data_4CNM # _entry.id 4CNM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4CNM pdb_00004cnm 10.2210/pdb4cnm/pdb PDBE EBI-59414 ? ? WWPDB D_1290059414 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 4CNC _pdbx_database_related.content_type unspecified _pdbx_database_related.details 'CRYSTAL STRUCTURE OF HUMAN 5T4 (WNT-ACTIVATED INHIBITORY FACTOR 1, TROPHOBLAST GLYCOPROTEIN)' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4CNM _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2014-01-23 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Zhao, Y.' 1 'Malinauskas, T.' 2 'Harlos, K.' 3 'Jones, E.Y.' 4 # _citation.id primary _citation.title 'Structural Insights Into the Inhibition of Wnt Signaling by Cancer Antigen 5T4/Wnt-Activated Inhibitory Factor 1.' _citation.journal_abbrev Structure _citation.journal_volume 22 _citation.page_first 612 _citation.page_last ? _citation.year 2014 _citation.journal_id_ASTM STRUE6 _citation.country UK _citation.journal_id_ISSN 0969-2126 _citation.journal_id_CSD 2005 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24582434 _citation.pdbx_database_id_DOI 10.1016/J.STR.2014.01.009 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zhao, Y.' 1 ? primary 'Malinauskas, T.' 2 ? primary 'Harlos, K.' 3 ? primary 'Jones, E.Y.' 4 ? # _cell.entry_id 4CNM _cell.length_a 49.310 _cell.length_b 67.310 _cell.length_c 96.380 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4CNM _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'TROPHOBLAST GLYCOPROTEIN' 32900.395 1 ? ? 'EXTRACELLULAR DOMAIN, RESIDUES 60-345' ? 2 branched man '2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 424.401 1 ? ? ? ? 3 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 4 ? ? ? ? 4 non-polymer syn 'DI(HYDROXYETHYL)ETHER' 106.120 5 ? ? ? ? 5 non-polymer syn 'CITRIC ACID' 192.124 1 ? ? ? ? 6 water nat water 18.015 124 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;5T4 ONCOFETAL ANTIGEN, WNT-ACTIVATED INHIBITORY FACTOR, 5T4 ONCOFETAL TROPHOBLAST GLYCOPROTEIN, 5T4 ONCOTROPHOBLAST GLYCOPROTEIN, M6P1 ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;ETGDQCPALCECSEAARTVKCVNRNLTEVPTDLPAYVRNLFLTGNQLAVLPAGAFARRPPLAELAALNLSGSRLDEVRAG AFEHLPSLRQLDLSHNPLADLSPFAFSGSNASVSAPSPLVELILNHIVPPEDERQNRSFEGMVVAALLAGRALQGLRRLE LASNHFLYLPRDVLAQLPSLRHLDLSNNSLVSLTYVSFRNLTHLESLHLEDNALKVLHNGTLAELQGLPHIRVFLDNNPW VCDCHMADMVTWLKETEVVQGKDRLTCAYPEKMRNRVLLELNSADLDCDGTETSQVAPA ; _entity_poly.pdbx_seq_one_letter_code_can ;ETGDQCPALCECSEAARTVKCVNRNLTEVPTDLPAYVRNLFLTGNQLAVLPAGAFARRPPLAELAALNLSGSRLDEVRAG AFEHLPSLRQLDLSHNPLADLSPFAFSGSNASVSAPSPLVELILNHIVPPEDERQNRSFEGMVVAALLAGRALQGLRRLE LASNHFLYLPRDVLAQLPSLRHLDLSNNSLVSLTYVSFRNLTHLESLHLEDNALKVLHNGTLAELQGLPHIRVFLDNNPW VCDCHMADMVTWLKETEVVQGKDRLTCAYPEKMRNRVLLELNSADLDCDGTETSQVAPA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLU n 1 2 THR n 1 3 GLY n 1 4 ASP n 1 5 GLN n 1 6 CYS n 1 7 PRO n 1 8 ALA n 1 9 LEU n 1 10 CYS n 1 11 GLU n 1 12 CYS n 1 13 SER n 1 14 GLU n 1 15 ALA n 1 16 ALA n 1 17 ARG n 1 18 THR n 1 19 VAL n 1 20 LYS n 1 21 CYS n 1 22 VAL n 1 23 ASN n 1 24 ARG n 1 25 ASN n 1 26 LEU n 1 27 THR n 1 28 GLU n 1 29 VAL n 1 30 PRO n 1 31 THR n 1 32 ASP n 1 33 LEU n 1 34 PRO n 1 35 ALA n 1 36 TYR n 1 37 VAL n 1 38 ARG n 1 39 ASN n 1 40 LEU n 1 41 PHE n 1 42 LEU n 1 43 THR n 1 44 GLY n 1 45 ASN n 1 46 GLN n 1 47 LEU n 1 48 ALA n 1 49 VAL n 1 50 LEU n 1 51 PRO n 1 52 ALA n 1 53 GLY n 1 54 ALA n 1 55 PHE n 1 56 ALA n 1 57 ARG n 1 58 ARG n 1 59 PRO n 1 60 PRO n 1 61 LEU n 1 62 ALA n 1 63 GLU n 1 64 LEU n 1 65 ALA n 1 66 ALA n 1 67 LEU n 1 68 ASN n 1 69 LEU n 1 70 SER n 1 71 GLY n 1 72 SER n 1 73 ARG n 1 74 LEU n 1 75 ASP n 1 76 GLU n 1 77 VAL n 1 78 ARG n 1 79 ALA n 1 80 GLY n 1 81 ALA n 1 82 PHE n 1 83 GLU n 1 84 HIS n 1 85 LEU n 1 86 PRO n 1 87 SER n 1 88 LEU n 1 89 ARG n 1 90 GLN n 1 91 LEU n 1 92 ASP n 1 93 LEU n 1 94 SER n 1 95 HIS n 1 96 ASN n 1 97 PRO n 1 98 LEU n 1 99 ALA n 1 100 ASP n 1 101 LEU n 1 102 SER n 1 103 PRO n 1 104 PHE n 1 105 ALA n 1 106 PHE n 1 107 SER n 1 108 GLY n 1 109 SER n 1 110 ASN n 1 111 ALA n 1 112 SER n 1 113 VAL n 1 114 SER n 1 115 ALA n 1 116 PRO n 1 117 SER n 1 118 PRO n 1 119 LEU n 1 120 VAL n 1 121 GLU n 1 122 LEU n 1 123 ILE n 1 124 LEU n 1 125 ASN n 1 126 HIS n 1 127 ILE n 1 128 VAL n 1 129 PRO n 1 130 PRO n 1 131 GLU n 1 132 ASP n 1 133 GLU n 1 134 ARG n 1 135 GLN n 1 136 ASN n 1 137 ARG n 1 138 SER n 1 139 PHE n 1 140 GLU n 1 141 GLY n 1 142 MET n 1 143 VAL n 1 144 VAL n 1 145 ALA n 1 146 ALA n 1 147 LEU n 1 148 LEU n 1 149 ALA n 1 150 GLY n 1 151 ARG n 1 152 ALA n 1 153 LEU n 1 154 GLN n 1 155 GLY n 1 156 LEU n 1 157 ARG n 1 158 ARG n 1 159 LEU n 1 160 GLU n 1 161 LEU n 1 162 ALA n 1 163 SER n 1 164 ASN n 1 165 HIS n 1 166 PHE n 1 167 LEU n 1 168 TYR n 1 169 LEU n 1 170 PRO n 1 171 ARG n 1 172 ASP n 1 173 VAL n 1 174 LEU n 1 175 ALA n 1 176 GLN n 1 177 LEU n 1 178 PRO n 1 179 SER n 1 180 LEU n 1 181 ARG n 1 182 HIS n 1 183 LEU n 1 184 ASP n 1 185 LEU n 1 186 SER n 1 187 ASN n 1 188 ASN n 1 189 SER n 1 190 LEU n 1 191 VAL n 1 192 SER n 1 193 LEU n 1 194 THR n 1 195 TYR n 1 196 VAL n 1 197 SER n 1 198 PHE n 1 199 ARG n 1 200 ASN n 1 201 LEU n 1 202 THR n 1 203 HIS n 1 204 LEU n 1 205 GLU n 1 206 SER n 1 207 LEU n 1 208 HIS n 1 209 LEU n 1 210 GLU n 1 211 ASP n 1 212 ASN n 1 213 ALA n 1 214 LEU n 1 215 LYS n 1 216 VAL n 1 217 LEU n 1 218 HIS n 1 219 ASN n 1 220 GLY n 1 221 THR n 1 222 LEU n 1 223 ALA n 1 224 GLU n 1 225 LEU n 1 226 GLN n 1 227 GLY n 1 228 LEU n 1 229 PRO n 1 230 HIS n 1 231 ILE n 1 232 ARG n 1 233 VAL n 1 234 PHE n 1 235 LEU n 1 236 ASP n 1 237 ASN n 1 238 ASN n 1 239 PRO n 1 240 TRP n 1 241 VAL n 1 242 CYS n 1 243 ASP n 1 244 CYS n 1 245 HIS n 1 246 MET n 1 247 ALA n 1 248 ASP n 1 249 MET n 1 250 VAL n 1 251 THR n 1 252 TRP n 1 253 LEU n 1 254 LYS n 1 255 GLU n 1 256 THR n 1 257 GLU n 1 258 VAL n 1 259 VAL n 1 260 GLN n 1 261 GLY n 1 262 LYS n 1 263 ASP n 1 264 ARG n 1 265 LEU n 1 266 THR n 1 267 CYS n 1 268 ALA n 1 269 TYR n 1 270 PRO n 1 271 GLU n 1 272 LYS n 1 273 MET n 1 274 ARG n 1 275 ASN n 1 276 ARG n 1 277 VAL n 1 278 LEU n 1 279 LEU n 1 280 GLU n 1 281 LEU n 1 282 ASN n 1 283 SER n 1 284 ALA n 1 285 ASP n 1 286 LEU n 1 287 ASP n 1 288 CYS n 1 289 ASP n 1 290 GLY n 1 291 THR n 1 292 GLU n 1 293 THR n 1 294 SER n 1 295 GLN n 1 296 VAL n 1 297 ALA n 1 298 PRO n 1 299 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HUMAN _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name HUMAN _entity_src_gen.pdbx_host_org_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 9606 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line 'HEK293S GNTI-' _entity_src_gen.pdbx_host_org_atcc CRL-3022 _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector PURD _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PURD-5T4/WAIF1ECTO _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code TPBG_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession Q13641 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4CNM _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 289 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q13641 _struct_ref_seq.db_align_beg 60 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 345 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 60 _struct_ref_seq.pdbx_auth_seq_align_end 345 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4CNM GLU A 1 ? UNP Q13641 ? ? 'expression tag' 57 1 1 4CNM THR A 2 ? UNP Q13641 ? ? 'expression tag' 58 2 1 4CNM GLY A 3 ? UNP Q13641 ? ? 'expression tag' 59 3 1 4CNM GLY A 290 ? UNP Q13641 ? ? 'expression tag' 346 4 1 4CNM THR A 291 ? UNP Q13641 ? ? 'expression tag' 347 5 1 4CNM GLU A 292 ? UNP Q13641 ? ? 'expression tag' 348 6 1 4CNM THR A 293 ? UNP Q13641 ? ? 'expression tag' 349 7 1 4CNM SER A 294 ? UNP Q13641 ? ? 'expression tag' 350 8 1 4CNM GLN A 295 ? UNP Q13641 ? ? 'expression tag' 351 9 1 4CNM VAL A 296 ? UNP Q13641 ? ? 'expression tag' 352 10 1 4CNM ALA A 297 ? UNP Q13641 ? ? 'expression tag' 353 11 1 4CNM PRO A 298 ? UNP Q13641 ? ? 'expression tag' 354 12 1 4CNM ALA A 299 ? UNP Q13641 ? ? 'expression tag' 355 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CIT non-polymer . 'CITRIC ACID' ? 'C6 H8 O7' 192.124 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PEG non-polymer . 'DI(HYDROXYETHYL)ETHER' ? 'C4 H10 O3' 106.120 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4CNM _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.9 _exptl_crystal.density_percent_sol 34 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;THE CRYSTALLIZATION DROP CONTAINED 100 NL OF CONCENTRATED 5T4 (5.5 MG/ML), 100 NL OF 25% W/V POLYETHYLENE GLYCOL (PEG) 3350, 0.1 M CITRATE PH 3.5, AND 0.5 NL OF 0.1 M NAOH ; # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.pdbx_collection_date 2013-04-26 _diffrn_detector.details 'KIRKPATRICK BAEZ BIMORPH MIRROR PAIR FOR HORIZONTAL AND VERTICAL FOCUSSING' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'DOUBLE CRYSTAL SI(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.06 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'DIAMOND BEAMLINE I02' _diffrn_source.pdbx_synchrotron_site Diamond _diffrn_source.pdbx_synchrotron_beamline I02 _diffrn_source.pdbx_wavelength 1.06 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4CNM _reflns.observed_criterion_sigma_I 3.1 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 49.31 _reflns.d_resolution_high 1.75 _reflns.number_obs 33062 _reflns.number_all ? _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs 0.07 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 17.90 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 9.6 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.75 _reflns_shell.d_res_low 1.80 _reflns_shell.percent_possible_all 99.2 _reflns_shell.Rmerge_I_obs 0.81 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.10 _reflns_shell.pdbx_redundancy 9.3 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4CNM _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 31330 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 43.94 _refine.ls_d_res_high 1.75 _refine.ls_percent_reflns_obs 99.76 _refine.ls_R_factor_obs 0.18365 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.18172 _refine.ls_R_factor_R_free 0.22153 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 1674 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.966 _refine.correlation_coeff_Fo_to_Fc_free 0.950 _refine.B_iso_mean 35.524 _refine.aniso_B[1][1] -1.32 _refine.aniso_B[2][2] 3.22 _refine.aniso_B[3][3] -1.90 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. U VALUES WITH TLS ADDED.' _refine.pdbx_starting_model 'PDB ENTRY 3ZYJ' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.111 _refine.pdbx_overall_ESU_R_Free 0.111 _refine.overall_SU_ML 0.081 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 5.141 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2201 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 130 _refine_hist.number_atoms_solvent 124 _refine_hist.number_atoms_total 2455 _refine_hist.d_res_high 1.75 _refine_hist.d_res_low 43.94 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.016 0.019 ? 2422 'X-RAY DIFFRACTION' ? r_bond_other_d 0.002 0.020 ? 2322 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.833 2.030 ? 3298 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.929 3.003 ? 5298 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.430 5.000 ? 291 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 35.200 23.889 ? 108 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 12.762 15.000 ? 378 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 18.166 15.000 ? 20 'X-RAY DIFFRACTION' ? r_chiral_restr 0.109 0.200 ? 389 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.009 0.020 ? 2761 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 521 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.943 2.060 ? 1152 'X-RAY DIFFRACTION' ? r_mcbond_other 1.942 2.059 ? 1151 'X-RAY DIFFRACTION' ? r_mcangle_it 2.814 3.075 ? 1444 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 3.656 2.856 ? 1270 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.750 _refine_ls_shell.d_res_low 1.795 _refine_ls_shell.number_reflns_R_work 2247 _refine_ls_shell.R_factor_R_work 0.279 _refine_ls_shell.percent_reflns_obs 99.29 _refine_ls_shell.R_factor_R_free 0.294 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 117 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 4CNM _struct.title 'Crystal structure of human 5T4 (Wnt-activated inhibitory factor 1, Trophoblast glycoprotein)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4CNM _struct_keywords.pdbx_keywords 'CELL ADHESION' _struct_keywords.text 'CELL ADHESION, WAIF1, TPBG, TROVAX, MVA-5T4, CANCER, SIGNALING, LEUCINE-RICH REPEATS, WNT/BETA-CATENIN SIGNALING PATHWAY' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 4 ? H N N 4 ? I N N 4 ? J N N 4 ? K N N 4 ? L N N 5 ? M N N 6 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLU A 131 ? GLN A 135 ? GLU A 187 GLN A 191 5 ? 5 HELX_P HELX_P2 2 SER A 138 ? ALA A 149 ? SER A 194 ALA A 205 1 ? 12 HELX_P HELX_P3 3 GLY A 150 ? ALA A 152 ? GLY A 206 ALA A 208 5 ? 3 HELX_P HELX_P4 4 PRO A 170 ? LEU A 177 ? PRO A 226 LEU A 233 1 ? 8 HELX_P HELX_P5 5 HIS A 218 ? GLN A 226 ? HIS A 274 GLN A 282 1 ? 9 HELX_P HELX_P6 6 ASP A 243 ? HIS A 245 ? ASP A 299 HIS A 301 5 ? 3 HELX_P HELX_P7 7 MET A 246 ? THR A 256 ? MET A 302 THR A 312 1 ? 11 HELX_P HELX_P8 8 GLY A 261 ? LEU A 265 ? GLY A 317 LEU A 321 5 ? 5 HELX_P HELX_P9 9 PRO A 270 ? ARG A 274 ? PRO A 326 ARG A 330 5 ? 5 HELX_P HELX_P10 10 LEU A 278 ? LEU A 281 ? LEU A 334 LEU A 337 5 ? 4 HELX_P HELX_P11 11 ASN A 282 ? LEU A 286 ? ASN A 338 LEU A 342 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 6 SG ? ? ? 1_555 A CYS 12 SG ? ? A CYS 62 A CYS 68 1_555 ? ? ? ? ? ? ? 2.080 ? ? disulf2 disulf ? ? A CYS 10 SG ? ? ? 1_555 A CYS 21 SG ? ? A CYS 66 A CYS 77 1_555 ? ? ? ? ? ? ? 2.039 ? ? disulf3 disulf ? ? A CYS 242 SG ? ? ? 1_555 A CYS 267 SG ? ? A CYS 298 A CYS 323 1_555 ? ? ? ? ? ? ? 2.042 ? ? disulf4 disulf ? ? A CYS 244 SG ? ? ? 1_555 A CYS 288 SG ? ? A CYS 300 A CYS 344 1_555 ? ? ? ? ? ? ? 2.078 ? ? covale1 covale one ? A ASN 25 ND2 ? ? ? 1_555 D NAG . C1 ? ? A ASN 81 A NAG 1347 1_555 ? ? ? ? ? ? ? 1.447 ? N-Glycosylation covale2 covale one ? A ASN 68 ND2 ? ? ? 1_555 B NAG . C1 ? ? A ASN 124 B NAG 1 1_555 ? ? ? ? ? ? ? 1.415 ? N-Glycosylation covale3 covale one ? A ASN 187 ND2 ? ? ? 1_555 E NAG . C1 ? ? A ASN 243 A NAG 1348 1_555 ? ? ? ? ? ? ? 1.475 ? N-Glycosylation covale4 covale one ? A ASN 200 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 256 A NAG 1346 1_555 ? ? ? ? ? ? ? 1.465 ? N-Glycosylation covale5 covale one ? A ASN 219 ND2 ? ? ? 1_555 F NAG . C1 ? ? A ASN 275 A NAG 1349 1_555 ? ? ? ? ? ? ? 1.444 ? N-Glycosylation covale6 covale both ? B NAG . O4 ? ? ? 1_555 B NAG . C1 ? ? B NAG 1 B NAG 2 1_555 ? ? ? ? ? ? ? 1.438 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ARG 58 A . ? ARG 114 A PRO 59 A ? PRO 115 A 1 -0.66 2 TYR 269 A . ? TYR 325 A PRO 270 A ? PRO 326 A 1 -9.43 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 11 ? AB ? 3 ? AC ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? parallel AA 3 4 ? parallel AA 4 5 ? parallel AA 5 6 ? parallel AA 6 7 ? parallel AA 7 8 ? parallel AA 8 9 ? parallel AA 9 10 ? parallel AA 10 11 ? parallel AB 1 2 ? parallel AB 2 3 ? parallel AC 1 2 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 GLU A 11 ? SER A 13 ? GLU A 67 SER A 69 AA 2 THR A 18 ? LYS A 20 ? THR A 74 LYS A 76 AA 3 ASN A 39 ? PHE A 41 ? ASN A 95 PHE A 97 AA 4 ALA A 66 ? ASN A 68 ? ALA A 122 ASN A 124 AA 5 GLN A 90 ? ASP A 92 ? GLN A 146 ASP A 148 AA 6 GLU A 121 ? ILE A 123 ? GLU A 177 ILE A 179 AA 7 ARG A 158 ? GLU A 160 ? ARG A 214 GLU A 216 AA 8 HIS A 182 ? ASP A 184 ? HIS A 238 ASP A 240 AA 9 SER A 206 ? HIS A 208 ? SER A 262 HIS A 264 AA 10 ARG A 232 ? PHE A 234 ? ARG A 288 PHE A 290 AA 11 VAL A 259 ? GLN A 260 ? VAL A 315 GLN A 316 AB 1 ALA A 48 ? LEU A 50 ? ALA A 104 LEU A 106 AB 2 LEU A 74 ? VAL A 77 ? LEU A 130 VAL A 133 AB 3 ASP A 100 ? LEU A 101 ? ASP A 156 LEU A 157 AC 1 TRP A 240 ? VAL A 241 ? TRP A 296 VAL A 297 AC 2 CYS A 267 ? TYR A 269 ? CYS A 323 TYR A 325 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N SER A 13 ? N SER A 69 O THR A 18 ? O THR A 74 AA 2 3 N VAL A 19 ? N VAL A 75 O ASN A 39 ? O ASN A 95 AA 3 4 N LEU A 40 ? N LEU A 96 O ALA A 66 ? O ALA A 122 AA 4 5 N LEU A 67 ? N LEU A 123 O GLN A 90 ? O GLN A 146 AA 5 6 N LEU A 91 ? N LEU A 147 O GLU A 121 ? O GLU A 177 AA 6 7 N LEU A 122 ? N LEU A 178 O ARG A 158 ? O ARG A 214 AA 7 8 N LEU A 159 ? N LEU A 215 O HIS A 182 ? O HIS A 238 AA 8 9 N LEU A 183 ? N LEU A 239 O SER A 206 ? O SER A 262 AA 9 10 N LEU A 207 ? N LEU A 263 O ARG A 232 ? O ARG A 288 AA 10 11 O VAL A 233 ? O VAL A 289 N GLN A 260 ? N GLN A 316 AB 1 2 O ALA A 48 ? O ALA A 104 N ASP A 75 ? N ASP A 131 AB 2 3 N VAL A 77 ? N VAL A 133 O ASP A 100 ? O ASP A 156 AC 1 2 O TRP A 240 ? O TRP A 296 N ALA A 268 ? N ALA A 324 # _database_PDB_matrix.entry_id 4CNM _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4CNM _atom_sites.fract_transf_matrix[1][1] 0.020280 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014857 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010376 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLU 1 57 57 GLU GLU A . n A 1 2 THR 2 58 58 THR THR A . n A 1 3 GLY 3 59 59 GLY GLY A . n A 1 4 ASP 4 60 60 ASP ASP A . n A 1 5 GLN 5 61 61 GLN GLN A . n A 1 6 CYS 6 62 62 CYS CYS A . n A 1 7 PRO 7 63 63 PRO PRO A . n A 1 8 ALA 8 64 64 ALA ALA A . n A 1 9 LEU 9 65 65 LEU LEU A . n A 1 10 CYS 10 66 66 CYS CYS A . n A 1 11 GLU 11 67 67 GLU GLU A . n A 1 12 CYS 12 68 68 CYS CYS A . n A 1 13 SER 13 69 69 SER SER A . n A 1 14 GLU 14 70 70 GLU GLU A . n A 1 15 ALA 15 71 71 ALA ALA A . n A 1 16 ALA 16 72 72 ALA ALA A . n A 1 17 ARG 17 73 73 ARG ARG A . n A 1 18 THR 18 74 74 THR THR A . n A 1 19 VAL 19 75 75 VAL VAL A . n A 1 20 LYS 20 76 76 LYS LYS A . n A 1 21 CYS 21 77 77 CYS CYS A . n A 1 22 VAL 22 78 78 VAL VAL A . n A 1 23 ASN 23 79 79 ASN ASN A . n A 1 24 ARG 24 80 80 ARG ARG A . n A 1 25 ASN 25 81 81 ASN ASN A . n A 1 26 LEU 26 82 82 LEU LEU A . n A 1 27 THR 27 83 83 THR THR A . n A 1 28 GLU 28 84 84 GLU GLU A . n A 1 29 VAL 29 85 85 VAL VAL A . n A 1 30 PRO 30 86 86 PRO PRO A . n A 1 31 THR 31 87 87 THR THR A . n A 1 32 ASP 32 88 88 ASP ASP A . n A 1 33 LEU 33 89 89 LEU LEU A . n A 1 34 PRO 34 90 90 PRO PRO A . n A 1 35 ALA 35 91 91 ALA ALA A . n A 1 36 TYR 36 92 92 TYR TYR A . n A 1 37 VAL 37 93 93 VAL VAL A . n A 1 38 ARG 38 94 94 ARG ARG A . n A 1 39 ASN 39 95 95 ASN ASN A . n A 1 40 LEU 40 96 96 LEU LEU A . n A 1 41 PHE 41 97 97 PHE PHE A . n A 1 42 LEU 42 98 98 LEU LEU A . n A 1 43 THR 43 99 99 THR THR A . n A 1 44 GLY 44 100 100 GLY GLY A . n A 1 45 ASN 45 101 101 ASN ASN A . n A 1 46 GLN 46 102 102 GLN GLN A . n A 1 47 LEU 47 103 103 LEU LEU A . n A 1 48 ALA 48 104 104 ALA ALA A . n A 1 49 VAL 49 105 105 VAL VAL A . n A 1 50 LEU 50 106 106 LEU LEU A . n A 1 51 PRO 51 107 107 PRO PRO A . n A 1 52 ALA 52 108 108 ALA ALA A . n A 1 53 GLY 53 109 109 GLY GLY A . n A 1 54 ALA 54 110 110 ALA ALA A . n A 1 55 PHE 55 111 111 PHE PHE A . n A 1 56 ALA 56 112 112 ALA ALA A . n A 1 57 ARG 57 113 113 ARG ARG A . n A 1 58 ARG 58 114 114 ARG ARG A . n A 1 59 PRO 59 115 115 PRO PRO A . n A 1 60 PRO 60 116 116 PRO PRO A . n A 1 61 LEU 61 117 117 LEU LEU A . n A 1 62 ALA 62 118 118 ALA ALA A . n A 1 63 GLU 63 119 119 GLU GLU A . n A 1 64 LEU 64 120 120 LEU LEU A . n A 1 65 ALA 65 121 121 ALA ALA A . n A 1 66 ALA 66 122 122 ALA ALA A . n A 1 67 LEU 67 123 123 LEU LEU A . n A 1 68 ASN 68 124 124 ASN ASN A . n A 1 69 LEU 69 125 125 LEU LEU A . n A 1 70 SER 70 126 126 SER SER A . n A 1 71 GLY 71 127 127 GLY GLY A . n A 1 72 SER 72 128 128 SER SER A . n A 1 73 ARG 73 129 129 ARG ARG A . n A 1 74 LEU 74 130 130 LEU LEU A . n A 1 75 ASP 75 131 131 ASP ASP A . n A 1 76 GLU 76 132 132 GLU GLU A . n A 1 77 VAL 77 133 133 VAL VAL A . n A 1 78 ARG 78 134 134 ARG ARG A . n A 1 79 ALA 79 135 135 ALA ALA A . n A 1 80 GLY 80 136 136 GLY GLY A . n A 1 81 ALA 81 137 137 ALA ALA A . n A 1 82 PHE 82 138 138 PHE PHE A . n A 1 83 GLU 83 139 139 GLU GLU A . n A 1 84 HIS 84 140 140 HIS HIS A . n A 1 85 LEU 85 141 141 LEU LEU A . n A 1 86 PRO 86 142 142 PRO PRO A . n A 1 87 SER 87 143 143 SER SER A . n A 1 88 LEU 88 144 144 LEU LEU A . n A 1 89 ARG 89 145 145 ARG ARG A . n A 1 90 GLN 90 146 146 GLN GLN A . n A 1 91 LEU 91 147 147 LEU LEU A . n A 1 92 ASP 92 148 148 ASP ASP A . n A 1 93 LEU 93 149 149 LEU LEU A . n A 1 94 SER 94 150 150 SER SER A . n A 1 95 HIS 95 151 151 HIS HIS A . n A 1 96 ASN 96 152 152 ASN ASN A . n A 1 97 PRO 97 153 153 PRO PRO A . n A 1 98 LEU 98 154 154 LEU LEU A . n A 1 99 ALA 99 155 155 ALA ALA A . n A 1 100 ASP 100 156 156 ASP ASP A . n A 1 101 LEU 101 157 157 LEU LEU A . n A 1 102 SER 102 158 158 SER SER A . n A 1 103 PRO 103 159 159 PRO PRO A . n A 1 104 PHE 104 160 160 PHE PHE A . n A 1 105 ALA 105 161 161 ALA ALA A . n A 1 106 PHE 106 162 162 PHE PHE A . n A 1 107 SER 107 163 163 SER SER A . n A 1 108 GLY 108 164 164 GLY GLY A . n A 1 109 SER 109 165 165 SER SER A . n A 1 110 ASN 110 166 166 ASN ASN A . n A 1 111 ALA 111 167 ? ? ? A . n A 1 112 SER 112 168 ? ? ? A . n A 1 113 VAL 113 169 ? ? ? A . n A 1 114 SER 114 170 ? ? ? A . n A 1 115 ALA 115 171 ? ? ? A . n A 1 116 PRO 116 172 172 PRO PRO A . n A 1 117 SER 117 173 173 SER SER A . n A 1 118 PRO 118 174 174 PRO PRO A . n A 1 119 LEU 119 175 175 LEU LEU A . n A 1 120 VAL 120 176 176 VAL VAL A . n A 1 121 GLU 121 177 177 GLU GLU A . n A 1 122 LEU 122 178 178 LEU LEU A . n A 1 123 ILE 123 179 179 ILE ILE A . n A 1 124 LEU 124 180 180 LEU LEU A . n A 1 125 ASN 125 181 181 ASN ASN A . n A 1 126 HIS 126 182 182 HIS HIS A . n A 1 127 ILE 127 183 183 ILE ILE A . n A 1 128 VAL 128 184 184 VAL VAL A . n A 1 129 PRO 129 185 185 PRO PRO A . n A 1 130 PRO 130 186 186 PRO PRO A . n A 1 131 GLU 131 187 187 GLU GLU A . n A 1 132 ASP 132 188 188 ASP ASP A . n A 1 133 GLU 133 189 189 GLU GLU A . n A 1 134 ARG 134 190 190 ARG ARG A . n A 1 135 GLN 135 191 191 GLN GLN A . n A 1 136 ASN 136 192 192 ASN ASN A . n A 1 137 ARG 137 193 193 ARG ARG A . n A 1 138 SER 138 194 194 SER SER A . n A 1 139 PHE 139 195 195 PHE PHE A . n A 1 140 GLU 140 196 196 GLU GLU A . n A 1 141 GLY 141 197 197 GLY GLY A . n A 1 142 MET 142 198 198 MET MET A . n A 1 143 VAL 143 199 199 VAL VAL A . n A 1 144 VAL 144 200 200 VAL VAL A . n A 1 145 ALA 145 201 201 ALA ALA A . n A 1 146 ALA 146 202 202 ALA ALA A . n A 1 147 LEU 147 203 203 LEU LEU A . n A 1 148 LEU 148 204 204 LEU LEU A . n A 1 149 ALA 149 205 205 ALA ALA A . n A 1 150 GLY 150 206 206 GLY GLY A . n A 1 151 ARG 151 207 207 ARG ARG A . n A 1 152 ALA 152 208 208 ALA ALA A . n A 1 153 LEU 153 209 209 LEU LEU A . n A 1 154 GLN 154 210 210 GLN GLN A . n A 1 155 GLY 155 211 211 GLY GLY A . n A 1 156 LEU 156 212 212 LEU LEU A . n A 1 157 ARG 157 213 213 ARG ARG A . n A 1 158 ARG 158 214 214 ARG ARG A . n A 1 159 LEU 159 215 215 LEU LEU A . n A 1 160 GLU 160 216 216 GLU GLU A . n A 1 161 LEU 161 217 217 LEU LEU A . n A 1 162 ALA 162 218 218 ALA ALA A . n A 1 163 SER 163 219 219 SER SER A . n A 1 164 ASN 164 220 220 ASN ASN A . n A 1 165 HIS 165 221 221 HIS HIS A . n A 1 166 PHE 166 222 222 PHE PHE A . n A 1 167 LEU 167 223 223 LEU LEU A . n A 1 168 TYR 168 224 224 TYR TYR A . n A 1 169 LEU 169 225 225 LEU LEU A . n A 1 170 PRO 170 226 226 PRO PRO A . n A 1 171 ARG 171 227 227 ARG ARG A . n A 1 172 ASP 172 228 228 ASP ASP A . n A 1 173 VAL 173 229 229 VAL VAL A . n A 1 174 LEU 174 230 230 LEU LEU A . n A 1 175 ALA 175 231 231 ALA ALA A . n A 1 176 GLN 176 232 232 GLN GLN A . n A 1 177 LEU 177 233 233 LEU LEU A . n A 1 178 PRO 178 234 234 PRO PRO A . n A 1 179 SER 179 235 235 SER SER A . n A 1 180 LEU 180 236 236 LEU LEU A . n A 1 181 ARG 181 237 237 ARG ARG A . n A 1 182 HIS 182 238 238 HIS HIS A . n A 1 183 LEU 183 239 239 LEU LEU A . n A 1 184 ASP 184 240 240 ASP ASP A . n A 1 185 LEU 185 241 241 LEU LEU A . n A 1 186 SER 186 242 242 SER SER A . n A 1 187 ASN 187 243 243 ASN ASN A . n A 1 188 ASN 188 244 244 ASN ASN A . n A 1 189 SER 189 245 245 SER SER A . n A 1 190 LEU 190 246 246 LEU LEU A . n A 1 191 VAL 191 247 247 VAL VAL A . n A 1 192 SER 192 248 248 SER SER A . n A 1 193 LEU 193 249 249 LEU LEU A . n A 1 194 THR 194 250 250 THR THR A . n A 1 195 TYR 195 251 251 TYR TYR A . n A 1 196 VAL 196 252 252 VAL VAL A . n A 1 197 SER 197 253 253 SER SER A . n A 1 198 PHE 198 254 254 PHE PHE A . n A 1 199 ARG 199 255 255 ARG ARG A . n A 1 200 ASN 200 256 256 ASN ASN A . n A 1 201 LEU 201 257 257 LEU LEU A . n A 1 202 THR 202 258 258 THR THR A . n A 1 203 HIS 203 259 259 HIS HIS A . n A 1 204 LEU 204 260 260 LEU LEU A . n A 1 205 GLU 205 261 261 GLU GLU A . n A 1 206 SER 206 262 262 SER SER A . n A 1 207 LEU 207 263 263 LEU LEU A . n A 1 208 HIS 208 264 264 HIS HIS A . n A 1 209 LEU 209 265 265 LEU LEU A . n A 1 210 GLU 210 266 266 GLU GLU A . n A 1 211 ASP 211 267 267 ASP ASP A . n A 1 212 ASN 212 268 268 ASN ASN A . n A 1 213 ALA 213 269 269 ALA ALA A . n A 1 214 LEU 214 270 270 LEU LEU A . n A 1 215 LYS 215 271 271 LYS LYS A . n A 1 216 VAL 216 272 272 VAL VAL A . n A 1 217 LEU 217 273 273 LEU LEU A . n A 1 218 HIS 218 274 274 HIS HIS A . n A 1 219 ASN 219 275 275 ASN ASN A . n A 1 220 GLY 220 276 276 GLY GLY A . n A 1 221 THR 221 277 277 THR THR A . n A 1 222 LEU 222 278 278 LEU LEU A . n A 1 223 ALA 223 279 279 ALA ALA A . n A 1 224 GLU 224 280 280 GLU GLU A . n A 1 225 LEU 225 281 281 LEU LEU A . n A 1 226 GLN 226 282 282 GLN GLN A . n A 1 227 GLY 227 283 283 GLY GLY A . n A 1 228 LEU 228 284 284 LEU LEU A . n A 1 229 PRO 229 285 285 PRO PRO A . n A 1 230 HIS 230 286 286 HIS HIS A . n A 1 231 ILE 231 287 287 ILE ILE A . n A 1 232 ARG 232 288 288 ARG ARG A . n A 1 233 VAL 233 289 289 VAL VAL A . n A 1 234 PHE 234 290 290 PHE PHE A . n A 1 235 LEU 235 291 291 LEU LEU A . n A 1 236 ASP 236 292 292 ASP ASP A . n A 1 237 ASN 237 293 293 ASN ASN A . n A 1 238 ASN 238 294 294 ASN ASN A . n A 1 239 PRO 239 295 295 PRO PRO A . n A 1 240 TRP 240 296 296 TRP TRP A . n A 1 241 VAL 241 297 297 VAL VAL A . n A 1 242 CYS 242 298 298 CYS CYS A . n A 1 243 ASP 243 299 299 ASP ASP A . n A 1 244 CYS 244 300 300 CYS CYS A . n A 1 245 HIS 245 301 301 HIS HIS A . n A 1 246 MET 246 302 302 MET MET A . n A 1 247 ALA 247 303 303 ALA ALA A . n A 1 248 ASP 248 304 304 ASP ASP A . n A 1 249 MET 249 305 305 MET MET A . n A 1 250 VAL 250 306 306 VAL VAL A . n A 1 251 THR 251 307 307 THR THR A . n A 1 252 TRP 252 308 308 TRP TRP A . n A 1 253 LEU 253 309 309 LEU LEU A . n A 1 254 LYS 254 310 310 LYS LYS A . n A 1 255 GLU 255 311 311 GLU GLU A . n A 1 256 THR 256 312 312 THR THR A . n A 1 257 GLU 257 313 313 GLU GLU A . n A 1 258 VAL 258 314 314 VAL VAL A . n A 1 259 VAL 259 315 315 VAL VAL A . n A 1 260 GLN 260 316 316 GLN GLN A . n A 1 261 GLY 261 317 317 GLY GLY A . n A 1 262 LYS 262 318 318 LYS LYS A . n A 1 263 ASP 263 319 319 ASP ASP A . n A 1 264 ARG 264 320 320 ARG ARG A . n A 1 265 LEU 265 321 321 LEU LEU A . n A 1 266 THR 266 322 322 THR THR A . n A 1 267 CYS 267 323 323 CYS CYS A . n A 1 268 ALA 268 324 324 ALA ALA A . n A 1 269 TYR 269 325 325 TYR TYR A . n A 1 270 PRO 270 326 326 PRO PRO A . n A 1 271 GLU 271 327 327 GLU GLU A . n A 1 272 LYS 272 328 328 LYS LYS A . n A 1 273 MET 273 329 329 MET MET A . n A 1 274 ARG 274 330 330 ARG ARG A . n A 1 275 ASN 275 331 331 ASN ASN A . n A 1 276 ARG 276 332 332 ARG ARG A . n A 1 277 VAL 277 333 333 VAL VAL A . n A 1 278 LEU 278 334 334 LEU LEU A . n A 1 279 LEU 279 335 335 LEU LEU A . n A 1 280 GLU 280 336 336 GLU GLU A . n A 1 281 LEU 281 337 337 LEU LEU A . n A 1 282 ASN 282 338 338 ASN ASN A . n A 1 283 SER 283 339 339 SER SER A . n A 1 284 ALA 284 340 340 ALA ALA A . n A 1 285 ASP 285 341 341 ASP ASP A . n A 1 286 LEU 286 342 342 LEU LEU A . n A 1 287 ASP 287 343 343 ASP ASP A . n A 1 288 CYS 288 344 344 CYS CYS A . n A 1 289 ASP 289 345 ? ? ? A . n A 1 290 GLY 290 346 ? ? ? A . n A 1 291 THR 291 347 ? ? ? A . n A 1 292 GLU 292 348 ? ? ? A . n A 1 293 THR 293 349 ? ? ? A . n A 1 294 SER 294 350 ? ? ? A . n A 1 295 GLN 295 351 ? ? ? A . n A 1 296 VAL 296 352 ? ? ? A . n A 1 297 ALA 297 353 ? ? ? A . n A 1 298 PRO 298 354 ? ? ? A . n A 1 299 ALA 299 355 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NAG 1 1346 1346 NAG NAG A . D 3 NAG 1 1347 1347 NAG NAG A . E 3 NAG 1 1348 1348 NAG NAG A . F 3 NAG 1 1349 1349 NAG NAG A . G 4 PEG 1 1351 1351 PEG PEG A . H 4 PEG 1 1352 1352 PEG PEG A . I 4 PEG 1 1353 1353 PEG PEG A . J 4 PEG 1 1354 1354 PEG PEG A . K 4 PEG 1 1355 1355 PEG PEG A . L 5 CIT 1 1356 1356 CIT CIT A . M 6 HOH 1 2001 2001 HOH HOH A . M 6 HOH 2 2002 2002 HOH HOH A . M 6 HOH 3 2003 2003 HOH HOH A . M 6 HOH 4 2004 2004 HOH HOH A . M 6 HOH 5 2005 2005 HOH HOH A . M 6 HOH 6 2006 2006 HOH HOH A . M 6 HOH 7 2007 2007 HOH HOH A . M 6 HOH 8 2008 2008 HOH HOH A . M 6 HOH 9 2009 2009 HOH HOH A . M 6 HOH 10 2010 2010 HOH HOH A . M 6 HOH 11 2011 2011 HOH HOH A . M 6 HOH 12 2012 2012 HOH HOH A . M 6 HOH 13 2013 2013 HOH HOH A . M 6 HOH 14 2014 2014 HOH HOH A . M 6 HOH 15 2015 2015 HOH HOH A . M 6 HOH 16 2016 2016 HOH HOH A . M 6 HOH 17 2017 2017 HOH HOH A . M 6 HOH 18 2018 2018 HOH HOH A . M 6 HOH 19 2019 2019 HOH HOH A . M 6 HOH 20 2020 2020 HOH HOH A . M 6 HOH 21 2021 2021 HOH HOH A . M 6 HOH 22 2022 2022 HOH HOH A . M 6 HOH 23 2023 2023 HOH HOH A . M 6 HOH 24 2024 2024 HOH HOH A . M 6 HOH 25 2025 2025 HOH HOH A . M 6 HOH 26 2026 2026 HOH HOH A . M 6 HOH 27 2027 2027 HOH HOH A . M 6 HOH 28 2028 2028 HOH HOH A . M 6 HOH 29 2029 2029 HOH HOH A . M 6 HOH 30 2030 2030 HOH HOH A . M 6 HOH 31 2031 2031 HOH HOH A . M 6 HOH 32 2032 2032 HOH HOH A . M 6 HOH 33 2033 2033 HOH HOH A . M 6 HOH 34 2034 2034 HOH HOH A . M 6 HOH 35 2035 2035 HOH HOH A . M 6 HOH 36 2036 2036 HOH HOH A . M 6 HOH 37 2037 2037 HOH HOH A . M 6 HOH 38 2038 2038 HOH HOH A . M 6 HOH 39 2039 2039 HOH HOH A . M 6 HOH 40 2040 2040 HOH HOH A . M 6 HOH 41 2041 2041 HOH HOH A . M 6 HOH 42 2042 2042 HOH HOH A . M 6 HOH 43 2043 2043 HOH HOH A . M 6 HOH 44 2044 2044 HOH HOH A . M 6 HOH 45 2045 2045 HOH HOH A . M 6 HOH 46 2046 2046 HOH HOH A . M 6 HOH 47 2047 2047 HOH HOH A . M 6 HOH 48 2048 2048 HOH HOH A . M 6 HOH 49 2049 2049 HOH HOH A . M 6 HOH 50 2050 2050 HOH HOH A . M 6 HOH 51 2051 2051 HOH HOH A . M 6 HOH 52 2052 2052 HOH HOH A . M 6 HOH 53 2053 2053 HOH HOH A . M 6 HOH 54 2054 2054 HOH HOH A . M 6 HOH 55 2055 2055 HOH HOH A . M 6 HOH 56 2056 2056 HOH HOH A . M 6 HOH 57 2057 2057 HOH HOH A . M 6 HOH 58 2058 2058 HOH HOH A . M 6 HOH 59 2059 2059 HOH HOH A . M 6 HOH 60 2060 2060 HOH HOH A . M 6 HOH 61 2061 2061 HOH HOH A . M 6 HOH 62 2062 2062 HOH HOH A . M 6 HOH 63 2063 2063 HOH HOH A . M 6 HOH 64 2064 2064 HOH HOH A . M 6 HOH 65 2065 2065 HOH HOH A . M 6 HOH 66 2066 2066 HOH HOH A . M 6 HOH 67 2067 2067 HOH HOH A . M 6 HOH 68 2068 2068 HOH HOH A . M 6 HOH 69 2069 2069 HOH HOH A . M 6 HOH 70 2070 2070 HOH HOH A . M 6 HOH 71 2071 2071 HOH HOH A . M 6 HOH 72 2072 2072 HOH HOH A . M 6 HOH 73 2073 2073 HOH HOH A . M 6 HOH 74 2074 2074 HOH HOH A . M 6 HOH 75 2075 2075 HOH HOH A . M 6 HOH 76 2076 2076 HOH HOH A . M 6 HOH 77 2077 2077 HOH HOH A . M 6 HOH 78 2078 2078 HOH HOH A . M 6 HOH 79 2079 2079 HOH HOH A . M 6 HOH 80 2080 2080 HOH HOH A . M 6 HOH 81 2081 2081 HOH HOH A . M 6 HOH 82 2082 2082 HOH HOH A . M 6 HOH 83 2083 2083 HOH HOH A . M 6 HOH 84 2084 2084 HOH HOH A . M 6 HOH 85 2085 2085 HOH HOH A . M 6 HOH 86 2086 2086 HOH HOH A . M 6 HOH 87 2087 2087 HOH HOH A . M 6 HOH 88 2088 2088 HOH HOH A . M 6 HOH 89 2089 2089 HOH HOH A . M 6 HOH 90 2090 2090 HOH HOH A . M 6 HOH 91 2091 2091 HOH HOH A . M 6 HOH 92 2092 2092 HOH HOH A . M 6 HOH 93 2093 2093 HOH HOH A . M 6 HOH 94 2094 2094 HOH HOH A . M 6 HOH 95 2095 2095 HOH HOH A . M 6 HOH 96 2096 2096 HOH HOH A . M 6 HOH 97 2097 2097 HOH HOH A . M 6 HOH 98 2098 2098 HOH HOH A . M 6 HOH 99 2099 2099 HOH HOH A . M 6 HOH 100 2100 2100 HOH HOH A . M 6 HOH 101 2101 2101 HOH HOH A . M 6 HOH 102 2102 2102 HOH HOH A . M 6 HOH 103 2103 2103 HOH HOH A . M 6 HOH 104 2104 2104 HOH HOH A . M 6 HOH 105 2105 2105 HOH HOH A . M 6 HOH 106 2106 2106 HOH HOH A . M 6 HOH 107 2107 2107 HOH HOH A . M 6 HOH 108 2108 2108 HOH HOH A . M 6 HOH 109 2109 2109 HOH HOH A . M 6 HOH 110 2110 2110 HOH HOH A . M 6 HOH 111 2111 2111 HOH HOH A . M 6 HOH 112 2112 2112 HOH HOH A . M 6 HOH 113 2113 2113 HOH HOH A . M 6 HOH 114 2114 2114 HOH HOH A . M 6 HOH 115 2115 2115 HOH HOH A . M 6 HOH 116 2116 2116 HOH HOH A . M 6 HOH 117 2117 2117 HOH HOH A . M 6 HOH 118 2118 2118 HOH HOH A . M 6 HOH 119 2119 2119 HOH HOH A . M 6 HOH 120 2120 2120 HOH HOH A . M 6 HOH 121 2121 2121 HOH HOH A . M 6 HOH 122 2122 2122 HOH HOH A . M 6 HOH 123 2123 2123 HOH HOH A . M 6 HOH 124 2124 2124 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A ASN 25 A ASN 81 ? ASN 'GLYCOSYLATION SITE' 2 A ASN 68 A ASN 124 ? ASN 'GLYCOSYLATION SITE' 3 A ASN 187 A ASN 243 ? ASN 'GLYCOSYLATION SITE' 4 A ASN 200 A ASN 256 ? ASN 'GLYCOSYLATION SITE' 5 A ASN 219 A ASN 275 ? ASN 'GLYCOSYLATION SITE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-02-26 2 'Structure model' 1 1 2014-03-12 3 'Structure model' 1 2 2014-04-23 4 'Structure model' 2 0 2020-07-29 5 'Structure model' 2 1 2023-12-20 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' Advisory 4 4 'Structure model' 'Atomic model' 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' Other 8 4 'Structure model' 'Structure summary' 9 5 'Structure model' 'Data collection' 10 5 'Structure model' 'Database references' 11 5 'Structure model' 'Refinement description' 12 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' atom_site 2 4 'Structure model' chem_comp 3 4 'Structure model' entity 4 4 'Structure model' pdbx_branch_scheme 5 4 'Structure model' pdbx_chem_comp_identifier 6 4 'Structure model' pdbx_database_status 7 4 'Structure model' pdbx_entity_branch 8 4 'Structure model' pdbx_entity_branch_descriptor 9 4 'Structure model' pdbx_entity_branch_link 10 4 'Structure model' pdbx_entity_branch_list 11 4 'Structure model' pdbx_entity_nonpoly 12 4 'Structure model' pdbx_nonpoly_scheme 13 4 'Structure model' pdbx_struct_assembly_gen 14 4 'Structure model' pdbx_unobs_or_zero_occ_atoms 15 4 'Structure model' struct_asym 16 4 'Structure model' struct_conn 17 4 'Structure model' struct_site 18 4 'Structure model' struct_site_gen 19 5 'Structure model' chem_comp 20 5 'Structure model' chem_comp_atom 21 5 'Structure model' chem_comp_bond 22 5 'Structure model' database_2 23 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_atom_site.auth_asym_id' 2 4 'Structure model' '_atom_site.auth_seq_id' 3 4 'Structure model' '_atom_site.label_asym_id' 4 4 'Structure model' '_atom_site.label_entity_id' 5 4 'Structure model' '_chem_comp.name' 6 4 'Structure model' '_chem_comp.type' 7 4 'Structure model' '_pdbx_database_status.status_code_sf' 8 4 'Structure model' '_pdbx_entity_nonpoly.entity_id' 9 4 'Structure model' '_pdbx_entity_nonpoly.name' 10 4 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 11 4 'Structure model' '_pdbx_unobs_or_zero_occ_atoms.label_asym_id' 12 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 13 4 'Structure model' '_struct_conn.pdbx_role' 14 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 15 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 16 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 17 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 18 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 19 5 'Structure model' '_chem_comp.pdbx_synonyms' 20 5 'Structure model' '_database_2.pdbx_DOI' 21 5 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 22.7534 _pdbx_refine_tls.origin_y -1.2691 _pdbx_refine_tls.origin_z -12.0136 _pdbx_refine_tls.T[1][1] 0.0833 _pdbx_refine_tls.T[2][2] 0.0255 _pdbx_refine_tls.T[3][3] 0.0719 _pdbx_refine_tls.T[1][2] -0.0026 _pdbx_refine_tls.T[1][3] -0.0007 _pdbx_refine_tls.T[2][3] 0.0066 _pdbx_refine_tls.L[1][1] 1.4734 _pdbx_refine_tls.L[2][2] 0.1783 _pdbx_refine_tls.L[3][3] 1.4536 _pdbx_refine_tls.L[1][2] -0.3226 _pdbx_refine_tls.L[1][3] 0.1884 _pdbx_refine_tls.L[2][3] -0.0551 _pdbx_refine_tls.S[1][1] -0.0389 _pdbx_refine_tls.S[1][2] -0.0897 _pdbx_refine_tls.S[1][3] -0.0024 _pdbx_refine_tls.S[2][1] -0.0045 _pdbx_refine_tls.S[2][2] 0.0091 _pdbx_refine_tls.S[2][3] -0.0277 _pdbx_refine_tls.S[3][1] 0.0394 _pdbx_refine_tls.S[3][2] -0.1719 _pdbx_refine_tls.S[3][3] 0.0298 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 57 _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 344 _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.7.0032 ? 1 XDS 'data reduction' . ? 2 Aimless 'data scaling' . ? 3 PHASER phasing . ? 4 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 88 ? ? -92.90 55.97 2 1 ALA A 104 ? ? 68.12 -58.80 3 1 LEU A 141 ? ? -119.81 77.51 4 1 SER A 165 ? ? -93.95 -151.78 5 1 ASN A 192 ? ? -102.10 57.48 6 1 LEU A 209 ? ? -90.65 53.56 7 1 ASN A 244 ? ? -110.68 -157.84 8 1 ASN A 268 ? ? -104.05 -157.79 9 1 GLN A 282 ? ? -49.80 -17.23 10 1 ASP A 299 ? ? -115.16 -164.79 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASN 166 ? CG ? A ASN 110 CG 2 1 Y 1 A ASN 166 ? OD1 ? A ASN 110 OD1 3 1 Y 1 A ASN 166 ? ND2 ? A ASN 110 ND2 4 1 N 1 A PEG 1352 ? C1 ? H PEG 1 C1 5 1 N 1 A PEG 1352 ? O1 ? H PEG 1 O1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ALA 167 ? A ALA 111 2 1 Y 1 A SER 168 ? A SER 112 3 1 Y 1 A VAL 169 ? A VAL 113 4 1 Y 1 A SER 170 ? A SER 114 5 1 Y 1 A ALA 171 ? A ALA 115 6 1 Y 1 A ASP 345 ? A ASP 289 7 1 Y 1 A GLY 346 ? A GLY 290 8 1 Y 1 A THR 347 ? A THR 291 9 1 Y 1 A GLU 348 ? A GLU 292 10 1 Y 1 A THR 349 ? A THR 293 11 1 Y 1 A SER 350 ? A SER 294 12 1 Y 1 A GLN 351 ? A GLN 295 13 1 Y 1 A VAL 352 ? A VAL 296 14 1 Y 1 A ALA 353 ? A ALA 297 15 1 Y 1 A PRO 354 ? A PRO 298 16 1 Y 1 A ALA 355 ? A ALA 299 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CIT C1 C N N 74 CIT O1 O N N 75 CIT O2 O N N 76 CIT C2 C N N 77 CIT C3 C N N 78 CIT O7 O N N 79 CIT C4 C N N 80 CIT C5 C N N 81 CIT O3 O N N 82 CIT O4 O N N 83 CIT C6 C N N 84 CIT O5 O N N 85 CIT O6 O N N 86 CIT HO2 H N N 87 CIT H21 H N N 88 CIT H22 H N N 89 CIT HO7 H N N 90 CIT H41 H N N 91 CIT H42 H N N 92 CIT HO4 H N N 93 CIT HO6 H N N 94 CYS N N N N 95 CYS CA C N R 96 CYS C C N N 97 CYS O O N N 98 CYS CB C N N 99 CYS SG S N N 100 CYS OXT O N N 101 CYS H H N N 102 CYS H2 H N N 103 CYS HA H N N 104 CYS HB2 H N N 105 CYS HB3 H N N 106 CYS HG H N N 107 CYS HXT H N N 108 GLN N N N N 109 GLN CA C N S 110 GLN C C N N 111 GLN O O N N 112 GLN CB C N N 113 GLN CG C N N 114 GLN CD C N N 115 GLN OE1 O N N 116 GLN NE2 N N N 117 GLN OXT O N N 118 GLN H H N N 119 GLN H2 H N N 120 GLN HA H N N 121 GLN HB2 H N N 122 GLN HB3 H N N 123 GLN HG2 H N N 124 GLN HG3 H N N 125 GLN HE21 H N N 126 GLN HE22 H N N 127 GLN HXT H N N 128 GLU N N N N 129 GLU CA C N S 130 GLU C C N N 131 GLU O O N N 132 GLU CB C N N 133 GLU CG C N N 134 GLU CD C N N 135 GLU OE1 O N N 136 GLU OE2 O N N 137 GLU OXT O N N 138 GLU H H N N 139 GLU H2 H N N 140 GLU HA H N N 141 GLU HB2 H N N 142 GLU HB3 H N N 143 GLU HG2 H N N 144 GLU HG3 H N N 145 GLU HE2 H N N 146 GLU HXT H N N 147 GLY N N N N 148 GLY CA C N N 149 GLY C C N N 150 GLY O O N N 151 GLY OXT O N N 152 GLY H H N N 153 GLY H2 H N N 154 GLY HA2 H N N 155 GLY HA3 H N N 156 GLY HXT H N N 157 HIS N N N N 158 HIS CA C N S 159 HIS C C N N 160 HIS O O N N 161 HIS CB C N N 162 HIS CG C Y N 163 HIS ND1 N Y N 164 HIS CD2 C Y N 165 HIS CE1 C Y N 166 HIS NE2 N Y N 167 HIS OXT O N N 168 HIS H H N N 169 HIS H2 H N N 170 HIS HA H N N 171 HIS HB2 H N N 172 HIS HB3 H N N 173 HIS HD1 H N N 174 HIS HD2 H N N 175 HIS HE1 H N N 176 HIS HE2 H N N 177 HIS HXT H N N 178 HOH O O N N 179 HOH H1 H N N 180 HOH H2 H N N 181 ILE N N N N 182 ILE CA C N S 183 ILE C C N N 184 ILE O O N N 185 ILE CB C N S 186 ILE CG1 C N N 187 ILE CG2 C N N 188 ILE CD1 C N N 189 ILE OXT O N N 190 ILE H H N N 191 ILE H2 H N N 192 ILE HA H N N 193 ILE HB H N N 194 ILE HG12 H N N 195 ILE HG13 H N N 196 ILE HG21 H N N 197 ILE HG22 H N N 198 ILE HG23 H N N 199 ILE HD11 H N N 200 ILE HD12 H N N 201 ILE HD13 H N N 202 ILE HXT H N N 203 LEU N N N N 204 LEU CA C N S 205 LEU C C N N 206 LEU O O N N 207 LEU CB C N N 208 LEU CG C N N 209 LEU CD1 C N N 210 LEU CD2 C N N 211 LEU OXT O N N 212 LEU H H N N 213 LEU H2 H N N 214 LEU HA H N N 215 LEU HB2 H N N 216 LEU HB3 H N N 217 LEU HG H N N 218 LEU HD11 H N N 219 LEU HD12 H N N 220 LEU HD13 H N N 221 LEU HD21 H N N 222 LEU HD22 H N N 223 LEU HD23 H N N 224 LEU HXT H N N 225 LYS N N N N 226 LYS CA C N S 227 LYS C C N N 228 LYS O O N N 229 LYS CB C N N 230 LYS CG C N N 231 LYS CD C N N 232 LYS CE C N N 233 LYS NZ N N N 234 LYS OXT O N N 235 LYS H H N N 236 LYS H2 H N N 237 LYS HA H N N 238 LYS HB2 H N N 239 LYS HB3 H N N 240 LYS HG2 H N N 241 LYS HG3 H N N 242 LYS HD2 H N N 243 LYS HD3 H N N 244 LYS HE2 H N N 245 LYS HE3 H N N 246 LYS HZ1 H N N 247 LYS HZ2 H N N 248 LYS HZ3 H N N 249 LYS HXT H N N 250 MET N N N N 251 MET CA C N S 252 MET C C N N 253 MET O O N N 254 MET CB C N N 255 MET CG C N N 256 MET SD S N N 257 MET CE C N N 258 MET OXT O N N 259 MET H H N N 260 MET H2 H N N 261 MET HA H N N 262 MET HB2 H N N 263 MET HB3 H N N 264 MET HG2 H N N 265 MET HG3 H N N 266 MET HE1 H N N 267 MET HE2 H N N 268 MET HE3 H N N 269 MET HXT H N N 270 NAG C1 C N R 271 NAG C2 C N R 272 NAG C3 C N R 273 NAG C4 C N S 274 NAG C5 C N R 275 NAG C6 C N N 276 NAG C7 C N N 277 NAG C8 C N N 278 NAG N2 N N N 279 NAG O1 O N N 280 NAG O3 O N N 281 NAG O4 O N N 282 NAG O5 O N N 283 NAG O6 O N N 284 NAG O7 O N N 285 NAG H1 H N N 286 NAG H2 H N N 287 NAG H3 H N N 288 NAG H4 H N N 289 NAG H5 H N N 290 NAG H61 H N N 291 NAG H62 H N N 292 NAG H81 H N N 293 NAG H82 H N N 294 NAG H83 H N N 295 NAG HN2 H N N 296 NAG HO1 H N N 297 NAG HO3 H N N 298 NAG HO4 H N N 299 NAG HO6 H N N 300 PEG C1 C N N 301 PEG O1 O N N 302 PEG C2 C N N 303 PEG O2 O N N 304 PEG C3 C N N 305 PEG C4 C N N 306 PEG O4 O N N 307 PEG H11 H N N 308 PEG H12 H N N 309 PEG HO1 H N N 310 PEG H21 H N N 311 PEG H22 H N N 312 PEG H31 H N N 313 PEG H32 H N N 314 PEG H41 H N N 315 PEG H42 H N N 316 PEG HO4 H N N 317 PHE N N N N 318 PHE CA C N S 319 PHE C C N N 320 PHE O O N N 321 PHE CB C N N 322 PHE CG C Y N 323 PHE CD1 C Y N 324 PHE CD2 C Y N 325 PHE CE1 C Y N 326 PHE CE2 C Y N 327 PHE CZ C Y N 328 PHE OXT O N N 329 PHE H H N N 330 PHE H2 H N N 331 PHE HA H N N 332 PHE HB2 H N N 333 PHE HB3 H N N 334 PHE HD1 H N N 335 PHE HD2 H N N 336 PHE HE1 H N N 337 PHE HE2 H N N 338 PHE HZ H N N 339 PHE HXT H N N 340 PRO N N N N 341 PRO CA C N S 342 PRO C C N N 343 PRO O O N N 344 PRO CB C N N 345 PRO CG C N N 346 PRO CD C N N 347 PRO OXT O N N 348 PRO H H N N 349 PRO HA H N N 350 PRO HB2 H N N 351 PRO HB3 H N N 352 PRO HG2 H N N 353 PRO HG3 H N N 354 PRO HD2 H N N 355 PRO HD3 H N N 356 PRO HXT H N N 357 SER N N N N 358 SER CA C N S 359 SER C C N N 360 SER O O N N 361 SER CB C N N 362 SER OG O N N 363 SER OXT O N N 364 SER H H N N 365 SER H2 H N N 366 SER HA H N N 367 SER HB2 H N N 368 SER HB3 H N N 369 SER HG H N N 370 SER HXT H N N 371 THR N N N N 372 THR CA C N S 373 THR C C N N 374 THR O O N N 375 THR CB C N R 376 THR OG1 O N N 377 THR CG2 C N N 378 THR OXT O N N 379 THR H H N N 380 THR H2 H N N 381 THR HA H N N 382 THR HB H N N 383 THR HG1 H N N 384 THR HG21 H N N 385 THR HG22 H N N 386 THR HG23 H N N 387 THR HXT H N N 388 TRP N N N N 389 TRP CA C N S 390 TRP C C N N 391 TRP O O N N 392 TRP CB C N N 393 TRP CG C Y N 394 TRP CD1 C Y N 395 TRP CD2 C Y N 396 TRP NE1 N Y N 397 TRP CE2 C Y N 398 TRP CE3 C Y N 399 TRP CZ2 C Y N 400 TRP CZ3 C Y N 401 TRP CH2 C Y N 402 TRP OXT O N N 403 TRP H H N N 404 TRP H2 H N N 405 TRP HA H N N 406 TRP HB2 H N N 407 TRP HB3 H N N 408 TRP HD1 H N N 409 TRP HE1 H N N 410 TRP HE3 H N N 411 TRP HZ2 H N N 412 TRP HZ3 H N N 413 TRP HH2 H N N 414 TRP HXT H N N 415 TYR N N N N 416 TYR CA C N S 417 TYR C C N N 418 TYR O O N N 419 TYR CB C N N 420 TYR CG C Y N 421 TYR CD1 C Y N 422 TYR CD2 C Y N 423 TYR CE1 C Y N 424 TYR CE2 C Y N 425 TYR CZ C Y N 426 TYR OH O N N 427 TYR OXT O N N 428 TYR H H N N 429 TYR H2 H N N 430 TYR HA H N N 431 TYR HB2 H N N 432 TYR HB3 H N N 433 TYR HD1 H N N 434 TYR HD2 H N N 435 TYR HE1 H N N 436 TYR HE2 H N N 437 TYR HH H N N 438 TYR HXT H N N 439 VAL N N N N 440 VAL CA C N S 441 VAL C C N N 442 VAL O O N N 443 VAL CB C N N 444 VAL CG1 C N N 445 VAL CG2 C N N 446 VAL OXT O N N 447 VAL H H N N 448 VAL H2 H N N 449 VAL HA H N N 450 VAL HB H N N 451 VAL HG11 H N N 452 VAL HG12 H N N 453 VAL HG13 H N N 454 VAL HG21 H N N 455 VAL HG22 H N N 456 VAL HG23 H N N 457 VAL HXT H N N 458 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CIT C1 O1 doub N N 70 CIT C1 O2 sing N N 71 CIT C1 C2 sing N N 72 CIT O2 HO2 sing N N 73 CIT C2 C3 sing N N 74 CIT C2 H21 sing N N 75 CIT C2 H22 sing N N 76 CIT C3 O7 sing N N 77 CIT C3 C4 sing N N 78 CIT C3 C6 sing N N 79 CIT O7 HO7 sing N N 80 CIT C4 C5 sing N N 81 CIT C4 H41 sing N N 82 CIT C4 H42 sing N N 83 CIT C5 O3 doub N N 84 CIT C5 O4 sing N N 85 CIT O4 HO4 sing N N 86 CIT C6 O5 doub N N 87 CIT C6 O6 sing N N 88 CIT O6 HO6 sing N N 89 CYS N CA sing N N 90 CYS N H sing N N 91 CYS N H2 sing N N 92 CYS CA C sing N N 93 CYS CA CB sing N N 94 CYS CA HA sing N N 95 CYS C O doub N N 96 CYS C OXT sing N N 97 CYS CB SG sing N N 98 CYS CB HB2 sing N N 99 CYS CB HB3 sing N N 100 CYS SG HG sing N N 101 CYS OXT HXT sing N N 102 GLN N CA sing N N 103 GLN N H sing N N 104 GLN N H2 sing N N 105 GLN CA C sing N N 106 GLN CA CB sing N N 107 GLN CA HA sing N N 108 GLN C O doub N N 109 GLN C OXT sing N N 110 GLN CB CG sing N N 111 GLN CB HB2 sing N N 112 GLN CB HB3 sing N N 113 GLN CG CD sing N N 114 GLN CG HG2 sing N N 115 GLN CG HG3 sing N N 116 GLN CD OE1 doub N N 117 GLN CD NE2 sing N N 118 GLN NE2 HE21 sing N N 119 GLN NE2 HE22 sing N N 120 GLN OXT HXT sing N N 121 GLU N CA sing N N 122 GLU N H sing N N 123 GLU N H2 sing N N 124 GLU CA C sing N N 125 GLU CA CB sing N N 126 GLU CA HA sing N N 127 GLU C O doub N N 128 GLU C OXT sing N N 129 GLU CB CG sing N N 130 GLU CB HB2 sing N N 131 GLU CB HB3 sing N N 132 GLU CG CD sing N N 133 GLU CG HG2 sing N N 134 GLU CG HG3 sing N N 135 GLU CD OE1 doub N N 136 GLU CD OE2 sing N N 137 GLU OE2 HE2 sing N N 138 GLU OXT HXT sing N N 139 GLY N CA sing N N 140 GLY N H sing N N 141 GLY N H2 sing N N 142 GLY CA C sing N N 143 GLY CA HA2 sing N N 144 GLY CA HA3 sing N N 145 GLY C O doub N N 146 GLY C OXT sing N N 147 GLY OXT HXT sing N N 148 HIS N CA sing N N 149 HIS N H sing N N 150 HIS N H2 sing N N 151 HIS CA C sing N N 152 HIS CA CB sing N N 153 HIS CA HA sing N N 154 HIS C O doub N N 155 HIS C OXT sing N N 156 HIS CB CG sing N N 157 HIS CB HB2 sing N N 158 HIS CB HB3 sing N N 159 HIS CG ND1 sing Y N 160 HIS CG CD2 doub Y N 161 HIS ND1 CE1 doub Y N 162 HIS ND1 HD1 sing N N 163 HIS CD2 NE2 sing Y N 164 HIS CD2 HD2 sing N N 165 HIS CE1 NE2 sing Y N 166 HIS CE1 HE1 sing N N 167 HIS NE2 HE2 sing N N 168 HIS OXT HXT sing N N 169 HOH O H1 sing N N 170 HOH O H2 sing N N 171 ILE N CA sing N N 172 ILE N H sing N N 173 ILE N H2 sing N N 174 ILE CA C sing N N 175 ILE CA CB sing N N 176 ILE CA HA sing N N 177 ILE C O doub N N 178 ILE C OXT sing N N 179 ILE CB CG1 sing N N 180 ILE CB CG2 sing N N 181 ILE CB HB sing N N 182 ILE CG1 CD1 sing N N 183 ILE CG1 HG12 sing N N 184 ILE CG1 HG13 sing N N 185 ILE CG2 HG21 sing N N 186 ILE CG2 HG22 sing N N 187 ILE CG2 HG23 sing N N 188 ILE CD1 HD11 sing N N 189 ILE CD1 HD12 sing N N 190 ILE CD1 HD13 sing N N 191 ILE OXT HXT sing N N 192 LEU N CA sing N N 193 LEU N H sing N N 194 LEU N H2 sing N N 195 LEU CA C sing N N 196 LEU CA CB sing N N 197 LEU CA HA sing N N 198 LEU C O doub N N 199 LEU C OXT sing N N 200 LEU CB CG sing N N 201 LEU CB HB2 sing N N 202 LEU CB HB3 sing N N 203 LEU CG CD1 sing N N 204 LEU CG CD2 sing N N 205 LEU CG HG sing N N 206 LEU CD1 HD11 sing N N 207 LEU CD1 HD12 sing N N 208 LEU CD1 HD13 sing N N 209 LEU CD2 HD21 sing N N 210 LEU CD2 HD22 sing N N 211 LEU CD2 HD23 sing N N 212 LEU OXT HXT sing N N 213 LYS N CA sing N N 214 LYS N H sing N N 215 LYS N H2 sing N N 216 LYS CA C sing N N 217 LYS CA CB sing N N 218 LYS CA HA sing N N 219 LYS C O doub N N 220 LYS C OXT sing N N 221 LYS CB CG sing N N 222 LYS CB HB2 sing N N 223 LYS CB HB3 sing N N 224 LYS CG CD sing N N 225 LYS CG HG2 sing N N 226 LYS CG HG3 sing N N 227 LYS CD CE sing N N 228 LYS CD HD2 sing N N 229 LYS CD HD3 sing N N 230 LYS CE NZ sing N N 231 LYS CE HE2 sing N N 232 LYS CE HE3 sing N N 233 LYS NZ HZ1 sing N N 234 LYS NZ HZ2 sing N N 235 LYS NZ HZ3 sing N N 236 LYS OXT HXT sing N N 237 MET N CA sing N N 238 MET N H sing N N 239 MET N H2 sing N N 240 MET CA C sing N N 241 MET CA CB sing N N 242 MET CA HA sing N N 243 MET C O doub N N 244 MET C OXT sing N N 245 MET CB CG sing N N 246 MET CB HB2 sing N N 247 MET CB HB3 sing N N 248 MET CG SD sing N N 249 MET CG HG2 sing N N 250 MET CG HG3 sing N N 251 MET SD CE sing N N 252 MET CE HE1 sing N N 253 MET CE HE2 sing N N 254 MET CE HE3 sing N N 255 MET OXT HXT sing N N 256 NAG C1 C2 sing N N 257 NAG C1 O1 sing N N 258 NAG C1 O5 sing N N 259 NAG C1 H1 sing N N 260 NAG C2 C3 sing N N 261 NAG C2 N2 sing N N 262 NAG C2 H2 sing N N 263 NAG C3 C4 sing N N 264 NAG C3 O3 sing N N 265 NAG C3 H3 sing N N 266 NAG C4 C5 sing N N 267 NAG C4 O4 sing N N 268 NAG C4 H4 sing N N 269 NAG C5 C6 sing N N 270 NAG C5 O5 sing N N 271 NAG C5 H5 sing N N 272 NAG C6 O6 sing N N 273 NAG C6 H61 sing N N 274 NAG C6 H62 sing N N 275 NAG C7 C8 sing N N 276 NAG C7 N2 sing N N 277 NAG C7 O7 doub N N 278 NAG C8 H81 sing N N 279 NAG C8 H82 sing N N 280 NAG C8 H83 sing N N 281 NAG N2 HN2 sing N N 282 NAG O1 HO1 sing N N 283 NAG O3 HO3 sing N N 284 NAG O4 HO4 sing N N 285 NAG O6 HO6 sing N N 286 PEG C1 O1 sing N N 287 PEG C1 C2 sing N N 288 PEG C1 H11 sing N N 289 PEG C1 H12 sing N N 290 PEG O1 HO1 sing N N 291 PEG C2 O2 sing N N 292 PEG C2 H21 sing N N 293 PEG C2 H22 sing N N 294 PEG O2 C3 sing N N 295 PEG C3 C4 sing N N 296 PEG C3 H31 sing N N 297 PEG C3 H32 sing N N 298 PEG C4 O4 sing N N 299 PEG C4 H41 sing N N 300 PEG C4 H42 sing N N 301 PEG O4 HO4 sing N N 302 PHE N CA sing N N 303 PHE N H sing N N 304 PHE N H2 sing N N 305 PHE CA C sing N N 306 PHE CA CB sing N N 307 PHE CA HA sing N N 308 PHE C O doub N N 309 PHE C OXT sing N N 310 PHE CB CG sing N N 311 PHE CB HB2 sing N N 312 PHE CB HB3 sing N N 313 PHE CG CD1 doub Y N 314 PHE CG CD2 sing Y N 315 PHE CD1 CE1 sing Y N 316 PHE CD1 HD1 sing N N 317 PHE CD2 CE2 doub Y N 318 PHE CD2 HD2 sing N N 319 PHE CE1 CZ doub Y N 320 PHE CE1 HE1 sing N N 321 PHE CE2 CZ sing Y N 322 PHE CE2 HE2 sing N N 323 PHE CZ HZ sing N N 324 PHE OXT HXT sing N N 325 PRO N CA sing N N 326 PRO N CD sing N N 327 PRO N H sing N N 328 PRO CA C sing N N 329 PRO CA CB sing N N 330 PRO CA HA sing N N 331 PRO C O doub N N 332 PRO C OXT sing N N 333 PRO CB CG sing N N 334 PRO CB HB2 sing N N 335 PRO CB HB3 sing N N 336 PRO CG CD sing N N 337 PRO CG HG2 sing N N 338 PRO CG HG3 sing N N 339 PRO CD HD2 sing N N 340 PRO CD HD3 sing N N 341 PRO OXT HXT sing N N 342 SER N CA sing N N 343 SER N H sing N N 344 SER N H2 sing N N 345 SER CA C sing N N 346 SER CA CB sing N N 347 SER CA HA sing N N 348 SER C O doub N N 349 SER C OXT sing N N 350 SER CB OG sing N N 351 SER CB HB2 sing N N 352 SER CB HB3 sing N N 353 SER OG HG sing N N 354 SER OXT HXT sing N N 355 THR N CA sing N N 356 THR N H sing N N 357 THR N H2 sing N N 358 THR CA C sing N N 359 THR CA CB sing N N 360 THR CA HA sing N N 361 THR C O doub N N 362 THR C OXT sing N N 363 THR CB OG1 sing N N 364 THR CB CG2 sing N N 365 THR CB HB sing N N 366 THR OG1 HG1 sing N N 367 THR CG2 HG21 sing N N 368 THR CG2 HG22 sing N N 369 THR CG2 HG23 sing N N 370 THR OXT HXT sing N N 371 TRP N CA sing N N 372 TRP N H sing N N 373 TRP N H2 sing N N 374 TRP CA C sing N N 375 TRP CA CB sing N N 376 TRP CA HA sing N N 377 TRP C O doub N N 378 TRP C OXT sing N N 379 TRP CB CG sing N N 380 TRP CB HB2 sing N N 381 TRP CB HB3 sing N N 382 TRP CG CD1 doub Y N 383 TRP CG CD2 sing Y N 384 TRP CD1 NE1 sing Y N 385 TRP CD1 HD1 sing N N 386 TRP CD2 CE2 doub Y N 387 TRP CD2 CE3 sing Y N 388 TRP NE1 CE2 sing Y N 389 TRP NE1 HE1 sing N N 390 TRP CE2 CZ2 sing Y N 391 TRP CE3 CZ3 doub Y N 392 TRP CE3 HE3 sing N N 393 TRP CZ2 CH2 doub Y N 394 TRP CZ2 HZ2 sing N N 395 TRP CZ3 CH2 sing Y N 396 TRP CZ3 HZ3 sing N N 397 TRP CH2 HH2 sing N N 398 TRP OXT HXT sing N N 399 TYR N CA sing N N 400 TYR N H sing N N 401 TYR N H2 sing N N 402 TYR CA C sing N N 403 TYR CA CB sing N N 404 TYR CA HA sing N N 405 TYR C O doub N N 406 TYR C OXT sing N N 407 TYR CB CG sing N N 408 TYR CB HB2 sing N N 409 TYR CB HB3 sing N N 410 TYR CG CD1 doub Y N 411 TYR CG CD2 sing Y N 412 TYR CD1 CE1 sing Y N 413 TYR CD1 HD1 sing N N 414 TYR CD2 CE2 doub Y N 415 TYR CD2 HD2 sing N N 416 TYR CE1 CZ doub Y N 417 TYR CE1 HE1 sing N N 418 TYR CE2 CZ sing Y N 419 TYR CE2 HE2 sing N N 420 TYR CZ OH sing N N 421 TYR OH HH sing N N 422 TYR OXT HXT sing N N 423 VAL N CA sing N N 424 VAL N H sing N N 425 VAL N H2 sing N N 426 VAL CA C sing N N 427 VAL CA CB sing N N 428 VAL CA HA sing N N 429 VAL C O doub N N 430 VAL C OXT sing N N 431 VAL CB CG1 sing N N 432 VAL CB CG2 sing N N 433 VAL CB HB sing N N 434 VAL CG1 HG11 sing N N 435 VAL CG1 HG12 sing N N 436 VAL CG1 HG13 sing N N 437 VAL CG2 HG21 sing N N 438 VAL CG2 HG22 sing N N 439 VAL CG2 HG23 sing N N 440 VAL OXT HXT sing N N 441 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 NAG 1 B NAG 1 A NAG 1345 n B 2 NAG 2 B NAG 2 A NAG 1350 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DGlcpNAcb1-4DGlcpNAcb1- 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/1,2,1/[a2122h-1b_1-5_2*NCC/3=O]/1-1/a4-b1' WURCS PDB2Glycan 1.1.0 3 2 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}}}' LINUCS PDB-CARE ? # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.comp_id_1 NAG _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_2 NAG _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.value_order sing _pdbx_entity_branch_link.details ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 NAG 1 n 2 NAG 2 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 4 'DI(HYDROXYETHYL)ETHER' PEG 5 'CITRIC ACID' CIT 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3ZYJ _pdbx_initial_refinement_model.details 'PDB ENTRY 3ZYJ' #