data_4XO0 # _entry.id 4XO0 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4XO0 pdb_00004xo0 10.2210/pdb4xo0/pdb WWPDB D_1000206018 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-05-27 2 'Structure model' 1 1 2016-05-18 3 'Structure model' 1 2 2017-01-11 4 'Structure model' 1 3 2017-09-20 5 'Structure model' 1 4 2019-12-25 6 'Structure model' 1 5 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Non-polymer description' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Author supporting evidence' 4 4 'Structure model' 'Refinement description' 5 5 'Structure model' 'Author supporting evidence' 6 6 'Structure model' 'Data collection' 7 6 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' pdbx_audit_support 2 4 'Structure model' software 3 5 'Structure model' pdbx_audit_support 4 6 'Structure model' chem_comp_atom 5 6 'Structure model' chem_comp_bond 6 6 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_pdbx_audit_support.funding_organization' 2 5 'Structure model' '_pdbx_audit_support.funding_organization' 3 6 'Structure model' '_database_2.pdbx_DOI' 4 6 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 4XO0 _pdbx_database_status.recvd_initial_deposition_date 2015-01-16 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB . 4XNO unspecified PDB . 4XPC unspecified PDB . 4XPE unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Georgiadis, M.M.' 1 'Singh, I.' 2 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'J. Am. Chem. Soc.' _citation.journal_id_ASTM JACSAT _citation.journal_id_CSD ? _citation.journal_id_ISSN 1520-5126 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 137 _citation.language ? _citation.page_first 6947 _citation.page_last 6955 _citation.title 'Structural basis for a six nucleotide genetic alphabet.' _citation.year 2015 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/jacs.5b03482 _citation.pdbx_database_id_PubMed 25961938 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Georgiadis, M.M.' 1 ? primary 'Singh, I.' 2 ? primary 'Kellett, W.F.' 3 ? primary 'Hoshika, S.' 4 ? primary 'Benner, S.A.' 5 ? primary 'Richards, N.G.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'reverse transcriptase' 29347.754 1 2.7.7.49,2.7.7.7,3.1.26.4 ? 'unp residues 683-937' ? 2 polymer syn ;DNA (5'-D(*CP*TP*TP*AP*TP*(1WA)P*(1WA)P*T)-3') ; 2436.646 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(P*AP*(1W5)P*(1W5)P*AP*TP*AP*AP*G)-3') ; 2507.652 1 ? ? ? ? 4 water nat water 18.015 201 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name Pr180gag-pol # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GSHMTWLSDFPQAWAETGGMGLAVRQAPLIIPLKATSTPVSIKQYPMSQEARLGIKPHIQRLLDQGILVPCQSPWNTPLL PVKKPGTNDYRPVQDLREVNKRVEDIHPTVPNPYNLLSGLPPSHQWYTVLDLKDAFFCLRLHPTSQPLFAFEWRDPEMGI SGQLTWTRLPQGFKNSPTLFDEALHRDLADFRIQHPDLILLQYVDDLLLAATSELDCQQGTRALLQTLGNLGYRASAKKA QICQKQVKYLGYLLKEGQR ; ;GSHMTWLSDFPQAWAETGGMGLAVRQAPLIIPLKATSTPVSIKQYPMSQEARLGIKPHIQRLLDQGILVPCQSPWNTPLL PVKKPGTNDYRPVQDLREVNKRVEDIHPTVPNPYNLLSGLPPSHQWYTVLDLKDAFFCLRLHPTSQPLFAFEWRDPEMGI SGQLTWTRLPQGFKNSPTLFDEALHRDLADFRIQHPDLILLQYVDDLLLAATSELDCQQGTRALLQTLGNLGYRASAKKA QICQKQVKYLGYLLKEGQR ; A ? 2 polydeoxyribonucleotide no yes '(DC)(DT)(DT)(DA)(DT)(1WA)(1WA)(DT)' CTTATXXT B ? 3 polydeoxyribonucleotide no yes '(DA)(1W5)(1W5)(DA)(DT)(DA)(DA)(DG)' AXXATAAG G ? # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 THR n 1 6 TRP n 1 7 LEU n 1 8 SER n 1 9 ASP n 1 10 PHE n 1 11 PRO n 1 12 GLN n 1 13 ALA n 1 14 TRP n 1 15 ALA n 1 16 GLU n 1 17 THR n 1 18 GLY n 1 19 GLY n 1 20 MET n 1 21 GLY n 1 22 LEU n 1 23 ALA n 1 24 VAL n 1 25 ARG n 1 26 GLN n 1 27 ALA n 1 28 PRO n 1 29 LEU n 1 30 ILE n 1 31 ILE n 1 32 PRO n 1 33 LEU n 1 34 LYS n 1 35 ALA n 1 36 THR n 1 37 SER n 1 38 THR n 1 39 PRO n 1 40 VAL n 1 41 SER n 1 42 ILE n 1 43 LYS n 1 44 GLN n 1 45 TYR n 1 46 PRO n 1 47 MET n 1 48 SER n 1 49 GLN n 1 50 GLU n 1 51 ALA n 1 52 ARG n 1 53 LEU n 1 54 GLY n 1 55 ILE n 1 56 LYS n 1 57 PRO n 1 58 HIS n 1 59 ILE n 1 60 GLN n 1 61 ARG n 1 62 LEU n 1 63 LEU n 1 64 ASP n 1 65 GLN n 1 66 GLY n 1 67 ILE n 1 68 LEU n 1 69 VAL n 1 70 PRO n 1 71 CYS n 1 72 GLN n 1 73 SER n 1 74 PRO n 1 75 TRP n 1 76 ASN n 1 77 THR n 1 78 PRO n 1 79 LEU n 1 80 LEU n 1 81 PRO n 1 82 VAL n 1 83 LYS n 1 84 LYS n 1 85 PRO n 1 86 GLY n 1 87 THR n 1 88 ASN n 1 89 ASP n 1 90 TYR n 1 91 ARG n 1 92 PRO n 1 93 VAL n 1 94 GLN n 1 95 ASP n 1 96 LEU n 1 97 ARG n 1 98 GLU n 1 99 VAL n 1 100 ASN n 1 101 LYS n 1 102 ARG n 1 103 VAL n 1 104 GLU n 1 105 ASP n 1 106 ILE n 1 107 HIS n 1 108 PRO n 1 109 THR n 1 110 VAL n 1 111 PRO n 1 112 ASN n 1 113 PRO n 1 114 TYR n 1 115 ASN n 1 116 LEU n 1 117 LEU n 1 118 SER n 1 119 GLY n 1 120 LEU n 1 121 PRO n 1 122 PRO n 1 123 SER n 1 124 HIS n 1 125 GLN n 1 126 TRP n 1 127 TYR n 1 128 THR n 1 129 VAL n 1 130 LEU n 1 131 ASP n 1 132 LEU n 1 133 LYS n 1 134 ASP n 1 135 ALA n 1 136 PHE n 1 137 PHE n 1 138 CYS n 1 139 LEU n 1 140 ARG n 1 141 LEU n 1 142 HIS n 1 143 PRO n 1 144 THR n 1 145 SER n 1 146 GLN n 1 147 PRO n 1 148 LEU n 1 149 PHE n 1 150 ALA n 1 151 PHE n 1 152 GLU n 1 153 TRP n 1 154 ARG n 1 155 ASP n 1 156 PRO n 1 157 GLU n 1 158 MET n 1 159 GLY n 1 160 ILE n 1 161 SER n 1 162 GLY n 1 163 GLN n 1 164 LEU n 1 165 THR n 1 166 TRP n 1 167 THR n 1 168 ARG n 1 169 LEU n 1 170 PRO n 1 171 GLN n 1 172 GLY n 1 173 PHE n 1 174 LYS n 1 175 ASN n 1 176 SER n 1 177 PRO n 1 178 THR n 1 179 LEU n 1 180 PHE n 1 181 ASP n 1 182 GLU n 1 183 ALA n 1 184 LEU n 1 185 HIS n 1 186 ARG n 1 187 ASP n 1 188 LEU n 1 189 ALA n 1 190 ASP n 1 191 PHE n 1 192 ARG n 1 193 ILE n 1 194 GLN n 1 195 HIS n 1 196 PRO n 1 197 ASP n 1 198 LEU n 1 199 ILE n 1 200 LEU n 1 201 LEU n 1 202 GLN n 1 203 TYR n 1 204 VAL n 1 205 ASP n 1 206 ASP n 1 207 LEU n 1 208 LEU n 1 209 LEU n 1 210 ALA n 1 211 ALA n 1 212 THR n 1 213 SER n 1 214 GLU n 1 215 LEU n 1 216 ASP n 1 217 CYS n 1 218 GLN n 1 219 GLN n 1 220 GLY n 1 221 THR n 1 222 ARG n 1 223 ALA n 1 224 LEU n 1 225 LEU n 1 226 GLN n 1 227 THR n 1 228 LEU n 1 229 GLY n 1 230 ASN n 1 231 LEU n 1 232 GLY n 1 233 TYR n 1 234 ARG n 1 235 ALA n 1 236 SER n 1 237 ALA n 1 238 LYS n 1 239 LYS n 1 240 ALA n 1 241 GLN n 1 242 ILE n 1 243 CYS n 1 244 GLN n 1 245 LYS n 1 246 GLN n 1 247 VAL n 1 248 LYS n 1 249 TYR n 1 250 LEU n 1 251 GLY n 1 252 TYR n 1 253 LEU n 1 254 LEU n 1 255 LYS n 1 256 GLU n 1 257 GLY n 1 258 GLN n 1 259 ARG n 2 1 DC n 2 2 DT n 2 3 DT n 2 4 DA n 2 5 DT n 2 6 1WA n 2 7 1WA n 2 8 DT n 3 1 DA n 3 2 1W5 n 3 3 1W5 n 3 4 DA n 3 5 DT n 3 6 DA n 3 7 DA n 3 8 DG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 259 _entity_src_gen.gene_src_common_name MoMLV _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene gag-pol _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'isolate Shinnick' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Moloney murine leukemia virus (isolate Shinnick)' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 928306 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 8 'synthetic construct' ? 32630 ? 3 1 sample 1 8 'synthetic construct' ? 32630 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 1W5 'DNA linking' . '(1R)-1-(6-amino-2-hydroxy-5-nitropyridin-3-yl)-1,4-anhydro-2-deoxy-5-O-phosphono-D-erythro-pentitol' ? 'C10 H14 N3 O9 P' 351.207 1WA 'DNA linking' . '2-amino-8-(2-deoxy-5-O-phosphono-beta-D-erythro-pentofuranosyl)-4-hydroxy-1H-imidazo[1,2-a][1,3,5]triazine-5,8-diium' ? 'C10 H16 N5 O7 P 2' 349.237 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 20 ? ? ? A . n A 1 2 SER 2 21 ? ? ? A . n A 1 3 HIS 3 22 ? ? ? A . n A 1 4 MET 4 23 ? ? ? A . n A 1 5 THR 5 24 24 THR THR A . n A 1 6 TRP 6 25 25 TRP TRP A . n A 1 7 LEU 7 26 26 LEU LEU A . n A 1 8 SER 8 27 27 SER SER A . n A 1 9 ASP 9 28 28 ASP ASP A . n A 1 10 PHE 10 29 29 PHE PHE A . n A 1 11 PRO 11 30 30 PRO PRO A . n A 1 12 GLN 12 31 31 GLN GLN A . n A 1 13 ALA 13 32 32 ALA ALA A . n A 1 14 TRP 14 33 33 TRP TRP A . n A 1 15 ALA 15 34 34 ALA ALA A . n A 1 16 GLU 16 35 35 GLU GLU A . n A 1 17 THR 17 36 36 THR THR A . n A 1 18 GLY 18 37 37 GLY GLY A . n A 1 19 GLY 19 38 38 GLY GLY A . n A 1 20 MET 20 39 39 MET MET A . n A 1 21 GLY 21 40 40 GLY GLY A . n A 1 22 LEU 22 41 41 LEU LEU A . n A 1 23 ALA 23 42 42 ALA ALA A . n A 1 24 VAL 24 43 43 VAL VAL A . n A 1 25 ARG 25 44 44 ARG ARG A . n A 1 26 GLN 26 45 45 GLN GLN A . n A 1 27 ALA 27 46 46 ALA ALA A . n A 1 28 PRO 28 47 47 PRO PRO A . n A 1 29 LEU 29 48 48 LEU LEU A . n A 1 30 ILE 30 49 49 ILE ILE A . n A 1 31 ILE 31 50 50 ILE ILE A . n A 1 32 PRO 32 51 51 PRO PRO A . n A 1 33 LEU 33 52 52 LEU LEU A . n A 1 34 LYS 34 53 53 LYS LYS A . n A 1 35 ALA 35 54 54 ALA ALA A . n A 1 36 THR 36 55 55 THR THR A . n A 1 37 SER 37 56 56 SER SER A . n A 1 38 THR 38 57 57 THR THR A . n A 1 39 PRO 39 58 58 PRO PRO A . n A 1 40 VAL 40 59 59 VAL VAL A . n A 1 41 SER 41 60 60 SER SER A . n A 1 42 ILE 42 61 61 ILE ILE A . n A 1 43 LYS 43 62 62 LYS LYS A . n A 1 44 GLN 44 63 63 GLN GLN A . n A 1 45 TYR 45 64 64 TYR TYR A . n A 1 46 PRO 46 65 65 PRO PRO A . n A 1 47 MET 47 66 66 MET MET A . n A 1 48 SER 48 67 67 SER SER A . n A 1 49 GLN 49 68 68 GLN GLN A . n A 1 50 GLU 50 69 69 GLU GLU A . n A 1 51 ALA 51 70 70 ALA ALA A . n A 1 52 ARG 52 71 71 ARG ARG A . n A 1 53 LEU 53 72 72 LEU LEU A . n A 1 54 GLY 54 73 73 GLY GLY A . n A 1 55 ILE 55 74 74 ILE ILE A . n A 1 56 LYS 56 75 75 LYS LYS A . n A 1 57 PRO 57 76 76 PRO PRO A . n A 1 58 HIS 58 77 77 HIS HIS A . n A 1 59 ILE 59 78 78 ILE ILE A . n A 1 60 GLN 60 79 79 GLN GLN A . n A 1 61 ARG 61 80 80 ARG ARG A . n A 1 62 LEU 62 81 81 LEU LEU A . n A 1 63 LEU 63 82 82 LEU LEU A . n A 1 64 ASP 64 83 83 ASP ASP A . n A 1 65 GLN 65 84 84 GLN GLN A . n A 1 66 GLY 66 85 85 GLY GLY A . n A 1 67 ILE 67 86 86 ILE ILE A . n A 1 68 LEU 68 87 87 LEU LEU A . n A 1 69 VAL 69 88 88 VAL VAL A . n A 1 70 PRO 70 89 89 PRO PRO A . n A 1 71 CYS 71 90 90 CYS CYS A . n A 1 72 GLN 72 91 91 GLN GLN A . n A 1 73 SER 73 92 92 SER SER A . n A 1 74 PRO 74 93 93 PRO PRO A . n A 1 75 TRP 75 94 94 TRP TRP A . n A 1 76 ASN 76 95 95 ASN ASN A . n A 1 77 THR 77 96 96 THR THR A . n A 1 78 PRO 78 97 97 PRO PRO A . n A 1 79 LEU 79 98 98 LEU LEU A . n A 1 80 LEU 80 99 99 LEU LEU A . n A 1 81 PRO 81 100 100 PRO PRO A . n A 1 82 VAL 82 101 101 VAL VAL A . n A 1 83 LYS 83 102 ? ? ? A . n A 1 84 LYS 84 103 ? ? ? A . n A 1 85 PRO 85 104 ? ? ? A . n A 1 86 GLY 86 105 ? ? ? A . n A 1 87 THR 87 106 ? ? ? A . n A 1 88 ASN 88 107 ? ? ? A . n A 1 89 ASP 89 108 ? ? ? A . n A 1 90 TYR 90 109 109 TYR TYR A . n A 1 91 ARG 91 110 110 ARG ARG A . n A 1 92 PRO 92 111 111 PRO PRO A . n A 1 93 VAL 93 112 112 VAL VAL A . n A 1 94 GLN 94 113 113 GLN GLN A . n A 1 95 ASP 95 114 114 ASP ASP A . n A 1 96 LEU 96 115 115 LEU LEU A . n A 1 97 ARG 97 116 116 ARG ARG A . n A 1 98 GLU 98 117 117 GLU GLU A . n A 1 99 VAL 99 118 118 VAL VAL A . n A 1 100 ASN 100 119 119 ASN ASN A . n A 1 101 LYS 101 120 120 LYS LYS A . n A 1 102 ARG 102 121 121 ARG ARG A . n A 1 103 VAL 103 122 122 VAL VAL A . n A 1 104 GLU 104 123 123 GLU GLU A . n A 1 105 ASP 105 124 124 ASP ASP A . n A 1 106 ILE 106 125 125 ILE ILE A . n A 1 107 HIS 107 126 126 HIS HIS A . n A 1 108 PRO 108 127 127 PRO PRO A . n A 1 109 THR 109 128 128 THR THR A . n A 1 110 VAL 110 129 129 VAL VAL A . n A 1 111 PRO 111 130 130 PRO PRO A . n A 1 112 ASN 112 131 131 ASN ASN A . n A 1 113 PRO 113 132 132 PRO PRO A . n A 1 114 TYR 114 133 133 TYR TYR A . n A 1 115 ASN 115 134 134 ASN ASN A . n A 1 116 LEU 116 135 135 LEU LEU A . n A 1 117 LEU 117 136 136 LEU LEU A . n A 1 118 SER 118 137 137 SER SER A . n A 1 119 GLY 119 138 138 GLY GLY A . n A 1 120 LEU 120 139 139 LEU LEU A . n A 1 121 PRO 121 140 140 PRO PRO A . n A 1 122 PRO 122 141 141 PRO PRO A . n A 1 123 SER 123 142 142 SER SER A . n A 1 124 HIS 124 143 143 HIS HIS A . n A 1 125 GLN 125 144 144 GLN GLN A . n A 1 126 TRP 126 145 145 TRP TRP A . n A 1 127 TYR 127 146 146 TYR TYR A . n A 1 128 THR 128 147 147 THR THR A . n A 1 129 VAL 129 148 148 VAL VAL A . n A 1 130 LEU 130 149 149 LEU LEU A . n A 1 131 ASP 131 150 150 ASP ASP A . n A 1 132 LEU 132 151 151 LEU LEU A . n A 1 133 LYS 133 152 152 LYS LYS A . n A 1 134 ASP 134 153 153 ASP ASP A . n A 1 135 ALA 135 154 154 ALA ALA A . n A 1 136 PHE 136 155 155 PHE PHE A . n A 1 137 PHE 137 156 156 PHE PHE A . n A 1 138 CYS 138 157 157 CYS CYS A . n A 1 139 LEU 139 158 158 LEU LEU A . n A 1 140 ARG 140 159 159 ARG ARG A . n A 1 141 LEU 141 160 160 LEU LEU A . n A 1 142 HIS 142 161 161 HIS HIS A . n A 1 143 PRO 143 162 162 PRO PRO A . n A 1 144 THR 144 163 163 THR THR A . n A 1 145 SER 145 164 164 SER SER A . n A 1 146 GLN 146 165 165 GLN GLN A . n A 1 147 PRO 147 166 166 PRO PRO A . n A 1 148 LEU 148 167 167 LEU LEU A . n A 1 149 PHE 149 168 168 PHE PHE A . n A 1 150 ALA 150 169 169 ALA ALA A . n A 1 151 PHE 151 170 170 PHE PHE A . n A 1 152 GLU 152 171 171 GLU GLU A . n A 1 153 TRP 153 172 172 TRP TRP A . n A 1 154 ARG 154 173 173 ARG ARG A . n A 1 155 ASP 155 174 174 ASP ASP A . n A 1 156 PRO 156 175 175 PRO PRO A . n A 1 157 GLU 157 176 176 GLU GLU A . n A 1 158 MET 158 177 177 MET MET A . n A 1 159 GLY 159 178 178 GLY GLY A . n A 1 160 ILE 160 179 179 ILE ILE A . n A 1 161 SER 161 180 180 SER SER A . n A 1 162 GLY 162 181 181 GLY GLY A . n A 1 163 GLN 163 182 182 GLN GLN A . n A 1 164 LEU 164 183 183 LEU LEU A . n A 1 165 THR 165 184 184 THR THR A . n A 1 166 TRP 166 185 185 TRP TRP A . n A 1 167 THR 167 186 186 THR THR A . n A 1 168 ARG 168 187 187 ARG ARG A . n A 1 169 LEU 169 188 188 LEU LEU A . n A 1 170 PRO 170 189 189 PRO PRO A . n A 1 171 GLN 171 190 190 GLN GLN A . n A 1 172 GLY 172 191 191 GLY GLY A . n A 1 173 PHE 173 192 192 PHE PHE A . n A 1 174 LYS 174 193 193 LYS LYS A . n A 1 175 ASN 175 194 194 ASN ASN A . n A 1 176 SER 176 195 195 SER SER A . n A 1 177 PRO 177 196 196 PRO PRO A . n A 1 178 THR 178 197 197 THR THR A . n A 1 179 LEU 179 198 198 LEU LEU A . n A 1 180 PHE 180 199 199 PHE PHE A . n A 1 181 ASP 181 200 200 ASP ASP A . n A 1 182 GLU 182 201 201 GLU GLU A . n A 1 183 ALA 183 202 202 ALA ALA A . n A 1 184 LEU 184 203 203 LEU LEU A . n A 1 185 HIS 185 204 204 HIS HIS A . n A 1 186 ARG 186 205 205 ARG ARG A . n A 1 187 ASP 187 206 206 ASP ASP A . n A 1 188 LEU 188 207 207 LEU LEU A . n A 1 189 ALA 189 208 208 ALA ALA A . n A 1 190 ASP 190 209 209 ASP ASP A . n A 1 191 PHE 191 210 210 PHE PHE A . n A 1 192 ARG 192 211 211 ARG ARG A . n A 1 193 ILE 193 212 212 ILE ILE A . n A 1 194 GLN 194 213 213 GLN GLN A . n A 1 195 HIS 195 214 214 HIS HIS A . n A 1 196 PRO 196 215 215 PRO PRO A . n A 1 197 ASP 197 216 216 ASP ASP A . n A 1 198 LEU 198 217 217 LEU LEU A . n A 1 199 ILE 199 218 218 ILE ILE A . n A 1 200 LEU 200 219 219 LEU LEU A . n A 1 201 LEU 201 220 220 LEU LEU A . n A 1 202 GLN 202 221 221 GLN GLN A . n A 1 203 TYR 203 222 222 TYR TYR A . n A 1 204 VAL 204 223 223 VAL VAL A . n A 1 205 ASP 205 224 224 ASP ASP A . n A 1 206 ASP 206 225 225 ASP ASP A . n A 1 207 LEU 207 226 226 LEU LEU A . n A 1 208 LEU 208 227 227 LEU LEU A . n A 1 209 LEU 209 228 228 LEU LEU A . n A 1 210 ALA 210 229 229 ALA ALA A . n A 1 211 ALA 211 230 230 ALA ALA A . n A 1 212 THR 212 231 231 THR THR A . n A 1 213 SER 213 232 232 SER SER A . n A 1 214 GLU 214 233 233 GLU GLU A . n A 1 215 LEU 215 234 234 LEU LEU A . n A 1 216 ASP 216 235 235 ASP ASP A . n A 1 217 CYS 217 236 236 CYS CYS A . n A 1 218 GLN 218 237 237 GLN GLN A . n A 1 219 GLN 219 238 238 GLN GLN A . n A 1 220 GLY 220 239 239 GLY GLY A . n A 1 221 THR 221 240 240 THR THR A . n A 1 222 ARG 222 241 241 ARG ARG A . n A 1 223 ALA 223 242 242 ALA ALA A . n A 1 224 LEU 224 243 243 LEU LEU A . n A 1 225 LEU 225 244 244 LEU LEU A . n A 1 226 GLN 226 245 245 GLN GLN A . n A 1 227 THR 227 246 246 THR THR A . n A 1 228 LEU 228 247 247 LEU LEU A . n A 1 229 GLY 229 248 248 GLY GLY A . n A 1 230 ASN 230 249 249 ASN ASN A . n A 1 231 LEU 231 250 250 LEU LEU A . n A 1 232 GLY 232 251 251 GLY GLY A . n A 1 233 TYR 233 252 252 TYR TYR A . n A 1 234 ARG 234 253 253 ARG ARG A . n A 1 235 ALA 235 254 254 ALA ALA A . n A 1 236 SER 236 255 255 SER SER A . n A 1 237 ALA 237 256 256 ALA ALA A . n A 1 238 LYS 238 257 257 LYS LYS A . n A 1 239 LYS 239 258 258 LYS LYS A . n A 1 240 ALA 240 259 259 ALA ALA A . n A 1 241 GLN 241 260 260 GLN GLN A . n A 1 242 ILE 242 261 261 ILE ILE A . n A 1 243 CYS 243 262 262 CYS CYS A . n A 1 244 GLN 244 263 263 GLN GLN A . n A 1 245 LYS 245 264 264 LYS LYS A . n A 1 246 GLN 246 265 265 GLN GLN A . n A 1 247 VAL 247 266 266 VAL VAL A . n A 1 248 LYS 248 267 267 LYS LYS A . n A 1 249 TYR 249 268 268 TYR TYR A . n A 1 250 LEU 250 269 269 LEU LEU A . n A 1 251 GLY 251 270 270 GLY GLY A . n A 1 252 TYR 252 271 271 TYR TYR A . n A 1 253 LEU 253 272 272 LEU LEU A . n A 1 254 LEU 254 273 273 LEU LEU A . n A 1 255 LYS 255 274 274 LYS LYS A . n A 1 256 GLU 256 275 275 GLU GLU A . n A 1 257 GLY 257 276 276 GLY GLY A . n A 1 258 GLN 258 277 277 GLN GLN A . n A 1 259 ARG 259 278 278 ARG ARG A . n B 2 1 DC 1 1 1 DC DC B . n B 2 2 DT 2 2 2 DT DT B . n B 2 3 DT 3 3 3 DT DT B . n B 2 4 DA 4 4 4 DA DA B . n B 2 5 DT 5 5 5 DT DT B . n B 2 6 1WA 6 6 6 1WA DP B . n B 2 7 1WA 7 7 7 1WA DP B . n B 2 8 DT 8 8 8 DT DT B . n C 3 1 DA 1 9 9 DA DA G . n C 3 2 1W5 2 10 10 1W5 DZ G . n C 3 3 1W5 3 11 11 1W5 DZ G . n C 3 4 DA 4 12 12 DA DA G . n C 3 5 DT 5 13 13 DT DT G . n C 3 6 DA 6 14 14 DA DA G . n C 3 7 DA 7 15 15 DA DA G . n C 3 8 DG 8 16 16 DG DG G . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 HOH 1 301 83 HOH HOH A . D 4 HOH 2 302 122 HOH HOH A . D 4 HOH 3 303 105 HOH HOH A . D 4 HOH 4 304 66 HOH HOH A . D 4 HOH 5 305 154 HOH HOH A . D 4 HOH 6 306 166 HOH HOH A . D 4 HOH 7 307 117 HOH HOH A . D 4 HOH 8 308 196 HOH HOH A . D 4 HOH 9 309 207 HOH HOH A . D 4 HOH 10 310 103 HOH HOH A . D 4 HOH 11 311 182 HOH HOH A . D 4 HOH 12 312 32 HOH HOH A . D 4 HOH 13 313 112 HOH HOH A . D 4 HOH 14 314 219 HOH HOH A . D 4 HOH 15 315 93 HOH HOH A . D 4 HOH 16 316 96 HOH HOH A . D 4 HOH 17 317 21 HOH HOH A . D 4 HOH 18 318 89 HOH HOH A . D 4 HOH 19 319 121 HOH HOH A . D 4 HOH 20 320 6 HOH HOH A . D 4 HOH 21 321 39 HOH HOH A . D 4 HOH 22 322 71 HOH HOH A . D 4 HOH 23 323 12 HOH HOH A . D 4 HOH 24 324 215 HOH HOH A . D 4 HOH 25 325 2 HOH HOH A . D 4 HOH 26 326 221 HOH HOH A . D 4 HOH 27 327 27 HOH HOH A . D 4 HOH 28 328 8 HOH HOH A . D 4 HOH 29 329 186 HOH HOH A . D 4 HOH 30 330 4 HOH HOH A . D 4 HOH 31 331 175 HOH HOH A . D 4 HOH 32 332 54 HOH HOH A . D 4 HOH 33 333 90 HOH HOH A . D 4 HOH 34 334 91 HOH HOH A . D 4 HOH 35 335 22 HOH HOH A . D 4 HOH 36 336 197 HOH HOH A . D 4 HOH 37 337 51 HOH HOH A . D 4 HOH 38 338 37 HOH HOH A . D 4 HOH 39 339 205 HOH HOH A . D 4 HOH 40 340 56 HOH HOH A . D 4 HOH 41 341 163 HOH HOH A . D 4 HOH 42 342 102 HOH HOH A . D 4 HOH 43 343 45 HOH HOH A . D 4 HOH 44 344 159 HOH HOH A . D 4 HOH 45 345 44 HOH HOH A . D 4 HOH 46 346 53 HOH HOH A . D 4 HOH 47 347 35 HOH HOH A . D 4 HOH 48 348 23 HOH HOH A . D 4 HOH 49 349 192 HOH HOH A . D 4 HOH 50 350 190 HOH HOH A . D 4 HOH 51 351 97 HOH HOH A . D 4 HOH 52 352 168 HOH HOH A . D 4 HOH 53 353 70 HOH HOH A . D 4 HOH 54 354 87 HOH HOH A . D 4 HOH 55 355 9 HOH HOH A . D 4 HOH 56 356 5 HOH HOH A . D 4 HOH 57 357 179 HOH HOH A . D 4 HOH 58 358 58 HOH HOH A . D 4 HOH 59 359 74 HOH HOH A . D 4 HOH 60 360 46 HOH HOH A . D 4 HOH 61 361 3 HOH HOH A . D 4 HOH 62 362 43 HOH HOH A . D 4 HOH 63 363 188 HOH HOH A . D 4 HOH 64 364 1 HOH HOH A . D 4 HOH 65 365 100 HOH HOH A . D 4 HOH 66 366 50 HOH HOH A . D 4 HOH 67 367 126 HOH HOH A . D 4 HOH 68 368 28 HOH HOH A . D 4 HOH 69 369 167 HOH HOH A . D 4 HOH 70 370 194 HOH HOH A . D 4 HOH 71 371 171 HOH HOH A . D 4 HOH 72 372 7 HOH HOH A . D 4 HOH 73 373 104 HOH HOH A . D 4 HOH 74 374 18 HOH HOH A . D 4 HOH 75 375 10 HOH HOH A . D 4 HOH 76 376 149 HOH HOH A . D 4 HOH 77 377 131 HOH HOH A . D 4 HOH 78 378 81 HOH HOH A . D 4 HOH 79 379 78 HOH HOH A . D 4 HOH 80 380 99 HOH HOH A . D 4 HOH 81 381 155 HOH HOH A . D 4 HOH 82 382 13 HOH HOH A . D 4 HOH 83 383 73 HOH HOH A . D 4 HOH 84 384 57 HOH HOH A . D 4 HOH 85 385 38 HOH HOH A . D 4 HOH 86 386 29 HOH HOH A . D 4 HOH 87 387 177 HOH HOH A . D 4 HOH 88 388 55 HOH HOH A . D 4 HOH 89 389 59 HOH HOH A . D 4 HOH 90 390 24 HOH HOH A . D 4 HOH 91 391 198 HOH HOH A . D 4 HOH 92 392 62 HOH HOH A . D 4 HOH 93 393 108 HOH HOH A . D 4 HOH 94 394 65 HOH HOH A . D 4 HOH 95 395 42 HOH HOH A . D 4 HOH 96 396 145 HOH HOH A . D 4 HOH 97 397 101 HOH HOH A . D 4 HOH 98 398 33 HOH HOH A . D 4 HOH 99 399 165 HOH HOH A . D 4 HOH 100 400 113 HOH HOH A . D 4 HOH 101 401 40 HOH HOH A . D 4 HOH 102 402 125 HOH HOH A . D 4 HOH 103 403 151 HOH HOH A . D 4 HOH 104 404 161 HOH HOH A . D 4 HOH 105 405 82 HOH HOH A . D 4 HOH 106 406 98 HOH HOH A . D 4 HOH 107 407 60 HOH HOH A . D 4 HOH 108 408 120 HOH HOH A . D 4 HOH 109 409 17 HOH HOH A . D 4 HOH 110 410 189 HOH HOH A . D 4 HOH 111 411 11 HOH HOH A . D 4 HOH 112 412 187 HOH HOH A . D 4 HOH 113 413 164 HOH HOH A . D 4 HOH 114 414 107 HOH HOH A . D 4 HOH 115 415 25 HOH HOH A . D 4 HOH 116 416 41 HOH HOH A . D 4 HOH 117 417 69 HOH HOH A . D 4 HOH 118 418 147 HOH HOH A . D 4 HOH 119 419 30 HOH HOH A . D 4 HOH 120 420 19 HOH HOH A . D 4 HOH 121 421 80 HOH HOH A . D 4 HOH 122 422 15 HOH HOH A . D 4 HOH 123 423 115 HOH HOH A . D 4 HOH 124 424 95 HOH HOH A . D 4 HOH 125 425 63 HOH HOH A . D 4 HOH 126 426 31 HOH HOH A . D 4 HOH 127 427 199 HOH HOH A . D 4 HOH 128 428 158 HOH HOH A . D 4 HOH 129 429 153 HOH HOH A . D 4 HOH 130 430 169 HOH HOH A . D 4 HOH 131 431 16 HOH HOH A . D 4 HOH 132 432 162 HOH HOH A . D 4 HOH 133 433 183 HOH HOH A . D 4 HOH 134 434 142 HOH HOH A . D 4 HOH 135 435 213 HOH HOH A . D 4 HOH 136 436 49 HOH HOH A . D 4 HOH 137 437 214 HOH HOH A . D 4 HOH 138 438 216 HOH HOH A . D 4 HOH 139 439 36 HOH HOH A . D 4 HOH 140 440 156 HOH HOH A . D 4 HOH 141 441 150 HOH HOH A . D 4 HOH 142 442 76 HOH HOH A . D 4 HOH 143 443 193 HOH HOH A . D 4 HOH 144 444 185 HOH HOH A . D 4 HOH 145 445 176 HOH HOH A . D 4 HOH 146 446 143 HOH HOH A . D 4 HOH 147 447 64 HOH HOH A . D 4 HOH 148 448 94 HOH HOH A . D 4 HOH 149 449 202 HOH HOH A . D 4 HOH 150 450 184 HOH HOH A . D 4 HOH 151 451 133 HOH HOH A . D 4 HOH 152 452 114 HOH HOH A . D 4 HOH 153 453 14 HOH HOH A . D 4 HOH 154 454 144 HOH HOH A . D 4 HOH 155 455 160 HOH HOH A . D 4 HOH 156 456 223 HOH HOH A . D 4 HOH 157 457 210 HOH HOH A . D 4 HOH 158 458 208 HOH HOH A . D 4 HOH 159 459 174 HOH HOH A . D 4 HOH 160 460 48 HOH HOH A . D 4 HOH 161 461 220 HOH HOH A . D 4 HOH 162 462 52 HOH HOH A . D 4 HOH 163 463 157 HOH HOH A . D 4 HOH 164 464 68 HOH HOH A . D 4 HOH 165 465 124 HOH HOH A . D 4 HOH 166 466 201 HOH HOH A . D 4 HOH 167 467 116 HOH HOH A . D 4 HOH 168 468 106 HOH HOH A . D 4 HOH 169 469 209 HOH HOH A . D 4 HOH 170 470 134 HOH HOH A . D 4 HOH 171 471 79 HOH HOH A . D 4 HOH 172 472 206 HOH HOH A . D 4 HOH 173 473 110 HOH HOH A . D 4 HOH 174 474 128 HOH HOH A . D 4 HOH 175 475 123 HOH HOH A . D 4 HOH 176 476 20 HOH HOH A . D 4 HOH 177 477 218 HOH HOH A . D 4 HOH 178 478 34 HOH HOH A . D 4 HOH 179 479 212 HOH HOH A . D 4 HOH 180 480 119 HOH HOH A . D 4 HOH 181 481 217 HOH HOH A . D 4 HOH 182 482 181 HOH HOH A . D 4 HOH 183 483 138 HOH HOH A . D 4 HOH 184 484 222 HOH HOH A . D 4 HOH 185 485 132 HOH HOH A . D 4 HOH 186 486 129 HOH HOH A . D 4 HOH 187 487 88 HOH HOH A . D 4 HOH 188 488 130 HOH HOH A . D 4 HOH 189 489 139 HOH HOH A . D 4 HOH 190 490 137 HOH HOH A . D 4 HOH 191 491 211 HOH HOH A . D 4 HOH 192 492 75 HOH HOH A . D 4 HOH 193 493 85 HOH HOH A . D 4 HOH 194 494 140 HOH HOH A . D 4 HOH 195 495 111 HOH HOH A . E 4 HOH 1 101 203 HOH HOH B . E 4 HOH 2 102 136 HOH HOH B . E 4 HOH 3 103 204 HOH HOH B . F 4 HOH 1 101 141 HOH HOH G . F 4 HOH 2 102 170 HOH HOH G . F 4 HOH 3 103 61 HOH HOH G . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALEPACK ? ? ? . 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.15 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.length_a 54.638 _cell.length_b 145.359 _cell.length_c 46.878 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 4XO0 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.entry_id 4XO0 _symmetry.Int_Tables_number 18 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 4XO0 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.93 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 58.06 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'PEG 4000' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 93 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 210' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2014-08-20 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97911 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 19-BM' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97911 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 19-BM _diffrn_source.pdbx_synchrotron_site APS # _reflns.d_resolution_high 1.700 _reflns.d_resolution_low 50.000 _reflns.pdbx_number_measured_all 178730 _reflns.number_obs 41362 _reflns.pdbx_Rmerge_I_obs 0.054 _reflns.pdbx_netI_over_av_sigmaI 24.254 _reflns.pdbx_netI_over_sigmaI 15.000 _reflns.pdbx_chi_squared 1.078 _reflns.pdbx_redundancy 5.000 _reflns.percent_possible_obs 99.300 _reflns.pdbx_Rrim_I_all 0.060 _reflns.pdbx_Rpim_I_all 0.026 _reflns.B_iso_Wilson_estimate 21.970 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4XO0 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? # loop_ _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.pdbx_rejects _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.meanI_over_sigI_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_CC_half 1 1 1.800 1.830 ? ? ? 0 0.420 ? ? 0.882 3.800 ? ? ? 1696 ? ? ? ? 96.700 0.484 0.235 0.882 1 2 1.830 1.860 ? ? ? 0 0.374 ? ? 0.907 4.000 ? ? ? 1713 ? ? ? ? 98.400 0.429 0.204 0.909 1 3 1.860 1.900 ? ? ? 0 0.313 ? ? 0.933 4.200 ? ? ? 1753 ? ? ? ? 98.600 0.357 0.168 0.924 1 4 1.900 1.940 ? ? ? 0 0.260 ? ? 0.957 4.500 ? ? ? 1751 ? ? ? ? 99.600 0.294 0.134 0.955 1 5 1.940 1.980 ? ? ? 0 0.205 ? ? 0.989 4.700 ? ? ? 1739 ? ? ? ? 99.800 0.231 0.104 0.970 1 6 1.980 2.030 ? ? ? 0 0.170 ? ? 1.033 4.700 ? ? ? 1773 ? ? ? ? 99.900 0.191 0.086 0.980 1 7 2.030 2.080 ? ? ? 0 0.149 ? ? 1.119 4.800 ? ? ? 1750 ? ? ? ? 100.000 0.167 0.074 0.982 1 8 2.080 2.130 ? ? ? 0 0.130 ? ? 1.173 4.900 ? ? ? 1789 ? ? ? ? 100.000 0.146 0.064 0.988 1 9 2.130 2.200 ? ? ? 0 0.118 ? ? 1.160 5.000 ? ? ? 1757 ? ? ? ? 99.800 0.131 0.057 0.991 1 10 2.200 2.270 ? ? ? 0 0.102 ? ? 1.192 5.200 ? ? ? 1763 ? ? ? ? 100.000 0.113 0.048 0.991 1 11 2.270 2.350 ? ? ? 0 0.089 ? ? 1.156 5.300 ? ? ? 1777 ? ? ? ? 99.900 0.099 0.042 0.994 1 12 2.350 2.440 ? ? ? 0 0.079 ? ? 1.181 5.500 ? ? ? 1774 ? ? ? ? 99.900 0.087 0.036 0.995 1 13 2.440 2.550 ? ? ? 0 0.070 ? ? 1.097 5.500 ? ? ? 1763 ? ? ? ? 99.900 0.077 0.032 0.996 1 14 2.550 2.690 ? ? ? 0 0.066 ? ? 1.102 5.600 ? ? ? 1786 ? ? ? ? 99.800 0.072 0.030 0.996 1 15 2.690 2.860 ? ? ? 0 0.057 ? ? 1.090 5.600 ? ? ? 1803 ? ? ? ? 99.900 0.063 0.026 0.997 1 16 2.860 3.080 ? ? ? 0 0.049 ? ? 1.133 5.600 ? ? ? 1794 ? ? ? ? 99.900 0.054 0.022 0.997 1 17 3.080 3.390 ? ? ? 0 0.046 ? ? 1.122 5.600 ? ? ? 1826 ? ? ? ? 99.800 0.051 0.021 0.998 1 18 3.390 3.880 ? ? ? 0 0.039 ? ? 1.059 5.500 ? ? ? 1816 ? ? ? ? 99.900 0.043 0.018 0.998 1 19 3.880 4.880 ? ? ? 0 0.034 ? ? 1.043 5.400 ? ? ? 1847 ? ? ? ? 99.800 0.037 0.015 0.999 1 20 4.880 50.000 ? ? ? 0 0.041 ? ? 1.025 5.000 ? ? ? 1879 ? ? ? ? 95.000 0.046 0.020 0.996 # _refine.entry_id 4XO0 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_d_res_high 1.7000 _refine.ls_d_res_low 30.2580 _refine.pdbx_ls_sigma_F 1.350 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 98.4800 _refine.ls_number_reflns_obs 41362 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.ls_matrix_type ? _refine.pdbx_R_Free_selection_details ? _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2206 _refine.ls_R_factor_R_work 0.2196 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2405 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.0500 _refine.ls_number_reflns_R_free 2087 _refine.ls_number_reflns_R_work 39275 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 31.8000 _refine.solvent_model_param_bsol 41.4120 _refine.solvent_model_param_ksol 0.3770 _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 3.8911 _refine.aniso_B[2][2] -0.4781 _refine.aniso_B[3][3] -3.4131 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][3] -0.0000 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.2300 _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.8473 _refine.B_iso_max 90.370 _refine.B_iso_min 9.770 _refine.pdbx_overall_phase_error 22.1700 _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_R_factor_R_free_error_details ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 1.7000 _refine_hist.d_res_low 30.2580 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 201 _refine_hist.number_atoms_total 2521 _refine_hist.pdbx_number_residues_total 264 _refine_hist.pdbx_B_iso_mean_solvent 30.62 _refine_hist.pdbx_number_atoms_protein 1989 _refine_hist.pdbx_number_atoms_nucleic_acid 331 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' f_bond_d 2444 0.008 ? ? ? 'X-RAY DIFFRACTION' f_angle_d 3376 1.168 ? ? ? 'X-RAY DIFFRACTION' f_chiral_restr 362 0.080 ? ? ? 'X-RAY DIFFRACTION' f_plane_restr 386 0.007 ? ? ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 961 19.800 ? ? ? # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.pdbx_refine_id _refine_ls_shell.R_factor_obs 1.7000 1.7396 15 91.0000 2362 . 0.2591 0.2921 . 133 . 2495 . 'X-RAY DIFFRACTION' . 1.7396 1.7831 15 95.0000 2481 . 0.2445 0.2612 . 144 . 2625 . 'X-RAY DIFFRACTION' . 1.7831 1.8313 15 97.0000 2524 . 0.2352 0.2918 . 136 . 2660 . 'X-RAY DIFFRACTION' . 1.8313 1.8851 15 98.0000 2607 . 0.2259 0.2521 . 138 . 2745 . 'X-RAY DIFFRACTION' . 1.8851 1.9460 15 100.0000 2599 . 0.2180 0.2511 . 150 . 2749 . 'X-RAY DIFFRACTION' . 1.9460 2.0155 15 100.0000 2597 . 0.2096 0.2428 . 143 . 2740 . 'X-RAY DIFFRACTION' . 2.0155 2.0962 15 100.0000 2631 . 0.2033 0.2338 . 136 . 2767 . 'X-RAY DIFFRACTION' . 2.0962 2.1916 15 100.0000 2666 . 0.2109 0.2058 . 119 . 2785 . 'X-RAY DIFFRACTION' . 2.1916 2.3071 15 100.0000 2632 . 0.2157 0.2515 . 140 . 2772 . 'X-RAY DIFFRACTION' . 2.3071 2.4515 15 100.0000 2659 . 0.2170 0.2400 . 124 . 2783 . 'X-RAY DIFFRACTION' . 2.4515 2.6407 15 100.0000 2666 . 0.2225 0.2357 . 141 . 2807 . 'X-RAY DIFFRACTION' . 2.6407 2.9063 15 100.0000 2665 . 0.2320 0.2395 . 146 . 2811 . 'X-RAY DIFFRACTION' . 2.9063 3.3264 15 100.0000 2686 . 0.2300 0.2505 . 135 . 2821 . 'X-RAY DIFFRACTION' . 3.3264 4.1891 15 100.0000 2719 . 0.2004 0.2312 . 155 . 2874 . 'X-RAY DIFFRACTION' . 4.1891 30.2631 15 97.0000 2781 . 0.2024 0.2111 . 147 . 2928 . 'X-RAY DIFFRACTION' . # _struct.entry_id 4XO0 _struct.title ;Crystal structure of 5'-CTTATPPTAZZATAAG in a host-guest complex ; _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 4XO0 _struct_keywords.text 'host-guest complex, B-DNA, non-natural nucleobase pair, synthetic biology, TRANSFERASE-DNA complex' _struct_keywords.pdbx_keywords TRANSFERASE/DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP POL_MLVMS P03355 ? 1 ;TWLSDFPQAWAETGGMGLAVRQAPLIIPLKATSTPVSIKQYPMSQEARLGIKPHIQRLLDQGILVPCQSPWNTPLLPVKK PGTNDYRPVQDLREVNKRVEDIHPTVPNPYNLLSGLPPSHQWYTVLDLKDAFFCLRLHPTSQPLFAFEWRDPEMGISGQL TWTRLPQGFKNSPTLFDEALHRDLADFRIQHPDLILLQYVDDLLLAATSELDCQQGTRALLQTLGNLGYRASAKKAQICQ KQVKYLGYLLKEGQR ; 683 2 PDB 4XO0 4XO0 ? 2 ? 1 3 PDB 4XO0 4XO0 ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4XO0 A 5 ? 259 ? P03355 683 ? 937 ? 24 278 2 2 4XO0 B 1 ? 8 ? 4XO0 1 ? 8 ? 1 8 3 3 4XO0 G 1 ? 8 ? 4XO0 9 ? 16 ? 9 16 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4XO0 GLY A 1 ? UNP P03355 ? ? 'expression tag' 20 1 1 4XO0 SER A 2 ? UNP P03355 ? ? 'expression tag' 21 2 1 4XO0 HIS A 3 ? UNP P03355 ? ? 'expression tag' 22 3 1 4XO0 MET A 4 ? UNP P03355 ? ? 'expression tag' 23 4 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1550 ? 1 MORE 1 ? 1 'SSA (A^2)' 15100 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 5 ? PHE A 10 ? THR A 24 PHE A 29 1 ? 6 HELX_P HELX_P2 AA2 TRP A 14 ? GLY A 19 ? TRP A 33 GLY A 38 1 ? 6 HELX_P HELX_P3 AA3 SER A 48 ? GLN A 65 ? SER A 67 GLN A 84 1 ? 18 HELX_P HELX_P4 AA4 LEU A 96 ? LYS A 101 ? LEU A 115 LYS A 120 1 ? 6 HELX_P HELX_P5 AA5 ASN A 112 ? SER A 118 ? ASN A 131 SER A 137 1 ? 7 HELX_P HELX_P6 AA6 ALA A 135 ? LEU A 139 ? ALA A 154 LEU A 158 5 ? 5 HELX_P HELX_P7 AA7 SER A 145 ? ALA A 150 ? SER A 164 ALA A 169 5 ? 6 HELX_P HELX_P8 AA8 PRO A 156 ? GLY A 159 ? PRO A 175 GLY A 178 5 ? 4 HELX_P HELX_P9 AA9 ASN A 175 ? HIS A 195 ? ASN A 194 HIS A 214 1 ? 21 HELX_P HELX_P10 AB1 SER A 213 ? GLY A 232 ? SER A 232 GLY A 251 1 ? 20 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B DT 5 "O3'" ? ? ? 1_555 B 1WA 6 P ? ? B DT 5 B 1WA 6 1_555 ? ? ? ? ? ? ? 1.588 ? ? covale2 covale both ? B 1WA 6 "O3'" ? ? ? 1_555 B 1WA 7 P ? ? B 1WA 6 B 1WA 7 1_555 ? ? ? ? ? ? ? 1.587 ? ? covale3 covale both ? B 1WA 7 "O3'" ? ? ? 1_555 B DT 8 P ? ? B 1WA 7 B DT 8 1_555 ? ? ? ? ? ? ? 1.587 ? ? covale4 covale both ? C DA 1 "O3'" ? ? ? 1_555 C 1W5 2 P ? ? G DA 9 G 1W5 10 1_555 ? ? ? ? ? ? ? 1.588 ? ? covale5 covale one ? C 1W5 2 "O3'" ? ? ? 1_555 C 1W5 3 P ? ? G 1W5 10 G 1W5 11 1_555 ? ? ? ? ? ? ? 1.589 ? ? covale6 covale one ? C 1W5 3 "O3'" ? ? ? 1_555 C DA 4 P ? ? G 1W5 11 G DA 12 1_555 ? ? ? ? ? ? ? 1.587 ? ? hydrog1 hydrog ? ? B DC 1 N3 ? ? ? 1_555 C DG 8 N1 ? ? B DC 1 G DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DC 1 N4 ? ? ? 1_555 C DG 8 O6 ? ? B DC 1 G DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DC 1 O2 ? ? ? 1_555 C DG 8 N2 ? ? B DC 1 G DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DT 2 N3 ? ? ? 1_555 C DA 7 N1 ? ? B DT 2 G DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DT 2 O4 ? ? ? 1_555 C DA 7 N6 ? ? B DT 2 G DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DT 3 N3 ? ? ? 1_555 C DA 6 N1 ? ? B DT 3 G DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DT 3 O4 ? ? ? 1_555 C DA 6 N6 ? ? B DT 3 G DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DA 4 N1 ? ? ? 1_555 C DT 5 N3 ? ? B DA 4 G DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DA 4 N6 ? ? ? 1_555 C DT 5 O4 ? ? B DA 4 G DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DT 5 N3 ? ? ? 1_555 C DA 4 N1 ? ? B DT 5 G DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DT 5 O4 ? ? ? 1_555 C DA 4 N6 ? ? B DT 5 G DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DT 8 N3 ? ? ? 1_555 C DA 1 N1 ? ? B DT 8 G DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DT 8 O4 ? ? ? 1_555 C DA 1 N6 ? ? B DT 8 G DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 3 ? AA2 ? 2 ? AA3 ? 4 ? AA4 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA2 1 2 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA4 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LEU A 68 ? CYS A 71 ? LEU A 87 CYS A 90 AA1 2 ILE A 160 ? TRP A 166 ? ILE A 179 TRP A 185 AA1 3 PHE A 151 ? ASP A 155 ? PHE A 170 ASP A 174 AA2 1 LEU A 79 ? PRO A 81 ? LEU A 98 PRO A 100 AA2 2 PRO A 92 ? GLN A 94 ? PRO A 111 GLN A 113 AA3 1 ILE A 199 ? TYR A 203 ? ILE A 218 TYR A 222 AA3 2 ASP A 206 ? ALA A 211 ? ASP A 225 ALA A 230 AA3 3 TRP A 126 ? ASP A 131 ? TRP A 145 ASP A 150 AA3 4 GLN A 241 ? GLN A 244 ? GLN A 260 GLN A 263 AA4 1 GLN A 246 ? TYR A 249 ? GLN A 265 TYR A 268 AA4 2 TYR A 252 ? LYS A 255 ? TYR A 271 LYS A 274 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N VAL A 69 ? N VAL A 88 O THR A 165 ? O THR A 184 AA1 2 3 O GLY A 162 ? O GLY A 181 N TRP A 153 ? N TRP A 172 AA2 1 2 N LEU A 80 ? N LEU A 99 O VAL A 93 ? O VAL A 112 AA3 1 2 N LEU A 201 ? N LEU A 220 O LEU A 208 ? O LEU A 227 AA3 2 3 O LEU A 207 ? O LEU A 226 N LEU A 130 ? N LEU A 149 AA3 3 4 N TYR A 127 ? N TYR A 146 O GLN A 244 ? O GLN A 263 AA4 1 2 N VAL A 247 ? N VAL A 266 O LEU A 254 ? O LEU A 273 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 "O3'" _pdbx_validate_symm_contact.auth_asym_id_1 B _pdbx_validate_symm_contact.auth_comp_id_1 DT _pdbx_validate_symm_contact.auth_seq_id_1 8 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 P _pdbx_validate_symm_contact.auth_asym_id_2 G _pdbx_validate_symm_contact.auth_comp_id_2 DA _pdbx_validate_symm_contact.auth_seq_id_2 9 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 2_475 _pdbx_validate_symm_contact.dist 1.60 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C3'" B DT 3 ? ? "C2'" B DT 3 ? ? "C1'" B DT 3 ? ? 97.59 102.40 -4.81 0.80 N 2 1 "O4'" B DT 5 ? ? "C1'" B DT 5 ? ? N1 B DT 5 ? ? 110.34 108.30 2.04 0.30 N 3 1 "C3'" B DT 5 ? ? "O3'" B DT 5 ? ? P B 1WA 6 ? ? 131.83 119.70 12.13 1.20 Y 4 1 "O3'" B DT 5 ? ? P B 1WA 6 ? ? OP2 B 1WA 6 ? ? 118.54 110.50 8.04 1.10 Y 5 1 "C3'" B 1WA 6 ? ? "O3'" B 1WA 6 ? ? P B 1WA 7 ? ? 129.59 119.70 9.89 1.20 Y 6 1 "O3'" B 1WA 6 ? ? P B 1WA 7 ? ? "O5'" B 1WA 7 ? ? 127.03 104.00 23.03 1.90 Y 7 1 "C3'" B 1WA 7 ? ? "O3'" B 1WA 7 ? ? P B DT 8 ? ? 127.98 119.70 8.28 1.20 Y 8 1 "O3'" B 1WA 7 ? ? P B DT 8 ? ? OP2 B DT 8 ? ? 83.13 105.20 -22.07 2.20 Y 9 1 "O3'" B 1WA 7 ? ? P B DT 8 ? ? OP1 B DT 8 ? ? 122.48 110.50 11.98 1.10 Y 10 1 "C3'" G 1W5 10 ? ? "O3'" G 1W5 10 ? ? P G 1W5 11 ? ? 108.15 119.70 -11.55 1.20 Y 11 1 "C3'" G 1W5 11 ? ? "O3'" G 1W5 11 ? ? P G DA 12 ? ? 136.45 119.70 16.75 1.20 Y 12 1 "O3'" G 1W5 11 ? ? P G DA 12 ? ? "O5'" G DA 12 ? ? 116.22 104.00 12.22 1.90 Y 13 1 "O3'" G 1W5 11 ? ? P G DA 12 ? ? OP2 G DA 12 ? ? 117.69 110.50 7.19 1.10 Y 14 1 "O3'" G 1W5 11 ? ? P G DA 12 ? ? OP1 G DA 12 ? ? 83.85 105.20 -21.35 2.20 Y 15 1 "O4'" G DA 15 ? ? "C1'" G DA 15 ? ? N9 G DA 15 ? ? 110.23 108.30 1.93 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 41 ? ? -164.29 118.96 2 1 VAL A 223 ? ? 55.21 -106.75 # _phasing.method MR # _pdbx_entry_details.compound_details ? _pdbx_entry_details.entry_id 4XO0 _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE FULL CRYSTALLIZED SEQUENCE FOR THE DNA CHAINS CORRESPONDS TO THE FOLLOWING SELF-COMPLEMENTARY 16-MER (DC)(DT)(DT)(DA)(DT)(1WA)(1WA)(DT)(DA)(1W5)(1W5)(DA)(DT)(DA)(DA)(DG) ; _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? A HOH 494 ? 5.84 . 2 1 O ? A HOH 495 ? 6.38 . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 20 ? A GLY 1 2 1 Y 1 A SER 21 ? A SER 2 3 1 Y 1 A HIS 22 ? A HIS 3 4 1 Y 1 A MET 23 ? A MET 4 5 1 Y 1 A LYS 102 ? A LYS 83 6 1 Y 1 A LYS 103 ? A LYS 84 7 1 Y 1 A PRO 104 ? A PRO 85 8 1 Y 1 A GLY 105 ? A GLY 86 9 1 Y 1 A THR 106 ? A THR 87 10 1 Y 1 A ASN 107 ? A ASN 88 11 1 Y 1 A ASP 108 ? A ASP 89 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 1W5 N N N N 1 1W5 P P N N 2 1W5 C1 C Y N 3 1W5 C2 C Y N 4 1W5 O2 O N N 5 1W5 N3 N Y N 6 1W5 C4 C Y N 7 1W5 N4 N N N 8 1W5 C5 C Y N 9 1W5 C6 C Y N 10 1W5 "C1'" C N R 11 1W5 "C2'" C N N 12 1W5 "C3'" C N S 13 1W5 "O3'" O N N 14 1W5 "C4'" C N R 15 1W5 "O4'" O N N 16 1W5 "C5'" C N N 17 1W5 "O5'" O N N 18 1W5 ON1 O N N 19 1W5 ON2 O N N 20 1W5 OP1 O N N 21 1W5 OP2 O N N 22 1W5 OP3 O N N 23 1W5 H1 H N N 24 1W5 H2 H N N 25 1W5 H4 H N N 26 1W5 H5 H N N 27 1W5 H6 H N N 28 1W5 H7 H N N 29 1W5 H8 H N N 30 1W5 H9 H N N 31 1W5 H10 H N N 32 1W5 H11 H N N 33 1W5 H12 H N N 34 1W5 HOP1 H N N 35 1W5 HOP3 H N N 36 1W5 H15 H N N 37 1WA OP3 O N N 38 1WA P P N N 39 1WA N1 N Y N 40 1WA C2 C Y N 41 1WA N2 N N N 42 1WA N3 N Y N 43 1WA C4 C Y N 44 1WA N5 N Y N 45 1WA C6 C Y N 46 1WA O6 O N N 47 1WA C7 C Y N 48 1WA C8 C Y N 49 1WA N9 N Y N 50 1WA "C1'" C N R 51 1WA "C2'" C N N 52 1WA "C3'" C N S 53 1WA "O3'" O N N 54 1WA "C4'" C N R 55 1WA "O4'" O N N 56 1WA "C5'" C N N 57 1WA "O5'" O N N 58 1WA OP1 O N N 59 1WA OP2 O N N 60 1WA HOP3 H N N 61 1WA HN2 H N N 62 1WA HN2A H N N 63 1WA HN3 H N N 64 1WA H7 H N N 65 1WA H8 H N N 66 1WA "H1'" H N N 67 1WA "H2'" H N N 68 1WA "H2'A" H N N 69 1WA "H3'" H N N 70 1WA "HO3'" H N N 71 1WA "H4'" H N N 72 1WA "H5'" H N N 73 1WA "H5'A" H N N 74 1WA HOP1 H N N 75 1WA HO6 H N N 76 ALA N N N N 77 ALA CA C N S 78 ALA C C N N 79 ALA O O N N 80 ALA CB C N N 81 ALA OXT O N N 82 ALA H H N N 83 ALA H2 H N N 84 ALA HA H N N 85 ALA HB1 H N N 86 ALA HB2 H N N 87 ALA HB3 H N N 88 ALA HXT H N N 89 ARG N N N N 90 ARG CA C N S 91 ARG C C N N 92 ARG O O N N 93 ARG CB C N N 94 ARG CG C N N 95 ARG CD C N N 96 ARG NE N N N 97 ARG CZ C N N 98 ARG NH1 N N N 99 ARG NH2 N N N 100 ARG OXT O N N 101 ARG H H N N 102 ARG H2 H N N 103 ARG HA H N N 104 ARG HB2 H N N 105 ARG HB3 H N N 106 ARG HG2 H N N 107 ARG HG3 H N N 108 ARG HD2 H N N 109 ARG HD3 H N N 110 ARG HE H N N 111 ARG HH11 H N N 112 ARG HH12 H N N 113 ARG HH21 H N N 114 ARG HH22 H N N 115 ARG HXT H N N 116 ASN N N N N 117 ASN CA C N S 118 ASN C C N N 119 ASN O O N N 120 ASN CB C N N 121 ASN CG C N N 122 ASN OD1 O N N 123 ASN ND2 N N N 124 ASN OXT O N N 125 ASN H H N N 126 ASN H2 H N N 127 ASN HA H N N 128 ASN HB2 H N N 129 ASN HB3 H N N 130 ASN HD21 H N N 131 ASN HD22 H N N 132 ASN HXT H N N 133 ASP N N N N 134 ASP CA C N S 135 ASP C C N N 136 ASP O O N N 137 ASP CB C N N 138 ASP CG C N N 139 ASP OD1 O N N 140 ASP OD2 O N N 141 ASP OXT O N N 142 ASP H H N N 143 ASP H2 H N N 144 ASP HA H N N 145 ASP HB2 H N N 146 ASP HB3 H N N 147 ASP HD2 H N N 148 ASP HXT H N N 149 CYS N N N N 150 CYS CA C N R 151 CYS C C N N 152 CYS O O N N 153 CYS CB C N N 154 CYS SG S N N 155 CYS OXT O N N 156 CYS H H N N 157 CYS H2 H N N 158 CYS HA H N N 159 CYS HB2 H N N 160 CYS HB3 H N N 161 CYS HG H N N 162 CYS HXT H N N 163 DA OP3 O N N 164 DA P P N N 165 DA OP1 O N N 166 DA OP2 O N N 167 DA "O5'" O N N 168 DA "C5'" C N N 169 DA "C4'" C N R 170 DA "O4'" O N N 171 DA "C3'" C N S 172 DA "O3'" O N N 173 DA "C2'" C N N 174 DA "C1'" C N R 175 DA N9 N Y N 176 DA C8 C Y N 177 DA N7 N Y N 178 DA C5 C Y N 179 DA C6 C Y N 180 DA N6 N N N 181 DA N1 N Y N 182 DA C2 C Y N 183 DA N3 N Y N 184 DA C4 C Y N 185 DA HOP3 H N N 186 DA HOP2 H N N 187 DA "H5'" H N N 188 DA "H5''" H N N 189 DA "H4'" H N N 190 DA "H3'" H N N 191 DA "HO3'" H N N 192 DA "H2'" H N N 193 DA "H2''" H N N 194 DA "H1'" H N N 195 DA H8 H N N 196 DA H61 H N N 197 DA H62 H N N 198 DA H2 H N N 199 DC OP3 O N N 200 DC P P N N 201 DC OP1 O N N 202 DC OP2 O N N 203 DC "O5'" O N N 204 DC "C5'" C N N 205 DC "C4'" C N R 206 DC "O4'" O N N 207 DC "C3'" C N S 208 DC "O3'" O N N 209 DC "C2'" C N N 210 DC "C1'" C N R 211 DC N1 N N N 212 DC C2 C N N 213 DC O2 O N N 214 DC N3 N N N 215 DC C4 C N N 216 DC N4 N N N 217 DC C5 C N N 218 DC C6 C N N 219 DC HOP3 H N N 220 DC HOP2 H N N 221 DC "H5'" H N N 222 DC "H5''" H N N 223 DC "H4'" H N N 224 DC "H3'" H N N 225 DC "HO3'" H N N 226 DC "H2'" H N N 227 DC "H2''" H N N 228 DC "H1'" H N N 229 DC H41 H N N 230 DC H42 H N N 231 DC H5 H N N 232 DC H6 H N N 233 DG OP3 O N N 234 DG P P N N 235 DG OP1 O N N 236 DG OP2 O N N 237 DG "O5'" O N N 238 DG "C5'" C N N 239 DG "C4'" C N R 240 DG "O4'" O N N 241 DG "C3'" C N S 242 DG "O3'" O N N 243 DG "C2'" C N N 244 DG "C1'" C N R 245 DG N9 N Y N 246 DG C8 C Y N 247 DG N7 N Y N 248 DG C5 C Y N 249 DG C6 C N N 250 DG O6 O N N 251 DG N1 N N N 252 DG C2 C N N 253 DG N2 N N N 254 DG N3 N N N 255 DG C4 C Y N 256 DG HOP3 H N N 257 DG HOP2 H N N 258 DG "H5'" H N N 259 DG "H5''" H N N 260 DG "H4'" H N N 261 DG "H3'" H N N 262 DG "HO3'" H N N 263 DG "H2'" H N N 264 DG "H2''" H N N 265 DG "H1'" H N N 266 DG H8 H N N 267 DG H1 H N N 268 DG H21 H N N 269 DG H22 H N N 270 DT OP3 O N N 271 DT P P N N 272 DT OP1 O N N 273 DT OP2 O N N 274 DT "O5'" O N N 275 DT "C5'" C N N 276 DT "C4'" C N R 277 DT "O4'" O N N 278 DT "C3'" C N S 279 DT "O3'" O N N 280 DT "C2'" C N N 281 DT "C1'" C N R 282 DT N1 N N N 283 DT C2 C N N 284 DT O2 O N N 285 DT N3 N N N 286 DT C4 C N N 287 DT O4 O N N 288 DT C5 C N N 289 DT C7 C N N 290 DT C6 C N N 291 DT HOP3 H N N 292 DT HOP2 H N N 293 DT "H5'" H N N 294 DT "H5''" H N N 295 DT "H4'" H N N 296 DT "H3'" H N N 297 DT "HO3'" H N N 298 DT "H2'" H N N 299 DT "H2''" H N N 300 DT "H1'" H N N 301 DT H3 H N N 302 DT H71 H N N 303 DT H72 H N N 304 DT H73 H N N 305 DT H6 H N N 306 GLN N N N N 307 GLN CA C N S 308 GLN C C N N 309 GLN O O N N 310 GLN CB C N N 311 GLN CG C N N 312 GLN CD C N N 313 GLN OE1 O N N 314 GLN NE2 N N N 315 GLN OXT O N N 316 GLN H H N N 317 GLN H2 H N N 318 GLN HA H N N 319 GLN HB2 H N N 320 GLN HB3 H N N 321 GLN HG2 H N N 322 GLN HG3 H N N 323 GLN HE21 H N N 324 GLN HE22 H N N 325 GLN HXT H N N 326 GLU N N N N 327 GLU CA C N S 328 GLU C C N N 329 GLU O O N N 330 GLU CB C N N 331 GLU CG C N N 332 GLU CD C N N 333 GLU OE1 O N N 334 GLU OE2 O N N 335 GLU OXT O N N 336 GLU H H N N 337 GLU H2 H N N 338 GLU HA H N N 339 GLU HB2 H N N 340 GLU HB3 H N N 341 GLU HG2 H N N 342 GLU HG3 H N N 343 GLU HE2 H N N 344 GLU HXT H N N 345 GLY N N N N 346 GLY CA C N N 347 GLY C C N N 348 GLY O O N N 349 GLY OXT O N N 350 GLY H H N N 351 GLY H2 H N N 352 GLY HA2 H N N 353 GLY HA3 H N N 354 GLY HXT H N N 355 HIS N N N N 356 HIS CA C N S 357 HIS C C N N 358 HIS O O N N 359 HIS CB C N N 360 HIS CG C Y N 361 HIS ND1 N Y N 362 HIS CD2 C Y N 363 HIS CE1 C Y N 364 HIS NE2 N Y N 365 HIS OXT O N N 366 HIS H H N N 367 HIS H2 H N N 368 HIS HA H N N 369 HIS HB2 H N N 370 HIS HB3 H N N 371 HIS HD1 H N N 372 HIS HD2 H N N 373 HIS HE1 H N N 374 HIS HE2 H N N 375 HIS HXT H N N 376 HOH O O N N 377 HOH H1 H N N 378 HOH H2 H N N 379 ILE N N N N 380 ILE CA C N S 381 ILE C C N N 382 ILE O O N N 383 ILE CB C N S 384 ILE CG1 C N N 385 ILE CG2 C N N 386 ILE CD1 C N N 387 ILE OXT O N N 388 ILE H H N N 389 ILE H2 H N N 390 ILE HA H N N 391 ILE HB H N N 392 ILE HG12 H N N 393 ILE HG13 H N N 394 ILE HG21 H N N 395 ILE HG22 H N N 396 ILE HG23 H N N 397 ILE HD11 H N N 398 ILE HD12 H N N 399 ILE HD13 H N N 400 ILE HXT H N N 401 LEU N N N N 402 LEU CA C N S 403 LEU C C N N 404 LEU O O N N 405 LEU CB C N N 406 LEU CG C N N 407 LEU CD1 C N N 408 LEU CD2 C N N 409 LEU OXT O N N 410 LEU H H N N 411 LEU H2 H N N 412 LEU HA H N N 413 LEU HB2 H N N 414 LEU HB3 H N N 415 LEU HG H N N 416 LEU HD11 H N N 417 LEU HD12 H N N 418 LEU HD13 H N N 419 LEU HD21 H N N 420 LEU HD22 H N N 421 LEU HD23 H N N 422 LEU HXT H N N 423 LYS N N N N 424 LYS CA C N S 425 LYS C C N N 426 LYS O O N N 427 LYS CB C N N 428 LYS CG C N N 429 LYS CD C N N 430 LYS CE C N N 431 LYS NZ N N N 432 LYS OXT O N N 433 LYS H H N N 434 LYS H2 H N N 435 LYS HA H N N 436 LYS HB2 H N N 437 LYS HB3 H N N 438 LYS HG2 H N N 439 LYS HG3 H N N 440 LYS HD2 H N N 441 LYS HD3 H N N 442 LYS HE2 H N N 443 LYS HE3 H N N 444 LYS HZ1 H N N 445 LYS HZ2 H N N 446 LYS HZ3 H N N 447 LYS HXT H N N 448 MET N N N N 449 MET CA C N S 450 MET C C N N 451 MET O O N N 452 MET CB C N N 453 MET CG C N N 454 MET SD S N N 455 MET CE C N N 456 MET OXT O N N 457 MET H H N N 458 MET H2 H N N 459 MET HA H N N 460 MET HB2 H N N 461 MET HB3 H N N 462 MET HG2 H N N 463 MET HG3 H N N 464 MET HE1 H N N 465 MET HE2 H N N 466 MET HE3 H N N 467 MET HXT H N N 468 PHE N N N N 469 PHE CA C N S 470 PHE C C N N 471 PHE O O N N 472 PHE CB C N N 473 PHE CG C Y N 474 PHE CD1 C Y N 475 PHE CD2 C Y N 476 PHE CE1 C Y N 477 PHE CE2 C Y N 478 PHE CZ C Y N 479 PHE OXT O N N 480 PHE H H N N 481 PHE H2 H N N 482 PHE HA H N N 483 PHE HB2 H N N 484 PHE HB3 H N N 485 PHE HD1 H N N 486 PHE HD2 H N N 487 PHE HE1 H N N 488 PHE HE2 H N N 489 PHE HZ H N N 490 PHE HXT H N N 491 PRO N N N N 492 PRO CA C N S 493 PRO C C N N 494 PRO O O N N 495 PRO CB C N N 496 PRO CG C N N 497 PRO CD C N N 498 PRO OXT O N N 499 PRO H H N N 500 PRO HA H N N 501 PRO HB2 H N N 502 PRO HB3 H N N 503 PRO HG2 H N N 504 PRO HG3 H N N 505 PRO HD2 H N N 506 PRO HD3 H N N 507 PRO HXT H N N 508 SER N N N N 509 SER CA C N S 510 SER C C N N 511 SER O O N N 512 SER CB C N N 513 SER OG O N N 514 SER OXT O N N 515 SER H H N N 516 SER H2 H N N 517 SER HA H N N 518 SER HB2 H N N 519 SER HB3 H N N 520 SER HG H N N 521 SER HXT H N N 522 THR N N N N 523 THR CA C N S 524 THR C C N N 525 THR O O N N 526 THR CB C N R 527 THR OG1 O N N 528 THR CG2 C N N 529 THR OXT O N N 530 THR H H N N 531 THR H2 H N N 532 THR HA H N N 533 THR HB H N N 534 THR HG1 H N N 535 THR HG21 H N N 536 THR HG22 H N N 537 THR HG23 H N N 538 THR HXT H N N 539 TRP N N N N 540 TRP CA C N S 541 TRP C C N N 542 TRP O O N N 543 TRP CB C N N 544 TRP CG C Y N 545 TRP CD1 C Y N 546 TRP CD2 C Y N 547 TRP NE1 N Y N 548 TRP CE2 C Y N 549 TRP CE3 C Y N 550 TRP CZ2 C Y N 551 TRP CZ3 C Y N 552 TRP CH2 C Y N 553 TRP OXT O N N 554 TRP H H N N 555 TRP H2 H N N 556 TRP HA H N N 557 TRP HB2 H N N 558 TRP HB3 H N N 559 TRP HD1 H N N 560 TRP HE1 H N N 561 TRP HE3 H N N 562 TRP HZ2 H N N 563 TRP HZ3 H N N 564 TRP HH2 H N N 565 TRP HXT H N N 566 TYR N N N N 567 TYR CA C N S 568 TYR C C N N 569 TYR O O N N 570 TYR CB C N N 571 TYR CG C Y N 572 TYR CD1 C Y N 573 TYR CD2 C Y N 574 TYR CE1 C Y N 575 TYR CE2 C Y N 576 TYR CZ C Y N 577 TYR OH O N N 578 TYR OXT O N N 579 TYR H H N N 580 TYR H2 H N N 581 TYR HA H N N 582 TYR HB2 H N N 583 TYR HB3 H N N 584 TYR HD1 H N N 585 TYR HD2 H N N 586 TYR HE1 H N N 587 TYR HE2 H N N 588 TYR HH H N N 589 TYR HXT H N N 590 VAL N N N N 591 VAL CA C N S 592 VAL C C N N 593 VAL O O N N 594 VAL CB C N N 595 VAL CG1 C N N 596 VAL CG2 C N N 597 VAL OXT O N N 598 VAL H H N N 599 VAL H2 H N N 600 VAL HA H N N 601 VAL HB H N N 602 VAL HG11 H N N 603 VAL HG12 H N N 604 VAL HG13 H N N 605 VAL HG21 H N N 606 VAL HG22 H N N 607 VAL HG23 H N N 608 VAL HXT H N N 609 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 1W5 "O3'" "C3'" sing N N 1 1W5 N4 C4 sing N N 2 1W5 "C3'" "C2'" sing N N 3 1W5 "C3'" "C4'" sing N N 4 1W5 "C2'" "C1'" sing N N 5 1W5 N3 C4 doub Y N 6 1W5 N3 C2 sing Y N 7 1W5 O2 C2 sing N N 8 1W5 C4 C5 sing Y N 9 1W5 C2 C1 doub Y N 10 1W5 ON1 N doub N N 11 1W5 C5 N sing N N 12 1W5 C5 C6 doub Y N 13 1W5 C1 C6 sing Y N 14 1W5 C1 "C1'" sing N N 15 1W5 N ON2 sing N N 16 1W5 OP2 P doub N N 17 1W5 "C1'" "O4'" sing N N 18 1W5 "O5'" P sing N N 19 1W5 "O5'" "C5'" sing N N 20 1W5 "C4'" "C5'" sing N N 21 1W5 "C4'" "O4'" sing N N 22 1W5 P OP1 sing N N 23 1W5 P OP3 sing N N 24 1W5 N4 H1 sing N N 25 1W5 N4 H2 sing N N 26 1W5 C6 H4 sing N N 27 1W5 "C1'" H5 sing N N 28 1W5 "C2'" H6 sing N N 29 1W5 "C2'" H7 sing N N 30 1W5 "C3'" H8 sing N N 31 1W5 "O3'" H9 sing N N 32 1W5 "C4'" H10 sing N N 33 1W5 "C5'" H11 sing N N 34 1W5 "C5'" H12 sing N N 35 1W5 OP1 HOP1 sing N N 36 1W5 OP3 HOP3 sing N N 37 1W5 O2 H15 sing N N 38 1WA P OP3 sing N N 39 1WA OP3 HOP3 sing N N 40 1WA OP2 P doub N N 41 1WA "O5'" P sing N N 42 1WA P OP1 sing N N 43 1WA C2 N1 doub Y N 44 1WA N1 C6 sing Y N 45 1WA N2 C2 sing N N 46 1WA C2 N3 sing Y N 47 1WA N2 HN2 sing N N 48 1WA N2 HN2A sing N N 49 1WA N3 C4 sing Y N 50 1WA N3 HN3 sing N N 51 1WA C4 N5 sing Y N 52 1WA C4 N9 doub Y N 53 1WA C6 N5 doub Y N 54 1WA N5 C7 sing Y N 55 1WA C6 O6 sing N N 56 1WA C7 C8 doub Y N 57 1WA C7 H7 sing N N 58 1WA N9 C8 sing Y N 59 1WA C8 H8 sing N N 60 1WA N9 "C1'" sing N N 61 1WA "C2'" "C1'" sing N N 62 1WA "C1'" "O4'" sing N N 63 1WA "C1'" "H1'" sing N N 64 1WA "C2'" "C3'" sing N N 65 1WA "C2'" "H2'" sing N N 66 1WA "C2'" "H2'A" sing N N 67 1WA "O3'" "C3'" sing N N 68 1WA "C3'" "C4'" sing N N 69 1WA "C3'" "H3'" sing N N 70 1WA "O3'" "HO3'" sing N N 71 1WA "C4'" "O4'" sing N N 72 1WA "C4'" "C5'" sing N N 73 1WA "C4'" "H4'" sing N N 74 1WA "O5'" "C5'" sing N N 75 1WA "C5'" "H5'" sing N N 76 1WA "C5'" "H5'A" sing N N 77 1WA OP1 HOP1 sing N N 78 1WA O6 HO6 sing N N 79 ALA N CA sing N N 80 ALA N H sing N N 81 ALA N H2 sing N N 82 ALA CA C sing N N 83 ALA CA CB sing N N 84 ALA CA HA sing N N 85 ALA C O doub N N 86 ALA C OXT sing N N 87 ALA CB HB1 sing N N 88 ALA CB HB2 sing N N 89 ALA CB HB3 sing N N 90 ALA OXT HXT sing N N 91 ARG N CA sing N N 92 ARG N H sing N N 93 ARG N H2 sing N N 94 ARG CA C sing N N 95 ARG CA CB sing N N 96 ARG CA HA sing N N 97 ARG C O doub N N 98 ARG C OXT sing N N 99 ARG CB CG sing N N 100 ARG CB HB2 sing N N 101 ARG CB HB3 sing N N 102 ARG CG CD sing N N 103 ARG CG HG2 sing N N 104 ARG CG HG3 sing N N 105 ARG CD NE sing N N 106 ARG CD HD2 sing N N 107 ARG CD HD3 sing N N 108 ARG NE CZ sing N N 109 ARG NE HE sing N N 110 ARG CZ NH1 sing N N 111 ARG CZ NH2 doub N N 112 ARG NH1 HH11 sing N N 113 ARG NH1 HH12 sing N N 114 ARG NH2 HH21 sing N N 115 ARG NH2 HH22 sing N N 116 ARG OXT HXT sing N N 117 ASN N CA sing N N 118 ASN N H sing N N 119 ASN N H2 sing N N 120 ASN CA C sing N N 121 ASN CA CB sing N N 122 ASN CA HA sing N N 123 ASN C O doub N N 124 ASN C OXT sing N N 125 ASN CB CG sing N N 126 ASN CB HB2 sing N N 127 ASN CB HB3 sing N N 128 ASN CG OD1 doub N N 129 ASN CG ND2 sing N N 130 ASN ND2 HD21 sing N N 131 ASN ND2 HD22 sing N N 132 ASN OXT HXT sing N N 133 ASP N CA sing N N 134 ASP N H sing N N 135 ASP N H2 sing N N 136 ASP CA C sing N N 137 ASP CA CB sing N N 138 ASP CA HA sing N N 139 ASP C O doub N N 140 ASP C OXT sing N N 141 ASP CB CG sing N N 142 ASP CB HB2 sing N N 143 ASP CB HB3 sing N N 144 ASP CG OD1 doub N N 145 ASP CG OD2 sing N N 146 ASP OD2 HD2 sing N N 147 ASP OXT HXT sing N N 148 CYS N CA sing N N 149 CYS N H sing N N 150 CYS N H2 sing N N 151 CYS CA C sing N N 152 CYS CA CB sing N N 153 CYS CA HA sing N N 154 CYS C O doub N N 155 CYS C OXT sing N N 156 CYS CB SG sing N N 157 CYS CB HB2 sing N N 158 CYS CB HB3 sing N N 159 CYS SG HG sing N N 160 CYS OXT HXT sing N N 161 DA OP3 P sing N N 162 DA OP3 HOP3 sing N N 163 DA P OP1 doub N N 164 DA P OP2 sing N N 165 DA P "O5'" sing N N 166 DA OP2 HOP2 sing N N 167 DA "O5'" "C5'" sing N N 168 DA "C5'" "C4'" sing N N 169 DA "C5'" "H5'" sing N N 170 DA "C5'" "H5''" sing N N 171 DA "C4'" "O4'" sing N N 172 DA "C4'" "C3'" sing N N 173 DA "C4'" "H4'" sing N N 174 DA "O4'" "C1'" sing N N 175 DA "C3'" "O3'" sing N N 176 DA "C3'" "C2'" sing N N 177 DA "C3'" "H3'" sing N N 178 DA "O3'" "HO3'" sing N N 179 DA "C2'" "C1'" sing N N 180 DA "C2'" "H2'" sing N N 181 DA "C2'" "H2''" sing N N 182 DA "C1'" N9 sing N N 183 DA "C1'" "H1'" sing N N 184 DA N9 C8 sing Y N 185 DA N9 C4 sing Y N 186 DA C8 N7 doub Y N 187 DA C8 H8 sing N N 188 DA N7 C5 sing Y N 189 DA C5 C6 sing Y N 190 DA C5 C4 doub Y N 191 DA C6 N6 sing N N 192 DA C6 N1 doub Y N 193 DA N6 H61 sing N N 194 DA N6 H62 sing N N 195 DA N1 C2 sing Y N 196 DA C2 N3 doub Y N 197 DA C2 H2 sing N N 198 DA N3 C4 sing Y N 199 DC OP3 P sing N N 200 DC OP3 HOP3 sing N N 201 DC P OP1 doub N N 202 DC P OP2 sing N N 203 DC P "O5'" sing N N 204 DC OP2 HOP2 sing N N 205 DC "O5'" "C5'" sing N N 206 DC "C5'" "C4'" sing N N 207 DC "C5'" "H5'" sing N N 208 DC "C5'" "H5''" sing N N 209 DC "C4'" "O4'" sing N N 210 DC "C4'" "C3'" sing N N 211 DC "C4'" "H4'" sing N N 212 DC "O4'" "C1'" sing N N 213 DC "C3'" "O3'" sing N N 214 DC "C3'" "C2'" sing N N 215 DC "C3'" "H3'" sing N N 216 DC "O3'" "HO3'" sing N N 217 DC "C2'" "C1'" sing N N 218 DC "C2'" "H2'" sing N N 219 DC "C2'" "H2''" sing N N 220 DC "C1'" N1 sing N N 221 DC "C1'" "H1'" sing N N 222 DC N1 C2 sing N N 223 DC N1 C6 sing N N 224 DC C2 O2 doub N N 225 DC C2 N3 sing N N 226 DC N3 C4 doub N N 227 DC C4 N4 sing N N 228 DC C4 C5 sing N N 229 DC N4 H41 sing N N 230 DC N4 H42 sing N N 231 DC C5 C6 doub N N 232 DC C5 H5 sing N N 233 DC C6 H6 sing N N 234 DG OP3 P sing N N 235 DG OP3 HOP3 sing N N 236 DG P OP1 doub N N 237 DG P OP2 sing N N 238 DG P "O5'" sing N N 239 DG OP2 HOP2 sing N N 240 DG "O5'" "C5'" sing N N 241 DG "C5'" "C4'" sing N N 242 DG "C5'" "H5'" sing N N 243 DG "C5'" "H5''" sing N N 244 DG "C4'" "O4'" sing N N 245 DG "C4'" "C3'" sing N N 246 DG "C4'" "H4'" sing N N 247 DG "O4'" "C1'" sing N N 248 DG "C3'" "O3'" sing N N 249 DG "C3'" "C2'" sing N N 250 DG "C3'" "H3'" sing N N 251 DG "O3'" "HO3'" sing N N 252 DG "C2'" "C1'" sing N N 253 DG "C2'" "H2'" sing N N 254 DG "C2'" "H2''" sing N N 255 DG "C1'" N9 sing N N 256 DG "C1'" "H1'" sing N N 257 DG N9 C8 sing Y N 258 DG N9 C4 sing Y N 259 DG C8 N7 doub Y N 260 DG C8 H8 sing N N 261 DG N7 C5 sing Y N 262 DG C5 C6 sing N N 263 DG C5 C4 doub Y N 264 DG C6 O6 doub N N 265 DG C6 N1 sing N N 266 DG N1 C2 sing N N 267 DG N1 H1 sing N N 268 DG C2 N2 sing N N 269 DG C2 N3 doub N N 270 DG N2 H21 sing N N 271 DG N2 H22 sing N N 272 DG N3 C4 sing N N 273 DT OP3 P sing N N 274 DT OP3 HOP3 sing N N 275 DT P OP1 doub N N 276 DT P OP2 sing N N 277 DT P "O5'" sing N N 278 DT OP2 HOP2 sing N N 279 DT "O5'" "C5'" sing N N 280 DT "C5'" "C4'" sing N N 281 DT "C5'" "H5'" sing N N 282 DT "C5'" "H5''" sing N N 283 DT "C4'" "O4'" sing N N 284 DT "C4'" "C3'" sing N N 285 DT "C4'" "H4'" sing N N 286 DT "O4'" "C1'" sing N N 287 DT "C3'" "O3'" sing N N 288 DT "C3'" "C2'" sing N N 289 DT "C3'" "H3'" sing N N 290 DT "O3'" "HO3'" sing N N 291 DT "C2'" "C1'" sing N N 292 DT "C2'" "H2'" sing N N 293 DT "C2'" "H2''" sing N N 294 DT "C1'" N1 sing N N 295 DT "C1'" "H1'" sing N N 296 DT N1 C2 sing N N 297 DT N1 C6 sing N N 298 DT C2 O2 doub N N 299 DT C2 N3 sing N N 300 DT N3 C4 sing N N 301 DT N3 H3 sing N N 302 DT C4 O4 doub N N 303 DT C4 C5 sing N N 304 DT C5 C7 sing N N 305 DT C5 C6 doub N N 306 DT C7 H71 sing N N 307 DT C7 H72 sing N N 308 DT C7 H73 sing N N 309 DT C6 H6 sing N N 310 GLN N CA sing N N 311 GLN N H sing N N 312 GLN N H2 sing N N 313 GLN CA C sing N N 314 GLN CA CB sing N N 315 GLN CA HA sing N N 316 GLN C O doub N N 317 GLN C OXT sing N N 318 GLN CB CG sing N N 319 GLN CB HB2 sing N N 320 GLN CB HB3 sing N N 321 GLN CG CD sing N N 322 GLN CG HG2 sing N N 323 GLN CG HG3 sing N N 324 GLN CD OE1 doub N N 325 GLN CD NE2 sing N N 326 GLN NE2 HE21 sing N N 327 GLN NE2 HE22 sing N N 328 GLN OXT HXT sing N N 329 GLU N CA sing N N 330 GLU N H sing N N 331 GLU N H2 sing N N 332 GLU CA C sing N N 333 GLU CA CB sing N N 334 GLU CA HA sing N N 335 GLU C O doub N N 336 GLU C OXT sing N N 337 GLU CB CG sing N N 338 GLU CB HB2 sing N N 339 GLU CB HB3 sing N N 340 GLU CG CD sing N N 341 GLU CG HG2 sing N N 342 GLU CG HG3 sing N N 343 GLU CD OE1 doub N N 344 GLU CD OE2 sing N N 345 GLU OE2 HE2 sing N N 346 GLU OXT HXT sing N N 347 GLY N CA sing N N 348 GLY N H sing N N 349 GLY N H2 sing N N 350 GLY CA C sing N N 351 GLY CA HA2 sing N N 352 GLY CA HA3 sing N N 353 GLY C O doub N N 354 GLY C OXT sing N N 355 GLY OXT HXT sing N N 356 HIS N CA sing N N 357 HIS N H sing N N 358 HIS N H2 sing N N 359 HIS CA C sing N N 360 HIS CA CB sing N N 361 HIS CA HA sing N N 362 HIS C O doub N N 363 HIS C OXT sing N N 364 HIS CB CG sing N N 365 HIS CB HB2 sing N N 366 HIS CB HB3 sing N N 367 HIS CG ND1 sing Y N 368 HIS CG CD2 doub Y N 369 HIS ND1 CE1 doub Y N 370 HIS ND1 HD1 sing N N 371 HIS CD2 NE2 sing Y N 372 HIS CD2 HD2 sing N N 373 HIS CE1 NE2 sing Y N 374 HIS CE1 HE1 sing N N 375 HIS NE2 HE2 sing N N 376 HIS OXT HXT sing N N 377 HOH O H1 sing N N 378 HOH O H2 sing N N 379 ILE N CA sing N N 380 ILE N H sing N N 381 ILE N H2 sing N N 382 ILE CA C sing N N 383 ILE CA CB sing N N 384 ILE CA HA sing N N 385 ILE C O doub N N 386 ILE C OXT sing N N 387 ILE CB CG1 sing N N 388 ILE CB CG2 sing N N 389 ILE CB HB sing N N 390 ILE CG1 CD1 sing N N 391 ILE CG1 HG12 sing N N 392 ILE CG1 HG13 sing N N 393 ILE CG2 HG21 sing N N 394 ILE CG2 HG22 sing N N 395 ILE CG2 HG23 sing N N 396 ILE CD1 HD11 sing N N 397 ILE CD1 HD12 sing N N 398 ILE CD1 HD13 sing N N 399 ILE OXT HXT sing N N 400 LEU N CA sing N N 401 LEU N H sing N N 402 LEU N H2 sing N N 403 LEU CA C sing N N 404 LEU CA CB sing N N 405 LEU CA HA sing N N 406 LEU C O doub N N 407 LEU C OXT sing N N 408 LEU CB CG sing N N 409 LEU CB HB2 sing N N 410 LEU CB HB3 sing N N 411 LEU CG CD1 sing N N 412 LEU CG CD2 sing N N 413 LEU CG HG sing N N 414 LEU CD1 HD11 sing N N 415 LEU CD1 HD12 sing N N 416 LEU CD1 HD13 sing N N 417 LEU CD2 HD21 sing N N 418 LEU CD2 HD22 sing N N 419 LEU CD2 HD23 sing N N 420 LEU OXT HXT sing N N 421 LYS N CA sing N N 422 LYS N H sing N N 423 LYS N H2 sing N N 424 LYS CA C sing N N 425 LYS CA CB sing N N 426 LYS CA HA sing N N 427 LYS C O doub N N 428 LYS C OXT sing N N 429 LYS CB CG sing N N 430 LYS CB HB2 sing N N 431 LYS CB HB3 sing N N 432 LYS CG CD sing N N 433 LYS CG HG2 sing N N 434 LYS CG HG3 sing N N 435 LYS CD CE sing N N 436 LYS CD HD2 sing N N 437 LYS CD HD3 sing N N 438 LYS CE NZ sing N N 439 LYS CE HE2 sing N N 440 LYS CE HE3 sing N N 441 LYS NZ HZ1 sing N N 442 LYS NZ HZ2 sing N N 443 LYS NZ HZ3 sing N N 444 LYS OXT HXT sing N N 445 MET N CA sing N N 446 MET N H sing N N 447 MET N H2 sing N N 448 MET CA C sing N N 449 MET CA CB sing N N 450 MET CA HA sing N N 451 MET C O doub N N 452 MET C OXT sing N N 453 MET CB CG sing N N 454 MET CB HB2 sing N N 455 MET CB HB3 sing N N 456 MET CG SD sing N N 457 MET CG HG2 sing N N 458 MET CG HG3 sing N N 459 MET SD CE sing N N 460 MET CE HE1 sing N N 461 MET CE HE2 sing N N 462 MET CE HE3 sing N N 463 MET OXT HXT sing N N 464 PHE N CA sing N N 465 PHE N H sing N N 466 PHE N H2 sing N N 467 PHE CA C sing N N 468 PHE CA CB sing N N 469 PHE CA HA sing N N 470 PHE C O doub N N 471 PHE C OXT sing N N 472 PHE CB CG sing N N 473 PHE CB HB2 sing N N 474 PHE CB HB3 sing N N 475 PHE CG CD1 doub Y N 476 PHE CG CD2 sing Y N 477 PHE CD1 CE1 sing Y N 478 PHE CD1 HD1 sing N N 479 PHE CD2 CE2 doub Y N 480 PHE CD2 HD2 sing N N 481 PHE CE1 CZ doub Y N 482 PHE CE1 HE1 sing N N 483 PHE CE2 CZ sing Y N 484 PHE CE2 HE2 sing N N 485 PHE CZ HZ sing N N 486 PHE OXT HXT sing N N 487 PRO N CA sing N N 488 PRO N CD sing N N 489 PRO N H sing N N 490 PRO CA C sing N N 491 PRO CA CB sing N N 492 PRO CA HA sing N N 493 PRO C O doub N N 494 PRO C OXT sing N N 495 PRO CB CG sing N N 496 PRO CB HB2 sing N N 497 PRO CB HB3 sing N N 498 PRO CG CD sing N N 499 PRO CG HG2 sing N N 500 PRO CG HG3 sing N N 501 PRO CD HD2 sing N N 502 PRO CD HD3 sing N N 503 PRO OXT HXT sing N N 504 SER N CA sing N N 505 SER N H sing N N 506 SER N H2 sing N N 507 SER CA C sing N N 508 SER CA CB sing N N 509 SER CA HA sing N N 510 SER C O doub N N 511 SER C OXT sing N N 512 SER CB OG sing N N 513 SER CB HB2 sing N N 514 SER CB HB3 sing N N 515 SER OG HG sing N N 516 SER OXT HXT sing N N 517 THR N CA sing N N 518 THR N H sing N N 519 THR N H2 sing N N 520 THR CA C sing N N 521 THR CA CB sing N N 522 THR CA HA sing N N 523 THR C O doub N N 524 THR C OXT sing N N 525 THR CB OG1 sing N N 526 THR CB CG2 sing N N 527 THR CB HB sing N N 528 THR OG1 HG1 sing N N 529 THR CG2 HG21 sing N N 530 THR CG2 HG22 sing N N 531 THR CG2 HG23 sing N N 532 THR OXT HXT sing N N 533 TRP N CA sing N N 534 TRP N H sing N N 535 TRP N H2 sing N N 536 TRP CA C sing N N 537 TRP CA CB sing N N 538 TRP CA HA sing N N 539 TRP C O doub N N 540 TRP C OXT sing N N 541 TRP CB CG sing N N 542 TRP CB HB2 sing N N 543 TRP CB HB3 sing N N 544 TRP CG CD1 doub Y N 545 TRP CG CD2 sing Y N 546 TRP CD1 NE1 sing Y N 547 TRP CD1 HD1 sing N N 548 TRP CD2 CE2 doub Y N 549 TRP CD2 CE3 sing Y N 550 TRP NE1 CE2 sing Y N 551 TRP NE1 HE1 sing N N 552 TRP CE2 CZ2 sing Y N 553 TRP CE3 CZ3 doub Y N 554 TRP CE3 HE3 sing N N 555 TRP CZ2 CH2 doub Y N 556 TRP CZ2 HZ2 sing N N 557 TRP CZ3 CH2 sing Y N 558 TRP CZ3 HZ3 sing N N 559 TRP CH2 HH2 sing N N 560 TRP OXT HXT sing N N 561 TYR N CA sing N N 562 TYR N H sing N N 563 TYR N H2 sing N N 564 TYR CA C sing N N 565 TYR CA CB sing N N 566 TYR CA HA sing N N 567 TYR C O doub N N 568 TYR C OXT sing N N 569 TYR CB CG sing N N 570 TYR CB HB2 sing N N 571 TYR CB HB3 sing N N 572 TYR CG CD1 doub Y N 573 TYR CG CD2 sing Y N 574 TYR CD1 CE1 sing Y N 575 TYR CD1 HD1 sing N N 576 TYR CD2 CE2 doub Y N 577 TYR CD2 HD2 sing N N 578 TYR CE1 CZ doub Y N 579 TYR CE1 HE1 sing N N 580 TYR CE2 CZ sing Y N 581 TYR CE2 HE2 sing N N 582 TYR CZ OH sing N N 583 TYR OH HH sing N N 584 TYR OXT HXT sing N N 585 VAL N CA sing N N 586 VAL N H sing N N 587 VAL N H2 sing N N 588 VAL CA C sing N N 589 VAL CA CB sing N N 590 VAL CA HA sing N N 591 VAL C O doub N N 592 VAL C OXT sing N N 593 VAL CB CG1 sing N N 594 VAL CB CG2 sing N N 595 VAL CB HB sing N N 596 VAL CG1 HG11 sing N N 597 VAL CG1 HG12 sing N N 598 VAL CG1 HG13 sing N N 599 VAL CG2 HG21 sing N N 600 VAL CG2 HG22 sing N N 601 VAL CG2 HG23 sing N N 602 VAL OXT HXT sing N N 603 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4XO0 'double helix' 4XO0 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DC 1 1_555 C DG 8 1_555 0.089 -0.155 0.412 -21.788 -4.589 -0.035 1 B_DC1:DG16_G B 1 ? G 16 ? 19 1 1 B DT 2 1_555 C DA 7 1_555 -0.097 -0.102 0.409 -16.612 -8.567 -1.197 2 B_DT2:DA15_G B 2 ? G 15 ? 20 1 1 B DT 3 1_555 C DA 6 1_555 0.077 -0.220 -0.171 -3.087 -9.298 4.950 3 B_DT3:DA14_G B 3 ? G 14 ? 20 1 1 B DA 4 1_555 C DT 5 1_555 0.270 -0.131 0.008 -6.463 -8.540 0.656 4 B_DA4:DT13_G B 4 ? G 13 ? 20 1 1 B DT 5 1_555 C DA 4 1_555 0.627 -0.277 0.006 -3.326 -7.905 0.552 5 B_DT5:DA12_G B 5 ? G 12 ? 20 1 1 B DT 8 1_555 C DA 1 1_555 -1.119 -0.261 0.041 1.581 -7.424 -5.014 6 B_DT8:DA9_G B 8 ? G 9 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DC 1 1_555 C DG 8 1_555 B DT 2 1_555 C DA 7 1_555 0.278 -0.308 3.219 2.239 8.616 35.868 -1.624 -0.143 3.077 13.731 -3.569 36.921 1 BB_DC1DT2:DA15DG16_GG B 1 ? G 16 ? B 2 ? G 15 ? 1 B DT 2 1_555 C DA 7 1_555 B DT 3 1_555 C DA 6 1_555 0.053 -0.410 2.894 3.384 2.718 28.820 -1.337 0.545 2.832 5.423 -6.750 29.138 2 BB_DT2DT3:DA14DA15_GG B 2 ? G 15 ? B 3 ? G 14 ? 1 B DT 3 1_555 C DA 6 1_555 B DA 4 1_555 C DT 5 1_555 -0.728 0.762 3.376 -5.939 3.960 41.775 0.627 0.366 3.498 5.505 8.255 42.354 3 BB_DT3DA4:DT13DA14_GG B 3 ? G 14 ? B 4 ? G 13 ? 1 B DA 4 1_555 C DT 5 1_555 B DT 5 1_555 C DA 4 1_555 0.028 -0.730 3.290 1.012 0.882 33.064 -1.432 0.122 3.269 1.550 -1.778 33.090 4 BB_DA4DT5:DA12DT13_GG B 4 ? G 13 ? B 5 ? G 12 ? # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number R01GM111386 _pdbx_audit_support.ordinal 1 # _atom_sites.entry_id 4XO0 _atom_sites.fract_transf_matrix[1][1] 0.018302 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.006880 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.021332 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O P S # loop_