HEADER IMMUNE SYSTEM 05-SEP-14 4WCO TITLE CRYSTAL STRUCTURE OF EXTRACELLULAR DOMAIN OF HUMAN LECTIN-LIKE TITLE 2 TRANSCRIPT 1 (LLT1), THE LIGAND FOR NATURAL KILLER RECEPTOR-P1A COMPND MOL_ID: 1; COMPND 2 MOLECULE: C-TYPE LECTIN DOMAIN FAMILY 2 MEMBER D; COMPND 3 CHAIN: A, B, C; COMPND 4 FRAGMENT: UNP RESIDUES 71-191; COMPND 5 SYNONYM: LECTIN-LIKE NK CELL RECEPTOR, LECTIN-LIKE TRANSCRIPT 1, LLT- COMPND 6 1, OSTEOCLAST INHIBITORY LECTIN; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CLEC2D, CLAX, LLT1, OCIL; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET22 KEYWDS RECEPTOR, ECTODOMAIN, IMMUNOLOGY, LECTIN, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR S.KITA,H.MATSUBARA,Y.KASAI,T.TAMAOKI,Y.OKABE,H.FUKUHARA, AUTHOR 2 J.KAMISHIKIRYO,T.OSE,K.KUROKI,K.MAENAKA REVDAT 3 08-NOV-23 4WCO 1 REMARK LINK REVDAT 2 29-JAN-20 4WCO 1 SOURCE KEYWDS JRNL REMARK REVDAT 1 24-JUN-15 4WCO 0 JRNL AUTH S.KITA,H.MATSUBARA,Y.KASAI,T.TAMAOKI,Y.OKABE,H.FUKUHARA, JRNL AUTH 2 J.KAMISHIKIRYO,E.KRAYUKHINA,S.UCHIYAMA,T.OSE,K.KUROKI, JRNL AUTH 3 K.MAENAKA JRNL TITL CRYSTAL STRUCTURE OF EXTRACELLULAR DOMAIN OF HUMAN JRNL TITL 2 LECTIN-LIKE TRANSCRIPT 1 (LLT1), THE LIGAND FOR NATURAL JRNL TITL 3 KILLER RECEPTOR-P1A JRNL REF EUR.J.IMMUNOL. V. 45 1605 2015 JRNL REFN ISSN 0014-2980 JRNL PMID 25826155 JRNL DOI 10.1002/EJI.201545509 REMARK 2 REMARK 2 RESOLUTION. 2.46 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.9_1692) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.46 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.65 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 14127 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.220 REMARK 3 R VALUE (WORKING SET) : 0.218 REMARK 3 FREE R VALUE : 0.257 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 708 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.6540 - 4.2021 1.00 2814 148 0.1943 0.2349 REMARK 3 2 4.2021 - 3.3360 1.00 2681 136 0.1950 0.2422 REMARK 3 3 3.3360 - 2.9145 1.00 2663 146 0.2429 0.2802 REMARK 3 4 2.9145 - 2.6481 1.00 2619 145 0.2622 0.2726 REMARK 3 5 2.6481 - 2.4583 1.00 2642 133 0.2849 0.3252 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.280 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.040 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 2937 REMARK 3 ANGLE : 0.776 3954 REMARK 3 CHIRALITY : 0.033 377 REMARK 3 PLANARITY : 0.003 511 REMARK 3 DIHEDRAL : 13.415 1040 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 71 THROUGH 95 ) REMARK 3 ORIGIN FOR THE GROUP (A): -34.8666 25.8253 26.2465 REMARK 3 T TENSOR REMARK 3 T11: 0.2920 T22: 0.3136 REMARK 3 T33: 0.3464 T12: -0.0385 REMARK 3 T13: 0.0300 T23: -0.0595 REMARK 3 L TENSOR REMARK 3 L11: 4.4017 L22: 8.2339 REMARK 3 L33: 3.5942 L12: 2.4150 REMARK 3 L13: -1.1292 L23: 2.0356 REMARK 3 S TENSOR REMARK 3 S11: 0.0774 S12: -0.2499 S13: -0.0821 REMARK 3 S21: 0.8806 S22: -0.4143 S23: 0.5001 REMARK 3 S31: -0.0347 S32: -0.3544 S33: 0.2926 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 96 THROUGH 106 ) REMARK 3 ORIGIN FOR THE GROUP (A): -33.8757 38.1898 31.2631 REMARK 3 T TENSOR REMARK 3 T11: 0.5701 T22: 0.3678 REMARK 3 T33: 0.8157 T12: -0.1030 REMARK 3 T13: 0.2622 T23: -0.2098 REMARK 3 L TENSOR REMARK 3 L11: 5.2851 L22: 5.0539 REMARK 3 L33: 3.0637 L12: 4.2446 REMARK 3 L13: -0.8033 L23: -2.8510 REMARK 3 S TENSOR REMARK 3 S11: 0.3255 S12: -0.1392 S13: 0.7439 REMARK 3 S21: 0.3958 S22: 0.0874 S23: 1.3613 REMARK 3 S31: -1.0337 S32: -0.2098 S33: -0.2347 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 107 THROUGH 125 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.0433 24.0614 28.2206 REMARK 3 T TENSOR REMARK 3 T11: 0.4707 T22: 0.3187 REMARK 3 T33: 0.3071 T12: -0.0299 REMARK 3 T13: 0.0133 T23: -0.0344 REMARK 3 L TENSOR REMARK 3 L11: 5.2522 L22: 7.6427 REMARK 3 L33: 1.7101 L12: -1.5373 REMARK 3 L13: -2.2138 L23: 1.9831 REMARK 3 S TENSOR REMARK 3 S11: -0.3573 S12: -0.1869 S13: -0.1671 REMARK 3 S21: 1.0221 S22: 0.1532 S23: 0.0561 REMARK 3 S31: 0.8031 S32: -0.0060 S33: 0.2520 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 126 THROUGH 155 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.1222 32.4710 33.9442 REMARK 3 T TENSOR REMARK 3 T11: 0.5776 T22: 0.3766 REMARK 3 T33: 0.2891 T12: -0.1843 REMARK 3 T13: 0.0593 T23: 0.0338 REMARK 3 L TENSOR REMARK 3 L11: 4.2697 L22: 1.8647 REMARK 3 L33: 4.1644 L12: 0.0857 REMARK 3 L13: 4.0127 L23: 0.8228 REMARK 3 S TENSOR REMARK 3 S11: 0.2176 S12: -0.3519 S13: 0.0199 REMARK 3 S21: 0.4713 S22: -0.1692 S23: 0.0254 REMARK 3 S31: -0.0747 S32: 0.0439 S33: -0.1461 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 156 THROUGH 187 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.6687 35.3931 26.5997 REMARK 3 T TENSOR REMARK 3 T11: 0.4269 T22: 0.3941 REMARK 3 T33: 0.2221 T12: -0.1201 REMARK 3 T13: 0.0483 T23: 0.0072 REMARK 3 L TENSOR REMARK 3 L11: 6.4861 L22: 6.5964 REMARK 3 L33: 3.0123 L12: 1.0010 REMARK 3 L13: 2.9493 L23: 0.5068 REMARK 3 S TENSOR REMARK 3 S11: 0.1478 S12: 0.3769 S13: 0.1331 REMARK 3 S21: 0.5979 S22: -0.1787 S23: -0.0684 REMARK 3 S31: -0.3727 S32: 0.5570 S33: -0.0276 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 71 THROUGH 135 ) REMARK 3 ORIGIN FOR THE GROUP (A): -35.4782 13.1408 13.4316 REMARK 3 T TENSOR REMARK 3 T11: 0.1974 T22: 0.2349 REMARK 3 T33: 0.2997 T12: 0.0007 REMARK 3 T13: 0.0100 T23: 0.0004 REMARK 3 L TENSOR REMARK 3 L11: 1.9209 L22: 4.4866 REMARK 3 L33: 5.4642 L12: 1.2037 REMARK 3 L13: 0.9339 L23: -0.0740 REMARK 3 S TENSOR REMARK 3 S11: 0.0371 S12: 0.0469 S13: 0.0908 REMARK 3 S21: 0.2550 S22: 0.0592 S23: 0.4035 REMARK 3 S31: 0.0236 S32: -0.0537 S33: -0.0810 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 136 THROUGH 147 ) REMARK 3 ORIGIN FOR THE GROUP (A): -42.2973 7.1942 -1.2644 REMARK 3 T TENSOR REMARK 3 T11: 0.5033 T22: 0.5456 REMARK 3 T33: 0.4632 T12: -0.1511 REMARK 3 T13: -0.1274 T23: 0.0399 REMARK 3 L TENSOR REMARK 3 L11: 9.0439 L22: 3.7560 REMARK 3 L33: 8.6431 L12: -4.2737 REMARK 3 L13: -3.5870 L23: 2.8875 REMARK 3 S TENSOR REMARK 3 S11: -0.7452 S12: 1.2854 S13: -0.5569 REMARK 3 S21: 0.0977 S22: -0.2699 S23: 1.1580 REMARK 3 S31: 0.5323 S32: -1.0348 S33: 0.9119 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 151 THROUGH 188 ) REMARK 3 ORIGIN FOR THE GROUP (A): -35.2670 13.6723 2.6177 REMARK 3 T TENSOR REMARK 3 T11: 0.2321 T22: 0.3422 REMARK 3 T33: 0.3134 T12: 0.0385 REMARK 3 T13: -0.0451 T23: 0.0140 REMARK 3 L TENSOR REMARK 3 L11: 2.5929 L22: 2.0943 REMARK 3 L33: 6.8031 L12: 0.0499 REMARK 3 L13: -3.6040 L23: 0.2020 REMARK 3 S TENSOR REMARK 3 S11: 0.1114 S12: 0.7308 S13: 0.1814 REMARK 3 S21: -0.4338 S22: -0.1671 S23: 0.2020 REMARK 3 S31: -0.3858 S32: -0.5945 S33: -0.0133 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 74 THROUGH 135 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.3786 2.6531 -4.0281 REMARK 3 T TENSOR REMARK 3 T11: 0.1917 T22: 0.2176 REMARK 3 T33: 0.3411 T12: 0.0181 REMARK 3 T13: 0.0052 T23: 0.0002 REMARK 3 L TENSOR REMARK 3 L11: 2.6141 L22: 2.9706 REMARK 3 L33: 4.7963 L12: -1.1665 REMARK 3 L13: 0.6514 L23: -1.4814 REMARK 3 S TENSOR REMARK 3 S11: 0.0737 S12: 0.0867 S13: 0.0486 REMARK 3 S21: 0.0254 S22: -0.1475 S23: -0.4521 REMARK 3 S31: 0.1122 S32: 0.2082 S33: 0.1091 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 136 THROUGH 166 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.5451 15.9364 -8.0791 REMARK 3 T TENSOR REMARK 3 T11: 0.3157 T22: 0.3571 REMARK 3 T33: 0.5031 T12: 0.0366 REMARK 3 T13: -0.0139 T23: -0.0285 REMARK 3 L TENSOR REMARK 3 L11: 3.6319 L22: 4.3526 REMARK 3 L33: 2.7450 L12: -0.2613 REMARK 3 L13: 1.1919 L23: -1.5395 REMARK 3 S TENSOR REMARK 3 S11: -0.5148 S12: -0.1131 S13: 0.7665 REMARK 3 S21: -0.2841 S22: -0.1512 S23: -0.3527 REMARK 3 S31: -1.0508 S32: -0.4661 S33: 0.3949 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 167 THROUGH 187 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.1467 4.9111 -11.7860 REMARK 3 T TENSOR REMARK 3 T11: 0.3107 T22: 0.2216 REMARK 3 T33: 0.3085 T12: 0.0324 REMARK 3 T13: 0.0886 T23: -0.0445 REMARK 3 L TENSOR REMARK 3 L11: 4.5415 L22: 4.9074 REMARK 3 L33: 9.0013 L12: -0.6698 REMARK 3 L13: 1.5600 L23: -2.0860 REMARK 3 S TENSOR REMARK 3 S11: -0.1345 S12: 0.2788 S13: 0.2014 REMARK 3 S21: -0.6833 S22: -0.1413 S23: -0.3580 REMARK 3 S31: 0.4157 S32: -0.3824 S33: 0.2203 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4WCO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 18-SEP-14. REMARK 100 THE DEPOSITION ID IS D_1000203573. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-DEC-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : AR-NW12A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14128 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.460 REMARK 200 RESOLUTION RANGE LOW (A) : 37.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.46 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.55 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 6.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.870 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 3HUP REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.98 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SODIUM CACODYLATE, PH6.5, 0.2 M REMARK 280 ZINC ACETATE AND 5% (W/V) PEG8000, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 41.18950 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.32900 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 41.18950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 42.32900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 70 REMARK 465 ASP A 188 REMARK 465 ILE A 189 REMARK 465 HIS A 190 REMARK 465 VAL A 191 REMARK 465 MET B 70 REMARK 465 GLN B 139 REMARK 465 GLY B 140 REMARK 465 GLY B 148 REMARK 465 THR B 149 REMARK 465 GLU B 150 REMARK 465 ILE B 189 REMARK 465 HIS B 190 REMARK 465 VAL B 191 REMARK 465 MET C 70 REMARK 465 LEU C 71 REMARK 465 GLN C 72 REMARK 465 ALA C 73 REMARK 465 ASP C 188 REMARK 465 ILE C 189 REMARK 465 HIS C 190 REMARK 465 VAL C 191 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 83 -121.78 52.96 REMARK 500 GLN B 72 164.64 62.10 REMARK 500 GLN B 83 -125.37 54.37 REMARK 500 ASN B 167 -169.95 -104.26 REMARK 500 GLN C 83 -123.48 54.33 REMARK 500 ASN C 167 -169.78 -102.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 109 OD1 REMARK 620 2 HOH A 703 O 84.8 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 130 OD2 REMARK 620 2 GLU C 179 OE1 91.2 REMARK 620 3 HOH C 808 O 88.3 2.9 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 202 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 179 OE2 REMARK 620 2 ASP C 130 OD2 89.7 REMARK 620 3 ACT C 205 OXT 92.5 3.1 REMARK 620 4 HOH C 805 O 90.9 2.6 3.8 REMARK 620 5 HOH C 807 O 93.2 3.9 3.2 2.3 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 502 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 179 OE1 REMARK 620 2 GLU B 179 OE2 59.5 REMARK 620 3 SO4 B 503 O2 104.7 94.7 REMARK 620 4 ASP C 109 OD1 88.7 116.2 148.7 REMARK 620 5 ASP C 109 OD2 97.0 156.5 91.7 58.2 REMARK 620 6 HOH C 813 O 148.4 97.8 98.4 82.3 103.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 203 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 107 OD1 REMARK 620 2 HOH C 812 O 95.8 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN C 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN C 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT C 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT C 205 DBREF 4WCO A 71 191 UNP Q9UHP7 CLC2D_HUMAN 71 191 DBREF 4WCO B 71 191 UNP Q9UHP7 CLC2D_HUMAN 71 191 DBREF 4WCO C 71 191 UNP Q9UHP7 CLC2D_HUMAN 71 191 SEQADV 4WCO MET A 70 UNP Q9UHP7 EXPRESSION TAG SEQADV 4WCO CYS A 176 UNP Q9UHP7 HIS 176 ENGINEERED MUTATION SEQADV 4WCO MET B 70 UNP Q9UHP7 EXPRESSION TAG SEQADV 4WCO CYS B 176 UNP Q9UHP7 HIS 176 ENGINEERED MUTATION SEQADV 4WCO MET C 70 UNP Q9UHP7 EXPRESSION TAG SEQADV 4WCO CYS C 176 UNP Q9UHP7 HIS 176 ENGINEERED MUTATION SEQRES 1 A 122 MET LEU GLN ALA ALA CYS PRO GLU SER TRP ILE GLY PHE SEQRES 2 A 122 GLN ARG LYS CYS PHE TYR PHE SER ASP ASP THR LYS ASN SEQRES 3 A 122 TRP THR SER SER GLN ARG PHE CYS ASP SER GLN ASP ALA SEQRES 4 A 122 ASP LEU ALA GLN VAL GLU SER PHE GLN GLU LEU ASN PHE SEQRES 5 A 122 LEU LEU ARG TYR LYS GLY PRO SER ASP HIS TRP ILE GLY SEQRES 6 A 122 LEU SER ARG GLU GLN GLY GLN PRO TRP LYS TRP ILE ASN SEQRES 7 A 122 GLY THR GLU TRP THR ARG GLN PHE PRO ILE LEU GLY ALA SEQRES 8 A 122 GLY GLU CYS ALA TYR LEU ASN ASP LYS GLY ALA SER SER SEQRES 9 A 122 ALA ARG CYS TYR THR GLU ARG LYS TRP ILE CYS SER LYS SEQRES 10 A 122 SER ASP ILE HIS VAL SEQRES 1 B 122 MET LEU GLN ALA ALA CYS PRO GLU SER TRP ILE GLY PHE SEQRES 2 B 122 GLN ARG LYS CYS PHE TYR PHE SER ASP ASP THR LYS ASN SEQRES 3 B 122 TRP THR SER SER GLN ARG PHE CYS ASP SER GLN ASP ALA SEQRES 4 B 122 ASP LEU ALA GLN VAL GLU SER PHE GLN GLU LEU ASN PHE SEQRES 5 B 122 LEU LEU ARG TYR LYS GLY PRO SER ASP HIS TRP ILE GLY SEQRES 6 B 122 LEU SER ARG GLU GLN GLY GLN PRO TRP LYS TRP ILE ASN SEQRES 7 B 122 GLY THR GLU TRP THR ARG GLN PHE PRO ILE LEU GLY ALA SEQRES 8 B 122 GLY GLU CYS ALA TYR LEU ASN ASP LYS GLY ALA SER SER SEQRES 9 B 122 ALA ARG CYS TYR THR GLU ARG LYS TRP ILE CYS SER LYS SEQRES 10 B 122 SER ASP ILE HIS VAL SEQRES 1 C 122 MET LEU GLN ALA ALA CYS PRO GLU SER TRP ILE GLY PHE SEQRES 2 C 122 GLN ARG LYS CYS PHE TYR PHE SER ASP ASP THR LYS ASN SEQRES 3 C 122 TRP THR SER SER GLN ARG PHE CYS ASP SER GLN ASP ALA SEQRES 4 C 122 ASP LEU ALA GLN VAL GLU SER PHE GLN GLU LEU ASN PHE SEQRES 5 C 122 LEU LEU ARG TYR LYS GLY PRO SER ASP HIS TRP ILE GLY SEQRES 6 C 122 LEU SER ARG GLU GLN GLY GLN PRO TRP LYS TRP ILE ASN SEQRES 7 C 122 GLY THR GLU TRP THR ARG GLN PHE PRO ILE LEU GLY ALA SEQRES 8 C 122 GLY GLU CYS ALA TYR LEU ASN ASP LYS GLY ALA SER SER SEQRES 9 C 122 ALA ARG CYS TYR THR GLU ARG LYS TRP ILE CYS SER LYS SEQRES 10 C 122 SER ASP ILE HIS VAL HET ZN A 501 1 HET ACT A 502 4 HET ZN B 501 1 HET ZN B 502 1 HET SO4 B 503 5 HET ZN B 504 1 HET ZN C 201 1 HET ZN C 202 1 HET ZN C 203 1 HET ACT C 204 4 HET ACT C 205 4 HETNAM ZN ZINC ION HETNAM ACT ACETATE ION HETNAM SO4 SULFATE ION FORMUL 4 ZN 7(ZN 2+) FORMUL 5 ACT 3(C2 H3 O2 1-) FORMUL 8 SO4 O4 S 2- FORMUL 15 HOH *27(H2 O) HELIX 1 AA1 ASN A 95 GLN A 106 1 12 HELIX 2 AA2 SER A 115 GLY A 127 1 13 HELIX 3 AA3 ASN B 95 GLN B 106 1 12 HELIX 4 AA4 SER B 115 GLY B 127 1 13 HELIX 5 AA5 ASN C 95 GLN C 106 1 12 HELIX 6 AA6 SER C 115 GLY C 127 1 13 SHEET 1 AA1 5 ILE A 80 PHE A 82 0 SHEET 2 AA1 5 LYS A 85 PHE A 89 -1 O PHE A 87 N ILE A 80 SHEET 3 AA1 5 LYS A 181 LYS A 186 -1 O LYS A 186 N CYS A 86 SHEET 4 AA1 5 HIS A 131 SER A 136 1 N TRP A 132 O LYS A 181 SHEET 5 AA1 5 LYS A 144 TRP A 145 -1 O LYS A 144 N SER A 136 SHEET 1 AA2 6 ASP A 109 LEU A 110 0 SHEET 2 AA2 6 LYS A 181 LYS A 186 -1 O SER A 185 N ASP A 109 SHEET 3 AA2 6 HIS A 131 SER A 136 1 N TRP A 132 O LYS A 181 SHEET 4 AA2 6 CYS A 163 LEU A 166 -1 O LEU A 166 N HIS A 131 SHEET 5 AA2 6 ALA A 171 ALA A 174 -1 O SER A 172 N TYR A 165 SHEET 6 AA2 6 ILE A 157 LEU A 158 1 N LEU A 158 O ALA A 171 SHEET 1 AA3 5 ILE B 80 PHE B 82 0 SHEET 2 AA3 5 LYS B 85 PHE B 89 -1 O PHE B 87 N ILE B 80 SHEET 3 AA3 5 LYS B 181 SER B 187 -1 O LYS B 186 N CYS B 86 SHEET 4 AA3 5 HIS B 131 SER B 136 1 N TRP B 132 O LYS B 181 SHEET 5 AA3 5 LYS B 144 TRP B 145 -1 O LYS B 144 N SER B 136 SHEET 1 AA4 6 ASP B 109 LEU B 110 0 SHEET 2 AA4 6 LYS B 181 SER B 187 -1 O SER B 185 N ASP B 109 SHEET 3 AA4 6 HIS B 131 SER B 136 1 N TRP B 132 O LYS B 181 SHEET 4 AA4 6 CYS B 163 LEU B 166 -1 O LEU B 166 N HIS B 131 SHEET 5 AA4 6 ALA B 171 ALA B 174 -1 O SER B 172 N TYR B 165 SHEET 6 AA4 6 ILE B 157 LEU B 158 1 N LEU B 158 O ALA B 171 SHEET 1 AA5 5 ILE C 80 PHE C 82 0 SHEET 2 AA5 5 LYS C 85 PHE C 89 -1 O PHE C 87 N ILE C 80 SHEET 3 AA5 5 LYS C 181 LYS C 186 -1 O LYS C 186 N CYS C 86 SHEET 4 AA5 5 HIS C 131 SER C 136 1 N TRP C 132 O LYS C 181 SHEET 5 AA5 5 LYS C 144 TRP C 145 -1 O LYS C 144 N SER C 136 SHEET 1 AA6 5 ASP C 109 LEU C 110 0 SHEET 2 AA6 5 LYS C 181 LYS C 186 -1 O SER C 185 N ASP C 109 SHEET 3 AA6 5 HIS C 131 SER C 136 1 N TRP C 132 O LYS C 181 SHEET 4 AA6 5 CYS C 163 LEU C 166 -1 O LEU C 166 N HIS C 131 SHEET 5 AA6 5 ALA C 171 ALA C 174 -1 O SER C 172 N TYR C 165 SSBOND 1 CYS A 75 CYS A 86 1555 1555 2.03 SSBOND 2 CYS A 103 CYS A 184 1555 1555 2.03 SSBOND 3 CYS A 163 CYS A 176 1555 1555 2.03 SSBOND 4 CYS B 75 CYS B 86 1555 1555 2.03 SSBOND 5 CYS B 103 CYS B 184 1555 1555 2.03 SSBOND 6 CYS B 163 CYS B 176 1555 1555 2.03 SSBOND 7 CYS C 75 CYS C 86 1555 1555 2.03 SSBOND 8 CYS C 103 CYS C 184 1555 1555 2.03 SSBOND 9 CYS C 163 CYS C 176 1555 1555 2.03 LINK OD1 ASP A 109 ZN ZN A 501 1555 1555 2.39 LINK OD2 ASP A 130 ZN ZN C 201 1555 3455 2.15 LINK OE2 GLU A 179 ZN ZN C 202 1555 3455 1.98 LINK ZN ZN A 501 O HOH A 703 1555 1555 2.42 LINK OD1 ASP B 109 ZN ZN B 504 1555 1555 2.40 LINK OE1 GLU B 179 ZN ZN B 502 1555 1555 2.40 LINK OE2 GLU B 179 ZN ZN B 502 1555 1555 1.95 LINK ZN ZN B 501 O3 SO4 B 503 1555 1555 2.52 LINK ZN ZN B 502 O2 SO4 B 503 1555 1555 2.05 LINK ZN ZN B 502 OD1 ASP C 109 1555 1555 1.95 LINK ZN ZN B 502 OD2 ASP C 109 1555 1555 2.47 LINK ZN ZN B 502 O HOH C 813 1555 1555 2.01 LINK OD1 ASP C 107 ZN ZN C 203 1555 1555 2.54 LINK OD2 ASP C 130 ZN ZN C 202 1555 1555 2.12 LINK OE1 GLU C 179 ZN ZN C 201 1555 1555 1.89 LINK ZN ZN C 201 O HOH C 808 1555 1555 2.55 LINK ZN ZN C 202 OXT ACT C 205 1555 1555 2.37 LINK ZN ZN C 202 O HOH C 805 1555 1555 2.14 LINK ZN ZN C 202 O HOH C 807 1555 1555 2.68 LINK ZN ZN C 203 O HOH C 812 1555 1555 2.68 SITE 1 AC1 3 ASP A 104 ASP A 109 HOH A 703 SITE 1 AC2 6 TYR A 88 SER A 90 ASP A 91 ASP A 92 SITE 2 AC2 6 PHE A 102 TRP A 182 SITE 1 AC3 2 ASP B 92 SO4 B 503 SITE 1 AC4 4 GLU B 179 SO4 B 503 ASP C 109 HOH C 813 SITE 1 AC5 5 GLU B 179 ZN B 501 ZN B 502 ASP C 109 SITE 2 AC5 5 HOH C 813 SITE 1 AC6 2 ASP B 104 ASP B 109 SITE 1 AC7 4 ASP A 130 GLU C 179 ACT C 204 HOH C 808 SITE 1 AC8 5 GLU A 179 ASP C 130 ACT C 205 HOH C 805 SITE 2 AC8 5 HOH C 807 SITE 1 AC9 3 GLU A 138 ASP C 107 HOH C 812 SITE 1 AD1 5 ASP A 130 TYR A 165 ARG A 180 GLU C 179 SITE 2 AD1 5 ZN C 201 SITE 1 AD2 5 GLU A 179 ASP C 130 TYR C 165 ARG C 180 SITE 2 AD2 5 ZN C 202 CRYST1 82.379 84.658 53.422 90.00 90.00 90.00 P 21 21 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012139 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011812 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018719 0.00000