data_4YME # _entry.id 4YME # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4YME pdb_00004yme 10.2210/pdb4yme/pdb WWPDB D_1000207619 ? ? # _pdbx_database_related.db_name TargetTrack _pdbx_database_related.details . _pdbx_database_related.db_id JCSG-430430 _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 4YME _pdbx_database_status.recvd_initial_deposition_date 2015-03-06 _pdbx_database_status.SG_entry Y _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Joint Center for Structural Genomics (JCSG)' 1 'Shapiro, L.' 2 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To be published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title ;Crystal structure of a sensory box/GGDEF family protein (CC_0091) from Caulobacter crescentus CB15 at 1.40 A resolution (PSI Community Target, Shapiro) ; _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 4YME _cell.details ? _cell.formula_units_Z ? _cell.length_a 37.429 _cell.length_a_esd ? _cell.length_b 49.416 _cell.length_b_esd ? _cell.length_c 82.905 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 4YME _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'sensory box/GGDEF family protein' 16774.033 1 ? ? 'UNP residues 372-528' ? 2 water nat water 18.015 186 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GAEHDGLTGLLNRNSLQ(MSE)RLAAAIDRVEASGESLAVICIDLDHFKEANDQHGHLAGDALLVETARRLQSAVQAPSF AARLGGDEFIVVQIAGGDQPAVAAELAGRLIE(MSE)LAAPVPFDGQELA(MSE)GSSLGVSLYPDDGRTAEAL(MSE)A NAD(MSE)ALYRAKESGR ; _entity_poly.pdbx_seq_one_letter_code_can ;GAEHDGLTGLLNRNSLQMRLAAAIDRVEASGESLAVICIDLDHFKEANDQHGHLAGDALLVETARRLQSAVQAPSFAARL GGDEFIVVQIAGGDQPAVAAELAGRLIEMLAAPVPFDGQELAMGSSLGVSLYPDDGRTAEALMANADMALYRAKESGR ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier JCSG-430430 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ALA n 1 3 GLU n 1 4 HIS n 1 5 ASP n 1 6 GLY n 1 7 LEU n 1 8 THR n 1 9 GLY n 1 10 LEU n 1 11 LEU n 1 12 ASN n 1 13 ARG n 1 14 ASN n 1 15 SER n 1 16 LEU n 1 17 GLN n 1 18 MSE n 1 19 ARG n 1 20 LEU n 1 21 ALA n 1 22 ALA n 1 23 ALA n 1 24 ILE n 1 25 ASP n 1 26 ARG n 1 27 VAL n 1 28 GLU n 1 29 ALA n 1 30 SER n 1 31 GLY n 1 32 GLU n 1 33 SER n 1 34 LEU n 1 35 ALA n 1 36 VAL n 1 37 ILE n 1 38 CYS n 1 39 ILE n 1 40 ASP n 1 41 LEU n 1 42 ASP n 1 43 HIS n 1 44 PHE n 1 45 LYS n 1 46 GLU n 1 47 ALA n 1 48 ASN n 1 49 ASP n 1 50 GLN n 1 51 HIS n 1 52 GLY n 1 53 HIS n 1 54 LEU n 1 55 ALA n 1 56 GLY n 1 57 ASP n 1 58 ALA n 1 59 LEU n 1 60 LEU n 1 61 VAL n 1 62 GLU n 1 63 THR n 1 64 ALA n 1 65 ARG n 1 66 ARG n 1 67 LEU n 1 68 GLN n 1 69 SER n 1 70 ALA n 1 71 VAL n 1 72 GLN n 1 73 ALA n 1 74 PRO n 1 75 SER n 1 76 PHE n 1 77 ALA n 1 78 ALA n 1 79 ARG n 1 80 LEU n 1 81 GLY n 1 82 GLY n 1 83 ASP n 1 84 GLU n 1 85 PHE n 1 86 ILE n 1 87 VAL n 1 88 VAL n 1 89 GLN n 1 90 ILE n 1 91 ALA n 1 92 GLY n 1 93 GLY n 1 94 ASP n 1 95 GLN n 1 96 PRO n 1 97 ALA n 1 98 VAL n 1 99 ALA n 1 100 ALA n 1 101 GLU n 1 102 LEU n 1 103 ALA n 1 104 GLY n 1 105 ARG n 1 106 LEU n 1 107 ILE n 1 108 GLU n 1 109 MSE n 1 110 LEU n 1 111 ALA n 1 112 ALA n 1 113 PRO n 1 114 VAL n 1 115 PRO n 1 116 PHE n 1 117 ASP n 1 118 GLY n 1 119 GLN n 1 120 GLU n 1 121 LEU n 1 122 ALA n 1 123 MSE n 1 124 GLY n 1 125 SER n 1 126 SER n 1 127 LEU n 1 128 GLY n 1 129 VAL n 1 130 SER n 1 131 LEU n 1 132 TYR n 1 133 PRO n 1 134 ASP n 1 135 ASP n 1 136 GLY n 1 137 ARG n 1 138 THR n 1 139 ALA n 1 140 GLU n 1 141 ALA n 1 142 LEU n 1 143 MSE n 1 144 ALA n 1 145 ASN n 1 146 ALA n 1 147 ASP n 1 148 MSE n 1 149 ALA n 1 150 LEU n 1 151 TYR n 1 152 ARG n 1 153 ALA n 1 154 LYS n 1 155 GLU n 1 156 SER n 1 157 GLY n 1 158 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 158 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene CC_0091 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 19089 / CB15' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Caulobacter crescentus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 190650 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia Coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain PB1 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Y091_CAUCR _struct_ref.pdbx_db_accession Q9ABX9 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;AEHDGLTGLLNRNSLQMRLAAAIDRVEASGESLAVICIDLDHFKEANDQHGHLAGDALLVETARRLQSAVQAPSFAARLG GDEFIVVQIAGGDQPAVAAELAGRLIEMLAAPVPFDGQELAMGSSLGVSLYPDDGRTAEALMANADMALYRAKESGR ; _struct_ref.pdbx_align_begin 372 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4YME _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 158 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9ABX9 _struct_ref_seq.db_align_beg 372 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 528 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 372 _struct_ref_seq.pdbx_auth_seq_align_end 528 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 4YME _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q9ABX9 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 371 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 4YME _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.11 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 41.67 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.2M magnesium formate, 20% polyethylene glycol 3350' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details 'Vertical focusing mirror; double crystal Si(111) monochromator' _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2014-12-06 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'double crystal Si(111)' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97952 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRL BEAMLINE BL14-1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97952 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL14-1 _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.B_iso_Wilson_estimate 19.725 _reflns.entry_id 4YME _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.40 _reflns.d_resolution_low 23.679 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 30788 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I -3.000 _reflns.percent_possible_obs 98.300 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs 0.999 _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.17 _reflns.pdbx_Rmerge_I_obs 0.030 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 15.620 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.038 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 145154 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 1.400 1.450 ? 1.4 ? 14061 5849 ? 5650 96.600 ? ? 0.563 ? 0.946 ? ? ? ? ? ? ? ? ? ? ? ? ? 1.187 ? ? 1 1 ? ? 1.450 1.510 ? 2.3 ? 14933 6049 ? 6007 99.300 ? ? 0.794 ? 0.568 ? ? ? ? ? ? ? ? ? ? ? ? ? 0.716 ? ? 2 ? ? ? 1.510 1.580 ? 3.7 ? 14614 5883 ? 5858 99.600 ? ? 0.921 ? 0.338 ? ? ? ? ? ? ? ? ? ? ? ? ? 0.425 ? ? 3 ? ? ? 1.580 1.660 ? 5.3 ? 14096 5635 ? 5612 99.600 ? ? 0.959 ? 0.223 ? ? ? ? ? ? ? ? ? ? ? ? ? 0.280 ? ? 4 ? ? ? 1.660 1.760 ? 7.4 ? 14190 5660 ? 5625 99.400 ? ? 0.978 ? 0.155 ? ? ? ? ? ? ? ? ? ? ? ? ? 0.194 ? ? 5 ? ? ? 1.760 1.900 ? 11.6 ? 15090 6028 ? 5971 99.100 ? ? 0.993 ? 0.087 ? ? ? ? ? ? ? ? ? ? ? ? ? 0.110 ? ? 6 ? ? ? 1.900 2.090 ? 18.8 ? 14503 5819 ? 5729 98.500 ? ? 0.997 ? 0.048 ? ? ? ? ? ? ? ? ? ? ? ? ? 0.060 ? ? 7 ? ? ? 2.090 2.390 ? 27.9 ? 14742 5863 ? 5785 98.700 ? ? 0.998 ? 0.030 ? ? ? ? ? ? ? ? ? ? ? ? ? 0.039 ? ? 8 ? ? ? 2.390 3.010 ? 35.4 ? 14676 5858 ? 5743 98.000 ? ? 0.999 ? 0.022 ? ? ? ? ? ? ? ? ? ? ? ? ? 0.028 ? ? 9 ? ? ? 3.010 ? ? 43.5 ? 14249 5931 ? 5581 94.100 ? ? 0.999 ? 0.018 ? ? ? ? ? ? ? ? ? ? ? ? ? 0.023 ? ? 10 ? ? ? # _refine.aniso_B[1][1] 2.2700 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][2] -1.5500 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] -0.7300 _refine.B_iso_max 74.790 _refine.B_iso_mean 26.8077 _refine.B_iso_min 13.570 _refine.correlation_coeff_Fo_to_Fc 0.9690 _refine.correlation_coeff_Fo_to_Fc_free 0.9560 _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. ATOM RECORDS CONTAIN SUM OF TLS AND RESIDUAL B FACTORS. 3. ANISOU RECORDS CONTAIN SUM OF TLS AND RESIDUAL U FACTORS. 4. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 5. THE SAD PHASES WERE USED AS RESTRAINTS DURING REFINEMENT ; _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 4YME _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.4000 _refine.ls_d_res_low 23.679 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 30733 _refine.ls_number_reflns_R_free 1546 _refine.ls_number_reflns_R_work 29187 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.0000 _refine.ls_percent_reflns_R_free 5.0000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1839 _refine.ls_R_factor_R_free 0.2048 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1827 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max 1.000 _refine.occupancy_min 0.230 _refine.solvent_model_details MASK _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.0640 _refine.pdbx_overall_ESU_R_Free 0.0640 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 2.9390 _refine.overall_SU_ML 0.0540 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1142 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 186 _refine_hist.number_atoms_total 1328 _refine_hist.d_res_high 1.4000 _refine_hist.d_res_low 23.679 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.020 0.022 1256 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 1215 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.785 1.969 1720 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.015 3.000 2806 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 5.883 5.000 186 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 35.803 24.839 62 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 12.982 15.000 217 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 15.752 15.000 11 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.113 0.200 196 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.008 0.020 1509 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 282 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? 1.673 2.091 655 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 1.665 2.086 654 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 2.735 3.130 825 ? r_mcangle_it ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.4000 _refine_ls_shell.d_res_low 1.4360 _refine_ls_shell.number_reflns_all 2162 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 117 _refine_ls_shell.number_reflns_R_work 2045 _refine_ls_shell.percent_reflns_obs 95.8300 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.3780 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.3560 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 4YME _struct.title ;Crystal structure of a sensory box/GGDEF family protein (CC_0091) from Caulobacter crescentus CB15 at 1.40 A resolution (PSI Community Target, Shapiro) ; _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 4YME _struct_keywords.text ;GGDEF domain, PF00990 family, ferredoxin-like fold, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-BIOLOGY, LYASE ; _struct_keywords.pdbx_keywords LYASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASN A 12 ? GLY A 31 ? ASN A 382 GLY A 401 1 ? 20 HELX_P HELX_P2 AA2 HIS A 43 ? GLY A 52 ? HIS A 413 GLY A 422 1 ? 10 HELX_P HELX_P3 AA3 GLY A 52 ? VAL A 71 ? GLY A 422 VAL A 441 1 ? 20 HELX_P HELX_P4 AA4 ASP A 94 ? LEU A 110 ? ASP A 464 LEU A 480 1 ? 17 HELX_P HELX_P5 AA5 THR A 138 ? GLY A 157 ? THR A 508 GLY A 527 1 ? 20 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GLN 17 C ? ? ? 1_555 A MSE 18 N ? ? A GLN 387 A MSE 388 1_555 ? ? ? ? ? ? ? 1.340 ? ? covale2 covale both ? A MSE 18 C ? ? ? 1_555 A ARG 19 N ? ? A MSE 388 A ARG 389 1_555 ? ? ? ? ? ? ? 1.313 ? ? covale3 covale both ? A GLU 108 C ? ? ? 1_555 A MSE 109 N ? ? A GLU 478 A MSE 479 1_555 ? ? ? ? ? ? ? 1.319 ? ? covale4 covale both ? A MSE 109 C ? ? ? 1_555 A LEU 110 N ? ? A MSE 479 A LEU 480 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale5 covale both ? A ALA 122 C ? ? ? 1_555 A MSE 123 N ? ? A ALA 492 A MSE 493 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale6 covale both ? A MSE 123 C ? ? ? 1_555 A GLY 124 N ? ? A MSE 493 A GLY 494 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale7 covale both ? A LEU 142 C ? ? ? 1_555 A MSE 143 N ? ? A LEU 512 A MSE 513 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale8 covale both ? A MSE 143 C ? ? ? 1_555 A ALA 144 N ? ? A MSE 513 A ALA 514 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale9 covale both ? A ASP 147 C ? ? ? 1_555 A MSE 148 N ? ? A ASP 517 A MSE 518 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale10 covale both ? A MSE 148 C ? ? ? 1_555 A ALA 149 N ? ? A MSE 518 A ALA 519 1_555 ? ? ? ? ? ? ? 1.328 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ALA 73 A . ? ALA 443 A PRO 74 A ? PRO 444 A 1 17.13 2 TYR 132 A . ? TYR 502 A PRO 133 A ? PRO 503 A 1 -0.79 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 PHE A 76 ? GLY A 81 ? PHE A 446 GLY A 451 AA1 2 GLU A 84 ? ALA A 91 ? GLU A 454 ALA A 461 AA1 3 SER A 33 ? LEU A 41 ? SER A 403 LEU A 411 AA1 4 SER A 125 ? LEU A 131 ? SER A 495 LEU A 501 AA2 1 VAL A 114 ? PHE A 116 ? VAL A 484 PHE A 486 AA2 2 GLN A 119 ? LEU A 121 ? GLN A 489 LEU A 491 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N PHE A 76 ? N PHE A 446 O VAL A 88 ? O VAL A 458 AA1 2 3 O PHE A 85 ? O PHE A 455 N ILE A 39 ? N ILE A 409 AA1 3 4 N VAL A 36 ? N VAL A 406 O SER A 130 ? O SER A 500 AA2 1 2 N PHE A 116 ? N PHE A 486 O GLN A 119 ? O GLN A 489 # _atom_sites.entry_id 4YME _atom_sites.fract_transf_matrix[1][1] 0.026717 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020236 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012062 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 371 ? ? ? A . n A 1 2 ALA 2 372 372 ALA ALA A . n A 1 3 GLU 3 373 373 GLU GLU A . n A 1 4 HIS 4 374 374 HIS HIS A . n A 1 5 ASP 5 375 375 ASP ASP A . n A 1 6 GLY 6 376 376 GLY GLY A . n A 1 7 LEU 7 377 377 LEU LEU A . n A 1 8 THR 8 378 378 THR THR A . n A 1 9 GLY 9 379 379 GLY GLY A . n A 1 10 LEU 10 380 380 LEU LEU A . n A 1 11 LEU 11 381 381 LEU LEU A . n A 1 12 ASN 12 382 382 ASN ASN A . n A 1 13 ARG 13 383 383 ARG ARG A . n A 1 14 ASN 14 384 384 ASN ASN A . n A 1 15 SER 15 385 385 SER SER A . n A 1 16 LEU 16 386 386 LEU LEU A . n A 1 17 GLN 17 387 387 GLN GLN A . n A 1 18 MSE 18 388 388 MSE MSE A . n A 1 19 ARG 19 389 389 ARG ARG A . n A 1 20 LEU 20 390 390 LEU LEU A . n A 1 21 ALA 21 391 391 ALA ALA A . n A 1 22 ALA 22 392 392 ALA ALA A . n A 1 23 ALA 23 393 393 ALA ALA A . n A 1 24 ILE 24 394 394 ILE ILE A . n A 1 25 ASP 25 395 395 ASP ASP A . n A 1 26 ARG 26 396 396 ARG ARG A . n A 1 27 VAL 27 397 397 VAL VAL A . n A 1 28 GLU 28 398 398 GLU GLU A . n A 1 29 ALA 29 399 399 ALA ALA A . n A 1 30 SER 30 400 400 SER SER A . n A 1 31 GLY 31 401 401 GLY GLY A . n A 1 32 GLU 32 402 402 GLU GLU A . n A 1 33 SER 33 403 403 SER SER A . n A 1 34 LEU 34 404 404 LEU LEU A . n A 1 35 ALA 35 405 405 ALA ALA A . n A 1 36 VAL 36 406 406 VAL VAL A . n A 1 37 ILE 37 407 407 ILE ILE A . n A 1 38 CYS 38 408 408 CYS CYS A . n A 1 39 ILE 39 409 409 ILE ILE A . n A 1 40 ASP 40 410 410 ASP ASP A . n A 1 41 LEU 41 411 411 LEU LEU A . n A 1 42 ASP 42 412 412 ASP ASP A . n A 1 43 HIS 43 413 413 HIS HIS A . n A 1 44 PHE 44 414 414 PHE PHE A . n A 1 45 LYS 45 415 415 LYS LYS A . n A 1 46 GLU 46 416 416 GLU GLU A . n A 1 47 ALA 47 417 417 ALA ALA A . n A 1 48 ASN 48 418 418 ASN ASN A . n A 1 49 ASP 49 419 419 ASP ASP A . n A 1 50 GLN 50 420 420 GLN GLN A . n A 1 51 HIS 51 421 421 HIS HIS A . n A 1 52 GLY 52 422 422 GLY GLY A . n A 1 53 HIS 53 423 423 HIS HIS A . n A 1 54 LEU 54 424 424 LEU LEU A . n A 1 55 ALA 55 425 425 ALA ALA A . n A 1 56 GLY 56 426 426 GLY GLY A . n A 1 57 ASP 57 427 427 ASP ASP A . n A 1 58 ALA 58 428 428 ALA ALA A . n A 1 59 LEU 59 429 429 LEU LEU A . n A 1 60 LEU 60 430 430 LEU LEU A . n A 1 61 VAL 61 431 431 VAL VAL A . n A 1 62 GLU 62 432 432 GLU GLU A . n A 1 63 THR 63 433 433 THR THR A . n A 1 64 ALA 64 434 434 ALA ALA A . n A 1 65 ARG 65 435 435 ARG ARG A . n A 1 66 ARG 66 436 436 ARG ARG A . n A 1 67 LEU 67 437 437 LEU LEU A . n A 1 68 GLN 68 438 438 GLN GLN A . n A 1 69 SER 69 439 439 SER SER A . n A 1 70 ALA 70 440 440 ALA ALA A . n A 1 71 VAL 71 441 441 VAL VAL A . n A 1 72 GLN 72 442 442 GLN GLN A . n A 1 73 ALA 73 443 443 ALA ALA A . n A 1 74 PRO 74 444 444 PRO PRO A . n A 1 75 SER 75 445 445 SER SER A . n A 1 76 PHE 76 446 446 PHE PHE A . n A 1 77 ALA 77 447 447 ALA ALA A . n A 1 78 ALA 78 448 448 ALA ALA A . n A 1 79 ARG 79 449 449 ARG ARG A . n A 1 80 LEU 80 450 450 LEU LEU A . n A 1 81 GLY 81 451 451 GLY GLY A . n A 1 82 GLY 82 452 452 GLY GLY A . n A 1 83 ASP 83 453 453 ASP ASP A . n A 1 84 GLU 84 454 454 GLU GLU A . n A 1 85 PHE 85 455 455 PHE PHE A . n A 1 86 ILE 86 456 456 ILE ILE A . n A 1 87 VAL 87 457 457 VAL VAL A . n A 1 88 VAL 88 458 458 VAL VAL A . n A 1 89 GLN 89 459 459 GLN GLN A . n A 1 90 ILE 90 460 460 ILE ILE A . n A 1 91 ALA 91 461 461 ALA ALA A . n A 1 92 GLY 92 462 462 GLY GLY A . n A 1 93 GLY 93 463 463 GLY GLY A . n A 1 94 ASP 94 464 464 ASP ASP A . n A 1 95 GLN 95 465 465 GLN GLN A . n A 1 96 PRO 96 466 466 PRO PRO A . n A 1 97 ALA 97 467 467 ALA ALA A . n A 1 98 VAL 98 468 468 VAL VAL A . n A 1 99 ALA 99 469 469 ALA ALA A . n A 1 100 ALA 100 470 470 ALA ALA A . n A 1 101 GLU 101 471 471 GLU GLU A . n A 1 102 LEU 102 472 472 LEU LEU A . n A 1 103 ALA 103 473 473 ALA ALA A . n A 1 104 GLY 104 474 474 GLY GLY A . n A 1 105 ARG 105 475 475 ARG ARG A . n A 1 106 LEU 106 476 476 LEU LEU A . n A 1 107 ILE 107 477 477 ILE ILE A . n A 1 108 GLU 108 478 478 GLU GLU A . n A 1 109 MSE 109 479 479 MSE MSE A . n A 1 110 LEU 110 480 480 LEU LEU A . n A 1 111 ALA 111 481 481 ALA ALA A . n A 1 112 ALA 112 482 482 ALA ALA A . n A 1 113 PRO 113 483 483 PRO PRO A . n A 1 114 VAL 114 484 484 VAL VAL A . n A 1 115 PRO 115 485 485 PRO PRO A . n A 1 116 PHE 116 486 486 PHE PHE A . n A 1 117 ASP 117 487 487 ASP ASP A . n A 1 118 GLY 118 488 488 GLY GLY A . n A 1 119 GLN 119 489 489 GLN GLN A . n A 1 120 GLU 120 490 490 GLU GLU A . n A 1 121 LEU 121 491 491 LEU LEU A . n A 1 122 ALA 122 492 492 ALA ALA A . n A 1 123 MSE 123 493 493 MSE MSE A . n A 1 124 GLY 124 494 494 GLY GLY A . n A 1 125 SER 125 495 495 SER SER A . n A 1 126 SER 126 496 496 SER SER A . n A 1 127 LEU 127 497 497 LEU LEU A . n A 1 128 GLY 128 498 498 GLY GLY A . n A 1 129 VAL 129 499 499 VAL VAL A . n A 1 130 SER 130 500 500 SER SER A . n A 1 131 LEU 131 501 501 LEU LEU A . n A 1 132 TYR 132 502 502 TYR TYR A . n A 1 133 PRO 133 503 503 PRO PRO A . n A 1 134 ASP 134 504 504 ASP ASP A . n A 1 135 ASP 135 505 505 ASP ASP A . n A 1 136 GLY 136 506 506 GLY GLY A . n A 1 137 ARG 137 507 507 ARG ARG A . n A 1 138 THR 138 508 508 THR THR A . n A 1 139 ALA 139 509 509 ALA ALA A . n A 1 140 GLU 140 510 510 GLU GLU A . n A 1 141 ALA 141 511 511 ALA ALA A . n A 1 142 LEU 142 512 512 LEU LEU A . n A 1 143 MSE 143 513 513 MSE MSE A . n A 1 144 ALA 144 514 514 ALA ALA A . n A 1 145 ASN 145 515 515 ASN ASN A . n A 1 146 ALA 146 516 516 ALA ALA A . n A 1 147 ASP 147 517 517 ASP ASP A . n A 1 148 MSE 148 518 518 MSE MSE A . n A 1 149 ALA 149 519 519 ALA ALA A . n A 1 150 LEU 150 520 520 LEU LEU A . n A 1 151 TYR 151 521 521 TYR TYR A . n A 1 152 ARG 152 522 522 ARG ARG A . n A 1 153 ALA 153 523 523 ALA ALA A . n A 1 154 LYS 154 524 524 LYS LYS A . n A 1 155 GLU 155 525 525 GLU GLU A . n A 1 156 SER 156 526 526 SER SER A . n A 1 157 GLY 157 527 527 GLY GLY A . n A 1 158 ARG 158 528 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name PSI:Biology _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 601 939 HOH HOH A . B 2 HOH 2 602 1068 HOH HOH A . B 2 HOH 3 603 1074 HOH HOH A . B 2 HOH 4 604 969 HOH HOH A . B 2 HOH 5 605 993 HOH HOH A . B 2 HOH 6 606 978 HOH HOH A . B 2 HOH 7 607 951 HOH HOH A . B 2 HOH 8 608 1000 HOH HOH A . B 2 HOH 9 609 1071 HOH HOH A . B 2 HOH 10 610 1022 HOH HOH A . B 2 HOH 11 611 1019 HOH HOH A . B 2 HOH 12 612 976 HOH HOH A . B 2 HOH 13 613 1032 HOH HOH A . B 2 HOH 14 614 933 HOH HOH A . B 2 HOH 15 615 1028 HOH HOH A . B 2 HOH 16 616 1046 HOH HOH A . B 2 HOH 17 617 1033 HOH HOH A . B 2 HOH 18 618 1026 HOH HOH A . B 2 HOH 19 619 1086 HOH HOH A . B 2 HOH 20 620 961 HOH HOH A . B 2 HOH 21 621 1006 HOH HOH A . B 2 HOH 22 622 921 HOH HOH A . B 2 HOH 23 623 914 HOH HOH A . B 2 HOH 24 624 991 HOH HOH A . B 2 HOH 25 625 918 HOH HOH A . B 2 HOH 26 626 952 HOH HOH A . B 2 HOH 27 627 1029 HOH HOH A . B 2 HOH 28 628 1031 HOH HOH A . B 2 HOH 29 629 924 HOH HOH A . B 2 HOH 30 630 937 HOH HOH A . B 2 HOH 31 631 916 HOH HOH A . B 2 HOH 32 632 1037 HOH HOH A . B 2 HOH 33 633 1070 HOH HOH A . B 2 HOH 34 634 1052 HOH HOH A . B 2 HOH 35 635 965 HOH HOH A . B 2 HOH 36 636 1027 HOH HOH A . B 2 HOH 37 637 1020 HOH HOH A . B 2 HOH 38 638 1018 HOH HOH A . B 2 HOH 39 639 946 HOH HOH A . B 2 HOH 40 640 1001 HOH HOH A . B 2 HOH 41 641 1054 HOH HOH A . B 2 HOH 42 642 979 HOH HOH A . B 2 HOH 43 643 1057 HOH HOH A . B 2 HOH 44 644 926 HOH HOH A . B 2 HOH 45 645 941 HOH HOH A . B 2 HOH 46 646 908 HOH HOH A . B 2 HOH 47 647 1045 HOH HOH A . B 2 HOH 48 648 997 HOH HOH A . B 2 HOH 49 649 1007 HOH HOH A . B 2 HOH 50 650 1030 HOH HOH A . B 2 HOH 51 651 1023 HOH HOH A . B 2 HOH 52 652 943 HOH HOH A . B 2 HOH 53 653 928 HOH HOH A . B 2 HOH 54 654 911 HOH HOH A . B 2 HOH 55 655 919 HOH HOH A . B 2 HOH 56 656 1012 HOH HOH A . B 2 HOH 57 657 907 HOH HOH A . B 2 HOH 58 658 1038 HOH HOH A . B 2 HOH 59 659 989 HOH HOH A . B 2 HOH 60 660 1041 HOH HOH A . B 2 HOH 61 661 930 HOH HOH A . B 2 HOH 62 662 942 HOH HOH A . B 2 HOH 63 663 1035 HOH HOH A . B 2 HOH 64 664 903 HOH HOH A . B 2 HOH 65 665 950 HOH HOH A . B 2 HOH 66 666 967 HOH HOH A . B 2 HOH 67 667 910 HOH HOH A . B 2 HOH 68 668 1058 HOH HOH A . B 2 HOH 69 669 938 HOH HOH A . B 2 HOH 70 670 953 HOH HOH A . B 2 HOH 71 671 1034 HOH HOH A . B 2 HOH 72 672 984 HOH HOH A . B 2 HOH 73 673 1021 HOH HOH A . B 2 HOH 74 674 1051 HOH HOH A . B 2 HOH 75 675 915 HOH HOH A . B 2 HOH 76 676 906 HOH HOH A . B 2 HOH 77 677 986 HOH HOH A . B 2 HOH 78 678 949 HOH HOH A . B 2 HOH 79 679 1040 HOH HOH A . B 2 HOH 80 680 901 HOH HOH A . B 2 HOH 81 681 931 HOH HOH A . B 2 HOH 82 682 966 HOH HOH A . B 2 HOH 83 683 905 HOH HOH A . B 2 HOH 84 684 963 HOH HOH A . B 2 HOH 85 685 1044 HOH HOH A . B 2 HOH 86 686 904 HOH HOH A . B 2 HOH 87 687 902 HOH HOH A . B 2 HOH 88 688 1072 HOH HOH A . B 2 HOH 89 689 923 HOH HOH A . B 2 HOH 90 690 1024 HOH HOH A . B 2 HOH 91 691 917 HOH HOH A . B 2 HOH 92 692 936 HOH HOH A . B 2 HOH 93 693 981 HOH HOH A . B 2 HOH 94 694 929 HOH HOH A . B 2 HOH 95 695 1017 HOH HOH A . B 2 HOH 96 696 1010 HOH HOH A . B 2 HOH 97 697 1015 HOH HOH A . B 2 HOH 98 698 934 HOH HOH A . B 2 HOH 99 699 1055 HOH HOH A . B 2 HOH 100 700 968 HOH HOH A . B 2 HOH 101 701 970 HOH HOH A . B 2 HOH 102 702 1053 HOH HOH A . B 2 HOH 103 703 944 HOH HOH A . B 2 HOH 104 704 1042 HOH HOH A . B 2 HOH 105 705 974 HOH HOH A . B 2 HOH 106 706 980 HOH HOH A . B 2 HOH 107 707 973 HOH HOH A . B 2 HOH 108 708 912 HOH HOH A . B 2 HOH 109 709 909 HOH HOH A . B 2 HOH 110 710 971 HOH HOH A . B 2 HOH 111 711 925 HOH HOH A . B 2 HOH 112 712 948 HOH HOH A . B 2 HOH 113 713 998 HOH HOH A . B 2 HOH 114 714 927 HOH HOH A . B 2 HOH 115 715 1003 HOH HOH A . B 2 HOH 116 716 977 HOH HOH A . B 2 HOH 117 717 932 HOH HOH A . B 2 HOH 118 718 1016 HOH HOH A . B 2 HOH 119 719 1009 HOH HOH A . B 2 HOH 120 720 1059 HOH HOH A . B 2 HOH 121 721 922 HOH HOH A . B 2 HOH 122 722 1025 HOH HOH A . B 2 HOH 123 723 920 HOH HOH A . B 2 HOH 124 724 945 HOH HOH A . B 2 HOH 125 725 940 HOH HOH A . B 2 HOH 126 726 1005 HOH HOH A . B 2 HOH 127 727 1039 HOH HOH A . B 2 HOH 128 728 1065 HOH HOH A . B 2 HOH 129 729 990 HOH HOH A . B 2 HOH 130 730 935 HOH HOH A . B 2 HOH 131 731 1036 HOH HOH A . B 2 HOH 132 732 1056 HOH HOH A . B 2 HOH 133 733 1043 HOH HOH A . B 2 HOH 134 734 975 HOH HOH A . B 2 HOH 135 735 1083 HOH HOH A . B 2 HOH 136 736 1069 HOH HOH A . B 2 HOH 137 737 1060 HOH HOH A . B 2 HOH 138 738 982 HOH HOH A . B 2 HOH 139 739 1011 HOH HOH A . B 2 HOH 140 740 1048 HOH HOH A . B 2 HOH 141 741 1014 HOH HOH A . B 2 HOH 142 742 1066 HOH HOH A . B 2 HOH 143 743 1047 HOH HOH A . B 2 HOH 144 744 1079 HOH HOH A . B 2 HOH 145 745 1082 HOH HOH A . B 2 HOH 146 746 987 HOH HOH A . B 2 HOH 147 747 1084 HOH HOH A . B 2 HOH 148 748 913 HOH HOH A . B 2 HOH 149 749 947 HOH HOH A . B 2 HOH 150 750 1085 HOH HOH A . B 2 HOH 151 751 992 HOH HOH A . B 2 HOH 152 752 983 HOH HOH A . B 2 HOH 153 753 1049 HOH HOH A . B 2 HOH 154 754 994 HOH HOH A . B 2 HOH 155 755 972 HOH HOH A . B 2 HOH 156 756 1081 HOH HOH A . B 2 HOH 157 757 1080 HOH HOH A . B 2 HOH 158 758 1004 HOH HOH A . B 2 HOH 159 759 1002 HOH HOH A . B 2 HOH 160 760 988 HOH HOH A . B 2 HOH 161 761 1078 HOH HOH A . B 2 HOH 162 762 1064 HOH HOH A . B 2 HOH 163 763 1077 HOH HOH A . B 2 HOH 164 764 962 HOH HOH A . B 2 HOH 165 765 1050 HOH HOH A . B 2 HOH 166 766 1062 HOH HOH A . B 2 HOH 167 767 1063 HOH HOH A . B 2 HOH 168 768 995 HOH HOH A . B 2 HOH 169 769 956 HOH HOH A . B 2 HOH 170 770 955 HOH HOH A . B 2 HOH 171 771 985 HOH HOH A . B 2 HOH 172 772 999 HOH HOH A . B 2 HOH 173 773 960 HOH HOH A . B 2 HOH 174 774 996 HOH HOH A . B 2 HOH 175 775 1061 HOH HOH A . B 2 HOH 176 776 964 HOH HOH A . B 2 HOH 177 777 1008 HOH HOH A . B 2 HOH 178 778 959 HOH HOH A . B 2 HOH 179 779 1076 HOH HOH A . B 2 HOH 180 780 958 HOH HOH A . B 2 HOH 181 781 954 HOH HOH A . B 2 HOH 182 782 957 HOH HOH A . B 2 HOH 183 783 1075 HOH HOH A . B 2 HOH 184 784 1073 HOH HOH A . B 2 HOH 185 785 1013 HOH HOH A . B 2 HOH 186 786 1067 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 18 A MSE 388 ? MET 'modified residue' 2 A MSE 109 A MSE 479 ? MET 'modified residue' 3 A MSE 123 A MSE 493 ? MET 'modified residue' 4 A MSE 143 A MSE 513 ? MET 'modified residue' 5 A MSE 148 A MSE 518 ? MET 'modified residue' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-04-01 2 'Structure model' 1 1 2017-11-22 3 'Structure model' 1 2 2018-01-24 4 'Structure model' 1 3 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Derived calculations' 2 2 'Structure model' 'Refinement description' 3 2 'Structure model' 'Source and taxonomy' 4 3 'Structure model' 'Database references' 5 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' entity_src_gen 2 2 'Structure model' pdbx_struct_assembly 3 2 'Structure model' pdbx_struct_oper_list 4 2 'Structure model' software 5 3 'Structure model' citation_author 6 4 'Structure model' database_2 7 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_entity_src_gen.pdbx_alt_source_flag' 2 2 'Structure model' '_pdbx_struct_assembly.oligomeric_details' 3 2 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 4 2 'Structure model' '_software.classification' 5 3 'Structure model' '_citation_author.name' 6 4 'Structure model' '_database_2.pdbx_DOI' 7 4 'Structure model' '_database_2.pdbx_database_accession' 8 4 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_refine_tls.id 1 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 21.9336 _pdbx_refine_tls.origin_y 17.3673 _pdbx_refine_tls.origin_z 9.2369 _pdbx_refine_tls.T[1][1] 0.0114 _pdbx_refine_tls.T[1][1]_esd ? _pdbx_refine_tls.T[1][2] -0.0028 _pdbx_refine_tls.T[1][2]_esd ? _pdbx_refine_tls.T[1][3] 0.0108 _pdbx_refine_tls.T[1][3]_esd ? _pdbx_refine_tls.T[2][2] 0.0073 _pdbx_refine_tls.T[2][2]_esd ? _pdbx_refine_tls.T[2][3] -0.0016 _pdbx_refine_tls.T[2][3]_esd ? _pdbx_refine_tls.T[3][3] 0.0138 _pdbx_refine_tls.T[3][3]_esd ? _pdbx_refine_tls.L[1][1] 0.2404 _pdbx_refine_tls.L[1][1]_esd ? _pdbx_refine_tls.L[1][2] -0.2939 _pdbx_refine_tls.L[1][2]_esd ? _pdbx_refine_tls.L[1][3] 0.0214 _pdbx_refine_tls.L[1][3]_esd ? _pdbx_refine_tls.L[2][2] 0.7286 _pdbx_refine_tls.L[2][2]_esd ? _pdbx_refine_tls.L[2][3] 0.1570 _pdbx_refine_tls.L[2][3]_esd ? _pdbx_refine_tls.L[3][3] 0.4256 _pdbx_refine_tls.L[3][3]_esd ? _pdbx_refine_tls.S[1][1] -0.0191 _pdbx_refine_tls.S[1][1]_esd ? _pdbx_refine_tls.S[1][2] 0.0128 _pdbx_refine_tls.S[1][2]_esd ? _pdbx_refine_tls.S[1][3] -0.0133 _pdbx_refine_tls.S[1][3]_esd ? _pdbx_refine_tls.S[2][1] -0.0159 _pdbx_refine_tls.S[2][1]_esd ? _pdbx_refine_tls.S[2][2] -0.0102 _pdbx_refine_tls.S[2][2]_esd ? _pdbx_refine_tls.S[2][3] -0.0034 _pdbx_refine_tls.S[2][3]_esd ? _pdbx_refine_tls.S[3][1] -0.0078 _pdbx_refine_tls.S[3][1]_esd ? _pdbx_refine_tls.S[3][2] 0.0223 _pdbx_refine_tls.S[3][2]_esd ? _pdbx_refine_tls.S[3][3] 0.0293 _pdbx_refine_tls.S[3][3]_esd ? # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 372 _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 527 _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details ? # _phasing.method SAD # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.10 1 ? phasing ? ? ? ? ? ? ? ? ? ? ? SHELX ? ? ? . 2 ? phasing ? ? ? ? ? ? ? ? ? ? ? SHARP ? ? ? . 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? 'November 3, 2014 BUILT=20141118' 4 ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0103 5 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 6 ? phasing ? ? ? ? ? ? ? ? ? ? ? SHELXD ? ? ? . 7 # _pdbx_entry_details.compound_details ? _pdbx_entry_details.entry_id 4YME _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE CONSTRUCT (372-528) WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. ; _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 NE _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 449 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CZ _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ARG _pdbx_validate_rmsd_angle.auth_seq_id_2 449 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 NH1 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ARG _pdbx_validate_rmsd_angle.auth_seq_id_3 449 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 123.85 _pdbx_validate_rmsd_angle.angle_target_value 120.30 _pdbx_validate_rmsd_angle.angle_deviation 3.55 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.50 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 MSE A 493 ? ? -103.50 -145.64 2 1 MSE A 493 ? ? -97.50 -148.68 # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 786 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 6.78 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 371 ? A GLY 1 2 1 Y 1 A ARG 528 ? A ARG 158 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #