data_4CIO # _entry.id 4CIO # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4CIO PDBE EBI-59211 WWPDB D_1290059211 BMRB 18846 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 4CH0 unspecified 'RRM DOMAIN FROM C. ELEGANS SUP-12' PDB 4CH1 unspecified 'RRM DOMAIN FROM C. ELEGANS SUP-12' BMRB 18846 unspecified . # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4CIO _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2013-12-12 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Amrane, S.' 1 'Mackereth, C.D.' 2 # _citation.id primary _citation.title 'Backbone-Independent Nucleic Acid Binding by Splicing Factor Sup-12 Reveals Key Aspects of Molecular Recognition' _citation.journal_abbrev Nat.Commun. _citation.journal_volume 5 _citation.page_first 4595 _citation.page_last ? _citation.year 2014 _citation.journal_id_ASTM ? _citation.country UK _citation.journal_id_ISSN 2041-1723 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 25183497 _citation.pdbx_database_id_DOI 10.1038/NCOMMS5595 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Amrane, S.' 1 primary 'Rebora, K.' 2 primary 'Zniber, I.' 3 primary 'Dupuy, D.' 4 primary 'Mackereth, C.D.' 5 # _cell.entry_id 4CIO _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4CIO _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'PROTEIN SUP-12, ISOFORM A' 10831.196 1 ? ? 'RRM DOMAIN, RESIDUES 28-121' ? 2 polymer syn "5'-R(*GP*GP*UP*GP*UP*GP*CP)-3'" 2253.379 1 ? ? 'SUP-12 BINDING MOTIF' 'THE HEPTAMER SEQUENCE IS DERIVED FROM THE INTRON BETWEEN EXONS 4 AND 5B FROM THE C. ELEGANS EGL-15 GENE.' # _entity_name_com.entity_id 1 _entity_name_com.name SUP-12 # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GAMGSRDTMFTKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKDPNPIIDGRK ANVNLAYLGAKPRTNVQ ; ;GAMGSRDTMFTKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKDPNPIIDGRK ANVNLAYLGAKPRTNVQ ; A ? 2 polyribonucleotide no no GGUGUGC GGUGUGC B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ALA n 1 3 MET n 1 4 GLY n 1 5 SER n 1 6 ARG n 1 7 ASP n 1 8 THR n 1 9 MET n 1 10 PHE n 1 11 THR n 1 12 LYS n 1 13 ILE n 1 14 PHE n 1 15 VAL n 1 16 GLY n 1 17 GLY n 1 18 LEU n 1 19 PRO n 1 20 TYR n 1 21 HIS n 1 22 THR n 1 23 SER n 1 24 ASP n 1 25 LYS n 1 26 THR n 1 27 LEU n 1 28 HIS n 1 29 GLU n 1 30 TYR n 1 31 PHE n 1 32 GLU n 1 33 GLN n 1 34 PHE n 1 35 GLY n 1 36 ASP n 1 37 ILE n 1 38 GLU n 1 39 GLU n 1 40 ALA n 1 41 VAL n 1 42 VAL n 1 43 ILE n 1 44 THR n 1 45 ASP n 1 46 ARG n 1 47 ASN n 1 48 THR n 1 49 GLN n 1 50 LYS n 1 51 SER n 1 52 ARG n 1 53 GLY n 1 54 TYR n 1 55 GLY n 1 56 PHE n 1 57 VAL n 1 58 THR n 1 59 MET n 1 60 LYS n 1 61 ASP n 1 62 ARG n 1 63 ALA n 1 64 SER n 1 65 ALA n 1 66 GLU n 1 67 ARG n 1 68 ALA n 1 69 CYS n 1 70 LYS n 1 71 ASP n 1 72 PRO n 1 73 ASN n 1 74 PRO n 1 75 ILE n 1 76 ILE n 1 77 ASP n 1 78 GLY n 1 79 ARG n 1 80 LYS n 1 81 ALA n 1 82 ASN n 1 83 VAL n 1 84 ASN n 1 85 LEU n 1 86 ALA n 1 87 TYR n 1 88 LEU n 1 89 GLY n 1 90 ALA n 1 91 LYS n 1 92 PRO n 1 93 ARG n 1 94 THR n 1 95 ASN n 1 96 VAL n 1 97 GLN n 2 1 G n 2 2 G n 2 3 U n 2 4 G n 2 5 U n 2 6 G n 2 7 C n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'CAENORHABDITIS ELEGANS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 6239 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant PLYSY _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET-HIS1A _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'CAENORHABDITIS ELEGANS' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 6239 _pdbx_entity_src_syn.details ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP O45189_CAEEL 1 ? ? O45189 ? 2 PDB 4CIO 2 ? ? 4CIO ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4CIO A 4 ? 97 ? O45189 28 ? 121 ? 28 121 2 2 4CIO B 1 ? 7 ? 4CIO 1 ? 7 ? 1 7 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4CIO GLY A 1 ? UNP O45189 ? ? 'expression tag' 25 1 1 4CIO ALA A 2 ? UNP O45189 ? ? 'expression tag' 26 2 1 4CIO MET A 3 ? UNP O45189 ? ? 'expression tag' 27 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 15C-NOESY 1 2 1 'DOUBLE-FILTERED 1H' 1 3 1 1H-TOCSY 1 4 1 'DOUBLE- FILTERED 1H' 1 5 1 1H-NOESY 1 6 1 'HALF- FILTERED 1H' 1 7 1 1H-NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298.0 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1.0 _pdbx_nmr_exptl_sample_conditions.pH 6.5 _pdbx_nmr_exptl_sample_conditions.ionic_strength 300 _pdbx_nmr_exptl_sample_conditions.ionic_strength_units mM _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '100% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model Avance _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 800 # _pdbx_nmr_refine.entry_id 4CIO _pdbx_nmr_refine.method ARIA1.2 _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_details.entry_id 4CIO _pdbx_nmr_details.text ;THE STRUCTURE WAS DETERMINED BY USING MULTI- DIMENSIONAL NMR SPECTRSOCOPY WITH 15N-, 13C,15N-, OR 2H- LABELED SUP-12 IN COMPLEX WITH A NATURAL ABUNDANCE GGUGUGC RNA LIGAND. THE CHEMICAL SHIFTS HAVE BEEN DEPOSITED PREVIOUSLY IN THE BMRB AS ENTRY 18846. ; # _pdbx_nmr_ensemble.entry_id 4CIO _pdbx_nmr_ensemble.conformers_calculated_total_number 125 _pdbx_nmr_ensemble.conformers_submitted_total_number 15 _pdbx_nmr_ensemble.conformer_selection_criteria 'LOWEST ENERGY' # _pdbx_nmr_representative.entry_id 4CIO _pdbx_nmr_representative.conformer_id 8 _pdbx_nmr_representative.selection_criteria ? # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal refinement CNS1.1 ? 'BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU,READ, RICE,SIMONSON,WARREN' 1 'structure solution' NMRPIPE ? ? 2 'structure solution' SPARKY ? ? 3 # _exptl.entry_id 4CIO _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 4CIO _struct.title 'RRM domain from C. elegans SUP-12 bound to GGUGUGC RNA' _struct.pdbx_descriptor 'PROTEIN SUP-12, ISOFORM A' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4CIO _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN/RNA' _struct_keywords.text 'RNA BINDING PROTEIN-RNA COMPLEX, MUSCLE, DEVELOPMENT' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 23 ? GLU A 32 ? SER A 47 GLU A 56 1 ? 10 HELX_P HELX_P2 2 ASP A 61 ? ASP A 71 ? ASP A 85 ASP A 95 1 ? 11 HELX_P HELX_P3 3 TYR A 87 ? GLY A 89 ? TYR A 111 GLY A 113 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 4 ? AB ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AA 3 4 ? anti-parallel AB 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 ILE A 37 ? THR A 44 ? ILE A 61 THR A 68 AA 2 SER A 51 ? MET A 59 ? SER A 75 MET A 83 AA 3 LYS A 12 ? GLY A 16 ? LYS A 36 GLY A 40 AA 4 ASN A 82 ? LEU A 85 ? ASN A 106 LEU A 109 AB 1 ILE A 75 ? ILE A 76 ? ILE A 99 ILE A 100 AB 2 ARG A 79 ? LYS A 80 ? ARG A 103 LYS A 104 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 O ILE A 43 ? O ILE A 67 N GLY A 53 ? N GLY A 77 AA 2 3 N VAL A 57 ? N VAL A 81 O ILE A 13 ? O ILE A 37 AA 3 4 N GLY A 16 ? N GLY A 40 O ASN A 82 ? O ASN A 106 AB 1 2 N ILE A 76 ? N ILE A 100 O ARG A 79 ? O ARG A 103 # _database_PDB_matrix.entry_id 4CIO _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4CIO _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 25 25 GLY GLY A . n A 1 2 ALA 2 26 26 ALA ALA A . n A 1 3 MET 3 27 27 MET MET A . n A 1 4 GLY 4 28 28 GLY GLY A . n A 1 5 SER 5 29 29 SER SER A . n A 1 6 ARG 6 30 30 ARG ARG A . n A 1 7 ASP 7 31 31 ASP ASP A . n A 1 8 THR 8 32 32 THR THR A . n A 1 9 MET 9 33 33 MET MET A . n A 1 10 PHE 10 34 34 PHE PHE A . n A 1 11 THR 11 35 35 THR THR A . n A 1 12 LYS 12 36 36 LYS LYS A . n A 1 13 ILE 13 37 37 ILE ILE A . n A 1 14 PHE 14 38 38 PHE PHE A . n A 1 15 VAL 15 39 39 VAL VAL A . n A 1 16 GLY 16 40 40 GLY GLY A . n A 1 17 GLY 17 41 41 GLY GLY A . n A 1 18 LEU 18 42 42 LEU LEU A . n A 1 19 PRO 19 43 43 PRO PRO A . n A 1 20 TYR 20 44 44 TYR TYR A . n A 1 21 HIS 21 45 45 HIS HIS A . n A 1 22 THR 22 46 46 THR THR A . n A 1 23 SER 23 47 47 SER SER A . n A 1 24 ASP 24 48 48 ASP ASP A . n A 1 25 LYS 25 49 49 LYS LYS A . n A 1 26 THR 26 50 50 THR THR A . n A 1 27 LEU 27 51 51 LEU LEU A . n A 1 28 HIS 28 52 52 HIS HIS A . n A 1 29 GLU 29 53 53 GLU GLU A . n A 1 30 TYR 30 54 54 TYR TYR A . n A 1 31 PHE 31 55 55 PHE PHE A . n A 1 32 GLU 32 56 56 GLU GLU A . n A 1 33 GLN 33 57 57 GLN GLN A . n A 1 34 PHE 34 58 58 PHE PHE A . n A 1 35 GLY 35 59 59 GLY GLY A . n A 1 36 ASP 36 60 60 ASP ASP A . n A 1 37 ILE 37 61 61 ILE ILE A . n A 1 38 GLU 38 62 62 GLU GLU A . n A 1 39 GLU 39 63 63 GLU GLU A . n A 1 40 ALA 40 64 64 ALA ALA A . n A 1 41 VAL 41 65 65 VAL VAL A . n A 1 42 VAL 42 66 66 VAL VAL A . n A 1 43 ILE 43 67 67 ILE ILE A . n A 1 44 THR 44 68 68 THR THR A . n A 1 45 ASP 45 69 69 ASP ASP A . n A 1 46 ARG 46 70 70 ARG ARG A . n A 1 47 ASN 47 71 71 ASN ASN A . n A 1 48 THR 48 72 72 THR THR A . n A 1 49 GLN 49 73 73 GLN GLN A . n A 1 50 LYS 50 74 74 LYS LYS A . n A 1 51 SER 51 75 75 SER SER A . n A 1 52 ARG 52 76 76 ARG ARG A . n A 1 53 GLY 53 77 77 GLY GLY A . n A 1 54 TYR 54 78 78 TYR TYR A . n A 1 55 GLY 55 79 79 GLY GLY A . n A 1 56 PHE 56 80 80 PHE PHE A . n A 1 57 VAL 57 81 81 VAL VAL A . n A 1 58 THR 58 82 82 THR THR A . n A 1 59 MET 59 83 83 MET MET A . n A 1 60 LYS 60 84 84 LYS LYS A . n A 1 61 ASP 61 85 85 ASP ASP A . n A 1 62 ARG 62 86 86 ARG ARG A . n A 1 63 ALA 63 87 87 ALA ALA A . n A 1 64 SER 64 88 88 SER SER A . n A 1 65 ALA 65 89 89 ALA ALA A . n A 1 66 GLU 66 90 90 GLU GLU A . n A 1 67 ARG 67 91 91 ARG ARG A . n A 1 68 ALA 68 92 92 ALA ALA A . n A 1 69 CYS 69 93 93 CYS CYS A . n A 1 70 LYS 70 94 94 LYS LYS A . n A 1 71 ASP 71 95 95 ASP ASP A . n A 1 72 PRO 72 96 96 PRO PRO A . n A 1 73 ASN 73 97 97 ASN ASN A . n A 1 74 PRO 74 98 98 PRO PRO A . n A 1 75 ILE 75 99 99 ILE ILE A . n A 1 76 ILE 76 100 100 ILE ILE A . n A 1 77 ASP 77 101 101 ASP ASP A . n A 1 78 GLY 78 102 102 GLY GLY A . n A 1 79 ARG 79 103 103 ARG ARG A . n A 1 80 LYS 80 104 104 LYS LYS A . n A 1 81 ALA 81 105 105 ALA ALA A . n A 1 82 ASN 82 106 106 ASN ASN A . n A 1 83 VAL 83 107 107 VAL VAL A . n A 1 84 ASN 84 108 108 ASN ASN A . n A 1 85 LEU 85 109 109 LEU LEU A . n A 1 86 ALA 86 110 110 ALA ALA A . n A 1 87 TYR 87 111 111 TYR TYR A . n A 1 88 LEU 88 112 112 LEU LEU A . n A 1 89 GLY 89 113 113 GLY GLY A . n A 1 90 ALA 90 114 114 ALA ALA A . n A 1 91 LYS 91 115 115 LYS LYS A . n A 1 92 PRO 92 116 116 PRO PRO A . n A 1 93 ARG 93 117 117 ARG ARG A . n A 1 94 THR 94 118 118 THR THR A . n A 1 95 ASN 95 119 119 ASN ASN A . n A 1 96 VAL 96 120 120 VAL VAL A . n A 1 97 GLN 97 121 121 GLN GLN A . n B 2 1 G 1 1 1 G G B . n B 2 2 G 2 2 2 G G B . n B 2 3 U 3 3 3 U U B . n B 2 4 G 4 4 4 G G B . n B 2 5 U 5 5 5 U U B . n B 2 6 G 6 6 6 G G B . n B 2 7 C 7 7 7 C C B . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-09-03 2 'Structure model' 1 1 2014-09-17 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # _pdbx_entry_details.entry_id 4CIO _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE SAMPLE CONTAINS AN ADDITIONAL GLY-ALA-MET- AT THE N- TERMINUS FOLLOWING CLEAVAGE BY TEV PROTEASE ; # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 3 OD1 A ASP 31 ? ? HH21 A ARG 86 ? ? 1.58 2 7 H A ASP 69 ? ? HA A GLN 73 ? ? 1.12 3 7 OE1 A GLU 90 ? ? HZ2 A LYS 94 ? ? 1.56 4 7 O A ASP 31 ? ? HG1 A THR 32 ? ? 1.59 5 9 HA3 A GLY 40 ? ? HD1 A TYR 78 ? ? 1.26 6 9 HG2 A PRO 43 ? ? HB3 A ASP 101 ? ? 1.29 7 9 HA A ILE 99 ? ? HA A LYS 104 ? ? 1.30 8 10 HH A TYR 44 ? ? "HO2'" B G 1 ? ? 1.22 9 10 HG23 A VAL 65 ? ? H21 B G 6 ? ? 1.32 10 13 HH A TYR 44 ? ? "HO2'" B G 1 ? ? 1.33 11 14 O A GLY 40 ? ? H A ASN 106 ? ? 1.59 12 15 H A SER 29 ? ? HB3 A LYS 36 ? ? 1.11 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 7 CZ A TYR 44 ? ? CE2 A TYR 44 ? ? 1.301 1.381 -0.080 0.013 N 2 8 CZ A TYR 78 ? ? CE2 A TYR 78 ? ? 1.300 1.381 -0.081 0.013 N 3 10 CZ A TYR 78 ? ? CE2 A TYR 78 ? ? 1.301 1.381 -0.080 0.013 N 4 12 CE1 A TYR 111 ? ? CZ A TYR 111 ? ? 1.491 1.381 0.110 0.013 N 5 12 CZ A TYR 111 ? ? CE2 A TYR 111 ? ? 1.261 1.381 -0.120 0.013 N 6 14 CE1 A TYR 78 ? ? CZ A TYR 78 ? ? 1.477 1.381 0.096 0.013 N 7 14 CZ A TYR 78 ? ? CE2 A TYR 78 ? ? 1.277 1.381 -0.104 0.013 N 8 15 CE1 A TYR 78 ? ? CZ A TYR 78 ? ? 1.464 1.381 0.083 0.013 N 9 15 CZ A TYR 78 ? ? CE2 A TYR 78 ? ? 1.292 1.381 -0.089 0.013 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 26 ? ? -118.39 -76.08 2 1 TYR A 44 ? ? -69.09 1.87 3 1 ASN A 71 ? ? -108.09 -61.77 4 1 THR A 118 ? ? 44.90 86.74 5 1 ASN A 119 ? ? 77.70 80.40 6 2 ALA A 26 ? ? -158.25 13.33 7 2 MET A 27 ? ? 58.66 85.03 8 2 LYS A 74 ? ? -102.21 -63.72 9 2 SER A 75 ? ? -160.44 -69.26 10 2 ARG A 76 ? ? 76.63 -25.17 11 2 PRO A 116 ? ? -96.73 32.43 12 2 ARG A 117 ? ? -151.58 -57.53 13 2 VAL A 120 ? ? 59.72 85.91 14 3 GLN A 73 ? ? 57.68 79.81 15 3 SER A 75 ? ? -54.75 102.64 16 3 ASN A 97 ? ? -152.61 68.40 17 3 THR A 118 ? ? 60.49 176.06 18 3 VAL A 120 ? ? 74.99 -40.98 19 4 ASP A 31 ? ? 64.66 80.84 20 4 GLN A 73 ? ? 57.57 81.65 21 4 ASN A 97 ? ? 34.35 64.14 22 4 ARG A 117 ? ? -179.10 -40.47 23 4 VAL A 120 ? ? 71.17 -73.46 24 5 ALA A 26 ? ? 67.35 177.01 25 5 SER A 29 ? ? 179.60 -67.11 26 5 ARG A 30 ? ? -150.31 -41.26 27 5 ASP A 31 ? ? 74.82 153.56 28 5 PHE A 34 ? ? 123.79 -176.12 29 5 THR A 35 ? ? 61.22 -40.79 30 5 ARG A 70 ? ? -49.37 -17.03 31 5 SER A 75 ? ? -175.54 -122.87 32 5 ARG A 76 ? ? 129.54 -50.31 33 5 ASN A 97 ? ? 38.95 63.42 34 6 ARG A 30 ? ? 65.17 84.62 35 6 GLN A 73 ? ? 59.12 14.41 36 6 SER A 75 ? ? -163.24 -108.53 37 6 ARG A 76 ? ? 112.23 -19.06 38 6 VAL A 120 ? ? -91.76 -84.84 39 7 ARG A 30 ? ? 54.42 92.03 40 7 THR A 32 ? ? 57.61 16.37 41 7 GLN A 57 ? ? -57.41 -9.83 42 7 ARG A 70 ? ? -57.89 -4.75 43 7 GLN A 73 ? ? 62.60 -92.16 44 7 LYS A 74 ? ? 55.16 78.26 45 7 SER A 75 ? ? -35.80 107.82 46 7 ASN A 97 ? ? -154.66 39.98 47 7 ASP A 101 ? ? 45.07 30.00 48 7 ARG A 117 ? ? -141.78 19.72 49 7 VAL A 120 ? ? 67.62 107.04 50 8 ALA A 26 ? ? 62.00 -160.16 51 8 SER A 75 ? ? -64.68 96.87 52 8 ASN A 97 ? ? 31.91 62.45 53 9 ARG A 30 ? ? -94.87 -73.52 54 9 ASP A 31 ? ? 68.67 164.17 55 9 PRO A 43 ? ? -49.88 158.85 56 9 GLN A 73 ? ? 57.62 76.39 57 9 ASN A 97 ? ? 89.03 54.66 58 9 ILE A 99 ? ? -25.46 131.39 59 9 ARG A 117 ? ? 173.76 -39.36 60 9 ASN A 119 ? ? -178.37 -57.61 61 9 VAL A 120 ? ? 55.69 87.43 62 10 ALA A 26 ? ? 67.89 -78.04 63 10 SER A 75 ? ? -50.17 104.63 64 10 ASN A 97 ? ? -148.75 53.55 65 10 ILE A 99 ? ? -24.14 124.85 66 10 LEU A 109 ? ? -57.37 96.28 67 10 ARG A 117 ? ? -176.78 -78.75 68 10 THR A 118 ? ? -156.19 23.74 69 11 MET A 33 ? ? -73.90 -71.45 70 11 PHE A 34 ? ? -52.68 -71.62 71 11 THR A 35 ? ? -53.26 18.17 72 11 TYR A 44 ? ? -64.96 0.15 73 11 GLN A 73 ? ? 69.45 -86.00 74 11 LYS A 74 ? ? 63.04 67.31 75 11 LYS A 84 ? ? -51.04 -6.24 76 11 LYS A 94 ? ? -49.57 -9.77 77 11 ASN A 97 ? ? 79.23 69.65 78 11 ASP A 101 ? ? 35.02 17.83 79 11 LYS A 115 ? ? 74.40 92.20 80 11 ARG A 117 ? ? -134.95 -46.60 81 12 MET A 27 ? ? 64.17 87.57 82 12 THR A 35 ? ? -68.78 1.63 83 12 PRO A 43 ? ? -48.21 160.01 84 12 LYS A 74 ? ? -38.56 -76.32 85 12 SER A 75 ? ? -155.99 -65.65 86 12 ARG A 76 ? ? 74.57 -55.30 87 12 ARG A 117 ? ? -157.55 1.97 88 12 VAL A 120 ? ? 69.22 117.32 89 13 THR A 32 ? ? -90.50 53.92 90 13 THR A 35 ? ? 65.37 -0.46 91 13 LYS A 84 ? ? -51.73 -6.14 92 13 ASN A 97 ? ? -15.98 91.13 93 13 THR A 118 ? ? -101.87 50.79 94 13 VAL A 120 ? ? 69.81 103.55 95 14 SER A 29 ? ? 69.01 103.33 96 14 ARG A 30 ? ? 66.55 178.44 97 14 THR A 35 ? ? -149.49 19.45 98 14 GLU A 56 ? ? -53.53 0.17 99 14 ASP A 69 ? ? -44.96 154.92 100 14 ARG A 76 ? ? -48.92 -12.49 101 14 ASN A 97 ? ? 70.18 92.42 102 14 LEU A 109 ? ? -68.86 93.30 103 14 ALA A 110 ? ? -36.42 -19.12 104 14 LYS A 115 ? ? -114.14 75.64 105 15 MET A 27 ? ? -147.46 -130.38 106 15 SER A 29 ? ? 178.72 104.25 107 15 ARG A 30 ? ? 166.19 -154.04 108 15 PHE A 34 ? ? -92.22 42.19 109 15 THR A 35 ? ? -147.89 20.06 110 15 PRO A 43 ? ? -49.08 155.88 111 15 GLU A 56 ? ? -63.28 4.13 112 15 GLN A 73 ? ? 59.12 15.21 113 15 SER A 75 ? ? -59.80 107.82 114 15 ASN A 97 ? ? 5.92 67.74 115 15 ASP A 101 ? ? 36.24 20.65 116 15 VAL A 120 ? ? 62.53 82.25 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 10 _pdbx_validate_peptide_omega.auth_comp_id_1 PRO _pdbx_validate_peptide_omega.auth_asym_id_1 A _pdbx_validate_peptide_omega.auth_seq_id_1 98 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 ILE _pdbx_validate_peptide_omega.auth_asym_id_2 A _pdbx_validate_peptide_omega.auth_seq_id_2 99 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega 149.10 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 2 G B 2 ? ? 0.046 'SIDE CHAIN' 2 4 TYR A 111 ? ? 0.052 'SIDE CHAIN' 3 10 TYR A 54 ? ? 0.054 'SIDE CHAIN' #