data_4YL0 # _entry.id 4YL0 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.329 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4YL0 WWPDB D_1000207618 # loop_ _pdbx_database_related.content_type _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.details unspecified 4YK5 PDB . unspecified 4YL1 PDB . unspecified 4YL3 PDB . # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 4YL0 _pdbx_database_status.recvd_initial_deposition_date 2015-03-04 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Luz, J.G.' 1 'Antonysamy, S.' 2 'Kuklish, S.L.' 3 'Fisher, M.J.' 4 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Med.Chem. _citation.journal_id_ASTM JMCMAR _citation.journal_id_CSD 0151 _citation.journal_id_ISSN 0022-2623 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 58 _citation.language ? _citation.page_first 4727 _citation.page_last 4737 _citation.title ;Crystal Structures of mPGES-1 Inhibitor Complexes Form a Basis for the Rational Design of Potent Analgesic and Anti-Inflammatory Therapeutics. ; _citation.year 2015 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/acs.jmedchem.5b00330 _citation.pdbx_database_id_PubMed 25961169 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Luz, J.G.' 1 ? primary 'Antonysamy, S.' 2 ? primary 'Kuklish, S.L.' 3 ? primary 'Condon, B.' 4 ? primary 'Lee, M.R.' 5 ? primary 'Allison, D.' 6 ? primary 'Yu, X.P.' 7 ? primary 'Chandrasekhar, S.' 8 ? primary 'Backer, R.' 9 ? primary 'Zhang, A.' 10 ? primary 'Russell, M.' 11 ? primary 'Chang, S.S.' 12 ? primary 'Harvey, A.' 13 ? primary 'Sloan, A.V.' 14 ? primary 'Fisher, M.J.' 15 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 4YL0 _cell.details ? _cell.formula_units_Z ? _cell.length_a 76.621 _cell.length_a_esd ? _cell.length_b 76.621 _cell.length_b_esd ? _cell.length_c 123.092 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 9 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 4YL0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Prostaglandin E synthase' 16701.785 1 5.3.99.3 ? 'residues 5-152' ? 2 non-polymer syn '2-(9-chloro-1H-phenanthro[9,10-d]imidazol-2-yl)benzene-1,3-dicarbonitrile' 378.813 1 ? ? ? ? 3 non-polymer syn GLUTATHIONE 307.323 1 ? ? ? ? 4 non-polymer man 'octyl beta-D-glucopyranoside' 292.369 2 ? ? ? ? 5 non-polymer syn 'TETRAETHYLENE GLYCOL' 194.226 1 ? ? ? ? 6 non-polymer syn 'DI(HYDROXYETHYL)ETHER' 106.120 1 ? ? ? ? 7 water nat water 18.015 126 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Microsomal glutathione S-transferase 1-like 1,MGST1-L1,Microsomal prostaglandin E synthase 1,MPGES-1,p53-induced gene 12 protein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;SLVMSSPALPAFLLCSTLLVIKMYVVAIITGQVRLRKKAFANPEDALRHGGPQY(CSO)RSDPDVERCLRAHRNDMETIY PFLFLGFVYSFLGPNPFVAWMHFLVFLVGRVAHTVAYLGKLRAPIRSVTYTLAQLPCASMALQILWEAARHL ; _entity_poly.pdbx_seq_one_letter_code_can ;SLVMSSPALPAFLLCSTLLVIKMYVVAIITGQVRLRKKAFANPEDALRHGGPQYCRSDPDVERCLRAHRNDMETIYPFLF LGFVYSFLGPNPFVAWMHFLVFLVGRVAHTVAYLGKLRAPIRSVTYTLAQLPCASMALQILWEAARHL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 LEU n 1 3 VAL n 1 4 MET n 1 5 SER n 1 6 SER n 1 7 PRO n 1 8 ALA n 1 9 LEU n 1 10 PRO n 1 11 ALA n 1 12 PHE n 1 13 LEU n 1 14 LEU n 1 15 CYS n 1 16 SER n 1 17 THR n 1 18 LEU n 1 19 LEU n 1 20 VAL n 1 21 ILE n 1 22 LYS n 1 23 MET n 1 24 TYR n 1 25 VAL n 1 26 VAL n 1 27 ALA n 1 28 ILE n 1 29 ILE n 1 30 THR n 1 31 GLY n 1 32 GLN n 1 33 VAL n 1 34 ARG n 1 35 LEU n 1 36 ARG n 1 37 LYS n 1 38 LYS n 1 39 ALA n 1 40 PHE n 1 41 ALA n 1 42 ASN n 1 43 PRO n 1 44 GLU n 1 45 ASP n 1 46 ALA n 1 47 LEU n 1 48 ARG n 1 49 HIS n 1 50 GLY n 1 51 GLY n 1 52 PRO n 1 53 GLN n 1 54 TYR n 1 55 CSO n 1 56 ARG n 1 57 SER n 1 58 ASP n 1 59 PRO n 1 60 ASP n 1 61 VAL n 1 62 GLU n 1 63 ARG n 1 64 CYS n 1 65 LEU n 1 66 ARG n 1 67 ALA n 1 68 HIS n 1 69 ARG n 1 70 ASN n 1 71 ASP n 1 72 MET n 1 73 GLU n 1 74 THR n 1 75 ILE n 1 76 TYR n 1 77 PRO n 1 78 PHE n 1 79 LEU n 1 80 PHE n 1 81 LEU n 1 82 GLY n 1 83 PHE n 1 84 VAL n 1 85 TYR n 1 86 SER n 1 87 PHE n 1 88 LEU n 1 89 GLY n 1 90 PRO n 1 91 ASN n 1 92 PRO n 1 93 PHE n 1 94 VAL n 1 95 ALA n 1 96 TRP n 1 97 MET n 1 98 HIS n 1 99 PHE n 1 100 LEU n 1 101 VAL n 1 102 PHE n 1 103 LEU n 1 104 VAL n 1 105 GLY n 1 106 ARG n 1 107 VAL n 1 108 ALA n 1 109 HIS n 1 110 THR n 1 111 VAL n 1 112 ALA n 1 113 TYR n 1 114 LEU n 1 115 GLY n 1 116 LYS n 1 117 LEU n 1 118 ARG n 1 119 ALA n 1 120 PRO n 1 121 ILE n 1 122 ARG n 1 123 SER n 1 124 VAL n 1 125 THR n 1 126 TYR n 1 127 THR n 1 128 LEU n 1 129 ALA n 1 130 GLN n 1 131 LEU n 1 132 PRO n 1 133 CYS n 1 134 ALA n 1 135 SER n 1 136 MET n 1 137 ALA n 1 138 LEU n 1 139 GLN n 1 140 ILE n 1 141 LEU n 1 142 TRP n 1 143 GLU n 1 144 ALA n 1 145 ALA n 1 146 ARG n 1 147 HIS n 1 148 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 148 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'PTGES, MGST1L1, MPGES1, PGES, PIG12' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name 'FALL ARMYWORM' _entity_src_gen.pdbx_host_org_scientific_name 'Spodoptera frugiperda' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 7108 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PTGES_HUMAN _struct_ref.pdbx_db_accession O14684 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SLVMSSPALPAFLLCSTLLVIKMYVVAIITGQVRLRKKAFANPEDALRHGGPQYCRSDPDVERCLRAHRNDMETIYPFLF LGFVYSFLGPNPFVAWMHFLVFLVGRVAHTVAYLGKLRAPIRSVTYTLAQLPCASMALQILWEAARHL ; _struct_ref.pdbx_align_begin 5 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4YL0 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 148 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O14684 _struct_ref_seq.db_align_beg 5 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 152 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 5 _struct_ref_seq.pdbx_auth_seq_align_end 152 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 4DZ non-polymer . '2-(9-chloro-1H-phenanthro[9,10-d]imidazol-2-yl)benzene-1,3-dicarbonitrile' ? 'C23 H11 Cl N4' 378.813 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BOG D-saccharide n 'octyl beta-D-glucopyranoside' ? 'C14 H28 O6' 292.369 CSO 'L-peptide linking' n S-HYDROXYCYSTEINE ? 'C3 H7 N O3 S' 137.158 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GSH non-polymer . GLUTATHIONE ? 'C10 H17 N3 O6 S' 307.323 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PEG non-polymer . 'DI(HYDROXYETHYL)ETHER' ? 'C4 H10 O3' 106.120 PG4 non-polymer . 'TETRAETHYLENE GLYCOL' ? 'C8 H18 O5' 194.226 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 4YL0 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 4.16 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 70.46 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 294.15 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '100mM Tris HCl pH 9, 35% PEG 1K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 110 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RAYONIX MX225HE' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2009-02-26 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength .91986 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 31-ID' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list .91986 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 31-ID _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 4YL0 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.52 _reflns.d_resolution_low 41.0 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 40178 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 5.3 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 7.1 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _refine.aniso_B[1][1] 0.1700 _refine.aniso_B[1][2] 0.0800 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][2] 0.1700 _refine.aniso_B[2][3] -0.0000 _refine.aniso_B[3][3] -0.5400 _refine.B_iso_max 112.320 _refine.B_iso_mean 28.8700 _refine.B_iso_min 10.450 _refine.correlation_coeff_Fo_to_Fc 0.9550 _refine.correlation_coeff_Fo_to_Fc_free 0.9500 _refine.details 'U VALUES : REFINED INDIVIDUALLY' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 4YL0 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.5200 _refine.ls_d_res_low 30.0000 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 39032 _refine.ls_number_reflns_R_free 2045 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.9700 _refine.ls_percent_reflns_R_free 5.0000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1975 _refine.ls_R_factor_R_free 0.2198 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1963 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details MASK _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.0730 _refine.pdbx_overall_ESU_R_Free 0.0660 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 2.6790 _refine.overall_SU_ML 0.0430 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 1.5200 _refine_hist.d_res_low 30.0000 _refine_hist.pdbx_number_atoms_ligand 108 _refine_hist.number_atoms_solvent 126 _refine_hist.number_atoms_total 1403 _refine_hist.pdbx_number_residues_total 148 _refine_hist.pdbx_B_iso_mean_ligand 54.43 _refine_hist.pdbx_B_iso_mean_solvent 48.65 _refine_hist.pdbx_number_atoms_protein 1169 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.006 0.019 1387 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 1.001 2.044 1893 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 3.634 5.000 165 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 40.031 21.154 52 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 11.549 15.000 207 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 10.905 15.000 11 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.060 0.200 212 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.005 0.021 1019 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 3.341 37.000 615 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 3.466 58.037 774 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 6.405 50.228 771 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 1.232 3.000 1386 ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? 30.596 5.000 34 ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? 16.052 5.000 1433 ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.5200 _refine_ls_shell.d_res_low 1.5590 _refine_ls_shell.number_reflns_all 2817 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 145 _refine_ls_shell.number_reflns_R_work 2672 _refine_ls_shell.percent_reflns_obs 91.5200 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.6050 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.6160 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 4YL0 _struct.title 'Crystal Structures of mPGES-1 Inhibitor Complexes' _struct.pdbx_descriptor 'Prostaglandin E synthase' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 4YL0 _struct_keywords.text 'Inflammation, Prostaglandin, ISOMERASE-ISOMERASE INHIBITOR complex' _struct_keywords.pdbx_keywords 'ISOMERASE/ISOMERASE INHIBITOR' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? G N N 6 ? H N N 7 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 1 ? SER A 5 ? SER A 5 SER A 9 5 ? 5 HELX_P HELX_P2 AA2 ALA A 8 ? LYS A 38 ? ALA A 12 LYS A 42 1 ? 31 HELX_P HELX_P3 AA3 ASN A 42 ? HIS A 49 ? ASN A 46 HIS A 53 1 ? 8 HELX_P HELX_P4 AA4 GLY A 51 ? CSO A 55 ? GLY A 55 CSO A 59 5 ? 5 HELX_P HELX_P5 AA5 ASP A 58 ? PHE A 87 ? ASP A 62 PHE A 91 1 ? 30 HELX_P HELX_P6 AA6 ASN A 91 ? GLY A 115 ? ASN A 95 GLY A 119 1 ? 25 HELX_P HELX_P7 AA7 PRO A 120 ? HIS A 147 ? PRO A 124 HIS A 151 1 ? 28 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A TYR 54 C ? ? ? 1_555 A CSO 55 N ? ? A TYR 58 A CSO 59 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale2 covale both ? A CSO 55 C ? ? ? 1_555 A ARG 56 N ? ? A CSO 59 A ARG 60 1_555 ? ? ? ? ? ? ? 1.331 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ALA _struct_mon_prot_cis.label_seq_id 119 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ALA _struct_mon_prot_cis.auth_seq_id 123 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 120 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 124 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 2.30 # _atom_sites.entry_id 4YL0 _atom_sites.fract_transf_matrix[1][1] 0.013051 _atom_sites.fract_transf_matrix[1][2] 0.007535 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015070 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008124 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CL N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 5 5 SER SER A . n A 1 2 LEU 2 6 6 LEU LEU A . n A 1 3 VAL 3 7 7 VAL VAL A . n A 1 4 MET 4 8 8 MET MET A . n A 1 5 SER 5 9 9 SER SER A . n A 1 6 SER 6 10 10 SER SER A . n A 1 7 PRO 7 11 11 PRO PRO A . n A 1 8 ALA 8 12 12 ALA ALA A . n A 1 9 LEU 9 13 13 LEU LEU A . n A 1 10 PRO 10 14 14 PRO PRO A . n A 1 11 ALA 11 15 15 ALA ALA A . n A 1 12 PHE 12 16 16 PHE PHE A . n A 1 13 LEU 13 17 17 LEU LEU A . n A 1 14 LEU 14 18 18 LEU LEU A . n A 1 15 CYS 15 19 19 CYS CYS A . n A 1 16 SER 16 20 20 SER SER A . n A 1 17 THR 17 21 21 THR THR A . n A 1 18 LEU 18 22 22 LEU LEU A . n A 1 19 LEU 19 23 23 LEU LEU A . n A 1 20 VAL 20 24 24 VAL VAL A . n A 1 21 ILE 21 25 25 ILE ILE A . n A 1 22 LYS 22 26 26 LYS LYS A . n A 1 23 MET 23 27 27 MET MET A . n A 1 24 TYR 24 28 28 TYR TYR A . n A 1 25 VAL 25 29 29 VAL VAL A . n A 1 26 VAL 26 30 30 VAL VAL A . n A 1 27 ALA 27 31 31 ALA ALA A . n A 1 28 ILE 28 32 32 ILE ILE A . n A 1 29 ILE 29 33 33 ILE ILE A . n A 1 30 THR 30 34 34 THR THR A . n A 1 31 GLY 31 35 35 GLY GLY A . n A 1 32 GLN 32 36 36 GLN GLN A . n A 1 33 VAL 33 37 37 VAL VAL A . n A 1 34 ARG 34 38 38 ARG ARG A . n A 1 35 LEU 35 39 39 LEU LEU A . n A 1 36 ARG 36 40 40 ARG ARG A . n A 1 37 LYS 37 41 41 LYS LYS A . n A 1 38 LYS 38 42 42 LYS LYS A . n A 1 39 ALA 39 43 43 ALA ALA A . n A 1 40 PHE 40 44 44 PHE PHE A . n A 1 41 ALA 41 45 45 ALA ALA A . n A 1 42 ASN 42 46 46 ASN ASN A . n A 1 43 PRO 43 47 47 PRO PRO A . n A 1 44 GLU 44 48 48 GLU GLU A . n A 1 45 ASP 45 49 49 ASP ASP A . n A 1 46 ALA 46 50 50 ALA ALA A . n A 1 47 LEU 47 51 51 LEU LEU A . n A 1 48 ARG 48 52 52 ARG ARG A . n A 1 49 HIS 49 53 53 HIS HIS A . n A 1 50 GLY 50 54 54 GLY GLY A . n A 1 51 GLY 51 55 55 GLY GLY A . n A 1 52 PRO 52 56 56 PRO PRO A . n A 1 53 GLN 53 57 57 GLN GLN A . n A 1 54 TYR 54 58 58 TYR TYR A . n A 1 55 CSO 55 59 59 CSO CSO A . n A 1 56 ARG 56 60 60 ARG ARG A . n A 1 57 SER 57 61 61 SER SER A . n A 1 58 ASP 58 62 62 ASP ASP A . n A 1 59 PRO 59 63 63 PRO PRO A . n A 1 60 ASP 60 64 64 ASP ASP A . n A 1 61 VAL 61 65 65 VAL VAL A . n A 1 62 GLU 62 66 66 GLU GLU A . n A 1 63 ARG 63 67 67 ARG ARG A . n A 1 64 CYS 64 68 68 CYS CYS A . n A 1 65 LEU 65 69 69 LEU LEU A . n A 1 66 ARG 66 70 70 ARG ARG A . n A 1 67 ALA 67 71 71 ALA ALA A . n A 1 68 HIS 68 72 72 HIS HIS A . n A 1 69 ARG 69 73 73 ARG ARG A . n A 1 70 ASN 70 74 74 ASN ASN A . n A 1 71 ASP 71 75 75 ASP ASP A . n A 1 72 MET 72 76 76 MET MET A . n A 1 73 GLU 73 77 77 GLU GLU A . n A 1 74 THR 74 78 78 THR THR A . n A 1 75 ILE 75 79 79 ILE ILE A . n A 1 76 TYR 76 80 80 TYR TYR A . n A 1 77 PRO 77 81 81 PRO PRO A . n A 1 78 PHE 78 82 82 PHE PHE A . n A 1 79 LEU 79 83 83 LEU LEU A . n A 1 80 PHE 80 84 84 PHE PHE A . n A 1 81 LEU 81 85 85 LEU LEU A . n A 1 82 GLY 82 86 86 GLY GLY A . n A 1 83 PHE 83 87 87 PHE PHE A . n A 1 84 VAL 84 88 88 VAL VAL A . n A 1 85 TYR 85 89 89 TYR TYR A . n A 1 86 SER 86 90 90 SER SER A . n A 1 87 PHE 87 91 91 PHE PHE A . n A 1 88 LEU 88 92 92 LEU LEU A . n A 1 89 GLY 89 93 93 GLY GLY A . n A 1 90 PRO 90 94 94 PRO PRO A . n A 1 91 ASN 91 95 95 ASN ASN A . n A 1 92 PRO 92 96 96 PRO PRO A . n A 1 93 PHE 93 97 97 PHE PHE A . n A 1 94 VAL 94 98 98 VAL VAL A . n A 1 95 ALA 95 99 99 ALA ALA A . n A 1 96 TRP 96 100 100 TRP TRP A . n A 1 97 MET 97 101 101 MET MET A . n A 1 98 HIS 98 102 102 HIS HIS A . n A 1 99 PHE 99 103 103 PHE PHE A . n A 1 100 LEU 100 104 104 LEU LEU A . n A 1 101 VAL 101 105 105 VAL VAL A . n A 1 102 PHE 102 106 106 PHE PHE A . n A 1 103 LEU 103 107 107 LEU LEU A . n A 1 104 VAL 104 108 108 VAL VAL A . n A 1 105 GLY 105 109 109 GLY GLY A . n A 1 106 ARG 106 110 110 ARG ARG A . n A 1 107 VAL 107 111 111 VAL VAL A . n A 1 108 ALA 108 112 112 ALA ALA A . n A 1 109 HIS 109 113 113 HIS HIS A . n A 1 110 THR 110 114 114 THR THR A . n A 1 111 VAL 111 115 115 VAL VAL A . n A 1 112 ALA 112 116 116 ALA ALA A . n A 1 113 TYR 113 117 117 TYR TYR A . n A 1 114 LEU 114 118 118 LEU LEU A . n A 1 115 GLY 115 119 119 GLY GLY A . n A 1 116 LYS 116 120 120 LYS LYS A . n A 1 117 LEU 117 121 121 LEU LEU A . n A 1 118 ARG 118 122 122 ARG ARG A . n A 1 119 ALA 119 123 123 ALA ALA A . n A 1 120 PRO 120 124 124 PRO PRO A . n A 1 121 ILE 121 125 125 ILE ILE A . n A 1 122 ARG 122 126 126 ARG ARG A . n A 1 123 SER 123 127 127 SER SER A . n A 1 124 VAL 124 128 128 VAL VAL A . n A 1 125 THR 125 129 129 THR THR A . n A 1 126 TYR 126 130 130 TYR TYR A . n A 1 127 THR 127 131 131 THR THR A . n A 1 128 LEU 128 132 132 LEU LEU A . n A 1 129 ALA 129 133 133 ALA ALA A . n A 1 130 GLN 130 134 134 GLN GLN A . n A 1 131 LEU 131 135 135 LEU LEU A . n A 1 132 PRO 132 136 136 PRO PRO A . n A 1 133 CYS 133 137 137 CYS CYS A . n A 1 134 ALA 134 138 138 ALA ALA A . n A 1 135 SER 135 139 139 SER SER A . n A 1 136 MET 136 140 140 MET MET A . n A 1 137 ALA 137 141 141 ALA ALA A . n A 1 138 LEU 138 142 142 LEU LEU A . n A 1 139 GLN 139 143 143 GLN GLN A . n A 1 140 ILE 140 144 144 ILE ILE A . n A 1 141 LEU 141 145 145 LEU LEU A . n A 1 142 TRP 142 146 146 TRP TRP A . n A 1 143 GLU 143 147 147 GLU GLU A . n A 1 144 ALA 144 148 148 ALA ALA A . n A 1 145 ALA 145 149 149 ALA ALA A . n A 1 146 ARG 146 150 150 ARG ARG A . n A 1 147 HIS 147 151 151 HIS HIS A . n A 1 148 LEU 148 152 152 LEU LEU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 4DZ 1 201 1 4DZ SX1 A . C 3 GSH 1 202 1 GSH GTT A . D 4 BOG 1 203 2 BOG BOG A . E 4 BOG 1 204 3 BOG BOG A . F 5 PG4 1 205 4 PG4 PG4 A . G 6 PEG 1 206 5 PEG PG4 A . H 7 HOH 1 301 6 HOH HOH A . H 7 HOH 2 302 4 HOH HOH A . H 7 HOH 3 303 37 HOH HOH A . H 7 HOH 4 304 70 HOH HOH A . H 7 HOH 5 305 33 HOH HOH A . H 7 HOH 6 306 30 HOH HOH A . H 7 HOH 7 307 75 HOH HOH A . H 7 HOH 8 308 39 HOH HOH A . H 7 HOH 9 309 12 HOH HOH A . H 7 HOH 10 310 23 HOH HOH A . H 7 HOH 11 311 31 HOH HOH A . H 7 HOH 12 312 86 HOH HOH A . H 7 HOH 13 313 15 HOH HOH A . H 7 HOH 14 314 22 HOH HOH A . H 7 HOH 15 315 16 HOH HOH A . H 7 HOH 16 316 17 HOH HOH A . H 7 HOH 17 317 103 HOH HOH A . H 7 HOH 18 318 29 HOH HOH A . H 7 HOH 19 319 26 HOH HOH A . H 7 HOH 20 320 19 HOH HOH A . H 7 HOH 21 321 38 HOH HOH A . H 7 HOH 22 322 53 HOH HOH A . H 7 HOH 23 323 21 HOH HOH A . H 7 HOH 24 324 60 HOH HOH A . H 7 HOH 25 325 111 HOH HOH A . H 7 HOH 26 326 85 HOH HOH A . H 7 HOH 27 327 24 HOH HOH A . H 7 HOH 28 328 52 HOH HOH A . H 7 HOH 29 329 48 HOH HOH A . H 7 HOH 30 330 9 HOH HOH A . H 7 HOH 31 331 34 HOH HOH A . H 7 HOH 32 332 124 HOH HOH A . H 7 HOH 33 333 28 HOH HOH A . H 7 HOH 34 334 66 HOH HOH A . H 7 HOH 35 335 107 HOH HOH A . H 7 HOH 36 336 8 HOH HOH A . H 7 HOH 37 337 13 HOH HOH A . H 7 HOH 38 338 58 HOH HOH A . H 7 HOH 39 339 14 HOH HOH A . H 7 HOH 40 340 42 HOH HOH A . H 7 HOH 41 341 56 HOH HOH A . H 7 HOH 42 342 41 HOH HOH A . H 7 HOH 43 343 32 HOH HOH A . H 7 HOH 44 344 125 HOH HOH A . H 7 HOH 45 345 115 HOH HOH A . H 7 HOH 46 346 112 HOH HOH A . H 7 HOH 47 347 64 HOH HOH A . H 7 HOH 48 348 65 HOH HOH A . H 7 HOH 49 349 94 HOH HOH A . H 7 HOH 50 350 36 HOH HOH A . H 7 HOH 51 351 101 HOH HOH A . H 7 HOH 52 352 63 HOH HOH A . H 7 HOH 53 353 97 HOH HOH A . H 7 HOH 54 354 68 HOH HOH A . H 7 HOH 55 355 114 HOH HOH A . H 7 HOH 56 356 2 HOH HOH A . H 7 HOH 57 357 62 HOH HOH A . H 7 HOH 58 358 71 HOH HOH A . H 7 HOH 59 359 81 HOH HOH A . H 7 HOH 60 360 122 HOH HOH A . H 7 HOH 61 361 105 HOH HOH A . H 7 HOH 62 362 46 HOH HOH A . H 7 HOH 63 363 83 HOH HOH A . H 7 HOH 64 364 116 HOH HOH A . H 7 HOH 65 365 7 HOH HOH A . H 7 HOH 66 366 1 HOH HOH A . H 7 HOH 67 367 3 HOH HOH A . H 7 HOH 68 368 5 HOH HOH A . H 7 HOH 69 369 10 HOH HOH A . H 7 HOH 70 370 11 HOH HOH A . H 7 HOH 71 371 18 HOH HOH A . H 7 HOH 72 372 20 HOH HOH A . H 7 HOH 73 373 25 HOH HOH A . H 7 HOH 74 374 27 HOH HOH A . H 7 HOH 75 375 35 HOH HOH A . H 7 HOH 76 376 40 HOH HOH A . H 7 HOH 77 377 43 HOH HOH A . H 7 HOH 78 378 44 HOH HOH A . H 7 HOH 79 379 45 HOH HOH A . H 7 HOH 80 380 47 HOH HOH A . H 7 HOH 81 381 49 HOH HOH A . H 7 HOH 82 382 50 HOH HOH A . H 7 HOH 83 383 51 HOH HOH A . H 7 HOH 84 384 54 HOH HOH A . H 7 HOH 85 385 55 HOH HOH A . H 7 HOH 86 386 57 HOH HOH A . H 7 HOH 87 387 59 HOH HOH A . H 7 HOH 88 388 61 HOH HOH A . H 7 HOH 89 389 67 HOH HOH A . H 7 HOH 90 390 69 HOH HOH A . H 7 HOH 91 391 72 HOH HOH A . H 7 HOH 92 392 73 HOH HOH A . H 7 HOH 93 393 74 HOH HOH A . H 7 HOH 94 394 76 HOH HOH A . H 7 HOH 95 395 77 HOH HOH A . H 7 HOH 96 396 78 HOH HOH A . H 7 HOH 97 397 79 HOH HOH A . H 7 HOH 98 398 80 HOH HOH A . H 7 HOH 99 399 82 HOH HOH A . H 7 HOH 100 400 84 HOH HOH A . H 7 HOH 101 401 87 HOH HOH A . H 7 HOH 102 402 88 HOH HOH A . H 7 HOH 103 403 89 HOH HOH A . H 7 HOH 104 404 90 HOH HOH A . H 7 HOH 105 405 91 HOH HOH A . H 7 HOH 106 406 92 HOH HOH A . H 7 HOH 107 407 93 HOH HOH A . H 7 HOH 108 408 95 HOH HOH A . H 7 HOH 109 409 96 HOH HOH A . H 7 HOH 110 410 98 HOH HOH A . H 7 HOH 111 411 99 HOH HOH A . H 7 HOH 112 412 100 HOH HOH A . H 7 HOH 113 413 102 HOH HOH A . H 7 HOH 114 414 104 HOH HOH A . H 7 HOH 115 415 106 HOH HOH A . H 7 HOH 116 416 108 HOH HOH A . H 7 HOH 117 417 109 HOH HOH A . H 7 HOH 118 418 110 HOH HOH A . H 7 HOH 119 419 113 HOH HOH A . H 7 HOH 120 420 117 HOH HOH A . H 7 HOH 121 421 118 HOH HOH A . H 7 HOH 122 422 119 HOH HOH A . H 7 HOH 123 423 120 HOH HOH A . H 7 HOH 124 424 121 HOH HOH A . H 7 HOH 125 425 123 HOH HOH A . H 7 HOH 126 426 126 HOH HOH A . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id CSO _pdbx_struct_mod_residue.label_seq_id 55 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id CSO _pdbx_struct_mod_residue.auth_seq_id 59 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id CYS _pdbx_struct_mod_residue.details 'modified residue' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 14460 ? 1 MORE -47 ? 1 'SSA (A^2)' 19070 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5000000000 -0.8660254038 0.0000000000 0.0000000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5000000000 0.8660254038 0.0000000000 0.0000000000 -0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 343 ? H HOH . 2 1 A HOH 357 ? H HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-06-10 2 'Structure model' 1 1 2015-07-08 3 'Structure model' 1 2 2017-11-22 4 'Structure model' 1 3 2020-07-29 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' 6 3 'Structure model' 'Source and taxonomy' 7 4 'Structure model' 'Data collection' 8 4 'Structure model' 'Derived calculations' 9 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' citation 2 3 'Structure model' entity_src_gen 3 3 'Structure model' pdbx_struct_oper_list 4 3 'Structure model' pdbx_validate_close_contact 5 3 'Structure model' software 6 4 'Structure model' chem_comp 7 4 'Structure model' entity 8 4 'Structure model' pdbx_chem_comp_identifier 9 4 'Structure model' pdbx_entity_nonpoly 10 4 'Structure model' struct_site 11 4 'Structure model' struct_site_gen # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_citation.journal_id_CSD' 2 3 'Structure model' '_entity_src_gen.pdbx_alt_source_flag' 3 3 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 4 4 'Structure model' '_chem_comp.mon_nstd_flag' 5 4 'Structure model' '_chem_comp.name' 6 4 'Structure model' '_chem_comp.type' 7 4 'Structure model' '_entity.pdbx_description' 8 4 'Structure model' '_pdbx_entity_nonpoly.name' # _phasing.method MR # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? MOSFLM ? ? ? . 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? d*TREK ? ? ? . 2 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 3 ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0049 4 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.15 5 ? 'model building' ? ? ? ? ? ? ? ? ? ? ? Coot ? ? ? . 6 # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 400 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 5.98 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 40 ? CG ? A ARG 36 CG 2 1 Y 1 A ARG 40 ? CD ? A ARG 36 CD 3 1 Y 1 A ARG 40 ? NE ? A ARG 36 NE 4 1 Y 1 A ARG 40 ? CZ ? A ARG 36 CZ 5 1 Y 1 A ARG 40 ? NH1 ? A ARG 36 NH1 6 1 Y 1 A ARG 40 ? NH2 ? A ARG 36 NH2 # _pdbx_chem_comp_identifier.comp_id BOG _pdbx_chem_comp_identifier.type 'IUPAC CARBOHYDRATE SYMBOL' _pdbx_chem_comp_identifier.program PDB-CARE _pdbx_chem_comp_identifier.program_version 1.0 _pdbx_chem_comp_identifier.identifier b-octylglucoside # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '2-(9-chloro-1H-phenanthro[9,10-d]imidazol-2-yl)benzene-1,3-dicarbonitrile' 4DZ 3 GLUTATHIONE GSH 4 'octyl beta-D-glucopyranoside' BOG 5 'TETRAETHYLENE GLYCOL' PG4 6 'DI(HYDROXYETHYL)ETHER' PEG 7 water HOH #