HEADER TRANSFERASE/TRANSFERASE INHIBITOR 26-JAN-15 4XV9 TITLE B-RAF KINASE DOMAIN IN COMPLEX WITH PLX5568 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE/THREONINE-PROTEIN KINASE B-RAF; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 444-705; COMPND 5 SYNONYM: PROTO-ONCOGENE B-RAF,P94,V-RAF MURINE SARCOMA VIRAL ONCOGENE COMPND 6 HOMOLOG B1; COMPND 7 EC: 2.7.11.1; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BRAF, BRAF1, RAFB1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS B-RAF, BRAF, PROTO-ONCOGENE, V600E, KINASE, TRANSFERASE, TRANSFERASE- KEYWDS 2 TRANSFERASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR Y.ZHANG,C.ZHANG,W.WANG REVDAT 3 28-FEB-24 4XV9 1 JRNL REMARK REVDAT 2 04-NOV-15 4XV9 1 JRNL REVDAT 1 28-OCT-15 4XV9 0 JRNL AUTH C.ZHANG,W.SPEVAK,Y.ZHANG,E.A.BURTON,Y.MA,G.HABETS,J.ZHANG, JRNL AUTH 2 J.LIN,T.EWING,B.MATUSOW,G.TSANG,A.MARIMUTHU,H.CHO,G.WU, JRNL AUTH 3 W.WANG,D.FONG,H.NGUYEN,S.SHI,P.WOMACK,M.NESPI,R.SHELLOOE, JRNL AUTH 4 H.CARIAS,B.POWELL,E.LIGHT,L.SANFTNER,J.WALTERS,J.TSAI, JRNL AUTH 5 B.L.WEST,G.VISOR,H.REZAEI,P.S.LIN,K.NOLOP,P.N.IBRAHIM, JRNL AUTH 6 P.HIRTH,G.BOLLAG JRNL TITL RAF INHIBITORS THAT EVADE PARADOXICAL MAPK PATHWAY JRNL TITL 2 ACTIVATION. JRNL REF NATURE V. 526 583 2015 JRNL REFN ESSN 1476-4687 JRNL PMID 26466569 JRNL DOI 10.1038/NATURE14982 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.25 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 18.63 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 24901 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.238 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 1266 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1804 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2230 REMARK 3 BIN FREE R VALUE SET COUNT : 92 REMARK 3 BIN FREE R VALUE : 0.2450 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2079 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 39 REMARK 3 SOLVENT ATOMS : 251 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.42 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.26000 REMARK 3 B22 (A**2) : 0.26000 REMARK 3 B33 (A**2) : -0.51000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.167 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.151 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.115 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.107 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.940 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.921 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2224 ; 0.006 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 2000 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3016 ; 1.144 ; 1.973 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4666 ; 0.758 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 273 ; 5.008 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 323 ; 0.059 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2476 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 456 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 472 ; 0.172 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2361 ; 0.205 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 1245 ; 0.080 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 173 ; 0.119 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 16 ; 0.113 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 54 ; 0.227 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 28 ; 0.078 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1339 ; 0.199 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2169 ; 0.379 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 885 ; 0.625 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 847 ; 1.026 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1136 A 1151 REMARK 3 ORIGIN FOR THE GROUP (A): 80.4150 21.0410 4.4460 REMARK 3 T TENSOR REMARK 3 T11: 0.1461 T22: 0.1468 REMARK 3 T33: 0.1479 T12: -0.0001 REMARK 3 T13: 0.0019 T23: -0.0155 REMARK 3 L TENSOR REMARK 3 L11: 0.8515 L22: 2.3533 REMARK 3 L33: 2.2046 L12: 0.7170 REMARK 3 L13: 0.1118 L23: -1.0284 REMARK 3 S TENSOR REMARK 3 S11: -0.0368 S12: -0.0313 S13: -0.0705 REMARK 3 S21: -0.0230 S22: 0.0137 S23: 0.0503 REMARK 3 S31: -0.0600 S32: 0.0127 S33: 0.0230 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 12 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 448 A 466 REMARK 3 RESIDUE RANGE : A 467 A 484 REMARK 3 RESIDUE RANGE : A 485 A 534 REMARK 3 RESIDUE RANGE : A 535 A 582 REMARK 3 RESIDUE RANGE : A 583 A 587 REMARK 3 RESIDUE RANGE : A 588 A 597 REMARK 3 RESIDUE RANGE : A 613 A 667 REMARK 3 RESIDUE RANGE : A 668 A 705 REMARK 3 RESIDUE RANGE : A 706 A 721 REMARK 3 RESIDUE RANGE : A 801 A 801 REMARK 3 RESIDUE RANGE : A 802 A 802 REMARK 3 RESIDUE RANGE : A 901 A 1070 REMARK 3 ORIGIN FOR THE GROUP (A): 77.6100 20.2480 0.7820 REMARK 3 T TENSOR REMARK 3 T11: 0.0448 T22: 0.0011 REMARK 3 T33: 0.0984 T12: -0.0009 REMARK 3 T13: 0.0390 T23: -0.0090 REMARK 3 L TENSOR REMARK 3 L11: 0.9855 L22: 1.4470 REMARK 3 L33: 2.5082 L12: 0.3691 REMARK 3 L13: -0.2157 L23: -1.0573 REMARK 3 S TENSOR REMARK 3 S11: -0.0183 S12: 0.1147 S13: -0.1627 REMARK 3 S21: -0.0513 S22: 0.0928 S23: 0.1569 REMARK 3 S31: 0.2080 S32: -0.1813 S33: -0.0745 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1071 A 1135 REMARK 3 ORIGIN FOR THE GROUP (A): 79.3600 22.5070 3.1830 REMARK 3 T TENSOR REMARK 3 T11: 0.1394 T22: 0.1403 REMARK 3 T33: 0.2433 T12: -0.0118 REMARK 3 T13: 0.0286 T23: -0.0043 REMARK 3 L TENSOR REMARK 3 L11: 1.1644 L22: 0.6992 REMARK 3 L33: 2.5131 L12: 0.2779 REMARK 3 L13: 0.1909 L23: -0.1740 REMARK 3 S TENSOR REMARK 3 S11: -0.0113 S12: 0.1447 S13: -0.0565 REMARK 3 S21: -0.0267 S22: -0.0121 S23: 0.1006 REMARK 3 S31: 0.1915 S32: -0.1412 S33: 0.0233 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4XV9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-JAN-15. REMARK 100 THE DEPOSITION ID IS D_1000206350. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-NOV-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : SIDE-SCATTERING CUBEROOT I-BEAM REMARK 200 BENT SINGLE CRYSTAL,ASYMETRIC REMARK 200 CUT 12.2 DEGS. REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26185 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 119.523 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 13.60 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.16 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.81 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M MES AT PH6.0, 35% (V/V) 2-METHYL- REMARK 280 2,4-PENTANEDIOL 0.2M LI2SO4, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+3/4 REMARK 290 4555 Y,-X,Z+1/4 REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z+1/2 REMARK 290 7555 Y,X,-Z+1/4 REMARK 290 8555 -Y,-X,-Z+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 26.25350 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 39.38025 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 13.12675 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 26.25350 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 13.12675 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 39.38025 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 119.29700 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 119.29700 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -13.12675 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 432 REMARK 465 LYS A 433 REMARK 465 LYS A 434 REMARK 465 GLY A 435 REMARK 465 HIS A 436 REMARK 465 HIS A 437 REMARK 465 HIS A 438 REMARK 465 HIS A 439 REMARK 465 HIS A 440 REMARK 465 HIS A 441 REMARK 465 GLY A 442 REMARK 465 SER A 443 REMARK 465 ARG A 444 REMARK 465 ASP A 445 REMARK 465 SER A 446 REMARK 465 SER A 447 REMARK 465 THR A 599 REMARK 465 VAL A 600 REMARK 465 LYS A 601 REMARK 465 SER A 602 REMARK 465 ARG A 603 REMARK 465 TRP A 604 REMARK 465 SER A 605 REMARK 465 GLY A 606 REMARK 465 SER A 607 REMARK 465 HIS A 608 REMARK 465 GLN A 609 REMARK 465 PHE A 610 REMARK 465 GLU A 611 REMARK 465 GLN A 612 REMARK 465 GLY A 723 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 522 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 575 -11.80 81.85 REMARK 500 ASP A 576 41.76 -148.18 REMARK 500 ASP A 587 18.05 56.55 REMARK 500 ASP A 587 19.05 56.55 REMARK 500 ASN A 588 -46.14 -133.39 REMARK 500 ASN A 588 -48.82 -133.40 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1149 DISTANCE = 5.89 ANGSTROMS REMARK 525 HOH A1150 DISTANCE = 6.19 ANGSTROMS REMARK 525 HOH A1151 DISTANCE = 6.34 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 1OO A 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 802 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4K04 RELATED DB: PDB REMARK 900 RELATED ID: 4K16 RELATED DB: PDB REMARK 900 RELATED ID: 4K1A RELATED DB: PDB DBREF 4XV9 A 442 705 UNP P15056 BRAF_HUMAN 442 705 SEQADV 4XV9 MET A 432 UNP P15056 EXPRESSION TAG SEQADV 4XV9 LYS A 433 UNP P15056 EXPRESSION TAG SEQADV 4XV9 LYS A 434 UNP P15056 EXPRESSION TAG SEQADV 4XV9 GLY A 435 UNP P15056 EXPRESSION TAG SEQADV 4XV9 HIS A 436 UNP P15056 EXPRESSION TAG SEQADV 4XV9 HIS A 437 UNP P15056 EXPRESSION TAG SEQADV 4XV9 HIS A 438 UNP P15056 EXPRESSION TAG SEQADV 4XV9 HIS A 439 UNP P15056 EXPRESSION TAG SEQADV 4XV9 HIS A 440 UNP P15056 EXPRESSION TAG SEQADV 4XV9 HIS A 441 UNP P15056 EXPRESSION TAG SEQADV 4XV9 SER A 443 UNP P15056 ARG 443 ENGINEERED MUTATION SEQADV 4XV9 ALA A 543 UNP P15056 ILE 543 ENGINEERED MUTATION SEQADV 4XV9 SER A 544 UNP P15056 ILE 544 ENGINEERED MUTATION SEQADV 4XV9 LYS A 551 UNP P15056 ILE 551 ENGINEERED MUTATION SEQADV 4XV9 ARG A 562 UNP P15056 GLN 562 ENGINEERED MUTATION SEQADV 4XV9 ASN A 588 UNP P15056 LEU 588 ENGINEERED MUTATION SEQADV 4XV9 SER A 630 UNP P15056 LYS 630 ENGINEERED MUTATION SEQADV 4XV9 GLU A 667 UNP P15056 PHE 667 ENGINEERED MUTATION SEQADV 4XV9 SER A 673 UNP P15056 TYR 673 ENGINEERED MUTATION SEQADV 4XV9 ARG A 688 UNP P15056 ALA 688 ENGINEERED MUTATION SEQADV 4XV9 SER A 706 UNP P15056 EXPRESSION TAG SEQADV 4XV9 PHE A 707 UNP P15056 EXPRESSION TAG SEQADV 4XV9 PRO A 708 UNP P15056 EXPRESSION TAG SEQADV 4XV9 ARG A 709 UNP P15056 EXPRESSION TAG SEQADV 4XV9 ILE A 710 UNP P15056 EXPRESSION TAG SEQADV 4XV9 LEU A 711 UNP P15056 EXPRESSION TAG SEQADV 4XV9 ALA A 712 UNP P15056 EXPRESSION TAG SEQADV 4XV9 GLU A 713 UNP P15056 EXPRESSION TAG SEQADV 4XV9 ILE A 714 UNP P15056 EXPRESSION TAG SEQADV 4XV9 GLU A 715 UNP P15056 EXPRESSION TAG SEQADV 4XV9 GLU A 716 UNP P15056 EXPRESSION TAG SEQADV 4XV9 LEU A 717 UNP P15056 EXPRESSION TAG SEQADV 4XV9 ALA A 718 UNP P15056 EXPRESSION TAG SEQADV 4XV9 ARG A 719 UNP P15056 EXPRESSION TAG SEQADV 4XV9 GLU A 720 UNP P15056 EXPRESSION TAG SEQADV 4XV9 LEU A 721 UNP P15056 EXPRESSION TAG SEQADV 4XV9 SER A 722 UNP P15056 EXPRESSION TAG SEQADV 4XV9 GLY A 723 UNP P15056 EXPRESSION TAG SEQRES 1 A 292 MET LYS LYS GLY HIS HIS HIS HIS HIS HIS GLY SER ARG SEQRES 2 A 292 ASP SER SER ASP ASP TRP GLU ILE PRO ASP GLY GLN ILE SEQRES 3 A 292 THR VAL GLY GLN ARG ILE GLY SER GLY SER PHE GLY THR SEQRES 4 A 292 VAL TYR LYS GLY LYS TRP HIS GLY ASP VAL ALA VAL LYS SEQRES 5 A 292 MET LEU ASN VAL THR ALA PRO THR PRO GLN GLN LEU GLN SEQRES 6 A 292 ALA PHE LYS ASN GLU VAL GLY VAL LEU ARG LYS THR ARG SEQRES 7 A 292 HIS VAL ASN ILE LEU LEU PHE MET GLY TYR SER THR LYS SEQRES 8 A 292 PRO GLN LEU ALA ILE VAL THR GLN TRP CYS GLU GLY SER SEQRES 9 A 292 SER LEU TYR HIS HIS LEU HIS ALA SER GLU THR LYS PHE SEQRES 10 A 292 GLU MET LYS LYS LEU ILE ASP ILE ALA ARG GLN THR ALA SEQRES 11 A 292 ARG GLY MET ASP TYR LEU HIS ALA LYS SER ILE ILE HIS SEQRES 12 A 292 ARG ASP LEU LYS SER ASN ASN ILE PHE LEU HIS GLU ASP SEQRES 13 A 292 ASN THR VAL LYS ILE GLY ASP PHE GLY LEU ALA THR VAL SEQRES 14 A 292 LYS SER ARG TRP SER GLY SER HIS GLN PHE GLU GLN LEU SEQRES 15 A 292 SER GLY SER ILE LEU TRP MET ALA PRO GLU VAL ILE ARG SEQRES 16 A 292 MET GLN ASP SER ASN PRO TYR SER PHE GLN SER ASP VAL SEQRES 17 A 292 TYR ALA PHE GLY ILE VAL LEU TYR GLU LEU MET THR GLY SEQRES 18 A 292 GLN LEU PRO TYR SER ASN ILE ASN ASN ARG ASP GLN ILE SEQRES 19 A 292 ILE GLU MET VAL GLY ARG GLY SER LEU SER PRO ASP LEU SEQRES 20 A 292 SER LYS VAL ARG SER ASN CYS PRO LYS ARG MET LYS ARG SEQRES 21 A 292 LEU MET ALA GLU CYS LEU LYS LYS LYS ARG ASP GLU ARG SEQRES 22 A 292 PRO SER PHE PRO ARG ILE LEU ALA GLU ILE GLU GLU LEU SEQRES 23 A 292 ALA ARG GLU LEU SER GLY HET 1OO A 801 34 HET SO4 A 802 5 HETNAM 1OO N-{3-[(5-CHLORO-1H-PYRROLO[2,3-B]PYRIDIN-3-YL) HETNAM 2 1OO CARBONYL]-2,4-DIFLUOROPHENYL}-4-(TRIFLUOROMETHYL) HETNAM 3 1OO BENZENESULFONAMIDE HETNAM SO4 SULFATE ION FORMUL 2 1OO C21 H11 CL F5 N3 O3 S FORMUL 3 SO4 O4 S 2- FORMUL 4 HOH *251(H2 O) HELIX 1 AA1 THR A 491 ARG A 506 1 16 HELIX 2 AA2 SER A 536 ALA A 543 1 8 HELIX 3 AA3 GLU A 549 LYS A 570 1 22 HELIX 4 AA4 LYS A 578 ASN A 580 5 3 HELIX 5 AA5 GLU A 586 ASN A 588 5 3 HELIX 6 AA6 LEU A 613 MET A 620 5 8 HELIX 7 AA7 ALA A 621 MET A 627 1 7 HELIX 8 AA8 SER A 634 GLY A 652 1 19 HELIX 9 AA9 ASN A 661 ARG A 671 1 11 HELIX 10 AB1 ASP A 677 VAL A 681 5 5 HELIX 11 AB2 PRO A 686 LEU A 697 1 12 HELIX 12 AB3 LYS A 700 ARG A 704 5 5 HELIX 13 AB4 SER A 706 SER A 722 1 17 SHEET 1 AA1 5 THR A 458 GLY A 466 0 SHEET 2 AA1 5 GLY A 469 LYS A 475 -1 O LYS A 473 N GLY A 460 SHEET 3 AA1 5 ASP A 479 LEU A 485 -1 O VAL A 480 N GLY A 474 SHEET 4 AA1 5 ALA A 526 GLN A 530 -1 O ILE A 527 N LYS A 483 SHEET 5 AA1 5 PHE A 516 SER A 520 -1 N GLY A 518 O VAL A 528 SHEET 1 AA2 2 ILE A 582 HIS A 585 0 SHEET 2 AA2 2 THR A 589 ILE A 592 -1 O THR A 589 N HIS A 585 CISPEP 1 LYS A 522 PRO A 523 0 4.95 SITE 1 AC1 20 ILE A 463 VAL A 471 ALA A 481 LYS A 483 SITE 2 AC1 20 LEU A 505 ILE A 513 LEU A 514 THR A 529 SITE 3 AC1 20 GLN A 530 TRP A 531 CYS A 532 LEU A 567 SITE 4 AC1 20 HIS A 574 PHE A 583 ILE A 592 ASP A 594 SITE 5 AC1 20 PHE A 595 HOH A 915 HOH A 919 HOH A1008 SITE 1 AC2 4 PRO A 686 LYS A 687 ARG A 688 HOH A 995 CRYST1 119.297 119.297 52.507 90.00 90.00 90.00 P 43 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008382 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008382 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019045 0.00000