARK 470 LEU B 41 CG CD1 CD2 REMARK 470 LEU B 49 CG CD1 CD2 REMARK 470 LYS B 50 CG CD CE NZ REMARK 470 MSE B 51 CE REMARK 470 ARG B 52 NE CZ NH1 NH2 REMARK 470 LYS B 60 CG CD CE NZ REMARK 470 GLU B 61 CG CD OE1 OE2 REMARK 470 ARG B 70 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 80 CG CD CE NZ REMARK 470 ARG B 83 CZ NH1 NH2 REMARK 470 GLN B 85 CG CD OE1 NE2 REMARK 470 ASP B 90 CG OD1 OD2 REMARK 470 ILE B 93 CG1 CG2 CD1 REMARK 470 ILE B 94 CG1 CG2 CD1 REMARK 470 LYS B 96 CG CD CE NZ REMARK 470 C C 42 O5' C5' C4' O4' C3' O3' C2' REMARK 470 C C 42 O2' C1' N1 C2 O2 N3 C4 REMARK 470 C C 42 N4 C5 C6 REMARK 470 A C 57 OP1 OP2 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 204 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 U C 7 OP1 REMARK 620 2 C C 82 OP1 81.2 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 G C 27 OP1 REMARK 620 2 U C 62 OP1 78.7 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 G C 29 OP2 REMARK 620 2 G C 101 OP1 71.9 REMARK 620 3 C C 102 OP2 145.6 80.3 REMARK 620 4 U C 103 O4 102.2 111.4 106.7 REMARK 620 N 1 2 3 DBREF 4W92 B 6 96 UNP P09012 SNRPA_HUMAN 6 96 DBREF 4W92 C 1 119 PDB 4W92 4W92 1 119 SEQADV 4W92 HIS B 31 UNP P09012 TYR 31 ENGINEERED MUTATION SEQADV 4W92 ARG B 36 UNP P09012 GLN 36 ENGINEERED MUTATION SEQRES 1 B 91 THR ARG PRO ASN HIS THR ILE TYR ILE ASN ASN LEU ASN SEQRES 2 B 91 GLU LYS ILE LYS LYS ASP GLU LEU LYS LYS SER LEU HIS SEQRES 3 B 91 ALA ILE PHE SER ARG PHE GLY GLN ILE LEU ASP ILE LEU SEQRES 4 B 91 VAL SER ARG SER LEU LYS MSE ARG GLY GLN ALA PHE VAL SEQRES 5 B 91 ILE PHE LYS GLU VAL SER SER ALA THR ASN ALA LEU ARG SEQRES 6 B 91 SER MSE GLN GLY PHE PRO PHE TYR ASP LYS PRO MSE ARG SEQRES 7 B 91 ILE GLN TYR ALA LYS THR ASP SER ASP ILE ILE ALA LYS SEQRES 1 C 119 G C G C G C U U A A U C U SEQRES 2 C 119 G A A A U C A G A G C G G SEQRES 3 C 119 G G G A C C C A U U G C A SEQRES 4 C 119 C U C C G G G U U U U U C SEQRES 5 C 119 C C G U A G G G G U G A A SEQRES 6 C 119 U C C U U U U U A G G U A SEQRES 7 C 119 G G G C G A A A G C C C G SEQRES 8 C 119 A A U C C G U C A G C U A SEQRES 9 C 119 A C C U C G U A A G C G C SEQRES 10 C 119 G C MODRES 4W92 MSE B 51 MET MODIFIED RESIDUE MODRES 4W92 MSE B 72 MET MODIFIED RESIDUE MODRES 4W92 MSE B 82 MET MODIFIED RESIDUE HET MSE B 51 7 HET MSE B 72 8 HET MSE B 82 8 HET MG C 201 1 HET MG C 202 1 HET MG C 203 1 HET MG C 204 1 HET MG C 205 1 HET K C 206 1 HET EDO C 207 4 HET 2BA C 208 44 HET 2BA C 209 44 HETNAM MSE SELENOMETHIONINE HETNAM MG MAGNESIUM ION HETNAM K POTASSIUM ION HETNAM EDO 1,2-ETHANEDIOL HETNAM 2BA (2R,3R,3AS,5R,7AR,9R,10R,10AS,12R,14AR)-2,9-BIS(6- HETNAM 2 2BA AMINO-9H-PURIN-9-YL)OCTAHYDRO-2H,7H-DIFURO[3,2-D:3', HETNAM 3 2BA 2'-J][1,3,7,9,2,8 ]TETRAOXADIPHOSPHACYCLODODECINE-3,5, HETNAM 4 2BA 10,12-TETROL 5,12-DIOXIDE HETSYN EDO ETHYLENE GLYCOL HETSYN 2BA BIS-(3',5')-CYCLIC-DIMERIC-ADENOSINE-MONOPHOSPHATE FORMUL 1 MSE 3(C5 H11 N O2 SE) FORMUL 3 MG 5(MG 2+) FORMUL 8 K K 1+ FORMUL 9 EDO C2 H6 O2 FORMUL 10 2BA 2(C20 H24 N10 O12 P2) HELIX 1 AA1 LYS B 22 SER B 35 1 14 HELIX 2 AA2 ARG B 36 GLY B 38 5 3 HELIX 3 AA3 GLU B 61 GLN B 73 1 13 HELIX 4 AA4 SER B 91 LYS B 96 1 6 SHEET 1 AA1 4 ILE B 40 VAL B 45 0 SHEET 2 AA1 4 GLN B 54 PHE B 59 -1 O ILE B 58 N ASP B 42 SHEET 3 AA1 4 THR B 11 ASN B 15 -1 N ILE B 14 O ALA B 55 SHEET 4 AA1 4 ARG B 83 TYR B 86 -1 O GLN B 85 N TYR B 13 SHEET 1 AA2 2 PRO B 76 PHE B 77 0 SHEET 2 AA2 2 LYS B 80 PRO B 81 -1 O LYS B 80 N PHE B 77 LINK C LYS B 50 N MSE B 51 1555 1555 1.33 LINK C MSE B 51 N ARG B 52 1555 1555 1.33 LINK C SER B 71 N MSE B 72 1555 1555 1.33 LINK C MSE B 72 N GLN B 73 1555 1555 1.33 LINK C PRO B 81 N MSE B 82 1555 1555 1.33 LINK C MSE B 82 N ARG B 83 1555 1555 1.33 LINK OP1 U C 7 MG MG C 204 1555 1555 2.02 LINK OP1 G C 27 MG MG C 201 1555 1555 2.33 LINK OP2 G C 29 MG MG C 202 1555 1555 2.49 LINK OP1 U C 62 MG MG C 201 1555 1555 2.12 LINK OP1 C C 82 MG MG C 204 1555 1555 2.41 LINK OP1 G C 101 MG MG C 202 1555 1555 2.16 LINK OP2 G C 101 MG MG C 205 1555 1555 2.54 LINK OP2 C C 102 MG MG C 202 1555 1555 2.03 LINK O4 U C 103 MG MG C 202 1555 1555 2.10 CRYST1 60.281 83.062 233.573 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016589 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012039 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004281 0.00000