HEADER TRANSFERASE 17-SEP-14 4WFZ TITLE COXSACKIEVIRUS B3 3DPOL RNA DEPENDENT RNA POLYMERASE - NACL CRYSTAL TITLE 2 FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: RNA-DIRECTED RNA POLYMERASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 1724-2185; COMPND 5 SYNONYM: RDRP, GENOME POLYPROTEIN; COMPND 6 EC: 2.7.7.48; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: COXSACKIEVIRUS B3; SOURCE 3 ORGANISM_TAXID: 103903; SOURCE 4 STRAIN: NANCY; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET26/UB KEYWDS RNA-DEPENDENT RNA POLYMERASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR O.B.PEERSEN,S.M.MCDONALD REVDAT 7 27-SEP-23 4WFZ 1 REMARK REVDAT 6 11-DEC-19 4WFZ 1 REMARK REVDAT 5 22-NOV-17 4WFZ 1 REMARK REVDAT 4 13-SEP-17 4WFZ 1 SOURCE JRNL REMARK REVDAT 3 24-DEC-14 4WFZ 1 JRNL REVDAT 2 29-OCT-14 4WFZ 1 JRNL REVDAT 1 22-OCT-14 4WFZ 0 JRNL AUTH G.CAMPAGNOLA,S.MCDONALD,S.BEAUCOURT,M.VIGNUZZI,O.B.PEERSEN JRNL TITL STRUCTURE-FUNCTION RELATIONSHIPS UNDERLYING THE REPLICATION JRNL TITL 2 FIDELITY OF VIRAL RNA-DEPENDENT RNA POLYMERASES. JRNL REF J.VIROL. V. 89 275 2015 JRNL REFN ESSN 1098-5514 JRNL PMID 25320316 JRNL DOI 10.1128/JVI.01574-14 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.4_1496) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 58.88 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.1 REMARK 3 NUMBER OF REFLECTIONS : 65588 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.231 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.600 REMARK 3 FREE R VALUE TEST SET COUNT : 3455 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 58.9075 - 5.2707 1.00 5563 144 0.1676 0.1862 REMARK 3 2 5.2707 - 4.1839 1.00 5576 145 0.1452 0.1497 REMARK 3 3 4.1839 - 3.6551 1.00 5584 149 0.1444 0.1876 REMARK 3 4 3.6551 - 3.3209 1.00 5575 149 0.1638 0.2209 REMARK 3 5 3.3209 - 3.0829 1.00 5530 152 0.1833 0.2126 REMARK 3 6 3.0829 - 2.9012 1.00 5594 154 0.1963 0.1881 REMARK 3 7 2.9012 - 2.7559 1.00 5521 153 0.1977 0.2130 REMARK 3 8 2.7559 - 2.6359 1.00 5589 153 0.2043 0.2784 REMARK 3 9 2.6359 - 2.5344 1.00 5578 148 0.2121 0.2318 REMARK 3 10 2.5344 - 2.4470 1.00 5540 145 0.2125 0.2827 REMARK 3 11 2.4470 - 2.3705 1.00 5600 153 0.2243 0.3053 REMARK 3 12 2.3705 - 2.3027 1.00 5569 148 0.2287 0.2488 REMARK 3 13 2.3027 - 2.2421 1.00 5536 143 0.2268 0.2630 REMARK 3 14 2.2421 - 2.1874 1.00 5570 147 0.2380 0.2834 REMARK 3 15 2.1874 - 2.1376 1.00 5563 148 0.2419 0.2785 REMARK 3 16 2.1376 - 2.0922 1.00 5629 148 0.2606 0.2764 REMARK 3 17 2.0922 - 2.0503 1.00 5533 146 0.2719 0.2834 REMARK 3 18 2.0503 - 2.0116 1.00 5525 145 0.2849 0.3361 REMARK 3 19 2.0116 - 1.9757 1.00 5613 157 0.2959 0.3188 REMARK 3 20 1.9757 - 1.9422 1.00 5527 149 0.3104 0.2913 REMARK 3 21 1.9422 - 1.9109 0.99 5439 147 0.3275 0.3360 REMARK 3 22 1.9109 - 1.8815 0.95 5337 143 0.3385 0.4067 REMARK 3 23 1.8815 - 1.8538 0.79 4382 112 0.3719 0.4931 REMARK 3 24 1.8538 - 1.8277 0.46 2577 68 0.4112 0.4431 REMARK 3 25 1.8277 - 1.8030 0.10 575 9 0.5089 0.6717 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.330 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.66 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 3783 REMARK 3 ANGLE : 1.139 5122 REMARK 3 CHIRALITY : 0.047 558 REMARK 3 PLANARITY : 0.005 651 REMARK 3 DIHEDRAL : 13.674 1398 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4WFZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-SEP-14. REMARK 100 THE DEPOSITION ID IS D_1000203754. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-SEP-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 4.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : NOIR-1 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XSCALE REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 75393 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 58.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 200 DATA REDUNDANCY : 13.40 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.8100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 3DDK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.71 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.81 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.085 M HEPES, 3.6 M NACL , 15% REMARK 280 GLYCEROL, PH 7.5, VAPOR DIFFUSION, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 144.37850 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 37.21150 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 37.21150 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 216.56775 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 37.21150 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 37.21150 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 72.18925 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 37.21150 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 37.21150 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 216.56775 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 37.21150 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 37.21150 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 72.18925 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 144.37850 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOLOGICAL UNIT IS THE SAME AS ASYM. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 649 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 1052 O HOH A 1091 2.07 REMARK 500 O HOH A 1071 O HOH A 1075 2.18 REMARK 500 OH TYR A 62 O HOH A 745 2.19 REMARK 500 O HOH A 659 O HOH A 954 2.19 REMARK 500 O HOH A 1039 O HOH A 1056 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 TRP A 218 CA - CB - CG ANGL. DEV. = -11.7 DEGREES REMARK 500 ASN A 365 C - N - CA ANGL. DEV. = 15.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 277 -107.79 51.34 REMARK 500 LYS A 360 -150.61 52.73 REMARK 500 ASN A 365 138.70 95.40 REMARK 500 GLU A 366 79.90 25.24 REMARK 500 ASP A 407 110.91 -165.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 CYS A 363 PHE A 364 -140.57 REMARK 500 ASN A 365 GLU A 366 -143.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1026 DISTANCE = 6.11 ANGSTROMS REMARK 525 HOH A1085 DISTANCE = 5.89 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 501 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU A 269 O REMARK 620 2 CYS A 270 O 81.6 REMARK 620 3 SER A 272 OG 88.7 97.9 REMARK 620 4 GLY A 285 O 139.2 73.0 125.5 REMARK 620 5 GLY A 286 O 84.9 110.8 149.2 75.4 REMARK 620 6 HOH A 731 O 118.9 155.2 70.7 95.3 86.2 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 501 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3DDK RELATED DB: PDB REMARK 900 RELATED ID: 4WFX RELATED DB: PDB REMARK 900 RELATED ID: 4WFY RELATED DB: PDB DBREF 4WFZ A 1 462 UNP P03313 POLG_CXB3N 1724 2185 SEQADV 4WFZ ILE A 252 UNP P03313 LEU 1975 CONFLICT SEQADV 4WFZ VAL A 372 UNP P03313 ALA 2095 VARIANT SEQRES 1 A 462 GLY GLU ILE GLU PHE ILE GLU SER SER LYS ASP ALA GLY SEQRES 2 A 462 PHE PRO VAL ILE ASN THR PRO SER LYS THR LYS LEU GLU SEQRES 3 A 462 PRO SER VAL PHE HIS GLN VAL PHE GLU GLY ASN LYS GLU SEQRES 4 A 462 PRO ALA VAL LEU ARG SER GLY ASP PRO ARG LEU LYS ALA SEQRES 5 A 462 ASN PHE GLU GLU ALA ILE PHE SER LYS TYR ILE GLY ASN SEQRES 6 A 462 VAL ASN THR HIS VAL ASP GLU TYR MET LEU GLU ALA VAL SEQRES 7 A 462 ASP HIS TYR ALA GLY GLN LEU ALA THR LEU ASP ILE SER SEQRES 8 A 462 THR GLU PRO MET LYS LEU GLU ASP ALA VAL TYR GLY THR SEQRES 9 A 462 GLU GLY LEU GLU ALA LEU ASP LEU THR THR SER ALA GLY SEQRES 10 A 462 TYR PRO TYR VAL ALA LEU GLY ILE LYS LYS ARG ASP ILE SEQRES 11 A 462 LEU SER LYS LYS THR LYS ASP LEU THR LYS LEU LYS GLU SEQRES 12 A 462 CYS MET ASP LYS TYR GLY LEU ASN LEU PRO MET VAL THR SEQRES 13 A 462 TYR VAL LYS ASP GLU LEU ARG SER ILE GLU LYS VAL ALA SEQRES 14 A 462 LYS GLY LYS SER ARG LEU ILE GLU ALA SER SER LEU ASN SEQRES 15 A 462 ASP SER VAL ALA MET ARG GLN THR PHE GLY ASN LEU TYR SEQRES 16 A 462 LYS THR PHE HIS LEU ASN PRO GLY VAL VAL THR GLY SER SEQRES 17 A 462 ALA VAL GLY CYS ASP PRO ASP LEU PHE TRP SER LYS ILE SEQRES 18 A 462 PRO VAL MET LEU ASP GLY HIS LEU ILE ALA PHE ASP TYR SEQRES 19 A 462 SER GLY TYR ASP ALA SER LEU SER PRO VAL TRP PHE ALA SEQRES 20 A 462 CYS LEU LYS MET ILE LEU GLU LYS LEU GLY TYR THR HIS SEQRES 21 A 462 LYS GLU THR ASN TYR ILE ASP TYR LEU CYS ASN SER HIS SEQRES 22 A 462 HIS LEU TYR ARG ASP LYS HIS TYR PHE VAL ARG GLY GLY SEQRES 23 A 462 MET PRO SER GLY CYS SER GLY THR SER ILE PHE ASN SER SEQRES 24 A 462 MET ILE ASN ASN ILE ILE ILE ARG THR LEU MET LEU LYS SEQRES 25 A 462 VAL TYR LYS GLY ILE ASP LEU ASP GLN PHE ARG MET ILE SEQRES 26 A 462 ALA TYR GLY ASP ASP VAL ILE ALA SER TYR PRO TRP PRO SEQRES 27 A 462 ILE ASP ALA SER LEU LEU ALA GLU ALA GLY LYS GLY TYR SEQRES 28 A 462 GLY LEU ILE MET THR PRO ALA ASP LYS GLY GLU CYS PHE SEQRES 29 A 462 ASN GLU VAL THR TRP THR ASN VAL THR PHE LEU LYS ARG SEQRES 30 A 462 TYR PHE ARG ALA ASP GLU GLN TYR PRO PHE LEU VAL HIS SEQRES 31 A 462 PRO VAL MET PRO MET LYS ASP ILE HIS GLU SER ILE ARG SEQRES 32 A 462 TRP THR LYS ASP PRO LYS ASN THR GLN ASP HIS VAL ARG SEQRES 33 A 462 SER LEU CYS LEU LEU ALA TRP HIS ASN GLY GLU HIS GLU SEQRES 34 A 462 TYR GLU GLU PHE ILE ARG LYS ILE ARG SER VAL PRO VAL SEQRES 35 A 462 GLY ARG CYS LEU THR LEU PRO ALA PHE SER THR LEU ARG SEQRES 36 A 462 ARG LYS TRP LEU ASP SER PHE HET NA A 501 1 HETNAM NA SODIUM ION FORMUL 2 NA NA 1+ FORMUL 3 HOH *497(H2 O) HELIX 1 AA1 LYS A 10 GLY A 13 5 4 HELIX 2 AA2 ASN A 53 SER A 60 1 8 HELIX 3 AA3 ASP A 71 THR A 87 1 17 HELIX 4 AA4 LYS A 96 GLY A 103 1 8 HELIX 5 AA5 PRO A 119 LEU A 123 5 5 HELIX 6 AA6 LYS A 126 LEU A 131 1 6 HELIX 7 AA7 LEU A 138 GLY A 149 1 12 HELIX 8 AA8 SER A 164 LYS A 170 1 7 HELIX 9 AA9 SER A 180 ASN A 201 1 22 HELIX 10 AB1 ASP A 213 LEU A 225 1 13 HELIX 11 AB2 GLY A 236 LEU A 241 1 6 HELIX 12 AB3 SER A 242 LEU A 256 1 15 HELIX 13 AB4 THR A 263 CYS A 270 1 8 HELIX 14 AB5 GLY A 293 TYR A 314 1 22 HELIX 15 AB6 ASP A 318 PHE A 322 5 5 HELIX 16 AB7 ASP A 340 TYR A 351 1 12 HELIX 17 AB8 PRO A 394 ARG A 403 1 10 HELIX 18 AB9 ASP A 407 LYS A 409 5 3 HELIX 19 AC1 ASN A 410 TRP A 423 1 14 HELIX 20 AC2 GLY A 426 ARG A 438 1 13 HELIX 21 AC3 SER A 439 LEU A 446 5 8 HELIX 22 AC4 ALA A 450 PHE A 462 1 13 SHEET 1 AA1 5 GLU A 2 SER A 8 0 SHEET 2 AA1 5 LYS A 279 ARG A 284 -1 O ARG A 284 N GLU A 2 SHEET 3 AA1 5 ASN A 271 TYR A 276 -1 N SER A 272 O VAL A 283 SHEET 4 AA1 5 MET A 154 VAL A 158 1 N THR A 156 O LEU A 275 SHEET 5 AA1 5 LEU A 175 ALA A 178 -1 O ILE A 176 N TYR A 157 SHEET 1 AA2 2 GLU A 26 PRO A 27 0 SHEET 2 AA2 2 TRP A 404 THR A 405 -1 O THR A 405 N GLU A 26 SHEET 1 AA3 2 GLU A 39 PRO A 40 0 SHEET 2 AA3 2 LEU A 162 ARG A 163 -1 O ARG A 163 N GLU A 39 SHEET 1 AA4 3 HIS A 228 ILE A 230 0 SHEET 2 AA4 3 ASP A 330 TYR A 335 -1 O ALA A 333 N ILE A 230 SHEET 3 AA4 3 ARG A 323 TYR A 327 -1 N ILE A 325 O ILE A 332 SHEET 1 AA5 2 PHE A 232 TYR A 234 0 SHEET 2 AA5 2 MET A 355 PRO A 357 -1 O THR A 356 N ASP A 233 SHEET 1 AA6 3 THR A 373 PHE A 374 0 SHEET 2 AA6 3 ARG A 377 ALA A 381 -1 O ARG A 377 N PHE A 374 SHEET 3 AA6 3 VAL A 389 VAL A 392 -1 O HIS A 390 N ARG A 380 LINK O LEU A 269 NA NA A 501 1555 1555 2.48 LINK O CYS A 270 NA NA A 501 1555 1555 2.56 LINK OG SER A 272 NA NA A 501 1555 1555 2.60 LINK O GLY A 285 NA NA A 501 1555 1555 2.53 LINK O GLY A 286 NA NA A 501 1555 1555 2.48 LINK NA NA A 501 O HOH A 731 1555 1555 2.51 CISPEP 1 TYR A 118 PRO A 119 0 1.64 CISPEP 2 PHE A 364 ASN A 365 0 8.20 SITE 1 AC1 6 LEU A 269 CYS A 270 SER A 272 GLY A 285 SITE 2 AC1 6 GLY A 286 HOH A 731 CRYST1 74.423 74.423 288.757 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013437 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013437 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003463 0.00000