data_4C4P # _entry.id 4C4P # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4C4P PDBE EBI-58228 WWPDB D_1290058228 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4C4P _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2013-09-07 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Sultana, A.' 1 'Khan, A.R.' 2 # _citation.id primary _citation.title 'Structural and Functional Analysis of Fip2 Binding to the Endosome-Localised Rab25 Gtpase' _citation.journal_abbrev Biochim.Biophys.Acta _citation.journal_volume 1834 _citation.page_first 2679 _citation.page_last ? _citation.year 2013 _citation.journal_id_ASTM BBACAQ _citation.country NE _citation.journal_id_ISSN 0006-3002 _citation.journal_id_CSD 0113 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24056041 _citation.pdbx_database_id_DOI 10.1016/J.BBAPAP.2013.09.005 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Lall, P.' 1 primary 'Horgan, C.P.' 2 primary 'Oda, S.' 3 primary 'Franklin, E.' 4 primary 'Sultana, A.' 5 primary 'Hanscomb, S.R.' 6 primary 'Mccaffrey, M.W.' 7 primary 'Khan, A.R.' 8 # _cell.entry_id 4C4P _cell.length_a 64.560 _cell.length_b 64.560 _cell.length_c 112.860 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4C4P _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'RAS-RELATED PROTEIN RAB-11A' 19515.906 1 ? ? 'RESIDUES 1-173' ? 2 polymer man 'RAB11 FAMILY-INTERACTING PROTEIN 2' 12289.915 1 ? ? 'RAB-BINDING DOMAIN, RESIDUES 410-512' ? 3 non-polymer syn 'PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER' 522.196 1 ? ? ? ? 4 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 5 water nat water 18.015 176 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'RAB-11, YL8' 2 'RAB11-FIP2, NRIP11' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAY YRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTN VEAAFQTILTEIY ; ;MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAY YRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTN VEAAFQTILTEIY ; A ? 2 'polypeptide(L)' no no ;GAMAAKFRASNIMPSSSFHMSPTSNEDLRKIPDSNPFDATAGYRSLTYEEVLQELVKHKELLRRKDTHIRELEDYIDNLL VRVMEETPSILRVPYEPSRKAGKFSNS ; ;GAMAAKFRASNIMPSSSFHMSPTSNEDLRKIPDSNPFDATAGYRSLTYEEVLQELVKHKELLRRKDTHIRELEDYIDNLL VRVMEETPSILRVPYEPSRKAGKFSNS ; B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 THR n 1 4 ARG n 1 5 ASP n 1 6 ASP n 1 7 GLU n 1 8 TYR n 1 9 ASP n 1 10 TYR n 1 11 LEU n 1 12 PHE n 1 13 LYS n 1 14 VAL n 1 15 VAL n 1 16 LEU n 1 17 ILE n 1 18 GLY n 1 19 ASP n 1 20 SER n 1 21 GLY n 1 22 VAL n 1 23 GLY n 1 24 LYS n 1 25 SER n 1 26 ASN n 1 27 LEU n 1 28 LEU n 1 29 SER n 1 30 ARG n 1 31 PHE n 1 32 THR n 1 33 ARG n 1 34 ASN n 1 35 GLU n 1 36 PHE n 1 37 ASN n 1 38 LEU n 1 39 GLU n 1 40 SER n 1 41 LYS n 1 42 SER n 1 43 THR n 1 44 ILE n 1 45 GLY n 1 46 VAL n 1 47 GLU n 1 48 PHE n 1 49 ALA n 1 50 THR n 1 51 ARG n 1 52 SER n 1 53 ILE n 1 54 GLN n 1 55 VAL n 1 56 ASP n 1 57 GLY n 1 58 LYS n 1 59 THR n 1 60 ILE n 1 61 LYS n 1 62 ALA n 1 63 GLN n 1 64 ILE n 1 65 TRP n 1 66 ASP n 1 67 THR n 1 68 ALA n 1 69 GLY n 1 70 GLN n 1 71 GLU n 1 72 ARG n 1 73 TYR n 1 74 ARG n 1 75 ALA n 1 76 ILE n 1 77 THR n 1 78 SER n 1 79 ALA n 1 80 TYR n 1 81 TYR n 1 82 ARG n 1 83 GLY n 1 84 ALA n 1 85 VAL n 1 86 GLY n 1 87 ALA n 1 88 LEU n 1 89 LEU n 1 90 VAL n 1 91 TYR n 1 92 ASP n 1 93 ILE n 1 94 ALA n 1 95 LYS n 1 96 HIS n 1 97 LEU n 1 98 THR n 1 99 TYR n 1 100 GLU n 1 101 ASN n 1 102 VAL n 1 103 GLU n 1 104 ARG n 1 105 TRP n 1 106 LEU n 1 107 LYS n 1 108 GLU n 1 109 LEU n 1 110 ARG n 1 111 ASP n 1 112 HIS n 1 113 ALA n 1 114 ASP n 1 115 SER n 1 116 ASN n 1 117 ILE n 1 118 VAL n 1 119 ILE n 1 120 MET n 1 121 LEU n 1 122 VAL n 1 123 GLY n 1 124 ASN n 1 125 LYS n 1 126 SER n 1 127 ASP n 1 128 LEU n 1 129 ARG n 1 130 HIS n 1 131 LEU n 1 132 ARG n 1 133 ALA n 1 134 VAL n 1 135 PRO n 1 136 THR n 1 137 ASP n 1 138 GLU n 1 139 ALA n 1 140 ARG n 1 141 ALA n 1 142 PHE n 1 143 ALA n 1 144 GLU n 1 145 LYS n 1 146 ASN n 1 147 GLY n 1 148 LEU n 1 149 SER n 1 150 PHE n 1 151 ILE n 1 152 GLU n 1 153 THR n 1 154 SER n 1 155 ALA n 1 156 LEU n 1 157 ASP n 1 158 SER n 1 159 THR n 1 160 ASN n 1 161 VAL n 1 162 GLU n 1 163 ALA n 1 164 ALA n 1 165 PHE n 1 166 GLN n 1 167 THR n 1 168 ILE n 1 169 LEU n 1 170 THR n 1 171 GLU n 1 172 ILE n 1 173 TYR n 2 1 GLY n 2 2 ALA n 2 3 MET n 2 4 ALA n 2 5 ALA n 2 6 LYS n 2 7 PHE n 2 8 ARG n 2 9 ALA n 2 10 SER n 2 11 ASN n 2 12 ILE n 2 13 MET n 2 14 PRO n 2 15 SER n 2 16 SER n 2 17 SER n 2 18 PHE n 2 19 HIS n 2 20 MET n 2 21 SER n 2 22 PRO n 2 23 THR n 2 24 SER n 2 25 ASN n 2 26 GLU n 2 27 ASP n 2 28 LEU n 2 29 ARG n 2 30 LYS n 2 31 ILE n 2 32 PRO n 2 33 ASP n 2 34 SER n 2 35 ASN n 2 36 PRO n 2 37 PHE n 2 38 ASP n 2 39 ALA n 2 40 THR n 2 41 ALA n 2 42 GLY n 2 43 TYR n 2 44 ARG n 2 45 SER n 2 46 LEU n 2 47 THR n 2 48 TYR n 2 49 GLU n 2 50 GLU n 2 51 VAL n 2 52 LEU n 2 53 GLN n 2 54 GLU n 2 55 LEU n 2 56 VAL n 2 57 LYS n 2 58 HIS n 2 59 LYS n 2 60 GLU n 2 61 LEU n 2 62 LEU n 2 63 ARG n 2 64 ARG n 2 65 LYS n 2 66 ASP n 2 67 THR n 2 68 HIS n 2 69 ILE n 2 70 ARG n 2 71 GLU n 2 72 LEU n 2 73 GLU n 2 74 ASP n 2 75 TYR n 2 76 ILE n 2 77 ASP n 2 78 ASN n 2 79 LEU n 2 80 LEU n 2 81 VAL n 2 82 ARG n 2 83 VAL n 2 84 MET n 2 85 GLU n 2 86 GLU n 2 87 THR n 2 88 PRO n 2 89 SER n 2 90 ILE n 2 91 LEU n 2 92 ARG n 2 93 VAL n 2 94 PRO n 2 95 TYR n 2 96 GLU n 2 97 PRO n 2 98 SER n 2 99 ARG n 2 100 LYS n 2 101 ALA n 2 102 GLY n 2 103 LYS n 2 104 PHE n 2 105 SER n 2 106 ASN n 2 107 SER n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? HUMAN ? ? ? ? ? ? ? ? 'HOMO SAPIENS' 9606 ? ? ? ? ? ? ? ? 'ESCHERICHIA COLI' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? PLASMID PET15B ? ? ? ? ? 2 1 sample ? ? ? HUMAN ? ? ? ? ? ? ? ? 'HOMO SAPIENS' 9606 ? ? ? ? ? ? ? ? 'ESCHERICHIA COLI' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? PLASMID PET15B ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP RB11A_HUMAN 1 ? ? P62491 ? 2 UNP RFIP2_HUMAN 2 ? ? Q7L804 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4C4P A 1 ? 173 ? P62491 1 ? 173 ? 1 173 2 2 4C4P B 5 ? 107 ? Q7L804 410 ? 512 ? 410 512 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 2 4C4P GLY B 1 ? UNP Q7L804 ? ? 'expression tag' 406 1 2 4C4P ALA B 2 ? UNP Q7L804 ? ? 'expression tag' 407 2 2 4C4P MET B 3 ? UNP Q7L804 ? ? 'expression tag' 408 3 2 4C4P ALA B 4 ? UNP Q7L804 ? ? 'expression tag' 409 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GNP non-polymer . 'PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER' ? 'C10 H17 N6 O13 P3' 522.196 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4C4P _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.13 _exptl_crystal.density_percent_sol 42.38 _exptl_crystal.description NONE # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC CCD' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.976 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID14-2' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID14-2 _diffrn_source.pdbx_wavelength 0.976 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4C4P _reflns.observed_criterion_sigma_I 1.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 40.00 _reflns.d_resolution_high 2.00 _reflns.number_obs 18989 _reflns.number_all ? _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.05 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 26.70 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 8.9 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4C4P _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 18980 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.36 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 27.955 _refine.ls_d_res_high 2.000 _refine.ls_percent_reflns_obs 99.94 _refine.ls_R_factor_obs 0.1826 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1804 _refine.ls_R_factor_R_free 0.2234 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.2 _refine.ls_number_reflns_R_free 979 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model NONE _refine.pdbx_method_to_determine_struct OTHER _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.22 _refine.pdbx_overall_phase_error 19.53 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1804 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 33 _refine_hist.number_atoms_solvent 176 _refine_hist.number_atoms_total 2013 _refine_hist.d_res_high 2.000 _refine_hist.d_res_low 27.955 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.008 ? ? 1939 'X-RAY DIFFRACTION' ? f_angle_d 1.026 ? ? 2646 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 15.960 ? ? 747 'X-RAY DIFFRACTION' ? f_chiral_restr 0.051 ? ? 302 'X-RAY DIFFRACTION' ? f_plane_restr 0.003 ? ? 333 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all 'X-RAY DIFFRACTION' . 2.0001 2.1056 2513 0.1914 100.00 0.2351 . . 143 . . 'X-RAY DIFFRACTION' . 2.1056 2.2374 2537 0.1794 100.00 0.2460 . . 137 . . 'X-RAY DIFFRACTION' . 2.2374 2.4101 2534 0.1761 100.00 0.2282 . . 136 . . 'X-RAY DIFFRACTION' . 2.4101 2.6525 2545 0.1795 100.00 0.2268 . . 141 . . 'X-RAY DIFFRACTION' . 2.6525 3.0359 2552 0.1879 100.00 0.2326 . . 145 . . 'X-RAY DIFFRACTION' . 3.0359 3.8233 2596 0.1778 100.00 0.2274 . . 145 . . 'X-RAY DIFFRACTION' . 3.8233 27.9580 2724 0.1790 100.00 0.2070 . . 132 . . # _struct.entry_id 4C4P _struct.title 'Crystal Structure of Wild-Type Rab11 Complexed to FIP2' _struct.pdbx_descriptor 'RAS-RELATED PROTEIN RAB-11A, RAB11 FAMILY-INTERACTING PROTEIN 2' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4C4P _struct_keywords.pdbx_keywords 'PROTEIN TRANSPORT' _struct_keywords.text 'PROTEIN TRANSPORT, EFFECTOR, VESICLE TRAFFICKING, ENDOSOMES' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 23 ? ASN A 34 ? GLY A 23 ASN A 34 1 ? 12 HELX_P HELX_P2 2 ILE A 76 ? ARG A 82 ? ILE A 76 ARG A 82 1 ? 7 HELX_P HELX_P3 3 LYS A 95 ? ASN A 101 ? LYS A 95 ASN A 101 1 ? 7 HELX_P HELX_P4 4 ASN A 101 ? ALA A 113 ? ASN A 101 ALA A 113 1 ? 13 HELX_P HELX_P5 5 LEU A 128 ? ARG A 132 ? LEU A 128 ARG A 132 5 ? 5 HELX_P HELX_P6 6 PRO A 135 ? ASN A 146 ? PRO A 135 ASN A 146 1 ? 12 HELX_P HELX_P7 7 ASN A 160 ? GLU A 171 ? ASN A 160 GLU A 171 1 ? 12 HELX_P HELX_P8 8 THR B 47 ? THR B 87 ? THR B 452 THR B 492 1 ? 41 HELX_P HELX_P9 9 PRO B 88 ? ILE B 90 ? PRO B 493 ILE B 495 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? C GNP . O1G ? ? ? 1_555 D MG . MG ? ? A GNP 1174 A MG 1175 1_555 ? ? ? ? ? ? ? 1.940 ? metalc2 metalc ? ? C GNP . O2B ? ? ? 1_555 D MG . MG ? ? A GNP 1174 A MG 1175 1_555 ? ? ? ? ? ? ? 2.044 ? metalc3 metalc ? ? D MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 1175 A HOH 2022 1_555 ? ? ? ? ? ? ? 2.076 ? metalc4 metalc ? ? D MG . MG ? ? ? 1_555 A THR 43 OG1 ? ? A MG 1175 A THR 43 1_555 ? ? ? ? ? ? ? 2.082 ? metalc5 metalc ? ? D MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 1175 A HOH 2024 1_555 ? ? ? ? ? ? ? 2.074 ? metalc6 metalc ? ? D MG . MG ? ? ? 1_555 A SER 25 OG ? ? A MG 1175 A SER 25 1_555 ? ? ? ? ? ? ? 2.049 ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id VAL _struct_mon_prot_cis.label_seq_id 93 _struct_mon_prot_cis.label_asym_id B _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id VAL _struct_mon_prot_cis.auth_seq_id 498 _struct_mon_prot_cis.auth_asym_id B _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 94 _struct_mon_prot_cis.pdbx_label_asym_id_2 B _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 499 _struct_mon_prot_cis.pdbx_auth_asym_id_2 B _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -2.83 # _struct_sheet.id AA _struct_sheet.type ? _struct_sheet.number_strands 7 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? parallel AA 2 3 ? parallel AA 3 4 ? parallel AA 4 5 ? parallel AA 5 6 ? anti-parallel AA 6 7 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 SER A 149 ? GLU A 152 ? SER A 149 GLU A 152 AA 2 VAL A 118 ? ASN A 124 ? VAL A 118 ASN A 124 AA 3 ALA A 84 ? ASP A 92 ? ALA A 84 ASP A 92 AA 4 TYR A 10 ? ILE A 17 ? TYR A 10 ILE A 17 AA 5 LYS A 58 ? THR A 67 ? LYS A 58 THR A 67 AA 6 VAL A 46 ? VAL A 55 ? VAL A 46 VAL A 55 AA 7 ARG B 92 ? VAL B 93 ? ARG B 497 VAL B 498 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N SER A 149 ? N SER A 149 O ILE A 119 ? O ILE A 119 AA 2 3 N VAL A 118 ? N VAL A 118 O VAL A 85 ? O VAL A 85 AA 3 4 N VAL A 85 ? N VAL A 85 O LYS A 13 ? O LYS A 13 AA 4 5 N PHE A 12 ? N PHE A 12 O LYS A 61 ? O LYS A 61 AA 5 6 N ASP A 66 ? N ASP A 66 O GLU A 47 ? O GLU A 47 AA 6 7 N THR A 50 ? N THR A 50 O VAL B 93 ? O VAL B 498 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 28 'BINDING SITE FOR RESIDUE GNP A 1174' AC2 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE MG A 1175' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 28 SER A 20 ? SER A 20 . ? 1_555 ? 2 AC1 28 GLY A 21 ? GLY A 21 . ? 1_555 ? 3 AC1 28 VAL A 22 ? VAL A 22 . ? 1_555 ? 4 AC1 28 GLY A 23 ? GLY A 23 . ? 1_555 ? 5 AC1 28 LYS A 24 ? LYS A 24 . ? 1_555 ? 6 AC1 28 SER A 25 ? SER A 25 . ? 1_555 ? 7 AC1 28 ASN A 26 ? ASN A 26 . ? 1_555 ? 8 AC1 28 PHE A 36 ? PHE A 36 . ? 1_555 ? 9 AC1 28 ASN A 37 ? ASN A 37 . ? 1_555 ? 10 AC1 28 LEU A 38 ? LEU A 38 . ? 1_555 ? 11 AC1 28 SER A 40 ? SER A 40 . ? 1_555 ? 12 AC1 28 SER A 42 ? SER A 42 . ? 1_555 ? 13 AC1 28 THR A 43 ? THR A 43 . ? 1_555 ? 14 AC1 28 ALA A 68 ? ALA A 68 . ? 1_555 ? 15 AC1 28 GLY A 69 ? GLY A 69 . ? 1_555 ? 16 AC1 28 ASN A 124 ? ASN A 124 . ? 1_555 ? 17 AC1 28 LYS A 125 ? LYS A 125 . ? 1_555 ? 18 AC1 28 ASP A 127 ? ASP A 127 . ? 1_555 ? 19 AC1 28 LEU A 128 ? LEU A 128 . ? 1_555 ? 20 AC1 28 SER A 154 ? SER A 154 . ? 1_555 ? 21 AC1 28 ALA A 155 ? ALA A 155 . ? 1_555 ? 22 AC1 28 LEU A 156 ? LEU A 156 . ? 1_555 ? 23 AC1 28 MG D . ? MG A 1175 . ? 1_555 ? 24 AC1 28 HOH E . ? HOH A 2022 . ? 1_555 ? 25 AC1 28 HOH E . ? HOH A 2024 . ? 1_555 ? 26 AC1 28 HOH E . ? HOH A 2041 . ? 1_555 ? 27 AC1 28 HOH E . ? HOH A 2130 . ? 1_555 ? 28 AC1 28 HOH E . ? HOH A 2131 . ? 1_555 ? 29 AC2 5 SER A 25 ? SER A 25 . ? 1_555 ? 30 AC2 5 THR A 43 ? THR A 43 . ? 1_555 ? 31 AC2 5 GNP C . ? GNP A 1174 . ? 1_555 ? 32 AC2 5 HOH E . ? HOH A 2022 . ? 1_555 ? 33 AC2 5 HOH E . ? HOH A 2024 . ? 1_555 ? # _database_PDB_matrix.entry_id 4C4P _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4C4P _atom_sites.fract_transf_matrix[1][1] 0.015489 _atom_sites.fract_transf_matrix[1][2] 0.008943 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017886 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008861 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 GLY 2 2 ? ? ? A . n A 1 3 THR 3 3 ? ? ? A . n A 1 4 ARG 4 4 ? ? ? A . n A 1 5 ASP 5 5 ? ? ? A . n A 1 6 ASP 6 6 ? ? ? A . n A 1 7 GLU 7 7 7 GLU GLU A . n A 1 8 TYR 8 8 8 TYR TYR A . n A 1 9 ASP 9 9 9 ASP ASP A . n A 1 10 TYR 10 10 10 TYR TYR A . n A 1 11 LEU 11 11 11 LEU LEU A . n A 1 12 PHE 12 12 12 PHE PHE A . n A 1 13 LYS 13 13 13 LYS LYS A . n A 1 14 VAL 14 14 14 VAL VAL A . n A 1 15 VAL 15 15 15 VAL VAL A . n A 1 16 LEU 16 16 16 LEU LEU A . n A 1 17 ILE 17 17 17 ILE ILE A . n A 1 18 GLY 18 18 18 GLY GLY A . n A 1 19 ASP 19 19 19 ASP ASP A . n A 1 20 SER 20 20 20 SER SER A . n A 1 21 GLY 21 21 21 GLY GLY A . n A 1 22 VAL 22 22 22 VAL VAL A . n A 1 23 GLY 23 23 23 GLY GLY A . n A 1 24 LYS 24 24 24 LYS LYS A . n A 1 25 SER 25 25 25 SER SER A . n A 1 26 ASN 26 26 26 ASN ASN A . n A 1 27 LEU 27 27 27 LEU LEU A . n A 1 28 LEU 28 28 28 LEU LEU A . n A 1 29 SER 29 29 29 SER SER A . n A 1 30 ARG 30 30 30 ARG ARG A . n A 1 31 PHE 31 31 31 PHE PHE A . n A 1 32 THR 32 32 32 THR THR A . n A 1 33 ARG 33 33 33 ARG ARG A . n A 1 34 ASN 34 34 34 ASN ASN A . n A 1 35 GLU 35 35 35 GLU GLU A . n A 1 36 PHE 36 36 36 PHE PHE A . n A 1 37 ASN 37 37 37 ASN ASN A . n A 1 38 LEU 38 38 38 LEU LEU A . n A 1 39 GLU 39 39 39 GLU GLU A . n A 1 40 SER 40 40 40 SER SER A . n A 1 41 LYS 41 41 41 LYS LYS A . n A 1 42 SER 42 42 42 SER SER A . n A 1 43 THR 43 43 43 THR THR A . n A 1 44 ILE 44 44 44 ILE ILE A . n A 1 45 GLY 45 45 45 GLY GLY A . n A 1 46 VAL 46 46 46 VAL VAL A . n A 1 47 GLU 47 47 47 GLU GLU A . n A 1 48 PHE 48 48 48 PHE PHE A . n A 1 49 ALA 49 49 49 ALA ALA A . n A 1 50 THR 50 50 50 THR THR A . n A 1 51 ARG 51 51 51 ARG ARG A . n A 1 52 SER 52 52 52 SER SER A . n A 1 53 ILE 53 53 53 ILE ILE A . n A 1 54 GLN 54 54 54 GLN GLN A . n A 1 55 VAL 55 55 55 VAL VAL A . n A 1 56 ASP 56 56 56 ASP ASP A . n A 1 57 GLY 57 57 57 GLY GLY A . n A 1 58 LYS 58 58 58 LYS LYS A . n A 1 59 THR 59 59 59 THR THR A . n A 1 60 ILE 60 60 60 ILE ILE A . n A 1 61 LYS 61 61 61 LYS LYS A . n A 1 62 ALA 62 62 62 ALA ALA A . n A 1 63 GLN 63 63 63 GLN GLN A . n A 1 64 ILE 64 64 64 ILE ILE A . n A 1 65 TRP 65 65 65 TRP TRP A . n A 1 66 ASP 66 66 66 ASP ASP A . n A 1 67 THR 67 67 67 THR THR A . n A 1 68 ALA 68 68 68 ALA ALA A . n A 1 69 GLY 69 69 69 GLY GLY A . n A 1 70 GLN 70 70 70 GLN GLN A . n A 1 71 GLU 71 71 71 GLU GLU A . n A 1 72 ARG 72 72 72 ARG ARG A . n A 1 73 TYR 73 73 73 TYR TYR A . n A 1 74 ARG 74 74 74 ARG ARG A . n A 1 75 ALA 75 75 75 ALA ALA A . n A 1 76 ILE 76 76 76 ILE ILE A . n A 1 77 THR 77 77 77 THR THR A . n A 1 78 SER 78 78 78 SER SER A . n A 1 79 ALA 79 79 79 ALA ALA A . n A 1 80 TYR 80 80 80 TYR TYR A . n A 1 81 TYR 81 81 81 TYR TYR A . n A 1 82 ARG 82 82 82 ARG ARG A . n A 1 83 GLY 83 83 83 GLY GLY A . n A 1 84 ALA 84 84 84 ALA ALA A . n A 1 85 VAL 85 85 85 VAL VAL A . n A 1 86 GLY 86 86 86 GLY GLY A . n A 1 87 ALA 87 87 87 ALA ALA A . n A 1 88 LEU 88 88 88 LEU LEU A . n A 1 89 LEU 89 89 89 LEU LEU A . n A 1 90 VAL 90 90 90 VAL VAL A . n A 1 91 TYR 91 91 91 TYR TYR A . n A 1 92 ASP 92 92 92 ASP ASP A . n A 1 93 ILE 93 93 93 ILE ILE A . n A 1 94 ALA 94 94 94 ALA ALA A . n A 1 95 LYS 95 95 95 LYS LYS A . n A 1 96 HIS 96 96 96 HIS HIS A . n A 1 97 LEU 97 97 97 LEU LEU A . n A 1 98 THR 98 98 98 THR THR A . n A 1 99 TYR 99 99 99 TYR TYR A . n A 1 100 GLU 100 100 100 GLU GLU A . n A 1 101 ASN 101 101 101 ASN ASN A . n A 1 102 VAL 102 102 102 VAL VAL A . n A 1 103 GLU 103 103 103 GLU GLU A . n A 1 104 ARG 104 104 104 ARG ARG A . n A 1 105 TRP 105 105 105 TRP TRP A . n A 1 106 LEU 106 106 106 LEU LEU A . n A 1 107 LYS 107 107 107 LYS LYS A . n A 1 108 GLU 108 108 108 GLU GLU A . n A 1 109 LEU 109 109 109 LEU LEU A . n A 1 110 ARG 110 110 110 ARG ARG A . n A 1 111 ASP 111 111 111 ASP ASP A . n A 1 112 HIS 112 112 112 HIS HIS A . n A 1 113 ALA 113 113 113 ALA ALA A . n A 1 114 ASP 114 114 114 ASP ASP A . n A 1 115 SER 115 115 115 SER SER A . n A 1 116 ASN 116 116 116 ASN ASN A . n A 1 117 ILE 117 117 117 ILE ILE A . n A 1 118 VAL 118 118 118 VAL VAL A . n A 1 119 ILE 119 119 119 ILE ILE A . n A 1 120 MET 120 120 120 MET MET A . n A 1 121 LEU 121 121 121 LEU LEU A . n A 1 122 VAL 122 122 122 VAL VAL A . n A 1 123 GLY 123 123 123 GLY GLY A . n A 1 124 ASN 124 124 124 ASN ASN A . n A 1 125 LYS 125 125 125 LYS LYS A . n A 1 126 SER 126 126 126 SER SER A . n A 1 127 ASP 127 127 127 ASP ASP A . n A 1 128 LEU 128 128 128 LEU LEU A . n A 1 129 ARG 129 129 129 ARG ARG A . n A 1 130 HIS 130 130 130 HIS HIS A . n A 1 131 LEU 131 131 131 LEU LEU A . n A 1 132 ARG 132 132 132 ARG ARG A . n A 1 133 ALA 133 133 133 ALA ALA A . n A 1 134 VAL 134 134 134 VAL VAL A . n A 1 135 PRO 135 135 135 PRO PRO A . n A 1 136 THR 136 136 136 THR THR A . n A 1 137 ASP 137 137 137 ASP ASP A . n A 1 138 GLU 138 138 138 GLU GLU A . n A 1 139 ALA 139 139 139 ALA ALA A . n A 1 140 ARG 140 140 140 ARG ARG A . n A 1 141 ALA 141 141 141 ALA ALA A . n A 1 142 PHE 142 142 142 PHE PHE A . n A 1 143 ALA 143 143 143 ALA ALA A . n A 1 144 GLU 144 144 144 GLU GLU A . n A 1 145 LYS 145 145 145 LYS LYS A . n A 1 146 ASN 146 146 146 ASN ASN A . n A 1 147 GLY 147 147 147 GLY GLY A . n A 1 148 LEU 148 148 148 LEU LEU A . n A 1 149 SER 149 149 149 SER SER A . n A 1 150 PHE 150 150 150 PHE PHE A . n A 1 151 ILE 151 151 151 ILE ILE A . n A 1 152 GLU 152 152 152 GLU GLU A . n A 1 153 THR 153 153 153 THR THR A . n A 1 154 SER 154 154 154 SER SER A . n A 1 155 ALA 155 155 155 ALA ALA A . n A 1 156 LEU 156 156 156 LEU LEU A . n A 1 157 ASP 157 157 157 ASP ASP A . n A 1 158 SER 158 158 158 SER SER A . n A 1 159 THR 159 159 159 THR THR A . n A 1 160 ASN 160 160 160 ASN ASN A . n A 1 161 VAL 161 161 161 VAL VAL A . n A 1 162 GLU 162 162 162 GLU GLU A . n A 1 163 ALA 163 163 163 ALA ALA A . n A 1 164 ALA 164 164 164 ALA ALA A . n A 1 165 PHE 165 165 165 PHE PHE A . n A 1 166 GLN 166 166 166 GLN GLN A . n A 1 167 THR 167 167 167 THR THR A . n A 1 168 ILE 168 168 168 ILE ILE A . n A 1 169 LEU 169 169 169 LEU LEU A . n A 1 170 THR 170 170 170 THR THR A . n A 1 171 GLU 171 171 171 GLU GLU A . n A 1 172 ILE 172 172 172 ILE ILE A . n A 1 173 TYR 173 173 173 TYR TYR A . n B 2 1 GLY 1 406 ? ? ? B . n B 2 2 ALA 2 407 ? ? ? B . n B 2 3 MET 3 408 ? ? ? B . n B 2 4 ALA 4 409 ? ? ? B . n B 2 5 ALA 5 410 ? ? ? B . n B 2 6 LYS 6 411 ? ? ? B . n B 2 7 PHE 7 412 ? ? ? B . n B 2 8 ARG 8 413 ? ? ? B . n B 2 9 ALA 9 414 ? ? ? B . n B 2 10 SER 10 415 ? ? ? B . n B 2 11 ASN 11 416 ? ? ? B . n B 2 12 ILE 12 417 ? ? ? B . n B 2 13 MET 13 418 ? ? ? B . n B 2 14 PRO 14 419 ? ? ? B . n B 2 15 SER 15 420 ? ? ? B . n B 2 16 SER 16 421 ? ? ? B . n B 2 17 SER 17 422 ? ? ? B . n B 2 18 PHE 18 423 ? ? ? B . n B 2 19 HIS 19 424 ? ? ? B . n B 2 20 MET 20 425 ? ? ? B . n B 2 21 SER 21 426 ? ? ? B . n B 2 22 PRO 22 427 ? ? ? B . n B 2 23 THR 23 428 ? ? ? B . n B 2 24 SER 24 429 ? ? ? B . n B 2 25 ASN 25 430 ? ? ? B . n B 2 26 GLU 26 431 ? ? ? B . n B 2 27 ASP 27 432 ? ? ? B . n B 2 28 LEU 28 433 ? ? ? B . n B 2 29 ARG 29 434 ? ? ? B . n B 2 30 LYS 30 435 ? ? ? B . n B 2 31 ILE 31 436 ? ? ? B . n B 2 32 PRO 32 437 ? ? ? B . n B 2 33 ASP 33 438 ? ? ? B . n B 2 34 SER 34 439 ? ? ? B . n B 2 35 ASN 35 440 ? ? ? B . n B 2 36 PRO 36 441 ? ? ? B . n B 2 37 PHE 37 442 ? ? ? B . n B 2 38 ASP 38 443 ? ? ? B . n B 2 39 ALA 39 444 ? ? ? B . n B 2 40 THR 40 445 ? ? ? B . n B 2 41 ALA 41 446 ? ? ? B . n B 2 42 GLY 42 447 ? ? ? B . n B 2 43 TYR 43 448 448 TYR TYR B . n B 2 44 ARG 44 449 449 ARG ARG B . n B 2 45 SER 45 450 450 SER SER B . n B 2 46 LEU 46 451 451 LEU LEU B . n B 2 47 THR 47 452 452 THR THR B . n B 2 48 TYR 48 453 453 TYR TYR B . n B 2 49 GLU 49 454 454 GLU GLU B . n B 2 50 GLU 50 455 455 GLU GLU B . n B 2 51 VAL 51 456 456 VAL VAL B . n B 2 52 LEU 52 457 457 LEU LEU B . n B 2 53 GLN 53 458 458 GLN GLN B . n B 2 54 GLU 54 459 459 GLU GLU B . n B 2 55 LEU 55 460 460 LEU LEU B . n B 2 56 VAL 56 461 461 VAL VAL B . n B 2 57 LYS 57 462 462 LYS LYS B . n B 2 58 HIS 58 463 463 HIS HIS B . n B 2 59 LYS 59 464 464 LYS LYS B . n B 2 60 GLU 60 465 465 GLU GLU B . n B 2 61 LEU 61 466 466 LEU LEU B . n B 2 62 LEU 62 467 467 LEU LEU B . n B 2 63 ARG 63 468 468 ARG ARG B . n B 2 64 ARG 64 469 469 ARG ARG B . n B 2 65 LYS 65 470 470 LYS LYS B . n B 2 66 ASP 66 471 471 ASP ASP B . n B 2 67 THR 67 472 472 THR THR B . n B 2 68 HIS 68 473 473 HIS HIS B . n B 2 69 ILE 69 474 474 ILE ILE B . n B 2 70 ARG 70 475 475 ARG ARG B . n B 2 71 GLU 71 476 476 GLU GLU B . n B 2 72 LEU 72 477 477 LEU LEU B . n B 2 73 GLU 73 478 478 GLU GLU B . n B 2 74 ASP 74 479 479 ASP ASP B . n B 2 75 TYR 75 480 480 TYR TYR B . n B 2 76 ILE 76 481 481 ILE ILE B . n B 2 77 ASP 77 482 482 ASP ASP B . n B 2 78 ASN 78 483 483 ASN ASN B . n B 2 79 LEU 79 484 484 LEU LEU B . n B 2 80 LEU 80 485 485 LEU LEU B . n B 2 81 VAL 81 486 486 VAL VAL B . n B 2 82 ARG 82 487 487 ARG ARG B . n B 2 83 VAL 83 488 488 VAL VAL B . n B 2 84 MET 84 489 489 MET MET B . n B 2 85 GLU 85 490 490 GLU GLU B . n B 2 86 GLU 86 491 491 GLU GLU B . n B 2 87 THR 87 492 492 THR THR B . n B 2 88 PRO 88 493 493 PRO PRO B . n B 2 89 SER 89 494 494 SER SER B . n B 2 90 ILE 90 495 495 ILE ILE B . n B 2 91 LEU 91 496 496 LEU LEU B . n B 2 92 ARG 92 497 497 ARG ARG B . n B 2 93 VAL 93 498 498 VAL VAL B . n B 2 94 PRO 94 499 499 PRO PRO B . n B 2 95 TYR 95 500 500 TYR TYR B . n B 2 96 GLU 96 501 501 GLU GLU B . n B 2 97 PRO 97 502 502 PRO PRO B . n B 2 98 SER 98 503 503 SER SER B . n B 2 99 ARG 99 504 ? ? ? B . n B 2 100 LYS 100 505 ? ? ? B . n B 2 101 ALA 101 506 ? ? ? B . n B 2 102 GLY 102 507 ? ? ? B . n B 2 103 LYS 103 508 ? ? ? B . n B 2 104 PHE 104 509 ? ? ? B . n B 2 105 SER 105 510 ? ? ? B . n B 2 106 ASN 106 511 ? ? ? B . n B 2 107 SER 107 512 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 GNP 1 1174 1174 GNP GNP A . D 4 MG 1 1175 1175 MG MG A . E 5 HOH 1 2001 2001 HOH HOH A . E 5 HOH 2 2002 2002 HOH HOH A . E 5 HOH 3 2003 2003 HOH HOH A . E 5 HOH 4 2004 2004 HOH HOH A . E 5 HOH 5 2005 2005 HOH HOH A . E 5 HOH 6 2006 2006 HOH HOH A . E 5 HOH 7 2007 2007 HOH HOH A . E 5 HOH 8 2008 2008 HOH HOH A . E 5 HOH 9 2009 2009 HOH HOH A . E 5 HOH 10 2010 2010 HOH HOH A . E 5 HOH 11 2011 2011 HOH HOH A . E 5 HOH 12 2012 2012 HOH HOH A . E 5 HOH 13 2013 2013 HOH HOH A . E 5 HOH 14 2014 2014 HOH HOH A . E 5 HOH 15 2015 2015 HOH HOH A . E 5 HOH 16 2016 2016 HOH HOH A . E 5 HOH 17 2017 2017 HOH HOH A . E 5 HOH 18 2018 2018 HOH HOH A . E 5 HOH 19 2019 2019 HOH HOH A . E 5 HOH 20 2020 2020 HOH HOH A . E 5 HOH 21 2021 2021 HOH HOH A . E 5 HOH 22 2022 2022 HOH HOH A . E 5 HOH 23 2023 2023 HOH HOH A . E 5 HOH 24 2024 2024 HOH HOH A . E 5 HOH 25 2025 2025 HOH HOH A . E 5 HOH 26 2026 2026 HOH HOH A . E 5 HOH 27 2027 2027 HOH HOH A . E 5 HOH 28 2028 2028 HOH HOH A . E 5 HOH 29 2029 2029 HOH HOH A . E 5 HOH 30 2030 2030 HOH HOH A . E 5 HOH 31 2031 2031 HOH HOH A . E 5 HOH 32 2032 2032 HOH HOH A . E 5 HOH 33 2033 2033 HOH HOH A . E 5 HOH 34 2034 2034 HOH HOH A . E 5 HOH 35 2035 2035 HOH HOH A . E 5 HOH 36 2036 2036 HOH HOH A . E 5 HOH 37 2037 2037 HOH HOH A . E 5 HOH 38 2038 2038 HOH HOH A . E 5 HOH 39 2039 2039 HOH HOH A . E 5 HOH 40 2040 2040 HOH HOH A . E 5 HOH 41 2041 2041 HOH HOH A . E 5 HOH 42 2042 2042 HOH HOH A . E 5 HOH 43 2043 2043 HOH HOH A . E 5 HOH 44 2044 2044 HOH HOH A . E 5 HOH 45 2045 2045 HOH HOH A . E 5 HOH 46 2046 2046 HOH HOH A . E 5 HOH 47 2047 2047 HOH HOH A . E 5 HOH 48 2048 2048 HOH HOH A . E 5 HOH 49 2049 2049 HOH HOH A . E 5 HOH 50 2050 2050 HOH HOH A . E 5 HOH 51 2051 2051 HOH HOH A . E 5 HOH 52 2052 2052 HOH HOH A . E 5 HOH 53 2053 2053 HOH HOH A . E 5 HOH 54 2054 2054 HOH HOH A . E 5 HOH 55 2055 2055 HOH HOH A . E 5 HOH 56 2056 2056 HOH HOH A . E 5 HOH 57 2057 2057 HOH HOH A . E 5 HOH 58 2058 2058 HOH HOH A . E 5 HOH 59 2059 2059 HOH HOH A . E 5 HOH 60 2060 2060 HOH HOH A . E 5 HOH 61 2061 2061 HOH HOH A . E 5 HOH 62 2062 2062 HOH HOH A . E 5 HOH 63 2063 2063 HOH HOH A . E 5 HOH 64 2064 2064 HOH HOH A . E 5 HOH 65 2065 2065 HOH HOH A . E 5 HOH 66 2066 2066 HOH HOH A . E 5 HOH 67 2067 2067 HOH HOH A . E 5 HOH 68 2068 2068 HOH HOH A . E 5 HOH 69 2069 2069 HOH HOH A . E 5 HOH 70 2070 2070 HOH HOH A . E 5 HOH 71 2071 2071 HOH HOH A . E 5 HOH 72 2072 2072 HOH HOH A . E 5 HOH 73 2073 2073 HOH HOH A . E 5 HOH 74 2074 2074 HOH HOH A . E 5 HOH 75 2075 2075 HOH HOH A . E 5 HOH 76 2076 2076 HOH HOH A . E 5 HOH 77 2077 2077 HOH HOH A . E 5 HOH 78 2078 2078 HOH HOH A . E 5 HOH 79 2079 2079 HOH HOH A . E 5 HOH 80 2080 2080 HOH HOH A . E 5 HOH 81 2081 2081 HOH HOH A . E 5 HOH 82 2082 2082 HOH HOH A . E 5 HOH 83 2083 2083 HOH HOH A . E 5 HOH 84 2084 2084 HOH HOH A . E 5 HOH 85 2085 2085 HOH HOH A . E 5 HOH 86 2086 2086 HOH HOH A . E 5 HOH 87 2087 2087 HOH HOH A . E 5 HOH 88 2088 2088 HOH HOH A . E 5 HOH 89 2089 2089 HOH HOH A . E 5 HOH 90 2090 2090 HOH HOH A . E 5 HOH 91 2091 2091 HOH HOH A . E 5 HOH 92 2092 2092 HOH HOH A . E 5 HOH 93 2093 2093 HOH HOH A . E 5 HOH 94 2094 2094 HOH HOH A . E 5 HOH 95 2095 2095 HOH HOH A . E 5 HOH 96 2096 2096 HOH HOH A . E 5 HOH 97 2097 2097 HOH HOH A . E 5 HOH 98 2098 2098 HOH HOH A . E 5 HOH 99 2099 2099 HOH HOH A . E 5 HOH 100 2100 2100 HOH HOH A . E 5 HOH 101 2101 2101 HOH HOH A . E 5 HOH 102 2102 2102 HOH HOH A . E 5 HOH 103 2103 2103 HOH HOH A . E 5 HOH 104 2104 2104 HOH HOH A . E 5 HOH 105 2105 2105 HOH HOH A . E 5 HOH 106 2106 2106 HOH HOH A . E 5 HOH 107 2107 2107 HOH HOH A . E 5 HOH 108 2108 2108 HOH HOH A . E 5 HOH 109 2109 2109 HOH HOH A . E 5 HOH 110 2110 2110 HOH HOH A . E 5 HOH 111 2111 2111 HOH HOH A . E 5 HOH 112 2112 2112 HOH HOH A . E 5 HOH 113 2113 2113 HOH HOH A . E 5 HOH 114 2114 2114 HOH HOH A . E 5 HOH 115 2115 2115 HOH HOH A . E 5 HOH 116 2116 2116 HOH HOH A . E 5 HOH 117 2117 2117 HOH HOH A . E 5 HOH 118 2118 2118 HOH HOH A . E 5 HOH 119 2119 2119 HOH HOH A . E 5 HOH 120 2120 2120 HOH HOH A . E 5 HOH 121 2121 2121 HOH HOH A . E 5 HOH 122 2122 2122 HOH HOH A . E 5 HOH 123 2123 2123 HOH HOH A . E 5 HOH 124 2124 2124 HOH HOH A . E 5 HOH 125 2125 2125 HOH HOH A . E 5 HOH 126 2126 2126 HOH HOH A . E 5 HOH 127 2127 2127 HOH HOH A . E 5 HOH 128 2128 2128 HOH HOH A . E 5 HOH 129 2129 2129 HOH HOH A . E 5 HOH 130 2130 2130 HOH HOH A . E 5 HOH 131 2131 2131 HOH HOH A . F 5 HOH 1 2001 2001 HOH HOH B . F 5 HOH 2 2002 2002 HOH HOH B . F 5 HOH 3 2003 2003 HOH HOH B . F 5 HOH 4 2004 2004 HOH HOH B . F 5 HOH 5 2005 2005 HOH HOH B . F 5 HOH 6 2006 2006 HOH HOH B . F 5 HOH 7 2007 2007 HOH HOH B . F 5 HOH 8 2008 2008 HOH HOH B . F 5 HOH 9 2009 2009 HOH HOH B . F 5 HOH 10 2010 2010 HOH HOH B . F 5 HOH 11 2011 2011 HOH HOH B . F 5 HOH 12 2012 2012 HOH HOH B . F 5 HOH 13 2013 2013 HOH HOH B . F 5 HOH 14 2014 2014 HOH HOH B . F 5 HOH 15 2015 2015 HOH HOH B . F 5 HOH 16 2016 2016 HOH HOH B . F 5 HOH 17 2017 2017 HOH HOH B . F 5 HOH 18 2018 2018 HOH HOH B . F 5 HOH 19 2019 2019 HOH HOH B . F 5 HOH 20 2020 2020 HOH HOH B . F 5 HOH 21 2021 2021 HOH HOH B . F 5 HOH 22 2022 2022 HOH HOH B . F 5 HOH 23 2023 2023 HOH HOH B . F 5 HOH 24 2024 2024 HOH HOH B . F 5 HOH 25 2025 2025 HOH HOH B . F 5 HOH 26 2026 2026 HOH HOH B . F 5 HOH 27 2027 2027 HOH HOH B . F 5 HOH 28 2028 2028 HOH HOH B . F 5 HOH 29 2029 2029 HOH HOH B . F 5 HOH 30 2030 2030 HOH HOH B . F 5 HOH 31 2031 2031 HOH HOH B . F 5 HOH 32 2032 2032 HOH HOH B . F 5 HOH 33 2033 2033 HOH HOH B . F 5 HOH 34 2034 2034 HOH HOH B . F 5 HOH 35 2035 2035 HOH HOH B . F 5 HOH 36 2036 2036 HOH HOH B . F 5 HOH 37 2037 2037 HOH HOH B . F 5 HOH 38 2038 2038 HOH HOH B . F 5 HOH 39 2039 2039 HOH HOH B . F 5 HOH 40 2040 2040 HOH HOH B . F 5 HOH 41 2041 2041 HOH HOH B . F 5 HOH 42 2042 2042 HOH HOH B . F 5 HOH 43 2043 2043 HOH HOH B . F 5 HOH 44 2044 2044 HOH HOH B . F 5 HOH 45 2045 2045 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1440 ? 1 MORE -6.4 ? 1 'SSA (A^2)' 15340 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O1G ? C GNP . ? A GNP 1174 ? 1_555 MG ? D MG . ? A MG 1175 ? 1_555 O2B ? C GNP . ? A GNP 1174 ? 1_555 93.1 ? 2 O1G ? C GNP . ? A GNP 1174 ? 1_555 MG ? D MG . ? A MG 1175 ? 1_555 O ? E HOH . ? A HOH 2022 ? 1_555 93.0 ? 3 O2B ? C GNP . ? A GNP 1174 ? 1_555 MG ? D MG . ? A MG 1175 ? 1_555 O ? E HOH . ? A HOH 2022 ? 1_555 95.3 ? 4 O1G ? C GNP . ? A GNP 1174 ? 1_555 MG ? D MG . ? A MG 1175 ? 1_555 OG1 ? A THR 43 ? A THR 43 ? 1_555 94.5 ? 5 O2B ? C GNP . ? A GNP 1174 ? 1_555 MG ? D MG . ? A MG 1175 ? 1_555 OG1 ? A THR 43 ? A THR 43 ? 1_555 170.5 ? 6 O ? E HOH . ? A HOH 2022 ? 1_555 MG ? D MG . ? A MG 1175 ? 1_555 OG1 ? A THR 43 ? A THR 43 ? 1_555 89.9 ? 7 O1G ? C GNP . ? A GNP 1174 ? 1_555 MG ? D MG . ? A MG 1175 ? 1_555 O ? E HOH . ? A HOH 2024 ? 1_555 88.3 ? 8 O2B ? C GNP . ? A GNP 1174 ? 1_555 MG ? D MG . ? A MG 1175 ? 1_555 O ? E HOH . ? A HOH 2024 ? 1_555 85.1 ? 9 O ? E HOH . ? A HOH 2022 ? 1_555 MG ? D MG . ? A MG 1175 ? 1_555 O ? E HOH . ? A HOH 2024 ? 1_555 178.7 ? 10 OG1 ? A THR 43 ? A THR 43 ? 1_555 MG ? D MG . ? A MG 1175 ? 1_555 O ? E HOH . ? A HOH 2024 ? 1_555 89.6 ? 11 O1G ? C GNP . ? A GNP 1174 ? 1_555 MG ? D MG . ? A MG 1175 ? 1_555 OG ? A SER 25 ? A SER 25 ? 1_555 173.7 ? 12 O2B ? C GNP . ? A GNP 1174 ? 1_555 MG ? D MG . ? A MG 1175 ? 1_555 OG ? A SER 25 ? A SER 25 ? 1_555 92.1 ? 13 O ? E HOH . ? A HOH 2022 ? 1_555 MG ? D MG . ? A MG 1175 ? 1_555 OG ? A SER 25 ? A SER 25 ? 1_555 90.1 ? 14 OG1 ? A THR 43 ? A THR 43 ? 1_555 MG ? D MG . ? A MG 1175 ? 1_555 OG ? A SER 25 ? A SER 25 ? 1_555 79.9 ? 15 O ? E HOH . ? A HOH 2024 ? 1_555 MG ? D MG . ? A MG 1175 ? 1_555 OG ? A SER 25 ? A SER 25 ? 1_555 88.6 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-09-18 2 'Structure model' 1 1 2013-10-02 3 'Structure model' 1 2 2013-10-30 4 'Structure model' 1 3 2015-09-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Atomic model' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Database references' 4 4 'Structure model' 'Source and taxonomy' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 26.9827 _pdbx_refine_tls.origin_y 8.3308 _pdbx_refine_tls.origin_z 21.7740 _pdbx_refine_tls.T[1][1] 0.1469 _pdbx_refine_tls.T[2][2] 0.1011 _pdbx_refine_tls.T[3][3] 0.1204 _pdbx_refine_tls.T[1][2] 0.0375 _pdbx_refine_tls.T[1][3] 0.0252 _pdbx_refine_tls.T[2][3] 0.0069 _pdbx_refine_tls.L[1][1] 1.1525 _pdbx_refine_tls.L[2][2] 1.5268 _pdbx_refine_tls.L[3][3] 1.2611 _pdbx_refine_tls.L[1][2] -0.2754 _pdbx_refine_tls.L[1][3] 0.0406 _pdbx_refine_tls.L[2][3] -0.4586 _pdbx_refine_tls.S[1][1] 0.1060 _pdbx_refine_tls.S[1][2] 0.0722 _pdbx_refine_tls.S[1][3] 0.2040 _pdbx_refine_tls.S[2][1] -0.2291 _pdbx_refine_tls.S[2][2] 0.0098 _pdbx_refine_tls.S[2][3] -0.0040 _pdbx_refine_tls.S[3][1] -0.0550 _pdbx_refine_tls.S[3][2] -0.0813 _pdbx_refine_tls.S[3][3] 0.2179 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id ? _pdbx_refine_tls_group.beg_auth_seq_id ? _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id ? _pdbx_refine_tls_group.end_auth_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details ALL # _software.name PHENIX _software.classification refinement _software.version '(PHENIX.REFINE)' _software.citation_id ? _software.pdbx_ordinal 1 # _pdbx_entry_details.entry_id 4C4P _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;N-TERMINALLY AND C-TERMINALLY TRUNCATED RAB11A, WITH A FEW NON-NATIVE RESIDUES AT N-TERMINUS FROM CLONING SITE. FIP2 CONSISTS OF C-TERMINAL RAB-BINDING DOMAIN. ; # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 HH11 A ARG 72 ? ? O A HOH 2072 ? ? 1.30 2 1 O A HOH 2081 ? ? O B HOH 2035 ? ? 1.89 3 1 O A HOH 2005 ? ? O A HOH 2016 ? ? 1.90 4 1 O A HOH 2004 ? ? O B HOH 2035 ? ? 1.95 5 1 O B HOH 2004 ? ? O B HOH 2016 ? ? 2.01 6 1 NH1 A ARG 72 ? ? O A HOH 2072 ? ? 2.08 7 1 O B SER 503 ? ? O B HOH 2045 ? ? 2.19 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CB _pdbx_validate_rmsd_angle.auth_asym_id_1 B _pdbx_validate_rmsd_angle.auth_comp_id_1 LEU _pdbx_validate_rmsd_angle.auth_seq_id_1 467 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CG _pdbx_validate_rmsd_angle.auth_asym_id_2 B _pdbx_validate_rmsd_angle.auth_comp_id_2 LEU _pdbx_validate_rmsd_angle.auth_seq_id_2 467 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CD2 _pdbx_validate_rmsd_angle.auth_asym_id_3 B _pdbx_validate_rmsd_angle.auth_comp_id_3 LEU _pdbx_validate_rmsd_angle.auth_seq_id_3 467 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 99.16 _pdbx_validate_rmsd_angle.angle_target_value 111.00 _pdbx_validate_rmsd_angle.angle_deviation -11.84 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.70 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 125 ? ? 70.57 40.45 2 1 SER A 158 ? ? 84.32 -6.51 # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? A HOH 2054 ? 6.32 . 2 1 O ? A HOH 2055 ? 6.68 . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 A TYR 173 ? CB ? A TYR 173 CB 2 1 Y 0 A TYR 173 ? CG ? A TYR 173 CG 3 1 Y 0 A TYR 173 ? CD1 ? A TYR 173 CD1 4 1 Y 0 A TYR 173 ? CD2 ? A TYR 173 CD2 5 1 Y 0 A TYR 173 ? CE1 ? A TYR 173 CE1 6 1 Y 0 A TYR 173 ? CE2 ? A TYR 173 CE2 7 1 Y 0 A TYR 173 ? CZ ? A TYR 173 CZ 8 1 Y 0 A TYR 173 ? OH ? A TYR 173 OH 9 1 Y 1 B TYR 448 ? CG ? B TYR 43 CG 10 1 Y 1 B TYR 448 ? CD1 ? B TYR 43 CD1 11 1 Y 1 B TYR 448 ? CD2 ? B TYR 43 CD2 12 1 Y 1 B TYR 448 ? CE1 ? B TYR 43 CE1 13 1 Y 1 B TYR 448 ? CE2 ? B TYR 43 CE2 14 1 Y 1 B TYR 448 ? CZ ? B TYR 43 CZ 15 1 Y 1 B TYR 448 ? OH ? B TYR 43 OH # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A GLY 2 ? A GLY 2 3 1 Y 1 A THR 3 ? A THR 3 4 1 Y 1 A ARG 4 ? A ARG 4 5 1 Y 1 A ASP 5 ? A ASP 5 6 1 Y 1 A ASP 6 ? A ASP 6 7 1 Y 1 B GLY 406 ? B GLY 1 8 1 Y 1 B ALA 407 ? B ALA 2 9 1 Y 1 B MET 408 ? B MET 3 10 1 Y 1 B ALA 409 ? B ALA 4 11 1 Y 1 B ALA 410 ? B ALA 5 12 1 Y 1 B LYS 411 ? B LYS 6 13 1 Y 1 B PHE 412 ? B PHE 7 14 1 Y 1 B ARG 413 ? B ARG 8 15 1 Y 1 B ALA 414 ? B ALA 9 16 1 Y 1 B SER 415 ? B SER 10 17 1 Y 1 B ASN 416 ? B ASN 11 18 1 Y 1 B ILE 417 ? B ILE 12 19 1 Y 1 B MET 418 ? B MET 13 20 1 Y 1 B PRO 419 ? B PRO 14 21 1 Y 1 B SER 420 ? B SER 15 22 1 Y 1 B SER 421 ? B SER 16 23 1 Y 1 B SER 422 ? B SER 17 24 1 Y 1 B PHE 423 ? B PHE 18 25 1 Y 1 B HIS 424 ? B HIS 19 26 1 Y 1 B MET 425 ? B MET 20 27 1 Y 1 B SER 426 ? B SER 21 28 1 Y 1 B PRO 427 ? B PRO 22 29 1 Y 1 B THR 428 ? B THR 23 30 1 Y 1 B SER 429 ? B SER 24 31 1 Y 1 B ASN 430 ? B ASN 25 32 1 Y 1 B GLU 431 ? B GLU 26 33 1 Y 1 B ASP 432 ? B ASP 27 34 1 Y 1 B LEU 433 ? B LEU 28 35 1 Y 1 B ARG 434 ? B ARG 29 36 1 Y 1 B LYS 435 ? B LYS 30 37 1 Y 1 B ILE 436 ? B ILE 31 38 1 Y 1 B PRO 437 ? B PRO 32 39 1 Y 1 B ASP 438 ? B ASP 33 40 1 Y 1 B SER 439 ? B SER 34 41 1 Y 1 B ASN 440 ? B ASN 35 42 1 Y 1 B PRO 441 ? B PRO 36 43 1 Y 1 B PHE 442 ? B PHE 37 44 1 Y 1 B ASP 443 ? B ASP 38 45 1 Y 1 B ALA 444 ? B ALA 39 46 1 Y 1 B THR 445 ? B THR 40 47 1 Y 1 B ALA 446 ? B ALA 41 48 1 Y 1 B GLY 447 ? B GLY 42 49 1 Y 1 B ARG 504 ? B ARG 99 50 1 Y 1 B LYS 505 ? B LYS 100 51 1 Y 1 B ALA 506 ? B ALA 101 52 1 Y 1 B GLY 507 ? B GLY 102 53 1 Y 1 B LYS 508 ? B LYS 103 54 1 Y 1 B PHE 509 ? B PHE 104 55 1 Y 1 B SER 510 ? B SER 105 56 1 Y 1 B ASN 511 ? B ASN 106 57 1 Y 1 B SER 512 ? B SER 107 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER' GNP 4 'MAGNESIUM ION' MG 5 water HOH #