data_4DE7 # _entry.id 4DE7 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4DE7 pdb_00004de7 10.2210/pdb4de7/pdb RCSB RCSB070217 ? ? WWPDB D_1000070217 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-06-06 2 'Structure model' 1 1 2012-06-13 3 'Structure model' 1 2 2013-01-09 4 'Structure model' 1 3 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' struct_ref_seq_dif 5 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_ref_seq_dif.details' 4 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4DE7 _pdbx_database_status.recvd_initial_deposition_date 2012-01-20 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4DDZ . unspecified PDB 4DEC . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Albesa-Jove, D.' 1 'Urresti, S.' 2 'van der Woerd, M.' 3 'Guerin, M.E.' 4 # _citation.id primary _citation.title 'Mechanistic insights into the retaining glucosyl-3-phosphoglycerate synthase from mycobacteria.' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 287 _citation.page_first 24649 _citation.page_last 24661 _citation.year 2012 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22637481 _citation.pdbx_database_id_DOI 10.1074/jbc.M112.368191 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Urresti, S.' 1 ? primary 'Albesa-Jove, D.' 2 ? primary 'Schaeffer, F.' 3 ? primary 'Pham, H.T.' 4 ? primary 'Kaur, D.' 5 ? primary 'Gest, P.' 6 ? primary 'van der Woerd, M.J.' 7 ? primary 'Carreras-Gonzalez, A.' 8 ? primary 'Lopez-Fernandez, S.' 9 ? primary 'Alzari, P.M.' 10 ? primary 'Brennan, P.J.' 11 ? primary 'Jackson, M.' 12 ? primary 'Guerin, M.E.' 13 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'GLUCOSYL-3-PHOSPHOGLYCERATE SYNTHASE (GpgS)' 36582.656 1 2.4.1.- ? ? ? 2 non-polymer syn "URIDINE-5'-DIPHOSPHATE" 404.161 1 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 2 ? ? ? ? 4 water nat water 18.015 22 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MGSSHHHHHHSSGLVPRGSHMTASELVAGDLAGGRAPGALPLDTTWHRPGWTIGELEAAKAGRTISVVLPALNEEATIES VIDSISPLVDGLVDELIVLDSGSTDDTEIRAIASGARVVSREQALPEVPVRPGKGEALWRSLAATSGDIVVFIDSDLINP HPLFVPWLVGPLLTGEGIQLVKSFYRRPLQVSDVTSGVCATGGGRVTELVARPLLAALRPELGCVLQPLSGEYAASRELL TSLPFAPGYGVEIGLLIDTFDRLGLDAIAQVNLGVRAHRNRPLDELGAMSRQVIATLLSRCGIPDSGVGLTQFLPGGPDD SDYTRHTWPVSLVDRPPMKVMRPR ; _entity_poly.pdbx_seq_one_letter_code_can ;MGSSHHHHHHSSGLVPRGSHMTASELVAGDLAGGRAPGALPLDTTWHRPGWTIGELEAAKAGRTISVVLPALNEEATIES VIDSISPLVDGLVDELIVLDSGSTDDTEIRAIASGARVVSREQALPEVPVRPGKGEALWRSLAATSGDIVVFIDSDLINP HPLFVPWLVGPLLTGEGIQLVKSFYRRPLQVSDVTSGVCATGGGRVTELVARPLLAALRPELGCVLQPLSGEYAASRELL TSLPFAPGYGVEIGLLIDTFDRLGLDAIAQVNLGVRAHRNRPLDELGAMSRQVIATLLSRCGIPDSGVGLTQFLPGGPDD SDYTRHTWPVSLVDRPPMKVMRPR ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "URIDINE-5'-DIPHOSPHATE" UDP 3 GLYCEROL GOL 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 SER n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 SER n 1 12 SER n 1 13 GLY n 1 14 LEU n 1 15 VAL n 1 16 PRO n 1 17 ARG n 1 18 GLY n 1 19 SER n 1 20 HIS n 1 21 MET n 1 22 THR n 1 23 ALA n 1 24 SER n 1 25 GLU n 1 26 LEU n 1 27 VAL n 1 28 ALA n 1 29 GLY n 1 30 ASP n 1 31 LEU n 1 32 ALA n 1 33 GLY n 1 34 GLY n 1 35 ARG n 1 36 ALA n 1 37 PRO n 1 38 GLY n 1 39 ALA n 1 40 LEU n 1 41 PRO n 1 42 LEU n 1 43 ASP n 1 44 THR n 1 45 THR n 1 46 TRP n 1 47 HIS n 1 48 ARG n 1 49 PRO n 1 50 GLY n 1 51 TRP n 1 52 THR n 1 53 ILE n 1 54 GLY n 1 55 GLU n 1 56 LEU n 1 57 GLU n 1 58 ALA n 1 59 ALA n 1 60 LYS n 1 61 ALA n 1 62 GLY n 1 63 ARG n 1 64 THR n 1 65 ILE n 1 66 SER n 1 67 VAL n 1 68 VAL n 1 69 LEU n 1 70 PRO n 1 71 ALA n 1 72 LEU n 1 73 ASN n 1 74 GLU n 1 75 GLU n 1 76 ALA n 1 77 THR n 1 78 ILE n 1 79 GLU n 1 80 SER n 1 81 VAL n 1 82 ILE n 1 83 ASP n 1 84 SER n 1 85 ILE n 1 86 SER n 1 87 PRO n 1 88 LEU n 1 89 VAL n 1 90 ASP n 1 91 GLY n 1 92 LEU n 1 93 VAL n 1 94 ASP n 1 95 GLU n 1 96 LEU n 1 97 ILE n 1 98 VAL n 1 99 LEU n 1 100 ASP n 1 101 SER n 1 102 GLY n 1 103 SER n 1 104 THR n 1 105 ASP n 1 106 ASP n 1 107 THR n 1 108 GLU n 1 109 ILE n 1 110 ARG n 1 111 ALA n 1 112 ILE n 1 113 ALA n 1 114 SER n 1 115 GLY n 1 116 ALA n 1 117 ARG n 1 118 VAL n 1 119 VAL n 1 120 SER n 1 121 ARG n 1 122 GLU n 1 123 GLN n 1 124 ALA n 1 125 LEU n 1 126 PRO n 1 127 GLU n 1 128 VAL n 1 129 PRO n 1 130 VAL n 1 131 ARG n 1 132 PRO n 1 133 GLY n 1 134 LYS n 1 135 GLY n 1 136 GLU n 1 137 ALA n 1 138 LEU n 1 139 TRP n 1 140 ARG n 1 141 SER n 1 142 LEU n 1 143 ALA n 1 144 ALA n 1 145 THR n 1 146 SER n 1 147 GLY n 1 148 ASP n 1 149 ILE n 1 150 VAL n 1 151 VAL n 1 152 PHE n 1 153 ILE n 1 154 ASP n 1 155 SER n 1 156 ASP n 1 157 LEU n 1 158 ILE n 1 159 ASN n 1 160 PRO n 1 161 HIS n 1 162 PRO n 1 163 LEU n 1 164 PHE n 1 165 VAL n 1 166 PRO n 1 167 TRP n 1 168 LEU n 1 169 VAL n 1 170 GLY n 1 171 PRO n 1 172 LEU n 1 173 LEU n 1 174 THR n 1 175 GLY n 1 176 GLU n 1 177 GLY n 1 178 ILE n 1 179 GLN n 1 180 LEU n 1 181 VAL n 1 182 LYS n 1 183 SER n 1 184 PHE n 1 185 TYR n 1 186 ARG n 1 187 ARG n 1 188 PRO n 1 189 LEU n 1 190 GLN n 1 191 VAL n 1 192 SER n 1 193 ASP n 1 194 VAL n 1 195 THR n 1 196 SER n 1 197 GLY n 1 198 VAL n 1 199 CYS n 1 200 ALA n 1 201 THR n 1 202 GLY n 1 203 GLY n 1 204 GLY n 1 205 ARG n 1 206 VAL n 1 207 THR n 1 208 GLU n 1 209 LEU n 1 210 VAL n 1 211 ALA n 1 212 ARG n 1 213 PRO n 1 214 LEU n 1 215 LEU n 1 216 ALA n 1 217 ALA n 1 218 LEU n 1 219 ARG n 1 220 PRO n 1 221 GLU n 1 222 LEU n 1 223 GLY n 1 224 CYS n 1 225 VAL n 1 226 LEU n 1 227 GLN n 1 228 PRO n 1 229 LEU n 1 230 SER n 1 231 GLY n 1 232 GLU n 1 233 TYR n 1 234 ALA n 1 235 ALA n 1 236 SER n 1 237 ARG n 1 238 GLU n 1 239 LEU n 1 240 LEU n 1 241 THR n 1 242 SER n 1 243 LEU n 1 244 PRO n 1 245 PHE n 1 246 ALA n 1 247 PRO n 1 248 GLY n 1 249 TYR n 1 250 GLY n 1 251 VAL n 1 252 GLU n 1 253 ILE n 1 254 GLY n 1 255 LEU n 1 256 LEU n 1 257 ILE n 1 258 ASP n 1 259 THR n 1 260 PHE n 1 261 ASP n 1 262 ARG n 1 263 LEU n 1 264 GLY n 1 265 LEU n 1 266 ASP n 1 267 ALA n 1 268 ILE n 1 269 ALA n 1 270 GLN n 1 271 VAL n 1 272 ASN n 1 273 LEU n 1 274 GLY n 1 275 VAL n 1 276 ARG n 1 277 ALA n 1 278 HIS n 1 279 ARG n 1 280 ASN n 1 281 ARG n 1 282 PRO n 1 283 LEU n 1 284 ASP n 1 285 GLU n 1 286 LEU n 1 287 GLY n 1 288 ALA n 1 289 MET n 1 290 SER n 1 291 ARG n 1 292 GLN n 1 293 VAL n 1 294 ILE n 1 295 ALA n 1 296 THR n 1 297 LEU n 1 298 LEU n 1 299 SER n 1 300 ARG n 1 301 CYS n 1 302 GLY n 1 303 ILE n 1 304 PRO n 1 305 ASP n 1 306 SER n 1 307 GLY n 1 308 VAL n 1 309 GLY n 1 310 LEU n 1 311 THR n 1 312 GLN n 1 313 PHE n 1 314 LEU n 1 315 PRO n 1 316 GLY n 1 317 GLY n 1 318 PRO n 1 319 ASP n 1 320 ASP n 1 321 SER n 1 322 ASP n 1 323 TYR n 1 324 THR n 1 325 ARG n 1 326 HIS n 1 327 THR n 1 328 TRP n 1 329 PRO n 1 330 VAL n 1 331 SER n 1 332 LEU n 1 333 VAL n 1 334 ASP n 1 335 ARG n 1 336 PRO n 1 337 PRO n 1 338 MET n 1 339 LYS n 1 340 VAL n 1 341 MET n 1 342 ARG n 1 343 PRO n 1 344 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'gpgS, MT1246, Rv1208' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain H37Rv _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mycobacterium tuberculosis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 83332 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)pLysS' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28a-gpgS _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 UDP 'RNA linking' . "URIDINE-5'-DIPHOSPHATE" ? 'C9 H14 N2 O12 P2' 404.161 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -19 ? ? ? A . n A 1 2 GLY 2 -18 ? ? ? A . n A 1 3 SER 3 -17 ? ? ? A . n A 1 4 SER 4 -16 ? ? ? A . n A 1 5 HIS 5 -15 ? ? ? A . n A 1 6 HIS 6 -14 ? ? ? A . n A 1 7 HIS 7 -13 ? ? ? A . n A 1 8 HIS 8 -12 ? ? ? A . n A 1 9 HIS 9 -11 ? ? ? A . n A 1 10 HIS 10 -10 ? ? ? A . n A 1 11 SER 11 -9 ? ? ? A . n A 1 12 SER 12 -8 ? ? ? A . n A 1 13 GLY 13 -7 ? ? ? A . n A 1 14 LEU 14 -6 ? ? ? A . n A 1 15 VAL 15 -5 ? ? ? A . n A 1 16 PRO 16 -4 ? ? ? A . n A 1 17 ARG 17 -3 ? ? ? A . n A 1 18 GLY 18 -2 ? ? ? A . n A 1 19 SER 19 -1 ? ? ? A . n A 1 20 HIS 20 0 ? ? ? A . n A 1 21 MET 21 1 ? ? ? A . n A 1 22 THR 22 2 ? ? ? A . n A 1 23 ALA 23 3 ? ? ? A . n A 1 24 SER 24 4 ? ? ? A . n A 1 25 GLU 25 5 ? ? ? A . n A 1 26 LEU 26 6 ? ? ? A . n A 1 27 VAL 27 7 ? ? ? A . n A 1 28 ALA 28 8 ? ? ? A . n A 1 29 GLY 29 9 ? ? ? A . n A 1 30 ASP 30 10 ? ? ? A . n A 1 31 LEU 31 11 ? ? ? A . n A 1 32 ALA 32 12 ? ? ? A . n A 1 33 GLY 33 13 ? ? ? A . n A 1 34 GLY 34 14 ? ? ? A . n A 1 35 ARG 35 15 ? ? ? A . n A 1 36 ALA 36 16 ? ? ? A . n A 1 37 PRO 37 17 ? ? ? A . n A 1 38 GLY 38 18 ? ? ? A . n A 1 39 ALA 39 19 ? ? ? A . n A 1 40 LEU 40 20 ? ? ? A . n A 1 41 PRO 41 21 21 PRO PRO A . n A 1 42 LEU 42 22 22 LEU LEU A . n A 1 43 ASP 43 23 23 ASP ASP A . n A 1 44 THR 44 24 24 THR THR A . n A 1 45 THR 45 25 25 THR THR A . n A 1 46 TRP 46 26 26 TRP TRP A . n A 1 47 HIS 47 27 27 HIS HIS A . n A 1 48 ARG 48 28 28 ARG ARG A . n A 1 49 PRO 49 29 29 PRO PRO A . n A 1 50 GLY 50 30 30 GLY GLY A . n A 1 51 TRP 51 31 31 TRP TRP A . n A 1 52 THR 52 32 32 THR THR A . n A 1 53 ILE 53 33 33 ILE ILE A . n A 1 54 GLY 54 34 34 GLY GLY A . n A 1 55 GLU 55 35 35 GLU GLU A . n A 1 56 LEU 56 36 36 LEU LEU A . n A 1 57 GLU 57 37 37 GLU GLU A . n A 1 58 ALA 58 38 38 ALA ALA A . n A 1 59 ALA 59 39 39 ALA ALA A . n A 1 60 LYS 60 40 40 LYS LYS A . n A 1 61 ALA 61 41 41 ALA ALA A . n A 1 62 GLY 62 42 42 GLY GLY A . n A 1 63 ARG 63 43 43 ARG ARG A . n A 1 64 THR 64 44 44 THR THR A . n A 1 65 ILE 65 45 45 ILE ILE A . n A 1 66 SER 66 46 46 SER SER A . n A 1 67 VAL 67 47 47 VAL VAL A . n A 1 68 VAL 68 48 48 VAL VAL A . n A 1 69 LEU 69 49 49 LEU LEU A . n A 1 70 PRO 70 50 50 PRO PRO A . n A 1 71 ALA 71 51 51 ALA ALA A . n A 1 72 LEU 72 52 52 LEU LEU A . n A 1 73 ASN 73 53 53 ASN ASN A . n A 1 74 GLU 74 54 54 GLU GLU A . n A 1 75 GLU 75 55 55 GLU GLU A . n A 1 76 ALA 76 56 56 ALA ALA A . n A 1 77 THR 77 57 57 THR THR A . n A 1 78 ILE 78 58 58 ILE ILE A . n A 1 79 GLU 79 59 59 GLU GLU A . n A 1 80 SER 80 60 60 SER SER A . n A 1 81 VAL 81 61 61 VAL VAL A . n A 1 82 ILE 82 62 62 ILE ILE A . n A 1 83 ASP 83 63 63 ASP ASP A . n A 1 84 SER 84 64 64 SER SER A . n A 1 85 ILE 85 65 65 ILE ILE A . n A 1 86 SER 86 66 66 SER SER A . n A 1 87 PRO 87 67 67 PRO PRO A . n A 1 88 LEU 88 68 68 LEU LEU A . n A 1 89 VAL 89 69 69 VAL VAL A . n A 1 90 ASP 90 70 70 ASP ASP A . n A 1 91 GLY 91 71 71 GLY GLY A . n A 1 92 LEU 92 72 72 LEU LEU A . n A 1 93 VAL 93 73 73 VAL VAL A . n A 1 94 ASP 94 74 74 ASP ASP A . n A 1 95 GLU 95 75 75 GLU GLU A . n A 1 96 LEU 96 76 76 LEU LEU A . n A 1 97 ILE 97 77 77 ILE ILE A . n A 1 98 VAL 98 78 78 VAL VAL A . n A 1 99 LEU 99 79 79 LEU LEU A . n A 1 100 ASP 100 80 80 ASP ASP A . n A 1 101 SER 101 81 81 SER SER A . n A 1 102 GLY 102 82 82 GLY GLY A . n A 1 103 SER 103 83 83 SER SER A . n A 1 104 THR 104 84 84 THR THR A . n A 1 105 ASP 105 85 85 ASP ASP A . n A 1 106 ASP 106 86 86 ASP ASP A . n A 1 107 THR 107 87 87 THR THR A . n A 1 108 GLU 108 88 88 GLU GLU A . n A 1 109 ILE 109 89 89 ILE ILE A . n A 1 110 ARG 110 90 90 ARG ARG A . n A 1 111 ALA 111 91 91 ALA ALA A . n A 1 112 ILE 112 92 92 ILE ILE A . n A 1 113 ALA 113 93 93 ALA ALA A . n A 1 114 SER 114 94 94 SER SER A . n A 1 115 GLY 115 95 95 GLY GLY A . n A 1 116 ALA 116 96 96 ALA ALA A . n A 1 117 ARG 117 97 97 ARG ARG A . n A 1 118 VAL 118 98 98 VAL VAL A . n A 1 119 VAL 119 99 99 VAL VAL A . n A 1 120 SER 120 100 100 SER SER A . n A 1 121 ARG 121 101 101 ARG ARG A . n A 1 122 GLU 122 102 102 GLU GLU A . n A 1 123 GLN 123 103 103 GLN GLN A . n A 1 124 ALA 124 104 104 ALA ALA A . n A 1 125 LEU 125 105 105 LEU LEU A . n A 1 126 PRO 126 106 106 PRO PRO A . n A 1 127 GLU 127 107 107 GLU GLU A . n A 1 128 VAL 128 108 108 VAL VAL A . n A 1 129 PRO 129 109 109 PRO PRO A . n A 1 130 VAL 130 110 110 VAL VAL A . n A 1 131 ARG 131 111 111 ARG ARG A . n A 1 132 PRO 132 112 112 PRO PRO A . n A 1 133 GLY 133 113 113 GLY GLY A . n A 1 134 LYS 134 114 114 LYS LYS A . n A 1 135 GLY 135 115 115 GLY GLY A . n A 1 136 GLU 136 116 116 GLU GLU A . n A 1 137 ALA 137 117 117 ALA ALA A . n A 1 138 LEU 138 118 118 LEU LEU A . n A 1 139 TRP 139 119 119 TRP TRP A . n A 1 140 ARG 140 120 120 ARG ARG A . n A 1 141 SER 141 121 121 SER SER A . n A 1 142 LEU 142 122 122 LEU LEU A . n A 1 143 ALA 143 123 123 ALA ALA A . n A 1 144 ALA 144 124 124 ALA ALA A . n A 1 145 THR 145 125 125 THR THR A . n A 1 146 SER 146 126 126 SER SER A . n A 1 147 GLY 147 127 127 GLY GLY A . n A 1 148 ASP 148 128 128 ASP ASP A . n A 1 149 ILE 149 129 129 ILE ILE A . n A 1 150 VAL 150 130 130 VAL VAL A . n A 1 151 VAL 151 131 131 VAL VAL A . n A 1 152 PHE 152 132 132 PHE PHE A . n A 1 153 ILE 153 133 133 ILE ILE A . n A 1 154 ASP 154 134 134 ASP ASP A . n A 1 155 SER 155 135 135 SER SER A . n A 1 156 ASP 156 136 136 ASP ASP A . n A 1 157 LEU 157 137 137 LEU LEU A . n A 1 158 ILE 158 138 138 ILE ILE A . n A 1 159 ASN 159 139 139 ASN ASN A . n A 1 160 PRO 160 140 140 PRO PRO A . n A 1 161 HIS 161 141 141 HIS HIS A . n A 1 162 PRO 162 142 142 PRO PRO A . n A 1 163 LEU 163 143 143 LEU LEU A . n A 1 164 PHE 164 144 144 PHE PHE A . n A 1 165 VAL 165 145 145 VAL VAL A . n A 1 166 PRO 166 146 146 PRO PRO A . n A 1 167 TRP 167 147 147 TRP TRP A . n A 1 168 LEU 168 148 148 LEU LEU A . n A 1 169 VAL 169 149 149 VAL VAL A . n A 1 170 GLY 170 150 150 GLY GLY A . n A 1 171 PRO 171 151 151 PRO PRO A . n A 1 172 LEU 172 152 152 LEU LEU A . n A 1 173 LEU 173 153 153 LEU LEU A . n A 1 174 THR 174 154 154 THR THR A . n A 1 175 GLY 175 155 155 GLY GLY A . n A 1 176 GLU 176 156 156 GLU GLU A . n A 1 177 GLY 177 157 157 GLY GLY A . n A 1 178 ILE 178 158 158 ILE ILE A . n A 1 179 GLN 179 159 159 GLN GLN A . n A 1 180 LEU 180 160 160 LEU LEU A . n A 1 181 VAL 181 161 161 VAL VAL A . n A 1 182 LYS 182 162 162 LYS LYS A . n A 1 183 SER 183 163 163 SER SER A . n A 1 184 PHE 184 164 164 PHE PHE A . n A 1 185 TYR 185 165 165 TYR TYR A . n A 1 186 ARG 186 166 166 ARG ARG A . n A 1 187 ARG 187 167 ? ? ? A . n A 1 188 PRO 188 168 ? ? ? A . n A 1 189 LEU 189 169 ? ? ? A . n A 1 190 GLN 190 170 ? ? ? A . n A 1 191 VAL 191 171 ? ? ? A . n A 1 192 SER 192 172 ? ? ? A . n A 1 193 ASP 193 173 ? ? ? A . n A 1 194 VAL 194 174 ? ? ? A . n A 1 195 THR 195 175 ? ? ? A . n A 1 196 SER 196 176 ? ? ? A . n A 1 197 GLY 197 177 ? ? ? A . n A 1 198 VAL 198 178 ? ? ? A . n A 1 199 CYS 199 179 ? ? ? A . n A 1 200 ALA 200 180 ? ? ? A . n A 1 201 THR 201 181 ? ? ? A . n A 1 202 GLY 202 182 ? ? ? A . n A 1 203 GLY 203 183 183 GLY GLY A . n A 1 204 GLY 204 184 184 GLY GLY A . n A 1 205 ARG 205 185 185 ARG ARG A . n A 1 206 VAL 206 186 186 VAL VAL A . n A 1 207 THR 207 187 187 THR THR A . n A 1 208 GLU 208 188 188 GLU GLU A . n A 1 209 LEU 209 189 189 LEU LEU A . n A 1 210 VAL 210 190 190 VAL VAL A . n A 1 211 ALA 211 191 191 ALA ALA A . n A 1 212 ARG 212 192 192 ARG ARG A . n A 1 213 PRO 213 193 193 PRO PRO A . n A 1 214 LEU 214 194 194 LEU LEU A . n A 1 215 LEU 215 195 195 LEU LEU A . n A 1 216 ALA 216 196 196 ALA ALA A . n A 1 217 ALA 217 197 197 ALA ALA A . n A 1 218 LEU 218 198 198 LEU LEU A . n A 1 219 ARG 219 199 199 ARG ARG A . n A 1 220 PRO 220 200 200 PRO PRO A . n A 1 221 GLU 221 201 201 GLU GLU A . n A 1 222 LEU 222 202 202 LEU LEU A . n A 1 223 GLY 223 203 203 GLY GLY A . n A 1 224 CYS 224 204 204 CYS CYS A . n A 1 225 VAL 225 205 205 VAL VAL A . n A 1 226 LEU 226 206 206 LEU LEU A . n A 1 227 GLN 227 207 207 GLN GLN A . n A 1 228 PRO 228 208 208 PRO PRO A . n A 1 229 LEU 229 209 209 LEU LEU A . n A 1 230 SER 230 210 210 SER SER A . n A 1 231 GLY 231 211 211 GLY GLY A . n A 1 232 GLU 232 212 212 GLU GLU A . n A 1 233 TYR 233 213 213 TYR TYR A . n A 1 234 ALA 234 214 214 ALA ALA A . n A 1 235 ALA 235 215 215 ALA ALA A . n A 1 236 SER 236 216 216 SER SER A . n A 1 237 ARG 237 217 217 ARG ARG A . n A 1 238 GLU 238 218 218 GLU GLU A . n A 1 239 LEU 239 219 219 LEU LEU A . n A 1 240 LEU 240 220 220 LEU LEU A . n A 1 241 THR 241 221 221 THR THR A . n A 1 242 SER 242 222 222 SER SER A . n A 1 243 LEU 243 223 223 LEU LEU A . n A 1 244 PRO 244 224 224 PRO PRO A . n A 1 245 PHE 245 225 225 PHE PHE A . n A 1 246 ALA 246 226 226 ALA ALA A . n A 1 247 PRO 247 227 227 PRO PRO A . n A 1 248 GLY 248 228 228 GLY GLY A . n A 1 249 TYR 249 229 229 TYR TYR A . n A 1 250 GLY 250 230 230 GLY GLY A . n A 1 251 VAL 251 231 231 VAL VAL A . n A 1 252 GLU 252 232 232 GLU GLU A . n A 1 253 ILE 253 233 233 ILE ILE A . n A 1 254 GLY 254 234 234 GLY GLY A . n A 1 255 LEU 255 235 235 LEU LEU A . n A 1 256 LEU 256 236 236 LEU LEU A . n A 1 257 ILE 257 237 237 ILE ILE A . n A 1 258 ASP 258 238 238 ASP ASP A . n A 1 259 THR 259 239 239 THR THR A . n A 1 260 PHE 260 240 240 PHE PHE A . n A 1 261 ASP 261 241 241 ASP ASP A . n A 1 262 ARG 262 242 242 ARG ARG A . n A 1 263 LEU 263 243 243 LEU LEU A . n A 1 264 GLY 264 244 244 GLY GLY A . n A 1 265 LEU 265 245 245 LEU LEU A . n A 1 266 ASP 266 246 246 ASP ASP A . n A 1 267 ALA 267 247 247 ALA ALA A . n A 1 268 ILE 268 248 248 ILE ILE A . n A 1 269 ALA 269 249 249 ALA ALA A . n A 1 270 GLN 270 250 250 GLN GLN A . n A 1 271 VAL 271 251 251 VAL VAL A . n A 1 272 ASN 272 252 252 ASN ASN A . n A 1 273 LEU 273 253 253 LEU LEU A . n A 1 274 GLY 274 254 254 GLY GLY A . n A 1 275 VAL 275 255 255 VAL VAL A . n A 1 276 ARG 276 256 256 ARG ARG A . n A 1 277 ALA 277 257 257 ALA ALA A . n A 1 278 HIS 278 258 258 HIS HIS A . n A 1 279 ARG 279 259 259 ARG ARG A . n A 1 280 ASN 280 260 260 ASN ASN A . n A 1 281 ARG 281 261 261 ARG ARG A . n A 1 282 PRO 282 262 262 PRO PRO A . n A 1 283 LEU 283 263 263 LEU LEU A . n A 1 284 ASP 284 264 264 ASP ASP A . n A 1 285 GLU 285 265 265 GLU GLU A . n A 1 286 LEU 286 266 266 LEU LEU A . n A 1 287 GLY 287 267 267 GLY GLY A . n A 1 288 ALA 288 268 268 ALA ALA A . n A 1 289 MET 289 269 269 MET MET A . n A 1 290 SER 290 270 270 SER SER A . n A 1 291 ARG 291 271 271 ARG ARG A . n A 1 292 GLN 292 272 272 GLN GLN A . n A 1 293 VAL 293 273 273 VAL VAL A . n A 1 294 ILE 294 274 274 ILE ILE A . n A 1 295 ALA 295 275 275 ALA ALA A . n A 1 296 THR 296 276 276 THR THR A . n A 1 297 LEU 297 277 277 LEU LEU A . n A 1 298 LEU 298 278 278 LEU LEU A . n A 1 299 SER 299 279 279 SER SER A . n A 1 300 ARG 300 280 280 ARG ARG A . n A 1 301 CYS 301 281 281 CYS CYS A . n A 1 302 GLY 302 282 282 GLY GLY A . n A 1 303 ILE 303 283 283 ILE ILE A . n A 1 304 PRO 304 284 284 PRO PRO A . n A 1 305 ASP 305 285 285 ASP ASP A . n A 1 306 SER 306 286 286 SER SER A . n A 1 307 GLY 307 287 287 GLY GLY A . n A 1 308 VAL 308 288 288 VAL VAL A . n A 1 309 GLY 309 289 289 GLY GLY A . n A 1 310 LEU 310 290 290 LEU LEU A . n A 1 311 THR 311 291 291 THR THR A . n A 1 312 GLN 312 292 292 GLN GLN A . n A 1 313 PHE 313 293 293 PHE PHE A . n A 1 314 LEU 314 294 294 LEU LEU A . n A 1 315 PRO 315 295 295 PRO PRO A . n A 1 316 GLY 316 296 296 GLY GLY A . n A 1 317 GLY 317 297 ? ? ? A . n A 1 318 PRO 318 298 ? ? ? A . n A 1 319 ASP 319 299 ? ? ? A . n A 1 320 ASP 320 300 ? ? ? A . n A 1 321 SER 321 301 ? ? ? A . n A 1 322 ASP 322 302 302 ASP ASP A . n A 1 323 TYR 323 303 303 TYR TYR A . n A 1 324 THR 324 304 304 THR THR A . n A 1 325 ARG 325 305 305 ARG ARG A . n A 1 326 HIS 326 306 306 HIS HIS A . n A 1 327 THR 327 307 307 THR THR A . n A 1 328 TRP 328 308 308 TRP TRP A . n A 1 329 PRO 329 309 309 PRO PRO A . n A 1 330 VAL 330 310 310 VAL VAL A . n A 1 331 SER 331 311 311 SER SER A . n A 1 332 LEU 332 312 312 LEU LEU A . n A 1 333 VAL 333 313 313 VAL VAL A . n A 1 334 ASP 334 314 314 ASP ASP A . n A 1 335 ARG 335 315 315 ARG ARG A . n A 1 336 PRO 336 316 316 PRO PRO A . n A 1 337 PRO 337 317 317 PRO PRO A . n A 1 338 MET 338 318 318 MET MET A . n A 1 339 LYS 339 319 319 LYS LYS A . n A 1 340 VAL 340 320 320 VAL VAL A . n A 1 341 MET 341 321 321 MET MET A . n A 1 342 ARG 342 322 322 ARG ARG A . n A 1 343 PRO 343 323 ? ? ? A . n A 1 344 ARG 344 324 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 UDP 1 401 1 UDP UDP A . C 3 GOL 1 402 2 GOL GOL A . D 3 GOL 1 403 5 GOL GOL A . E 4 HOH 1 501 1 HOH HOH A . E 4 HOH 2 502 2 HOH HOH A . E 4 HOH 3 503 3 HOH HOH A . E 4 HOH 4 504 4 HOH HOH A . E 4 HOH 5 505 5 HOH HOH A . E 4 HOH 6 506 6 HOH HOH A . E 4 HOH 7 507 7 HOH HOH A . E 4 HOH 8 508 8 HOH HOH A . E 4 HOH 9 509 9 HOH HOH A . E 4 HOH 10 510 11 HOH HOH A . E 4 HOH 11 511 12 HOH HOH A . E 4 HOH 12 512 13 HOH HOH A . E 4 HOH 13 513 14 HOH HOH A . E 4 HOH 14 514 16 HOH HOH A . E 4 HOH 15 515 17 HOH HOH A . E 4 HOH 16 516 18 HOH HOH A . E 4 HOH 17 517 19 HOH HOH A . E 4 HOH 18 518 22 HOH HOH A . E 4 HOH 19 519 25 HOH HOH A . E 4 HOH 20 520 26 HOH HOH A . E 4 HOH 21 521 27 HOH HOH A . E 4 HOH 22 522 28 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LEU 22 ? CG ? A LEU 42 CG 2 1 Y 1 A LEU 22 ? CD1 ? A LEU 42 CD1 3 1 Y 1 A LEU 22 ? CD2 ? A LEU 42 CD2 4 1 Y 1 A ARG 28 ? CG ? A ARG 48 CG 5 1 Y 1 A ARG 28 ? CD ? A ARG 48 CD 6 1 Y 1 A ARG 28 ? NE ? A ARG 48 NE 7 1 Y 1 A ARG 28 ? CZ ? A ARG 48 CZ 8 1 Y 1 A ARG 28 ? NH1 ? A ARG 48 NH1 9 1 Y 1 A ARG 28 ? NH2 ? A ARG 48 NH2 10 1 Y 1 A GLU 35 ? CG ? A GLU 55 CG 11 1 Y 1 A GLU 35 ? CD ? A GLU 55 CD 12 1 Y 1 A GLU 35 ? OE1 ? A GLU 55 OE1 13 1 Y 1 A GLU 35 ? OE2 ? A GLU 55 OE2 14 1 Y 0 A GLU 59 ? CA B A GLU 79 CA 15 1 Y 0 A GLU 59 ? CB B A GLU 79 CB 16 1 Y 0 A GLU 59 ? CG B A GLU 79 CG 17 1 Y 0 A GLU 59 ? CD B A GLU 79 CD 18 1 Y 0 A GLU 59 ? OE1 B A GLU 79 OE1 19 1 Y 0 A GLU 59 ? OE2 B A GLU 79 OE2 20 1 Y 1 A ARG 97 ? CZ ? A ARG 117 CZ 21 1 Y 1 A ARG 97 ? NH1 ? A ARG 117 NH1 22 1 Y 1 A ARG 97 ? NH2 ? A ARG 117 NH2 23 1 Y 0 A SER 126 ? CA A A SER 146 CA 24 1 Y 0 A SER 126 ? CB A A SER 146 CB 25 1 Y 0 A SER 126 ? OG A A SER 146 OG 26 1 Y 1 A GLU 156 ? CG ? A GLU 176 CG 27 1 Y 1 A GLU 156 ? CD ? A GLU 176 CD 28 1 Y 1 A GLU 156 ? OE1 ? A GLU 176 OE1 29 1 Y 1 A GLU 156 ? OE2 ? A GLU 176 OE2 30 1 Y 1 A ARG 166 ? CD ? A ARG 186 CD 31 1 Y 1 A ARG 166 ? NE ? A ARG 186 NE 32 1 Y 1 A ARG 166 ? CZ ? A ARG 186 CZ 33 1 Y 1 A ARG 166 ? NH1 ? A ARG 186 NH1 34 1 Y 1 A ARG 166 ? NH2 ? A ARG 186 NH2 35 1 Y 1 A ARG 259 ? CG ? A ARG 279 CG 36 1 Y 1 A ARG 259 ? CD ? A ARG 279 CD 37 1 Y 1 A ARG 259 ? NE ? A ARG 279 NE 38 1 Y 1 A ARG 259 ? CZ ? A ARG 279 CZ 39 1 Y 1 A ARG 259 ? NH1 ? A ARG 279 NH1 40 1 Y 1 A ARG 259 ? NH2 ? A ARG 279 NH2 41 1 Y 1 A GLU 265 ? CG ? A GLU 285 CG 42 1 Y 1 A GLU 265 ? CD ? A GLU 285 CD 43 1 Y 1 A GLU 265 ? OE1 ? A GLU 285 OE1 44 1 Y 1 A GLU 265 ? OE2 ? A GLU 285 OE2 45 1 Y 1 A LEU 294 ? CG ? A LEU 314 CG 46 1 Y 1 A LEU 294 ? CD1 ? A LEU 314 CD1 47 1 Y 1 A LEU 294 ? CD2 ? A LEU 314 CD2 48 1 Y 1 A ASP 302 ? CG ? A ASP 322 CG 49 1 Y 1 A ASP 302 ? OD1 ? A ASP 322 OD1 50 1 Y 1 A ASP 302 ? OD2 ? A ASP 322 OD2 51 1 N 1 A UDP 401 ? "O5'" ? B UDP 1 "O5'" 52 1 N 1 A UDP 401 ? PA ? B UDP 1 PA 53 1 N 1 A UDP 401 ? O1A ? B UDP 1 O1A 54 1 N 1 A UDP 401 ? O2A ? B UDP 1 O2A 55 1 N 1 A UDP 401 ? O3A ? B UDP 1 O3A 56 1 N 1 A UDP 401 ? PB ? B UDP 1 PB 57 1 N 1 A UDP 401 ? O1B ? B UDP 1 O1B 58 1 N 1 A UDP 401 ? O2B ? B UDP 1 O2B 59 1 N 1 A UDP 401 ? O3B ? B UDP 1 O3B # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal Blu-Ice 'data collection' . ? 1 PHASER phasing . ? 2 PHENIX refinement '(phenix.refine: 1.7.2_869)' ? 3 d*TREK 'data reduction' . ? 4 d*TREK 'data scaling' . ? 5 # _cell.entry_id 4DE7 _cell.length_a 98.850 _cell.length_b 98.850 _cell.length_c 127.640 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4DE7 _symmetry.space_group_name_H-M 'I 41' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 80 _symmetry.space_group_name_Hall ? # _exptl.entry_id 4DE7 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 4.26 _exptl_crystal.density_percent_sol 71.14 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8 _exptl_crystal_grow.pdbx_details '1 mM MgCl2, 5mM UDP, 1.5M NaCl, 10%(v/v) ethanol, Tris-HCL pH 8.0, VAPOR DIFFUSION, SITTING DROP, temperature 289K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type NOIR-1 _diffrn_detector.pdbx_collection_date 2008-07-22 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Rosenbaum-Rock Si(111) sagitally focused monochromator' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.00 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 4.2.2' _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 4.2.2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.00 # _reflns.entry_id 4DE7 _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 41.58 _reflns.d_resolution_high 3.00 _reflns.number_obs 12217 _reflns.number_all 12217 _reflns.percent_possible_obs 100 _reflns.pdbx_Rmerge_I_obs 0.107 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 10.3 _reflns.B_iso_Wilson_estimate 68.50 _reflns.pdbx_redundancy 7.22 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 3.00 _reflns_shell.d_res_low 3.11 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs 0.413 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.3 _reflns_shell.pdbx_redundancy 7.08 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1205 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4DE7 _refine.ls_number_reflns_obs 12193 _refine.ls_number_reflns_all 12387 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.46 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 39.077 _refine.ls_d_res_high 3 _refine.ls_percent_reflns_obs 98.43 _refine.ls_R_factor_obs 0.2252 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2242 _refine.ls_R_factor_R_free 0.2447 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.80 _refine.ls_number_reflns_R_free 585 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] 2.4203 _refine.aniso_B[2][2] 2.4203 _refine.aniso_B[3][3] -4.8407 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][3] 0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.345 _refine.solvent_model_param_bsol 38.265 _refine.pdbx_solvent_vdw_probe_radii 1.10 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.86 _refine.pdbx_ls_cross_valid_method ? _refine.details ;AUTHORS STATE THE FOLLOWING ON THE DENSITY ON UDP. THE DENSITY IS VERY LOW, BUT WE DO BELIEVE THE LIGAND IS PRESENT. WE THINK THAT THE LOW OCCUPANCY AND THE PARTIAL DISORDER OF UDP MOLECULE RESULTS IN VERY WEEK ELECTRON DENSITY. BOTH, THE ALPHA- AND BETA-PHOSPHATES OF UDP ARE DISORDERED, AND NO ELECTRON DENSITY IS VISIBLE FOR THEM. WE BELIEVE THE DISORDER OF PHOSPHATE GROUPS IS DUE TO THE ABSENCE OF DIVALENT CATION BOND TO THE STRUCTURE, WHICH USUALLY COORDINATES BETWEEN THE PHOSPHATE GROUPS AND THE ENZYME. COORDINATION OF THE DIVALENT CATION IS PH DEPENDENT, AT PH < 6 THE RESIDUE HIS258 IS FOUND PROTONATED, AND IS UNABLE TO COORDINATE DIVALENT CATIONS. WE BELIEVE THAT IS WHAT HAPPENS IN THIS CASE, RESULTING IN PARTIAL DISORDER OF UDP AND LOW OCCUPANCY. NONETHELESS, WEEK ELECTRON DENSITY IS FOUND FOR THE URIDINE MOIETY, SO WE FELL IT IS STILL INFORMATIVE TO INCLUDE IT IN THE STRUCTURE. ; _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.85 _refine.pdbx_overall_phase_error 23.89 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2090 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 28 _refine_hist.number_atoms_solvent 22 _refine_hist.number_atoms_total 2140 _refine_hist.d_res_high 3 _refine_hist.d_res_low 39.077 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.007 ? ? 2196 ? 'X-RAY DIFFRACTION' f_angle_d 0.975 ? ? 3013 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 12.614 ? ? 807 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.057 ? ? 364 ? 'X-RAY DIFFRACTION' f_plane_restr 0.009 ? ? 385 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 2.9941 3.2953 2771 0.2994 94.00 0.2993 . . 148 . . . . 'X-RAY DIFFRACTION' . 3.2953 3.7718 2908 0.2418 100.00 0.2728 . . 157 . . . . 'X-RAY DIFFRACTION' . 3.7718 4.7507 2955 0.2158 100.00 0.2360 . . 141 . . . . 'X-RAY DIFFRACTION' . 4.7507 39.0801 2974 0.2009 100.00 0.2150 . . 139 . . . . 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 4DE7 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4DE7 _struct.title ;Crystal structure of glucosyl-3-phosphoglycerate synthase from Mycobacterium tuberculosis in complex with Mg2+ and uridine-diphosphate (UDP) ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4DE7 _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text transferase # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code O05309_MYCTU _struct_ref.pdbx_db_accession O05309 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MTASELVAGDLAGGRAPGALPLDTTWHRPGWTIGELEAAKAGRTISVVLPALNEEATIESVIDSISPLVDGLVDELIVLD SGSTDDTEIRAIASGARVVSREQALPEVPVRPGKGEALWRSLAATSGDIVVFIDSDLINPHPLFVPWLVGPLLTGEGIQL VKSFYRRPLQVSDVTSGVCATGGGRVTELVARPLLAALRPELGCVLQPLSGEYAASRELLTSLPFAPGYGVEIGLLIDTF DRLGLDAIAQVNLGVRAHRNRPLDELGAMSRQVIATLLSRCGIPDSGVGLTQFLPGGPDDSDYTRHTWPVSLVDRPPMKV MRPR ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4DE7 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 21 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 344 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O05309 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 324 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 324 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4DE7 MET A 1 ? UNP O05309 ? ? 'expression tag' -19 1 1 4DE7 GLY A 2 ? UNP O05309 ? ? 'expression tag' -18 2 1 4DE7 SER A 3 ? UNP O05309 ? ? 'expression tag' -17 3 1 4DE7 SER A 4 ? UNP O05309 ? ? 'expression tag' -16 4 1 4DE7 HIS A 5 ? UNP O05309 ? ? 'expression tag' -15 5 1 4DE7 HIS A 6 ? UNP O05309 ? ? 'expression tag' -14 6 1 4DE7 HIS A 7 ? UNP O05309 ? ? 'expression tag' -13 7 1 4DE7 HIS A 8 ? UNP O05309 ? ? 'expression tag' -12 8 1 4DE7 HIS A 9 ? UNP O05309 ? ? 'expression tag' -11 9 1 4DE7 HIS A 10 ? UNP O05309 ? ? 'expression tag' -10 10 1 4DE7 SER A 11 ? UNP O05309 ? ? 'expression tag' -9 11 1 4DE7 SER A 12 ? UNP O05309 ? ? 'expression tag' -8 12 1 4DE7 GLY A 13 ? UNP O05309 ? ? 'expression tag' -7 13 1 4DE7 LEU A 14 ? UNP O05309 ? ? 'expression tag' -6 14 1 4DE7 VAL A 15 ? UNP O05309 ? ? 'expression tag' -5 15 1 4DE7 PRO A 16 ? UNP O05309 ? ? 'expression tag' -4 16 1 4DE7 ARG A 17 ? UNP O05309 ? ? 'expression tag' -3 17 1 4DE7 GLY A 18 ? UNP O05309 ? ? 'expression tag' -2 18 1 4DE7 SER A 19 ? UNP O05309 ? ? 'expression tag' -1 19 1 4DE7 HIS A 20 ? UNP O05309 ? ? 'expression tag' 0 20 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5130 ? 1 MORE -20 ? 1 'SSA (A^2)' 20920 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 6_555 -x,-y,z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 52 ? LYS A 60 ? THR A 32 LYS A 40 1 ? 9 HELX_P HELX_P2 2 THR A 77 ? SER A 84 ? THR A 57 SER A 64 1 ? 8 HELX_P HELX_P3 3 ILE A 85 ? VAL A 89 ? ILE A 65 VAL A 69 5 ? 5 HELX_P HELX_P4 4 ASP A 106 ? SER A 114 ? ASP A 86 SER A 94 1 ? 9 HELX_P HELX_P5 5 ARG A 121 ? LEU A 125 ? ARG A 101 LEU A 105 1 ? 5 HELX_P HELX_P6 6 GLY A 133 ? LEU A 142 ? GLY A 113 LEU A 122 1 ? 10 HELX_P HELX_P7 7 ALA A 143 ? THR A 145 ? ALA A 123 THR A 125 5 ? 3 HELX_P HELX_P8 8 LEU A 163 ? GLY A 175 ? LEU A 143 GLY A 155 1 ? 13 HELX_P HELX_P9 9 GLY A 204 ? VAL A 210 ? GLY A 184 VAL A 190 1 ? 7 HELX_P HELX_P10 10 VAL A 210 ? ARG A 219 ? VAL A 190 ARG A 199 1 ? 10 HELX_P HELX_P11 11 PRO A 220 ? VAL A 225 ? PRO A 200 VAL A 205 5 ? 6 HELX_P HELX_P12 12 ARG A 237 ? THR A 241 ? ARG A 217 THR A 221 1 ? 5 HELX_P HELX_P13 13 PRO A 247 ? TYR A 249 ? PRO A 227 TYR A 229 5 ? 3 HELX_P HELX_P14 14 GLY A 250 ? GLY A 264 ? GLY A 230 GLY A 244 1 ? 15 HELX_P HELX_P15 15 PRO A 282 ? CYS A 301 ? PRO A 262 CYS A 281 1 ? 20 HELX_P HELX_P16 16 PRO A 337 ? ARG A 342 ? PRO A 317 ARG A 322 5 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 8 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? parallel A 6 7 ? parallel A 7 8 ? parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 44 ? TRP A 46 ? THR A 24 TRP A 26 A 2 ILE A 268 ? VAL A 275 ? ILE A 248 VAL A 255 A 3 LEU A 180 ? ARG A 186 ? LEU A 160 ARG A 166 A 4 TYR A 233 ? SER A 236 ? TYR A 213 SER A 216 A 5 ILE A 149 ? PHE A 152 ? ILE A 129 PHE A 132 A 6 ILE A 65 ? ALA A 71 ? ILE A 45 ALA A 51 A 7 GLU A 95 ? ASP A 100 ? GLU A 75 ASP A 80 A 8 ARG A 117 ? SER A 120 ? ARG A 97 SER A 100 B 1 THR A 311 ? LEU A 314 ? THR A 291 LEU A 294 B 2 THR A 324 ? THR A 327 ? THR A 304 THR A 307 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TRP A 46 ? N TRP A 26 O ASN A 272 ? O ASN A 252 A 2 3 O LEU A 273 ? O LEU A 253 N PHE A 184 ? N PHE A 164 A 3 4 N VAL A 181 ? N VAL A 161 O ALA A 234 ? O ALA A 214 A 4 5 O ALA A 235 ? O ALA A 215 N VAL A 150 ? N VAL A 130 A 5 6 O VAL A 151 ? O VAL A 131 N VAL A 68 ? N VAL A 48 A 6 7 N VAL A 67 ? N VAL A 47 O ILE A 97 ? O ILE A 77 A 7 8 N VAL A 98 ? N VAL A 78 O VAL A 119 ? O VAL A 99 B 1 2 N LEU A 314 ? N LEU A 294 O THR A 324 ? O THR A 304 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A UDP 401 ? 9 'BINDING SITE FOR RESIDUE UDP A 401' AC2 Software A GOL 402 ? 5 'BINDING SITE FOR RESIDUE GOL A 402' AC3 Software A GOL 403 ? 3 'BINDING SITE FOR RESIDUE GOL A 403' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 9 PRO A 70 ? PRO A 50 . ? 1_555 ? 2 AC1 9 ALA A 71 ? ALA A 51 . ? 1_555 ? 3 AC1 9 LEU A 72 ? LEU A 52 . ? 1_555 ? 4 AC1 9 GLU A 74 ? GLU A 54 . ? 1_555 ? 5 AC1 9 SER A 101 ? SER A 81 . ? 1_555 ? 6 AC1 9 LYS A 134 ? LYS A 114 . ? 1_555 ? 7 AC1 9 SER A 155 ? SER A 135 . ? 1_555 ? 8 AC1 9 ASP A 156 ? ASP A 136 . ? 1_555 ? 9 AC1 9 HOH E . ? HOH A 510 . ? 1_555 ? 10 AC2 5 GLY A 204 ? GLY A 184 . ? 1_555 ? 11 AC2 5 THR A 207 ? THR A 187 . ? 1_555 ? 12 AC2 5 ARG A 276 ? ARG A 256 . ? 1_555 ? 13 AC2 5 HIS A 278 ? HIS A 258 . ? 1_555 ? 14 AC2 5 ASN A 280 ? ASN A 260 . ? 1_555 ? 15 AC3 3 ARG A 117 ? ARG A 97 . ? 1_555 ? 16 AC3 3 VAL A 118 ? VAL A 98 . ? 1_555 ? 17 AC3 3 GLN A 123 ? GLN A 103 . ? 1_555 ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 28 ? ? -169.35 117.11 2 1 ASP A 85 ? ? -97.98 -153.74 3 1 LEU A 105 ? ? -161.98 78.22 4 1 ASN A 139 ? ? 42.03 77.09 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -19 ? A MET 1 2 1 Y 1 A GLY -18 ? A GLY 2 3 1 Y 1 A SER -17 ? A SER 3 4 1 Y 1 A SER -16 ? A SER 4 5 1 Y 1 A HIS -15 ? A HIS 5 6 1 Y 1 A HIS -14 ? A HIS 6 7 1 Y 1 A HIS -13 ? A HIS 7 8 1 Y 1 A HIS -12 ? A HIS 8 9 1 Y 1 A HIS -11 ? A HIS 9 10 1 Y 1 A HIS -10 ? A HIS 10 11 1 Y 1 A SER -9 ? A SER 11 12 1 Y 1 A SER -8 ? A SER 12 13 1 Y 1 A GLY -7 ? A GLY 13 14 1 Y 1 A LEU -6 ? A LEU 14 15 1 Y 1 A VAL -5 ? A VAL 15 16 1 Y 1 A PRO -4 ? A PRO 16 17 1 Y 1 A ARG -3 ? A ARG 17 18 1 Y 1 A GLY -2 ? A GLY 18 19 1 Y 1 A SER -1 ? A SER 19 20 1 Y 1 A HIS 0 ? A HIS 20 21 1 Y 1 A MET 1 ? A MET 21 22 1 Y 1 A THR 2 ? A THR 22 23 1 Y 1 A ALA 3 ? A ALA 23 24 1 Y 1 A SER 4 ? A SER 24 25 1 Y 1 A GLU 5 ? A GLU 25 26 1 Y 1 A LEU 6 ? A LEU 26 27 1 Y 1 A VAL 7 ? A VAL 27 28 1 Y 1 A ALA 8 ? A ALA 28 29 1 Y 1 A GLY 9 ? A GLY 29 30 1 Y 1 A ASP 10 ? A ASP 30 31 1 Y 1 A LEU 11 ? A LEU 31 32 1 Y 1 A ALA 12 ? A ALA 32 33 1 Y 1 A GLY 13 ? A GLY 33 34 1 Y 1 A GLY 14 ? A GLY 34 35 1 Y 1 A ARG 15 ? A ARG 35 36 1 Y 1 A ALA 16 ? A ALA 36 37 1 Y 1 A PRO 17 ? A PRO 37 38 1 Y 1 A GLY 18 ? A GLY 38 39 1 Y 1 A ALA 19 ? A ALA 39 40 1 Y 1 A LEU 20 ? A LEU 40 41 1 Y 1 A ARG 167 ? A ARG 187 42 1 Y 1 A PRO 168 ? A PRO 188 43 1 Y 1 A LEU 169 ? A LEU 189 44 1 Y 1 A GLN 170 ? A GLN 190 45 1 Y 1 A VAL 171 ? A VAL 191 46 1 Y 1 A SER 172 ? A SER 192 47 1 Y 1 A ASP 173 ? A ASP 193 48 1 Y 1 A VAL 174 ? A VAL 194 49 1 Y 1 A THR 175 ? A THR 195 50 1 Y 1 A SER 176 ? A SER 196 51 1 Y 1 A GLY 177 ? A GLY 197 52 1 Y 1 A VAL 178 ? A VAL 198 53 1 Y 1 A CYS 179 ? A CYS 199 54 1 Y 1 A ALA 180 ? A ALA 200 55 1 Y 1 A THR 181 ? A THR 201 56 1 Y 1 A GLY 182 ? A GLY 202 57 1 Y 1 A GLY 297 ? A GLY 317 58 1 Y 1 A PRO 298 ? A PRO 318 59 1 Y 1 A ASP 299 ? A ASP 319 60 1 Y 1 A ASP 300 ? A ASP 320 61 1 Y 1 A SER 301 ? A SER 321 62 1 Y 1 A PRO 323 ? A PRO 343 63 1 Y 1 A ARG 324 ? A ARG 344 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 GOL C1 C N N 137 GOL O1 O N N 138 GOL C2 C N N 139 GOL O2 O N N 140 GOL C3 C N N 141 GOL O3 O N N 142 GOL H11 H N N 143 GOL H12 H N N 144 GOL HO1 H N N 145 GOL H2 H N N 146 GOL HO2 H N N 147 GOL H31 H N N 148 GOL H32 H N N 149 GOL HO3 H N N 150 HIS N N N N 151 HIS CA C N S 152 HIS C C N N 153 HIS O O N N 154 HIS CB C N N 155 HIS CG C Y N 156 HIS ND1 N Y N 157 HIS CD2 C Y N 158 HIS CE1 C Y N 159 HIS NE2 N Y N 160 HIS OXT O N N 161 HIS H H N N 162 HIS H2 H N N 163 HIS HA H N N 164 HIS HB2 H N N 165 HIS HB3 H N N 166 HIS HD1 H N N 167 HIS HD2 H N N 168 HIS HE1 H N N 169 HIS HE2 H N N 170 HIS HXT H N N 171 HOH O O N N 172 HOH H1 H N N 173 HOH H2 H N N 174 ILE N N N N 175 ILE CA C N S 176 ILE C C N N 177 ILE O O N N 178 ILE CB C N S 179 ILE CG1 C N N 180 ILE CG2 C N N 181 ILE CD1 C N N 182 ILE OXT O N N 183 ILE H H N N 184 ILE H2 H N N 185 ILE HA H N N 186 ILE HB H N N 187 ILE HG12 H N N 188 ILE HG13 H N N 189 ILE HG21 H N N 190 ILE HG22 H N N 191 ILE HG23 H N N 192 ILE HD11 H N N 193 ILE HD12 H N N 194 ILE HD13 H N N 195 ILE HXT H N N 196 LEU N N N N 197 LEU CA C N S 198 LEU C C N N 199 LEU O O N N 200 LEU CB C N N 201 LEU CG C N N 202 LEU CD1 C N N 203 LEU CD2 C N N 204 LEU OXT O N N 205 LEU H H N N 206 LEU H2 H N N 207 LEU HA H N N 208 LEU HB2 H N N 209 LEU HB3 H N N 210 LEU HG H N N 211 LEU HD11 H N N 212 LEU HD12 H N N 213 LEU HD13 H N N 214 LEU HD21 H N N 215 LEU HD22 H N N 216 LEU HD23 H N N 217 LEU HXT H N N 218 LYS N N N N 219 LYS CA C N S 220 LYS C C N N 221 LYS O O N N 222 LYS CB C N N 223 LYS CG C N N 224 LYS CD C N N 225 LYS CE C N N 226 LYS NZ N N N 227 LYS OXT O N N 228 LYS H H N N 229 LYS H2 H N N 230 LYS HA H N N 231 LYS HB2 H N N 232 LYS HB3 H N N 233 LYS HG2 H N N 234 LYS HG3 H N N 235 LYS HD2 H N N 236 LYS HD3 H N N 237 LYS HE2 H N N 238 LYS HE3 H N N 239 LYS HZ1 H N N 240 LYS HZ2 H N N 241 LYS HZ3 H N N 242 LYS HXT H N N 243 MET N N N N 244 MET CA C N S 245 MET C C N N 246 MET O O N N 247 MET CB C N N 248 MET CG C N N 249 MET SD S N N 250 MET CE C N N 251 MET OXT O N N 252 MET H H N N 253 MET H2 H N N 254 MET HA H N N 255 MET HB2 H N N 256 MET HB3 H N N 257 MET HG2 H N N 258 MET HG3 H N N 259 MET HE1 H N N 260 MET HE2 H N N 261 MET HE3 H N N 262 MET HXT H N N 263 PHE N N N N 264 PHE CA C N S 265 PHE C C N N 266 PHE O O N N 267 PHE CB C N N 268 PHE CG C Y N 269 PHE CD1 C Y N 270 PHE CD2 C Y N 271 PHE CE1 C Y N 272 PHE CE2 C Y N 273 PHE CZ C Y N 274 PHE OXT O N N 275 PHE H H N N 276 PHE H2 H N N 277 PHE HA H N N 278 PHE HB2 H N N 279 PHE HB3 H N N 280 PHE HD1 H N N 281 PHE HD2 H N N 282 PHE HE1 H N N 283 PHE HE2 H N N 284 PHE HZ H N N 285 PHE HXT H N N 286 PRO N N N N 287 PRO CA C N S 288 PRO C C N N 289 PRO O O N N 290 PRO CB C N N 291 PRO CG C N N 292 PRO CD C N N 293 PRO OXT O N N 294 PRO H H N N 295 PRO HA H N N 296 PRO HB2 H N N 297 PRO HB3 H N N 298 PRO HG2 H N N 299 PRO HG3 H N N 300 PRO HD2 H N N 301 PRO HD3 H N N 302 PRO HXT H N N 303 SER N N N N 304 SER CA C N S 305 SER C C N N 306 SER O O N N 307 SER CB C N N 308 SER OG O N N 309 SER OXT O N N 310 SER H H N N 311 SER H2 H N N 312 SER HA H N N 313 SER HB2 H N N 314 SER HB3 H N N 315 SER HG H N N 316 SER HXT H N N 317 THR N N N N 318 THR CA C N S 319 THR C C N N 320 THR O O N N 321 THR CB C N R 322 THR OG1 O N N 323 THR CG2 C N N 324 THR OXT O N N 325 THR H H N N 326 THR H2 H N N 327 THR HA H N N 328 THR HB H N N 329 THR HG1 H N N 330 THR HG21 H N N 331 THR HG22 H N N 332 THR HG23 H N N 333 THR HXT H N N 334 TRP N N N N 335 TRP CA C N S 336 TRP C C N N 337 TRP O O N N 338 TRP CB C N N 339 TRP CG C Y N 340 TRP CD1 C Y N 341 TRP CD2 C Y N 342 TRP NE1 N Y N 343 TRP CE2 C Y N 344 TRP CE3 C Y N 345 TRP CZ2 C Y N 346 TRP CZ3 C Y N 347 TRP CH2 C Y N 348 TRP OXT O N N 349 TRP H H N N 350 TRP H2 H N N 351 TRP HA H N N 352 TRP HB2 H N N 353 TRP HB3 H N N 354 TRP HD1 H N N 355 TRP HE1 H N N 356 TRP HE3 H N N 357 TRP HZ2 H N N 358 TRP HZ3 H N N 359 TRP HH2 H N N 360 TRP HXT H N N 361 TYR N N N N 362 TYR CA C N S 363 TYR C C N N 364 TYR O O N N 365 TYR CB C N N 366 TYR CG C Y N 367 TYR CD1 C Y N 368 TYR CD2 C Y N 369 TYR CE1 C Y N 370 TYR CE2 C Y N 371 TYR CZ C Y N 372 TYR OH O N N 373 TYR OXT O N N 374 TYR H H N N 375 TYR H2 H N N 376 TYR HA H N N 377 TYR HB2 H N N 378 TYR HB3 H N N 379 TYR HD1 H N N 380 TYR HD2 H N N 381 TYR HE1 H N N 382 TYR HE2 H N N 383 TYR HH H N N 384 TYR HXT H N N 385 UDP N1 N N N 386 UDP C2 C N N 387 UDP N3 N N N 388 UDP C4 C N N 389 UDP C5 C N N 390 UDP C6 C N N 391 UDP O2 O N N 392 UDP O4 O N N 393 UDP "C1'" C N R 394 UDP "C2'" C N R 395 UDP "O2'" O N N 396 UDP "C3'" C N S 397 UDP "C4'" C N R 398 UDP "O4'" O N N 399 UDP "O3'" O N N 400 UDP "C5'" C N N 401 UDP "O5'" O N N 402 UDP PA P N N 403 UDP O1A O N N 404 UDP O2A O N N 405 UDP O3A O N N 406 UDP PB P N N 407 UDP O1B O N N 408 UDP O2B O N N 409 UDP O3B O N N 410 UDP HN3 H N N 411 UDP H5 H N N 412 UDP H6 H N N 413 UDP "H1'" H N N 414 UDP "H2'" H N N 415 UDP "HO2'" H N N 416 UDP "H3'" H N N 417 UDP "H4'" H N N 418 UDP "HO3'" H N N 419 UDP "H5'1" H N N 420 UDP "H5'2" H N N 421 UDP HOA2 H N N 422 UDP HOB2 H N N 423 UDP HOB3 H N N 424 VAL N N N N 425 VAL CA C N S 426 VAL C C N N 427 VAL O O N N 428 VAL CB C N N 429 VAL CG1 C N N 430 VAL CG2 C N N 431 VAL OXT O N N 432 VAL H H N N 433 VAL H2 H N N 434 VAL HA H N N 435 VAL HB H N N 436 VAL HG11 H N N 437 VAL HG12 H N N 438 VAL HG13 H N N 439 VAL HG21 H N N 440 VAL HG22 H N N 441 VAL HG23 H N N 442 VAL HXT H N N 443 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 GOL C1 O1 sing N N 129 GOL C1 C2 sing N N 130 GOL C1 H11 sing N N 131 GOL C1 H12 sing N N 132 GOL O1 HO1 sing N N 133 GOL C2 O2 sing N N 134 GOL C2 C3 sing N N 135 GOL C2 H2 sing N N 136 GOL O2 HO2 sing N N 137 GOL C3 O3 sing N N 138 GOL C3 H31 sing N N 139 GOL C3 H32 sing N N 140 GOL O3 HO3 sing N N 141 HIS N CA sing N N 142 HIS N H sing N N 143 HIS N H2 sing N N 144 HIS CA C sing N N 145 HIS CA CB sing N N 146 HIS CA HA sing N N 147 HIS C O doub N N 148 HIS C OXT sing N N 149 HIS CB CG sing N N 150 HIS CB HB2 sing N N 151 HIS CB HB3 sing N N 152 HIS CG ND1 sing Y N 153 HIS CG CD2 doub Y N 154 HIS ND1 CE1 doub Y N 155 HIS ND1 HD1 sing N N 156 HIS CD2 NE2 sing Y N 157 HIS CD2 HD2 sing N N 158 HIS CE1 NE2 sing Y N 159 HIS CE1 HE1 sing N N 160 HIS NE2 HE2 sing N N 161 HIS OXT HXT sing N N 162 HOH O H1 sing N N 163 HOH O H2 sing N N 164 ILE N CA sing N N 165 ILE N H sing N N 166 ILE N H2 sing N N 167 ILE CA C sing N N 168 ILE CA CB sing N N 169 ILE CA HA sing N N 170 ILE C O doub N N 171 ILE C OXT sing N N 172 ILE CB CG1 sing N N 173 ILE CB CG2 sing N N 174 ILE CB HB sing N N 175 ILE CG1 CD1 sing N N 176 ILE CG1 HG12 sing N N 177 ILE CG1 HG13 sing N N 178 ILE CG2 HG21 sing N N 179 ILE CG2 HG22 sing N N 180 ILE CG2 HG23 sing N N 181 ILE CD1 HD11 sing N N 182 ILE CD1 HD12 sing N N 183 ILE CD1 HD13 sing N N 184 ILE OXT HXT sing N N 185 LEU N CA sing N N 186 LEU N H sing N N 187 LEU N H2 sing N N 188 LEU CA C sing N N 189 LEU CA CB sing N N 190 LEU CA HA sing N N 191 LEU C O doub N N 192 LEU C OXT sing N N 193 LEU CB CG sing N N 194 LEU CB HB2 sing N N 195 LEU CB HB3 sing N N 196 LEU CG CD1 sing N N 197 LEU CG CD2 sing N N 198 LEU CG HG sing N N 199 LEU CD1 HD11 sing N N 200 LEU CD1 HD12 sing N N 201 LEU CD1 HD13 sing N N 202 LEU CD2 HD21 sing N N 203 LEU CD2 HD22 sing N N 204 LEU CD2 HD23 sing N N 205 LEU OXT HXT sing N N 206 LYS N CA sing N N 207 LYS N H sing N N 208 LYS N H2 sing N N 209 LYS CA C sing N N 210 LYS CA CB sing N N 211 LYS CA HA sing N N 212 LYS C O doub N N 213 LYS C OXT sing N N 214 LYS CB CG sing N N 215 LYS CB HB2 sing N N 216 LYS CB HB3 sing N N 217 LYS CG CD sing N N 218 LYS CG HG2 sing N N 219 LYS CG HG3 sing N N 220 LYS CD CE sing N N 221 LYS CD HD2 sing N N 222 LYS CD HD3 sing N N 223 LYS CE NZ sing N N 224 LYS CE HE2 sing N N 225 LYS CE HE3 sing N N 226 LYS NZ HZ1 sing N N 227 LYS NZ HZ2 sing N N 228 LYS NZ HZ3 sing N N 229 LYS OXT HXT sing N N 230 MET N CA sing N N 231 MET N H sing N N 232 MET N H2 sing N N 233 MET CA C sing N N 234 MET CA CB sing N N 235 MET CA HA sing N N 236 MET C O doub N N 237 MET C OXT sing N N 238 MET CB CG sing N N 239 MET CB HB2 sing N N 240 MET CB HB3 sing N N 241 MET CG SD sing N N 242 MET CG HG2 sing N N 243 MET CG HG3 sing N N 244 MET SD CE sing N N 245 MET CE HE1 sing N N 246 MET CE HE2 sing N N 247 MET CE HE3 sing N N 248 MET OXT HXT sing N N 249 PHE N CA sing N N 250 PHE N H sing N N 251 PHE N H2 sing N N 252 PHE CA C sing N N 253 PHE CA CB sing N N 254 PHE CA HA sing N N 255 PHE C O doub N N 256 PHE C OXT sing N N 257 PHE CB CG sing N N 258 PHE CB HB2 sing N N 259 PHE CB HB3 sing N N 260 PHE CG CD1 doub Y N 261 PHE CG CD2 sing Y N 262 PHE CD1 CE1 sing Y N 263 PHE CD1 HD1 sing N N 264 PHE CD2 CE2 doub Y N 265 PHE CD2 HD2 sing N N 266 PHE CE1 CZ doub Y N 267 PHE CE1 HE1 sing N N 268 PHE CE2 CZ sing Y N 269 PHE CE2 HE2 sing N N 270 PHE CZ HZ sing N N 271 PHE OXT HXT sing N N 272 PRO N CA sing N N 273 PRO N CD sing N N 274 PRO N H sing N N 275 PRO CA C sing N N 276 PRO CA CB sing N N 277 PRO CA HA sing N N 278 PRO C O doub N N 279 PRO C OXT sing N N 280 PRO CB CG sing N N 281 PRO CB HB2 sing N N 282 PRO CB HB3 sing N N 283 PRO CG CD sing N N 284 PRO CG HG2 sing N N 285 PRO CG HG3 sing N N 286 PRO CD HD2 sing N N 287 PRO CD HD3 sing N N 288 PRO OXT HXT sing N N 289 SER N CA sing N N 290 SER N H sing N N 291 SER N H2 sing N N 292 SER CA C sing N N 293 SER CA CB sing N N 294 SER CA HA sing N N 295 SER C O doub N N 296 SER C OXT sing N N 297 SER CB OG sing N N 298 SER CB HB2 sing N N 299 SER CB HB3 sing N N 300 SER OG HG sing N N 301 SER OXT HXT sing N N 302 THR N CA sing N N 303 THR N H sing N N 304 THR N H2 sing N N 305 THR CA C sing N N 306 THR CA CB sing N N 307 THR CA HA sing N N 308 THR C O doub N N 309 THR C OXT sing N N 310 THR CB OG1 sing N N 311 THR CB CG2 sing N N 312 THR CB HB sing N N 313 THR OG1 HG1 sing N N 314 THR CG2 HG21 sing N N 315 THR CG2 HG22 sing N N 316 THR CG2 HG23 sing N N 317 THR OXT HXT sing N N 318 TRP N CA sing N N 319 TRP N H sing N N 320 TRP N H2 sing N N 321 TRP CA C sing N N 322 TRP CA CB sing N N 323 TRP CA HA sing N N 324 TRP C O doub N N 325 TRP C OXT sing N N 326 TRP CB CG sing N N 327 TRP CB HB2 sing N N 328 TRP CB HB3 sing N N 329 TRP CG CD1 doub Y N 330 TRP CG CD2 sing Y N 331 TRP CD1 NE1 sing Y N 332 TRP CD1 HD1 sing N N 333 TRP CD2 CE2 doub Y N 334 TRP CD2 CE3 sing Y N 335 TRP NE1 CE2 sing Y N 336 TRP NE1 HE1 sing N N 337 TRP CE2 CZ2 sing Y N 338 TRP CE3 CZ3 doub Y N 339 TRP CE3 HE3 sing N N 340 TRP CZ2 CH2 doub Y N 341 TRP CZ2 HZ2 sing N N 342 TRP CZ3 CH2 sing Y N 343 TRP CZ3 HZ3 sing N N 344 TRP CH2 HH2 sing N N 345 TRP OXT HXT sing N N 346 TYR N CA sing N N 347 TYR N H sing N N 348 TYR N H2 sing N N 349 TYR CA C sing N N 350 TYR CA CB sing N N 351 TYR CA HA sing N N 352 TYR C O doub N N 353 TYR C OXT sing N N 354 TYR CB CG sing N N 355 TYR CB HB2 sing N N 356 TYR CB HB3 sing N N 357 TYR CG CD1 doub Y N 358 TYR CG CD2 sing Y N 359 TYR CD1 CE1 sing Y N 360 TYR CD1 HD1 sing N N 361 TYR CD2 CE2 doub Y N 362 TYR CD2 HD2 sing N N 363 TYR CE1 CZ doub Y N 364 TYR CE1 HE1 sing N N 365 TYR CE2 CZ sing Y N 366 TYR CE2 HE2 sing N N 367 TYR CZ OH sing N N 368 TYR OH HH sing N N 369 TYR OXT HXT sing N N 370 UDP N1 C2 sing N N 371 UDP N1 C6 sing N N 372 UDP N1 "C1'" sing N N 373 UDP C2 N3 sing N N 374 UDP C2 O2 doub N N 375 UDP N3 C4 sing N N 376 UDP N3 HN3 sing N N 377 UDP C4 C5 sing N N 378 UDP C4 O4 doub N N 379 UDP C5 C6 doub N N 380 UDP C5 H5 sing N N 381 UDP C6 H6 sing N N 382 UDP "C1'" "C2'" sing N N 383 UDP "C1'" "O4'" sing N N 384 UDP "C1'" "H1'" sing N N 385 UDP "C2'" "O2'" sing N N 386 UDP "C2'" "C3'" sing N N 387 UDP "C2'" "H2'" sing N N 388 UDP "O2'" "HO2'" sing N N 389 UDP "C3'" "C4'" sing N N 390 UDP "C3'" "O3'" sing N N 391 UDP "C3'" "H3'" sing N N 392 UDP "C4'" "O4'" sing N N 393 UDP "C4'" "C5'" sing N N 394 UDP "C4'" "H4'" sing N N 395 UDP "O3'" "HO3'" sing N N 396 UDP "C5'" "O5'" sing N N 397 UDP "C5'" "H5'1" sing N N 398 UDP "C5'" "H5'2" sing N N 399 UDP "O5'" PA sing N N 400 UDP PA O1A doub N N 401 UDP PA O2A sing N N 402 UDP PA O3A sing N N 403 UDP O2A HOA2 sing N N 404 UDP O3A PB sing N N 405 UDP PB O1B doub N N 406 UDP PB O2B sing N N 407 UDP PB O3B sing N N 408 UDP O2B HOB2 sing N N 409 UDP O3B HOB3 sing N N 410 VAL N CA sing N N 411 VAL N H sing N N 412 VAL N H2 sing N N 413 VAL CA C sing N N 414 VAL CA CB sing N N 415 VAL CA HA sing N N 416 VAL C O doub N N 417 VAL C OXT sing N N 418 VAL CB CG1 sing N N 419 VAL CB CG2 sing N N 420 VAL CB HB sing N N 421 VAL CG1 HG11 sing N N 422 VAL CG1 HG12 sing N N 423 VAL CG1 HG13 sing N N 424 VAL CG2 HG21 sing N N 425 VAL CG2 HG22 sing N N 426 VAL CG2 HG23 sing N N 427 VAL OXT HXT sing N N 428 # _atom_sites.entry_id 4DE7 _atom_sites.fract_transf_matrix[1][1] 0.010116 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010116 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007835 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_