data_4DKX # _entry.id 4DKX # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.388 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4DKX pdb_00004dkx 10.2210/pdb4dkx/pdb RCSB RCSB070458 ? ? WWPDB D_1000070458 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-10-17 2 'Structure model' 1 1 2024-03-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_struct_conn_angle 5 2 'Structure model' struct_conn 6 2 'Structure model' struct_ref_seq_dif 7 2 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 4 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id' 11 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 12 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 13 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 14 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 15 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 16 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 17 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 18 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 19 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 20 2 'Structure model' '_pdbx_struct_conn_angle.value' 21 2 'Structure model' '_struct_conn.pdbx_dist_value' 22 2 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 23 2 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 24 2 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 25 2 'Structure model' '_struct_conn.ptnr1_label_asym_id' 26 2 'Structure model' '_struct_conn.ptnr1_label_atom_id' 27 2 'Structure model' '_struct_conn.ptnr1_label_comp_id' 28 2 'Structure model' '_struct_conn.ptnr1_label_seq_id' 29 2 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 30 2 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 31 2 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 32 2 'Structure model' '_struct_conn.ptnr2_label_asym_id' 33 2 'Structure model' '_struct_conn.ptnr2_label_atom_id' 34 2 'Structure model' '_struct_conn.ptnr2_label_comp_id' 35 2 'Structure model' '_struct_ref_seq_dif.details' 36 2 'Structure model' '_struct_site.pdbx_auth_asym_id' 37 2 'Structure model' '_struct_site.pdbx_auth_comp_id' 38 2 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4DKX _pdbx_database_status.recvd_initial_deposition_date 2012-02-04 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Park, H.H.' 1 'Shin, Y.-C.' 2 # _citation.id primary _citation.title ;Crystal structure of Rab6A'(Q72L) mutant reveals unexpected GDP/Mg2+ binding with opened GTP-binding domain ; _citation.journal_abbrev Biochem.Biophys.Res.Commun. _citation.journal_volume 424 _citation.page_first 269 _citation.page_last 273 _citation.year 2012 _citation.journal_id_ASTM BBRCA9 _citation.country US _citation.journal_id_ISSN 0006-291X _citation.journal_id_CSD 0146 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22750005 _citation.pdbx_database_id_DOI 10.1016/j.bbrc.2012.06.102 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Shin, Y.-C.' 1 ? primary 'Yoon, J.H.' 2 ? primary 'Jang, T.-H.' 3 ? primary 'Kim, S.Y.' 4 ? primary 'Heo, W.D.' 5 ? primary 'So, I.' 6 ? primary 'Jeon, J.-H.' 7 ? primary 'Park, H.H.' 8 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Ras-related protein Rab-6A' 24632.896 2 ? Q72L ? ? 2 non-polymer syn "GUANOSINE-5'-DIPHOSPHATE" 443.201 2 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 4 water nat water 18.015 247 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'RAB GTPase, Rab-6' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MSTGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGLERFRSLIP SYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAG YNVKQLFRRVAAALPGMESTQDRSREDMIDIKLEKPQEQPVSEGGCSCLEHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MSTGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGLERFRSLIP SYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAG YNVKQLFRRVAAALPGMESTQDRSREDMIDIKLEKPQEQPVSEGGCSCLEHHHHHH ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "GUANOSINE-5'-DIPHOSPHATE" GDP 3 'MAGNESIUM ION' MG 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 SER n 1 3 THR n 1 4 GLY n 1 5 GLY n 1 6 ASP n 1 7 PHE n 1 8 GLY n 1 9 ASN n 1 10 PRO n 1 11 LEU n 1 12 ARG n 1 13 LYS n 1 14 PHE n 1 15 LYS n 1 16 LEU n 1 17 VAL n 1 18 PHE n 1 19 LEU n 1 20 GLY n 1 21 GLU n 1 22 GLN n 1 23 SER n 1 24 VAL n 1 25 GLY n 1 26 LYS n 1 27 THR n 1 28 SER n 1 29 LEU n 1 30 ILE n 1 31 THR n 1 32 ARG n 1 33 PHE n 1 34 MET n 1 35 TYR n 1 36 ASP n 1 37 SER n 1 38 PHE n 1 39 ASP n 1 40 ASN n 1 41 THR n 1 42 TYR n 1 43 GLN n 1 44 ALA n 1 45 THR n 1 46 ILE n 1 47 GLY n 1 48 ILE n 1 49 ASP n 1 50 PHE n 1 51 LEU n 1 52 SER n 1 53 LYS n 1 54 THR n 1 55 MET n 1 56 TYR n 1 57 LEU n 1 58 GLU n 1 59 ASP n 1 60 ARG n 1 61 THR n 1 62 ILE n 1 63 ARG n 1 64 LEU n 1 65 GLN n 1 66 LEU n 1 67 TRP n 1 68 ASP n 1 69 THR n 1 70 ALA n 1 71 GLY n 1 72 LEU n 1 73 GLU n 1 74 ARG n 1 75 PHE n 1 76 ARG n 1 77 SER n 1 78 LEU n 1 79 ILE n 1 80 PRO n 1 81 SER n 1 82 TYR n 1 83 ILE n 1 84 ARG n 1 85 ASP n 1 86 SER n 1 87 ALA n 1 88 ALA n 1 89 ALA n 1 90 VAL n 1 91 VAL n 1 92 VAL n 1 93 TYR n 1 94 ASP n 1 95 ILE n 1 96 THR n 1 97 ASN n 1 98 VAL n 1 99 ASN n 1 100 SER n 1 101 PHE n 1 102 GLN n 1 103 GLN n 1 104 THR n 1 105 THR n 1 106 LYS n 1 107 TRP n 1 108 ILE n 1 109 ASP n 1 110 ASP n 1 111 VAL n 1 112 ARG n 1 113 THR n 1 114 GLU n 1 115 ARG n 1 116 GLY n 1 117 SER n 1 118 ASP n 1 119 VAL n 1 120 ILE n 1 121 ILE n 1 122 MET n 1 123 LEU n 1 124 VAL n 1 125 GLY n 1 126 ASN n 1 127 LYS n 1 128 THR n 1 129 ASP n 1 130 LEU n 1 131 ALA n 1 132 ASP n 1 133 LYS n 1 134 ARG n 1 135 GLN n 1 136 VAL n 1 137 SER n 1 138 ILE n 1 139 GLU n 1 140 GLU n 1 141 GLY n 1 142 GLU n 1 143 ARG n 1 144 LYS n 1 145 ALA n 1 146 LYS n 1 147 GLU n 1 148 LEU n 1 149 ASN n 1 150 VAL n 1 151 MET n 1 152 PHE n 1 153 ILE n 1 154 GLU n 1 155 THR n 1 156 SER n 1 157 ALA n 1 158 LYS n 1 159 ALA n 1 160 GLY n 1 161 TYR n 1 162 ASN n 1 163 VAL n 1 164 LYS n 1 165 GLN n 1 166 LEU n 1 167 PHE n 1 168 ARG n 1 169 ARG n 1 170 VAL n 1 171 ALA n 1 172 ALA n 1 173 ALA n 1 174 LEU n 1 175 PRO n 1 176 GLY n 1 177 MET n 1 178 GLU n 1 179 SER n 1 180 THR n 1 181 GLN n 1 182 ASP n 1 183 ARG n 1 184 SER n 1 185 ARG n 1 186 GLU n 1 187 ASP n 1 188 MET n 1 189 ILE n 1 190 ASP n 1 191 ILE n 1 192 LYS n 1 193 LEU n 1 194 GLU n 1 195 LYS n 1 196 PRO n 1 197 GLN n 1 198 GLU n 1 199 GLN n 1 200 PRO n 1 201 VAL n 1 202 SER n 1 203 GLU n 1 204 GLY n 1 205 GLY n 1 206 CYS n 1 207 SER n 1 208 CYS n 1 209 LEU n 1 210 GLU n 1 211 HIS n 1 212 HIS n 1 213 HIS n 1 214 HIS n 1 215 HIS n 1 216 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'RAB6A, RAB6' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GDP 'RNA linking' n "GUANOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O11 P2' 443.201 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 SER 2 2 ? ? ? A . n A 1 3 THR 3 3 ? ? ? A . n A 1 4 GLY 4 4 ? ? ? A . n A 1 5 GLY 5 5 ? ? ? A . n A 1 6 ASP 6 6 ? ? ? A . n A 1 7 PHE 7 7 ? ? ? A . n A 1 8 GLY 8 8 ? ? ? A . n A 1 9 ASN 9 9 ? ? ? A . n A 1 10 PRO 10 10 ? ? ? A . n A 1 11 LEU 11 11 ? ? ? A . n A 1 12 ARG 12 12 ? ? ? A . n A 1 13 LYS 13 13 13 LYS LYS A . n A 1 14 PHE 14 14 14 PHE PHE A . n A 1 15 LYS 15 15 15 LYS LYS A . n A 1 16 LEU 16 16 16 LEU LEU A . n A 1 17 VAL 17 17 17 VAL VAL A . n A 1 18 PHE 18 18 18 PHE PHE A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 GLY 20 20 20 GLY GLY A . n A 1 21 GLU 21 21 21 GLU GLU A . n A 1 22 GLN 22 22 22 GLN GLN A . n A 1 23 SER 23 23 23 SER SER A . n A 1 24 VAL 24 24 24 VAL VAL A . n A 1 25 GLY 25 25 25 GLY GLY A . n A 1 26 LYS 26 26 26 LYS LYS A . n A 1 27 THR 27 27 27 THR THR A . n A 1 28 SER 28 28 28 SER SER A . n A 1 29 LEU 29 29 29 LEU LEU A . n A 1 30 ILE 30 30 30 ILE ILE A . n A 1 31 THR 31 31 31 THR THR A . n A 1 32 ARG 32 32 32 ARG ARG A . n A 1 33 PHE 33 33 33 PHE PHE A . n A 1 34 MET 34 34 34 MET MET A . n A 1 35 TYR 35 35 35 TYR TYR A . n A 1 36 ASP 36 36 36 ASP ASP A . n A 1 37 SER 37 37 37 SER SER A . n A 1 38 PHE 38 38 38 PHE PHE A . n A 1 39 ASP 39 39 39 ASP ASP A . n A 1 40 ASN 40 40 ? ? ? A . n A 1 41 THR 41 41 ? ? ? A . n A 1 42 TYR 42 42 ? ? ? A . n A 1 43 GLN 43 43 ? ? ? A . n A 1 44 ALA 44 44 ? ? ? A . n A 1 45 THR 45 45 ? ? ? A . n A 1 46 ILE 46 46 ? ? ? A . n A 1 47 GLY 47 47 ? ? ? A . n A 1 48 ILE 48 48 ? ? ? A . n A 1 49 ASP 49 49 ? ? ? A . n A 1 50 PHE 50 50 50 PHE PHE A . n A 1 51 LEU 51 51 51 LEU LEU A . n A 1 52 SER 52 52 52 SER SER A . n A 1 53 LYS 53 53 53 LYS LYS A . n A 1 54 THR 54 54 54 THR THR A . n A 1 55 MET 55 55 55 MET MET A . n A 1 56 TYR 56 56 56 TYR TYR A . n A 1 57 LEU 57 57 57 LEU LEU A . n A 1 58 GLU 58 58 58 GLU GLU A . n A 1 59 ASP 59 59 59 ASP ASP A . n A 1 60 ARG 60 60 60 ARG ARG A . n A 1 61 THR 61 61 61 THR THR A . n A 1 62 ILE 62 62 62 ILE ILE A . n A 1 63 ARG 63 63 63 ARG ARG A . n A 1 64 LEU 64 64 64 LEU LEU A . n A 1 65 GLN 65 65 65 GLN GLN A . n A 1 66 LEU 66 66 66 LEU LEU A . n A 1 67 TRP 67 67 67 TRP TRP A . n A 1 68 ASP 68 68 68 ASP ASP A . n A 1 69 THR 69 69 69 THR THR A . n A 1 70 ALA 70 70 70 ALA ALA A . n A 1 71 GLY 71 71 71 GLY GLY A . n A 1 72 LEU 72 72 72 LEU LEU A . n A 1 73 GLU 73 73 73 GLU GLU A . n A 1 74 ARG 74 74 74 ARG ARG A . n A 1 75 PHE 75 75 75 PHE PHE A . n A 1 76 ARG 76 76 76 ARG ARG A . n A 1 77 SER 77 77 77 SER SER A . n A 1 78 LEU 78 78 78 LEU LEU A . n A 1 79 ILE 79 79 79 ILE ILE A . n A 1 80 PRO 80 80 80 PRO PRO A . n A 1 81 SER 81 81 81 SER SER A . n A 1 82 TYR 82 82 82 TYR TYR A . n A 1 83 ILE 83 83 83 ILE ILE A . n A 1 84 ARG 84 84 84 ARG ARG A . n A 1 85 ASP 85 85 85 ASP ASP A . n A 1 86 SER 86 86 86 SER SER A . n A 1 87 ALA 87 87 87 ALA ALA A . n A 1 88 ALA 88 88 88 ALA ALA A . n A 1 89 ALA 89 89 89 ALA ALA A . n A 1 90 VAL 90 90 90 VAL VAL A . n A 1 91 VAL 91 91 91 VAL VAL A . n A 1 92 VAL 92 92 92 VAL VAL A . n A 1 93 TYR 93 93 93 TYR TYR A . n A 1 94 ASP 94 94 94 ASP ASP A . n A 1 95 ILE 95 95 95 ILE ILE A . n A 1 96 THR 96 96 96 THR THR A . n A 1 97 ASN 97 97 97 ASN ASN A . n A 1 98 VAL 98 98 98 VAL VAL A . n A 1 99 ASN 99 99 99 ASN ASN A . n A 1 100 SER 100 100 100 SER SER A . n A 1 101 PHE 101 101 101 PHE PHE A . n A 1 102 GLN 102 102 102 GLN GLN A . n A 1 103 GLN 103 103 103 GLN GLN A . n A 1 104 THR 104 104 104 THR THR A . n A 1 105 THR 105 105 105 THR THR A . n A 1 106 LYS 106 106 106 LYS LYS A . n A 1 107 TRP 107 107 107 TRP TRP A . n A 1 108 ILE 108 108 108 ILE ILE A . n A 1 109 ASP 109 109 109 ASP ASP A . n A 1 110 ASP 110 110 110 ASP ASP A . n A 1 111 VAL 111 111 111 VAL VAL A . n A 1 112 ARG 112 112 112 ARG ARG A . n A 1 113 THR 113 113 113 THR THR A . n A 1 114 GLU 114 114 114 GLU GLU A . n A 1 115 ARG 115 115 115 ARG ARG A . n A 1 116 GLY 116 116 116 GLY GLY A . n A 1 117 SER 117 117 117 SER SER A . n A 1 118 ASP 118 118 118 ASP ASP A . n A 1 119 VAL 119 119 119 VAL VAL A . n A 1 120 ILE 120 120 120 ILE ILE A . n A 1 121 ILE 121 121 121 ILE ILE A . n A 1 122 MET 122 122 122 MET MET A . n A 1 123 LEU 123 123 123 LEU LEU A . n A 1 124 VAL 124 124 124 VAL VAL A . n A 1 125 GLY 125 125 125 GLY GLY A . n A 1 126 ASN 126 126 126 ASN ASN A . n A 1 127 LYS 127 127 127 LYS LYS A . n A 1 128 THR 128 128 128 THR THR A . n A 1 129 ASP 129 129 129 ASP ASP A . n A 1 130 LEU 130 130 130 LEU LEU A . n A 1 131 ALA 131 131 131 ALA ALA A . n A 1 132 ASP 132 132 132 ASP ASP A . n A 1 133 LYS 133 133 133 LYS LYS A . n A 1 134 ARG 134 134 134 ARG ARG A . n A 1 135 GLN 135 135 135 GLN GLN A . n A 1 136 VAL 136 136 136 VAL VAL A . n A 1 137 SER 137 137 137 SER SER A . n A 1 138 ILE 138 138 138 ILE ILE A . n A 1 139 GLU 139 139 139 GLU GLU A . n A 1 140 GLU 140 140 140 GLU GLU A . n A 1 141 GLY 141 141 141 GLY GLY A . n A 1 142 GLU 142 142 142 GLU GLU A . n A 1 143 ARG 143 143 143 ARG ARG A . n A 1 144 LYS 144 144 144 LYS LYS A . n A 1 145 ALA 145 145 145 ALA ALA A . n A 1 146 LYS 146 146 146 LYS LYS A . n A 1 147 GLU 147 147 147 GLU GLU A . n A 1 148 LEU 148 148 148 LEU LEU A . n A 1 149 ASN 149 149 149 ASN ASN A . n A 1 150 VAL 150 150 150 VAL VAL A . n A 1 151 MET 151 151 151 MET MET A . n A 1 152 PHE 152 152 152 PHE PHE A . n A 1 153 ILE 153 153 153 ILE ILE A . n A 1 154 GLU 154 154 154 GLU GLU A . n A 1 155 THR 155 155 155 THR THR A . n A 1 156 SER 156 156 156 SER SER A . n A 1 157 ALA 157 157 157 ALA ALA A . n A 1 158 LYS 158 158 158 LYS LYS A . n A 1 159 ALA 159 159 159 ALA ALA A . n A 1 160 GLY 160 160 160 GLY GLY A . n A 1 161 TYR 161 161 161 TYR TYR A . n A 1 162 ASN 162 162 162 ASN ASN A . n A 1 163 VAL 163 163 163 VAL VAL A . n A 1 164 LYS 164 164 164 LYS LYS A . n A 1 165 GLN 165 165 165 GLN GLN A . n A 1 166 LEU 166 166 166 LEU LEU A . n A 1 167 PHE 167 167 167 PHE PHE A . n A 1 168 ARG 168 168 168 ARG ARG A . n A 1 169 ARG 169 169 169 ARG ARG A . n A 1 170 VAL 170 170 170 VAL VAL A . n A 1 171 ALA 171 171 171 ALA ALA A . n A 1 172 ALA 172 172 172 ALA ALA A . n A 1 173 ALA 173 173 173 ALA ALA A . n A 1 174 LEU 174 174 174 LEU LEU A . n A 1 175 PRO 175 175 ? ? ? A . n A 1 176 GLY 176 176 ? ? ? A . n A 1 177 MET 177 177 ? ? ? A . n A 1 178 GLU 178 178 ? ? ? A . n A 1 179 SER 179 179 ? ? ? A . n A 1 180 THR 180 180 ? ? ? A . n A 1 181 GLN 181 181 ? ? ? A . n A 1 182 ASP 182 182 ? ? ? A . n A 1 183 ARG 183 183 ? ? ? A . n A 1 184 SER 184 184 ? ? ? A . n A 1 185 ARG 185 185 ? ? ? A . n A 1 186 GLU 186 186 ? ? ? A . n A 1 187 ASP 187 187 ? ? ? A . n A 1 188 MET 188 188 ? ? ? A . n A 1 189 ILE 189 189 ? ? ? A . n A 1 190 ASP 190 190 ? ? ? A . n A 1 191 ILE 191 191 ? ? ? A . n A 1 192 LYS 192 192 ? ? ? A . n A 1 193 LEU 193 193 ? ? ? A . n A 1 194 GLU 194 194 ? ? ? A . n A 1 195 LYS 195 195 ? ? ? A . n A 1 196 PRO 196 196 ? ? ? A . n A 1 197 GLN 197 197 ? ? ? A . n A 1 198 GLU 198 198 ? ? ? A . n A 1 199 GLN 199 199 ? ? ? A . n A 1 200 PRO 200 200 ? ? ? A . n A 1 201 VAL 201 201 ? ? ? A . n A 1 202 SER 202 202 ? ? ? A . n A 1 203 GLU 203 203 ? ? ? A . n A 1 204 GLY 204 204 ? ? ? A . n A 1 205 GLY 205 205 ? ? ? A . n A 1 206 CYS 206 206 ? ? ? A . n A 1 207 SER 207 207 ? ? ? A . n A 1 208 CYS 208 208 ? ? ? A . n A 1 209 LEU 209 209 ? ? ? A . n A 1 210 GLU 210 210 ? ? ? A . n A 1 211 HIS 211 211 ? ? ? A . n A 1 212 HIS 212 212 ? ? ? A . n A 1 213 HIS 213 213 ? ? ? A . n A 1 214 HIS 214 214 ? ? ? A . n A 1 215 HIS 215 215 ? ? ? A . n A 1 216 HIS 216 216 ? ? ? A . n B 1 1 MET 1 1 ? ? ? B . n B 1 2 SER 2 2 ? ? ? B . n B 1 3 THR 3 3 ? ? ? B . n B 1 4 GLY 4 4 ? ? ? B . n B 1 5 GLY 5 5 ? ? ? B . n B 1 6 ASP 6 6 ? ? ? B . n B 1 7 PHE 7 7 ? ? ? B . n B 1 8 GLY 8 8 ? ? ? B . n B 1 9 ASN 9 9 ? ? ? B . n B 1 10 PRO 10 10 ? ? ? B . n B 1 11 LEU 11 11 ? ? ? B . n B 1 12 ARG 12 12 12 ARG ARG B . n B 1 13 LYS 13 13 13 LYS LYS B . n B 1 14 PHE 14 14 14 PHE PHE B . n B 1 15 LYS 15 15 15 LYS LYS B . n B 1 16 LEU 16 16 16 LEU LEU B . n B 1 17 VAL 17 17 17 VAL VAL B . n B 1 18 PHE 18 18 18 PHE PHE B . n B 1 19 LEU 19 19 19 LEU LEU B . n B 1 20 GLY 20 20 20 GLY GLY B . n B 1 21 GLU 21 21 21 GLU GLU B . n B 1 22 GLN 22 22 22 GLN GLN B . n B 1 23 SER 23 23 23 SER SER B . n B 1 24 VAL 24 24 24 VAL VAL B . n B 1 25 GLY 25 25 25 GLY GLY B . n B 1 26 LYS 26 26 26 LYS LYS B . n B 1 27 THR 27 27 27 THR THR B . n B 1 28 SER 28 28 28 SER SER B . n B 1 29 LEU 29 29 29 LEU LEU B . n B 1 30 ILE 30 30 30 ILE ILE B . n B 1 31 THR 31 31 31 THR THR B . n B 1 32 ARG 32 32 32 ARG ARG B . n B 1 33 PHE 33 33 33 PHE PHE B . n B 1 34 MET 34 34 34 MET MET B . n B 1 35 TYR 35 35 35 TYR TYR B . n B 1 36 ASP 36 36 36 ASP ASP B . n B 1 37 SER 37 37 37 SER SER B . n B 1 38 PHE 38 38 38 PHE PHE B . n B 1 39 ASP 39 39 ? ? ? B . n B 1 40 ASN 40 40 ? ? ? B . n B 1 41 THR 41 41 ? ? ? B . n B 1 42 TYR 42 42 ? ? ? B . n B 1 43 GLN 43 43 ? ? ? B . n B 1 44 ALA 44 44 ? ? ? B . n B 1 45 THR 45 45 ? ? ? B . n B 1 46 ILE 46 46 ? ? ? B . n B 1 47 GLY 47 47 ? ? ? B . n B 1 48 ILE 48 48 48 ILE ILE B . n B 1 49 ASP 49 49 49 ASP ASP B . n B 1 50 PHE 50 50 50 PHE PHE B . n B 1 51 LEU 51 51 51 LEU LEU B . n B 1 52 SER 52 52 52 SER SER B . n B 1 53 LYS 53 53 53 LYS LYS B . n B 1 54 THR 54 54 54 THR THR B . n B 1 55 MET 55 55 55 MET MET B . n B 1 56 TYR 56 56 56 TYR TYR B . n B 1 57 LEU 57 57 57 LEU LEU B . n B 1 58 GLU 58 58 58 GLU GLU B . n B 1 59 ASP 59 59 59 ASP ASP B . n B 1 60 ARG 60 60 60 ARG ARG B . n B 1 61 THR 61 61 61 THR THR B . n B 1 62 ILE 62 62 62 ILE ILE B . n B 1 63 ARG 63 63 63 ARG ARG B . n B 1 64 LEU 64 64 64 LEU LEU B . n B 1 65 GLN 65 65 65 GLN GLN B . n B 1 66 LEU 66 66 66 LEU LEU B . n B 1 67 TRP 67 67 67 TRP TRP B . n B 1 68 ASP 68 68 68 ASP ASP B . n B 1 69 THR 69 69 69 THR THR B . n B 1 70 ALA 70 70 70 ALA ALA B . n B 1 71 GLY 71 71 71 GLY GLY B . n B 1 72 LEU 72 72 72 LEU LEU B . n B 1 73 GLU 73 73 73 GLU GLU B . n B 1 74 ARG 74 74 74 ARG ARG B . n B 1 75 PHE 75 75 75 PHE PHE B . n B 1 76 ARG 76 76 76 ARG ARG B . n B 1 77 SER 77 77 77 SER SER B . n B 1 78 LEU 78 78 78 LEU LEU B . n B 1 79 ILE 79 79 79 ILE ILE B . n B 1 80 PRO 80 80 80 PRO PRO B . n B 1 81 SER 81 81 81 SER SER B . n B 1 82 TYR 82 82 82 TYR TYR B . n B 1 83 ILE 83 83 83 ILE ILE B . n B 1 84 ARG 84 84 84 ARG ARG B . n B 1 85 ASP 85 85 85 ASP ASP B . n B 1 86 SER 86 86 86 SER SER B . n B 1 87 ALA 87 87 87 ALA ALA B . n B 1 88 ALA 88 88 88 ALA ALA B . n B 1 89 ALA 89 89 89 ALA ALA B . n B 1 90 VAL 90 90 90 VAL VAL B . n B 1 91 VAL 91 91 91 VAL VAL B . n B 1 92 VAL 92 92 92 VAL VAL B . n B 1 93 TYR 93 93 93 TYR TYR B . n B 1 94 ASP 94 94 94 ASP ASP B . n B 1 95 ILE 95 95 95 ILE ILE B . n B 1 96 THR 96 96 96 THR THR B . n B 1 97 ASN 97 97 97 ASN ASN B . n B 1 98 VAL 98 98 98 VAL VAL B . n B 1 99 ASN 99 99 99 ASN ASN B . n B 1 100 SER 100 100 100 SER SER B . n B 1 101 PHE 101 101 101 PHE PHE B . n B 1 102 GLN 102 102 102 GLN GLN B . n B 1 103 GLN 103 103 103 GLN GLN B . n B 1 104 THR 104 104 104 THR THR B . n B 1 105 THR 105 105 105 THR THR B . n B 1 106 LYS 106 106 106 LYS LYS B . n B 1 107 TRP 107 107 107 TRP TRP B . n B 1 108 ILE 108 108 108 ILE ILE B . n B 1 109 ASP 109 109 109 ASP ASP B . n B 1 110 ASP 110 110 110 ASP ASP B . n B 1 111 VAL 111 111 111 VAL VAL B . n B 1 112 ARG 112 112 112 ARG ARG B . n B 1 113 THR 113 113 113 THR THR B . n B 1 114 GLU 114 114 114 GLU GLU B . n B 1 115 ARG 115 115 115 ARG ARG B . n B 1 116 GLY 116 116 116 GLY GLY B . n B 1 117 SER 117 117 117 SER SER B . n B 1 118 ASP 118 118 118 ASP ASP B . n B 1 119 VAL 119 119 119 VAL VAL B . n B 1 120 ILE 120 120 120 ILE ILE B . n B 1 121 ILE 121 121 121 ILE ILE B . n B 1 122 MET 122 122 122 MET MET B . n B 1 123 LEU 123 123 123 LEU LEU B . n B 1 124 VAL 124 124 124 VAL VAL B . n B 1 125 GLY 125 125 125 GLY GLY B . n B 1 126 ASN 126 126 126 ASN ASN B . n B 1 127 LYS 127 127 127 LYS LYS B . n B 1 128 THR 128 128 128 THR THR B . n B 1 129 ASP 129 129 129 ASP ASP B . n B 1 130 LEU 130 130 130 LEU LEU B . n B 1 131 ALA 131 131 131 ALA ALA B . n B 1 132 ASP 132 132 132 ASP ASP B . n B 1 133 LYS 133 133 133 LYS LYS B . n B 1 134 ARG 134 134 134 ARG ARG B . n B 1 135 GLN 135 135 135 GLN GLN B . n B 1 136 VAL 136 136 136 VAL VAL B . n B 1 137 SER 137 137 137 SER SER B . n B 1 138 ILE 138 138 138 ILE ILE B . n B 1 139 GLU 139 139 139 GLU GLU B . n B 1 140 GLU 140 140 140 GLU GLU B . n B 1 141 GLY 141 141 141 GLY GLY B . n B 1 142 GLU 142 142 142 GLU GLU B . n B 1 143 ARG 143 143 143 ARG ARG B . n B 1 144 LYS 144 144 144 LYS LYS B . n B 1 145 ALA 145 145 145 ALA ALA B . n B 1 146 LYS 146 146 146 LYS LYS B . n B 1 147 GLU 147 147 147 GLU GLU B . n B 1 148 LEU 148 148 148 LEU LEU B . n B 1 149 ASN 149 149 149 ASN ASN B . n B 1 150 VAL 150 150 150 VAL VAL B . n B 1 151 MET 151 151 151 MET MET B . n B 1 152 PHE 152 152 152 PHE PHE B . n B 1 153 ILE 153 153 153 ILE ILE B . n B 1 154 GLU 154 154 154 GLU GLU B . n B 1 155 THR 155 155 155 THR THR B . n B 1 156 SER 156 156 156 SER SER B . n B 1 157 ALA 157 157 157 ALA ALA B . n B 1 158 LYS 158 158 158 LYS LYS B . n B 1 159 ALA 159 159 159 ALA ALA B . n B 1 160 GLY 160 160 160 GLY GLY B . n B 1 161 TYR 161 161 161 TYR TYR B . n B 1 162 ASN 162 162 162 ASN ASN B . n B 1 163 VAL 163 163 163 VAL VAL B . n B 1 164 LYS 164 164 164 LYS LYS B . n B 1 165 GLN 165 165 165 GLN GLN B . n B 1 166 LEU 166 166 166 LEU LEU B . n B 1 167 PHE 167 167 167 PHE PHE B . n B 1 168 ARG 168 168 168 ARG ARG B . n B 1 169 ARG 169 169 169 ARG ARG B . n B 1 170 VAL 170 170 170 VAL VAL B . n B 1 171 ALA 171 171 171 ALA ALA B . n B 1 172 ALA 172 172 172 ALA ALA B . n B 1 173 ALA 173 173 173 ALA ALA B . n B 1 174 LEU 174 174 174 LEU LEU B . n B 1 175 PRO 175 175 175 PRO PRO B . n B 1 176 GLY 176 176 ? ? ? B . n B 1 177 MET 177 177 ? ? ? B . n B 1 178 GLU 178 178 ? ? ? B . n B 1 179 SER 179 179 ? ? ? B . n B 1 180 THR 180 180 ? ? ? B . n B 1 181 GLN 181 181 ? ? ? B . n B 1 182 ASP 182 182 ? ? ? B . n B 1 183 ARG 183 183 ? ? ? B . n B 1 184 SER 184 184 ? ? ? B . n B 1 185 ARG 185 185 ? ? ? B . n B 1 186 GLU 186 186 ? ? ? B . n B 1 187 ASP 187 187 ? ? ? B . n B 1 188 MET 188 188 ? ? ? B . n B 1 189 ILE 189 189 ? ? ? B . n B 1 190 ASP 190 190 ? ? ? B . n B 1 191 ILE 191 191 ? ? ? B . n B 1 192 LYS 192 192 ? ? ? B . n B 1 193 LEU 193 193 ? ? ? B . n B 1 194 GLU 194 194 ? ? ? B . n B 1 195 LYS 195 195 ? ? ? B . n B 1 196 PRO 196 196 ? ? ? B . n B 1 197 GLN 197 197 ? ? ? B . n B 1 198 GLU 198 198 ? ? ? B . n B 1 199 GLN 199 199 ? ? ? B . n B 1 200 PRO 200 200 ? ? ? B . n B 1 201 VAL 201 201 ? ? ? B . n B 1 202 SER 202 202 ? ? ? B . n B 1 203 GLU 203 203 ? ? ? B . n B 1 204 GLY 204 204 ? ? ? B . n B 1 205 GLY 205 205 ? ? ? B . n B 1 206 CYS 206 206 ? ? ? B . n B 1 207 SER 207 207 ? ? ? B . n B 1 208 CYS 208 208 ? ? ? B . n B 1 209 LEU 209 209 ? ? ? B . n B 1 210 GLU 210 210 ? ? ? B . n B 1 211 HIS 211 211 ? ? ? B . n B 1 212 HIS 212 212 ? ? ? B . n B 1 213 HIS 213 213 ? ? ? B . n B 1 214 HIS 214 214 ? ? ? B . n B 1 215 HIS 215 215 ? ? ? B . n B 1 216 HIS 216 216 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GDP 1 301 200 GDP GDP A . D 3 MG 1 302 1 MG MG A . E 3 MG 1 301 1 MG MG B . F 2 GDP 1 302 200 GDP GDP B . G 4 HOH 1 401 7 HOH HOH A . G 4 HOH 2 402 8 HOH HOH A . G 4 HOH 3 403 11 HOH HOH A . G 4 HOH 4 404 12 HOH HOH A . G 4 HOH 5 405 15 HOH HOH A . G 4 HOH 6 406 16 HOH HOH A . G 4 HOH 7 407 17 HOH HOH A . G 4 HOH 8 408 24 HOH HOH A . G 4 HOH 9 409 26 HOH HOH A . G 4 HOH 10 410 29 HOH HOH A . G 4 HOH 11 411 30 HOH HOH A . G 4 HOH 12 412 32 HOH HOH A . G 4 HOH 13 413 35 HOH HOH A . G 4 HOH 14 414 36 HOH HOH A . G 4 HOH 15 415 37 HOH HOH A . G 4 HOH 16 416 40 HOH HOH A . G 4 HOH 17 417 41 HOH HOH A . G 4 HOH 18 418 42 HOH HOH A . G 4 HOH 19 419 44 HOH HOH A . G 4 HOH 20 420 47 HOH HOH A . G 4 HOH 21 421 54 HOH HOH A . G 4 HOH 22 422 55 HOH HOH A . G 4 HOH 23 423 58 HOH HOH A . G 4 HOH 24 424 59 HOH HOH A . G 4 HOH 25 425 63 HOH HOH A . G 4 HOH 26 426 65 HOH HOH A . G 4 HOH 27 427 67 HOH HOH A . G 4 HOH 28 428 69 HOH HOH A . G 4 HOH 29 429 73 HOH HOH A . G 4 HOH 30 430 74 HOH HOH A . G 4 HOH 31 431 75 HOH HOH A . G 4 HOH 32 432 76 HOH HOH A . G 4 HOH 33 433 78 HOH HOH A . G 4 HOH 34 434 79 HOH HOH A . G 4 HOH 35 435 82 HOH HOH A . G 4 HOH 36 436 83 HOH HOH A . G 4 HOH 37 437 84 HOH HOH A . G 4 HOH 38 438 85 HOH HOH A . G 4 HOH 39 439 86 HOH HOH A . G 4 HOH 40 440 89 HOH HOH A . G 4 HOH 41 441 91 HOH HOH A . G 4 HOH 42 442 93 HOH HOH A . G 4 HOH 43 443 95 HOH HOH A . G 4 HOH 44 444 97 HOH HOH A . G 4 HOH 45 445 99 HOH HOH A . G 4 HOH 46 446 100 HOH HOH A . G 4 HOH 47 447 103 HOH HOH A . G 4 HOH 48 448 104 HOH HOH A . G 4 HOH 49 449 105 HOH HOH A . G 4 HOH 50 450 106 HOH HOH A . G 4 HOH 51 451 108 HOH HOH A . G 4 HOH 52 452 113 HOH HOH A . G 4 HOH 53 453 114 HOH HOH A . G 4 HOH 54 454 115 HOH HOH A . G 4 HOH 55 455 116 HOH HOH A . G 4 HOH 56 456 117 HOH HOH A . G 4 HOH 57 457 118 HOH HOH A . G 4 HOH 58 458 119 HOH HOH A . G 4 HOH 59 459 120 HOH HOH A . G 4 HOH 60 460 123 HOH HOH A . G 4 HOH 61 461 126 HOH HOH A . G 4 HOH 62 462 128 HOH HOH A . G 4 HOH 63 463 131 HOH HOH A . G 4 HOH 64 464 133 HOH HOH A . G 4 HOH 65 465 134 HOH HOH A . G 4 HOH 66 466 139 HOH HOH A . G 4 HOH 67 467 143 HOH HOH A . G 4 HOH 68 468 145 HOH HOH A . G 4 HOH 69 469 147 HOH HOH A . G 4 HOH 70 470 148 HOH HOH A . G 4 HOH 71 471 149 HOH HOH A . G 4 HOH 72 472 156 HOH HOH A . G 4 HOH 73 473 159 HOH HOH A . G 4 HOH 74 474 161 HOH HOH A . G 4 HOH 75 475 162 HOH HOH A . G 4 HOH 76 476 164 HOH HOH A . G 4 HOH 77 477 167 HOH HOH A . G 4 HOH 78 478 168 HOH HOH A . G 4 HOH 79 479 170 HOH HOH A . G 4 HOH 80 480 174 HOH HOH A . G 4 HOH 81 481 176 HOH HOH A . G 4 HOH 82 482 183 HOH HOH A . G 4 HOH 83 483 184 HOH HOH A . G 4 HOH 84 484 185 HOH HOH A . G 4 HOH 85 485 187 HOH HOH A . G 4 HOH 86 486 190 HOH HOH A . G 4 HOH 87 487 191 HOH HOH A . G 4 HOH 88 488 195 HOH HOH A . G 4 HOH 89 489 196 HOH HOH A . G 4 HOH 90 490 197 HOH HOH A . G 4 HOH 91 491 200 HOH HOH A . G 4 HOH 92 492 202 HOH HOH A . G 4 HOH 93 493 203 HOH HOH A . G 4 HOH 94 494 204 HOH HOH A . G 4 HOH 95 495 205 HOH HOH A . G 4 HOH 96 496 210 HOH HOH A . G 4 HOH 97 497 211 HOH HOH A . G 4 HOH 98 498 212 HOH HOH A . G 4 HOH 99 499 214 HOH HOH A . G 4 HOH 100 500 215 HOH HOH A . G 4 HOH 101 501 217 HOH HOH A . G 4 HOH 102 502 218 HOH HOH A . G 4 HOH 103 503 219 HOH HOH A . G 4 HOH 104 504 220 HOH HOH A . G 4 HOH 105 505 225 HOH HOH A . G 4 HOH 106 506 226 HOH HOH A . G 4 HOH 107 507 227 HOH HOH A . G 4 HOH 108 508 228 HOH HOH A . G 4 HOH 109 509 230 HOH HOH A . G 4 HOH 110 510 234 HOH HOH A . G 4 HOH 111 511 235 HOH HOH A . G 4 HOH 112 512 236 HOH HOH A . G 4 HOH 113 513 237 HOH HOH A . G 4 HOH 114 514 241 HOH HOH A . G 4 HOH 115 515 242 HOH HOH A . G 4 HOH 116 516 243 HOH HOH A . G 4 HOH 117 517 244 HOH HOH A . G 4 HOH 118 518 1 HOH HOH A . G 4 HOH 119 519 2 HOH HOH A . G 4 HOH 120 520 3 HOH HOH A . H 4 HOH 1 401 1 HOH HOH B . H 4 HOH 2 402 2 HOH HOH B . H 4 HOH 3 403 3 HOH HOH B . H 4 HOH 4 404 4 HOH HOH B . H 4 HOH 5 405 5 HOH HOH B . H 4 HOH 6 406 6 HOH HOH B . H 4 HOH 7 407 9 HOH HOH B . H 4 HOH 8 408 10 HOH HOH B . H 4 HOH 9 409 13 HOH HOH B . H 4 HOH 10 410 14 HOH HOH B . H 4 HOH 11 411 18 HOH HOH B . H 4 HOH 12 412 19 HOH HOH B . H 4 HOH 13 413 20 HOH HOH B . H 4 HOH 14 414 21 HOH HOH B . H 4 HOH 15 415 22 HOH HOH B . H 4 HOH 16 416 23 HOH HOH B . H 4 HOH 17 417 25 HOH HOH B . H 4 HOH 18 418 27 HOH HOH B . H 4 HOH 19 419 28 HOH HOH B . H 4 HOH 20 420 31 HOH HOH B . H 4 HOH 21 421 33 HOH HOH B . H 4 HOH 22 422 34 HOH HOH B . H 4 HOH 23 423 38 HOH HOH B . H 4 HOH 24 424 39 HOH HOH B . H 4 HOH 25 425 43 HOH HOH B . H 4 HOH 26 426 45 HOH HOH B . H 4 HOH 27 427 46 HOH HOH B . H 4 HOH 28 428 48 HOH HOH B . H 4 HOH 29 429 49 HOH HOH B . H 4 HOH 30 430 50 HOH HOH B . H 4 HOH 31 431 51 HOH HOH B . H 4 HOH 32 432 52 HOH HOH B . H 4 HOH 33 433 53 HOH HOH B . H 4 HOH 34 434 56 HOH HOH B . H 4 HOH 35 435 57 HOH HOH B . H 4 HOH 36 436 60 HOH HOH B . H 4 HOH 37 437 61 HOH HOH B . H 4 HOH 38 438 62 HOH HOH B . H 4 HOH 39 439 64 HOH HOH B . H 4 HOH 40 440 66 HOH HOH B . H 4 HOH 41 441 68 HOH HOH B . H 4 HOH 42 442 70 HOH HOH B . H 4 HOH 43 443 71 HOH HOH B . H 4 HOH 44 444 72 HOH HOH B . H 4 HOH 45 445 77 HOH HOH B . H 4 HOH 46 446 80 HOH HOH B . H 4 HOH 47 447 81 HOH HOH B . H 4 HOH 48 448 87 HOH HOH B . H 4 HOH 49 449 88 HOH HOH B . H 4 HOH 50 450 90 HOH HOH B . H 4 HOH 51 451 94 HOH HOH B . H 4 HOH 52 452 96 HOH HOH B . H 4 HOH 53 453 98 HOH HOH B . H 4 HOH 54 454 101 HOH HOH B . H 4 HOH 55 455 102 HOH HOH B . H 4 HOH 56 456 107 HOH HOH B . H 4 HOH 57 457 109 HOH HOH B . H 4 HOH 58 458 110 HOH HOH B . H 4 HOH 59 459 111 HOH HOH B . H 4 HOH 60 460 112 HOH HOH B . H 4 HOH 61 461 121 HOH HOH B . H 4 HOH 62 462 122 HOH HOH B . H 4 HOH 63 463 124 HOH HOH B . H 4 HOH 64 464 125 HOH HOH B . H 4 HOH 65 465 127 HOH HOH B . H 4 HOH 66 466 129 HOH HOH B . H 4 HOH 67 467 130 HOH HOH B . H 4 HOH 68 468 132 HOH HOH B . H 4 HOH 69 469 135 HOH HOH B . H 4 HOH 70 470 136 HOH HOH B . H 4 HOH 71 471 137 HOH HOH B . H 4 HOH 72 472 138 HOH HOH B . H 4 HOH 73 473 140 HOH HOH B . H 4 HOH 74 474 141 HOH HOH B . H 4 HOH 75 475 142 HOH HOH B . H 4 HOH 76 476 144 HOH HOH B . H 4 HOH 77 477 146 HOH HOH B . H 4 HOH 78 478 150 HOH HOH B . H 4 HOH 79 479 151 HOH HOH B . H 4 HOH 80 480 152 HOH HOH B . H 4 HOH 81 481 153 HOH HOH B . H 4 HOH 82 482 154 HOH HOH B . H 4 HOH 83 483 155 HOH HOH B . H 4 HOH 84 484 157 HOH HOH B . H 4 HOH 85 485 158 HOH HOH B . H 4 HOH 86 486 160 HOH HOH B . H 4 HOH 87 487 163 HOH HOH B . H 4 HOH 88 488 169 HOH HOH B . H 4 HOH 89 489 171 HOH HOH B . H 4 HOH 90 490 172 HOH HOH B . H 4 HOH 91 491 173 HOH HOH B . H 4 HOH 92 492 175 HOH HOH B . H 4 HOH 93 493 177 HOH HOH B . H 4 HOH 94 494 178 HOH HOH B . H 4 HOH 95 495 179 HOH HOH B . H 4 HOH 96 496 180 HOH HOH B . H 4 HOH 97 497 181 HOH HOH B . H 4 HOH 98 498 182 HOH HOH B . H 4 HOH 99 499 186 HOH HOH B . H 4 HOH 100 500 188 HOH HOH B . H 4 HOH 101 501 189 HOH HOH B . H 4 HOH 102 502 192 HOH HOH B . H 4 HOH 103 503 193 HOH HOH B . H 4 HOH 104 504 194 HOH HOH B . H 4 HOH 105 505 198 HOH HOH B . H 4 HOH 106 506 199 HOH HOH B . H 4 HOH 107 507 201 HOH HOH B . H 4 HOH 108 508 206 HOH HOH B . H 4 HOH 109 509 207 HOH HOH B . H 4 HOH 110 510 208 HOH HOH B . H 4 HOH 111 511 213 HOH HOH B . H 4 HOH 112 512 216 HOH HOH B . H 4 HOH 113 513 221 HOH HOH B . H 4 HOH 114 514 222 HOH HOH B . H 4 HOH 115 515 223 HOH HOH B . H 4 HOH 116 516 224 HOH HOH B . H 4 HOH 117 517 229 HOH HOH B . H 4 HOH 118 518 231 HOH HOH B . H 4 HOH 119 519 232 HOH HOH B . H 4 HOH 120 520 233 HOH HOH B . H 4 HOH 121 521 238 HOH HOH B . H 4 HOH 122 522 239 HOH HOH B . H 4 HOH 123 523 240 HOH HOH B . H 4 HOH 124 524 245 HOH HOH B . H 4 HOH 125 525 4 HOH HOH B . H 4 HOH 126 526 5 HOH HOH B . H 4 HOH 127 527 6 HOH HOH B . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 AMoRE phasing . ? 2 REFMAC refinement 5.5.0102 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # _cell.entry_id 4DKX _cell.length_a 36.838 _cell.length_b 96.780 _cell.length_c 109.997 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4DKX _symmetry.space_group_name_H-M 'P 2 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? # _exptl.entry_id 4DKX _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.99 _exptl_crystal.density_percent_sol 38.19 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details '18% PEG 8000, 200mM Calcium acetate, 100mM Sodium cacodylate, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 110 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MAR CCD 130 mm' _diffrn_detector.pdbx_collection_date 2010-11-09 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator GRAPHITE _diffrn_radiation.pdbx_diffrn_protocol LAUE _diffrn_radiation.pdbx_scattering_type neutron # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.999 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'PAL/PLS BEAMLINE 4A' _diffrn_source.pdbx_synchrotron_site PAL/PLS _diffrn_source.pdbx_synchrotron_beamline 4A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.999 # _reflns.entry_id 4DKX _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F 2.0 _reflns.d_resolution_low 48.39 _reflns.d_resolution_high 1.9 _reflns.number_obs 31899 _reflns.number_all ? _reflns.percent_possible_obs 70 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.9 _reflns_shell.d_res_low ? _reflns_shell.percent_possible_all 70 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.number_possible ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4DKX _refine.ls_number_reflns_obs 30283 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 48.39 _refine.ls_d_res_high 1.90 _refine.ls_percent_reflns_obs 99.83 _refine.ls_R_factor_obs 0.19913 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.19644 _refine.ls_R_factor_R_free 0.25036 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 1613 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.946 _refine.correlation_coeff_Fo_to_Fc_free 0.921 _refine.B_iso_mean 29.048 _refine.aniso_B[1][1] 0.01 _refine.aniso_B[2][2] -0.01 _refine.aniso_B[3][3] 0.00 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.145 _refine.pdbx_overall_ESU_R_Free 0.147 _refine.overall_SU_ML 0.093 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 3.093 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2484 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 58 _refine_hist.number_atoms_solvent 247 _refine_hist.number_atoms_total 2789 _refine_hist.d_res_high 1.90 _refine_hist.d_res_low 48.39 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.028 0.022 ? 2587 ? 'X-RAY DIFFRACTION' r_angle_refined_deg 3.175 1.989 ? 3495 ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 6.436 5.000 ? 303 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 33.166 23.109 ? 119 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 15.633 15.000 ? 479 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 22.384 15.000 ? 25 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.188 0.200 ? 398 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.010 0.020 ? 1867 ? 'X-RAY DIFFRACTION' r_mcbond_it 1.399 1.500 ? 1520 ? 'X-RAY DIFFRACTION' r_mcangle_it 2.381 2.000 ? 2458 ? 'X-RAY DIFFRACTION' r_scbond_it 4.061 3.000 ? 1067 ? 'X-RAY DIFFRACTION' r_scangle_it 6.234 4.500 ? 1037 ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.900 _refine_ls_shell.d_res_low 1.949 _refine_ls_shell.number_reflns_R_work 2198 _refine_ls_shell.R_factor_R_work 0.229 _refine_ls_shell.percent_reflns_obs 99.78 _refine_ls_shell.R_factor_R_free 0.313 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 118 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? # _database_PDB_matrix.entry_id 4DKX _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4DKX _struct.title ;Crystal Structure of the Rab 6A'(Q72L) ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4DKX _struct_keywords.pdbx_keywords 'PROTEIN TRANSPORT' _struct_keywords.text 'GTP binding fold, Membrane trafficking, GTP, Cytosol, PROTEIN TRANSPORT' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 2 ? G N N 4 ? H N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RAB6A_HUMAN _struct_ref.pdbx_db_accession P20340 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MSTGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIP SYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAG YNVKQLFRRVAAALPGMESTQDRSREDMIDIKLEKPQEQPVSEGGCSC ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4DKX A 1 ? 208 ? P20340 1 ? 208 ? 1 208 2 1 4DKX B 1 ? 208 ? P20340 1 ? 208 ? 1 208 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4DKX ILE A 62 ? UNP P20340 VAL 62 'SEE REMARK 999' 62 1 1 4DKX LEU A 72 ? UNP P20340 GLN 72 'engineered mutation' 72 2 1 4DKX ALA A 87 ? UNP P20340 THR 87 'SEE REMARK 999' 87 3 1 4DKX ALA A 88 ? UNP P20340 VAL 88 'SEE REMARK 999' 88 4 1 4DKX LEU A 209 ? UNP P20340 ? ? 'expression tag' 209 5 1 4DKX GLU A 210 ? UNP P20340 ? ? 'expression tag' 210 6 1 4DKX HIS A 211 ? UNP P20340 ? ? 'expression tag' 211 7 1 4DKX HIS A 212 ? UNP P20340 ? ? 'expression tag' 212 8 1 4DKX HIS A 213 ? UNP P20340 ? ? 'expression tag' 213 9 1 4DKX HIS A 214 ? UNP P20340 ? ? 'expression tag' 214 10 1 4DKX HIS A 215 ? UNP P20340 ? ? 'expression tag' 215 11 1 4DKX HIS A 216 ? UNP P20340 ? ? 'expression tag' 216 12 2 4DKX ILE B 62 ? UNP P20340 VAL 62 'SEE REMARK 999' 62 13 2 4DKX LEU B 72 ? UNP P20340 GLN 72 'engineered mutation' 72 14 2 4DKX ALA B 87 ? UNP P20340 THR 87 'SEE REMARK 999' 87 15 2 4DKX ALA B 88 ? UNP P20340 VAL 88 'SEE REMARK 999' 88 16 2 4DKX LEU B 209 ? UNP P20340 ? ? 'expression tag' 209 17 2 4DKX GLU B 210 ? UNP P20340 ? ? 'expression tag' 210 18 2 4DKX HIS B 211 ? UNP P20340 ? ? 'expression tag' 211 19 2 4DKX HIS B 212 ? UNP P20340 ? ? 'expression tag' 212 20 2 4DKX HIS B 213 ? UNP P20340 ? ? 'expression tag' 213 21 2 4DKX HIS B 214 ? UNP P20340 ? ? 'expression tag' 214 22 2 4DKX HIS B 215 ? UNP P20340 ? ? 'expression tag' 215 23 2 4DKX HIS B 216 ? UNP P20340 ? ? 'expression tag' 216 24 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,G 2 1 B,E,F,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 25 ? ASP A 36 ? GLY A 25 ASP A 36 1 ? 12 HELX_P HELX_P2 2 PHE A 75 ? SER A 77 ? PHE A 75 SER A 77 5 ? 3 HELX_P HELX_P3 3 LEU A 78 ? ARG A 84 ? LEU A 78 ARG A 84 1 ? 7 HELX_P HELX_P4 4 ASN A 97 ? GLN A 103 ? ASN A 97 GLN A 103 1 ? 7 HELX_P HELX_P5 5 GLN A 103 ? GLY A 116 ? GLN A 103 GLY A 116 1 ? 14 HELX_P HELX_P6 6 LEU A 130 ? ARG A 134 ? LEU A 130 ARG A 134 5 ? 5 HELX_P HELX_P7 7 SER A 137 ? ASN A 149 ? SER A 137 ASN A 149 1 ? 13 HELX_P HELX_P8 8 ASN A 162 ? LEU A 174 ? ASN A 162 LEU A 174 1 ? 13 HELX_P HELX_P9 9 GLY B 25 ? ASP B 36 ? GLY B 25 ASP B 36 1 ? 12 HELX_P HELX_P10 10 GLY B 71 ? SER B 77 ? GLY B 71 SER B 77 5 ? 7 HELX_P HELX_P11 11 LEU B 78 ? ARG B 84 ? LEU B 78 ARG B 84 1 ? 7 HELX_P HELX_P12 12 ASN B 97 ? GLY B 116 ? ASN B 97 GLY B 116 1 ? 20 HELX_P HELX_P13 13 THR B 128 ? ARG B 134 ? THR B 128 ARG B 134 5 ? 7 HELX_P HELX_P14 14 SER B 137 ? ASN B 149 ? SER B 137 ASN B 149 1 ? 13 HELX_P HELX_P15 15 ASN B 162 ? ALA B 173 ? ASN B 162 ALA B 173 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A THR 27 OG1 ? ? ? 1_555 D MG . MG ? ? A THR 27 A MG 302 1_555 ? ? ? ? ? ? ? 2.447 ? ? metalc2 metalc ? ? C GDP . O2B ? ? ? 1_555 D MG . MG ? ? A GDP 301 A MG 302 1_555 ? ? ? ? ? ? ? 2.329 ? ? metalc3 metalc ? ? D MG . MG ? ? ? 1_555 G HOH . O ? ? A MG 302 A HOH 518 1_555 ? ? ? ? ? ? ? 2.163 ? ? metalc4 metalc ? ? D MG . MG ? ? ? 1_555 G HOH . O ? ? A MG 302 A HOH 519 1_555 ? ? ? ? ? ? ? 2.305 ? ? metalc5 metalc ? ? D MG . MG ? ? ? 1_555 G HOH . O ? ? A MG 302 A HOH 520 1_555 ? ? ? ? ? ? ? 2.503 ? ? metalc6 metalc ? ? B THR 27 OG1 ? ? ? 1_555 E MG . MG ? ? B THR 27 B MG 301 1_555 ? ? ? ? ? ? ? 2.251 ? ? metalc7 metalc ? ? E MG . MG ? ? ? 1_555 F GDP . O3B ? ? B MG 301 B GDP 302 1_555 ? ? ? ? ? ? ? 2.261 ? ? metalc8 metalc ? ? E MG . MG ? ? ? 1_555 H HOH . O ? ? B MG 301 B HOH 525 1_555 ? ? ? ? ? ? ? 2.112 ? ? metalc9 metalc ? ? E MG . MG ? ? ? 1_555 H HOH . O ? ? B MG 301 B HOH 526 1_555 ? ? ? ? ? ? ? 2.265 ? ? metalc10 metalc ? ? E MG . MG ? ? ? 1_555 H HOH . O ? ? B MG 301 B HOH 527 1_555 ? ? ? ? ? ? ? 2.333 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OG1 ? A THR 27 ? A THR 27 ? 1_555 MG ? D MG . ? A MG 302 ? 1_555 O2B ? C GDP . ? A GDP 301 ? 1_555 84.1 ? 2 OG1 ? A THR 27 ? A THR 27 ? 1_555 MG ? D MG . ? A MG 302 ? 1_555 O ? G HOH . ? A HOH 518 ? 1_555 83.9 ? 3 O2B ? C GDP . ? A GDP 301 ? 1_555 MG ? D MG . ? A MG 302 ? 1_555 O ? G HOH . ? A HOH 518 ? 1_555 83.7 ? 4 OG1 ? A THR 27 ? A THR 27 ? 1_555 MG ? D MG . ? A MG 302 ? 1_555 O ? G HOH . ? A HOH 519 ? 1_555 170.6 ? 5 O2B ? C GDP . ? A GDP 301 ? 1_555 MG ? D MG . ? A MG 302 ? 1_555 O ? G HOH . ? A HOH 519 ? 1_555 86.5 ? 6 O ? G HOH . ? A HOH 518 ? 1_555 MG ? D MG . ? A MG 302 ? 1_555 O ? G HOH . ? A HOH 519 ? 1_555 94.8 ? 7 OG1 ? A THR 27 ? A THR 27 ? 1_555 MG ? D MG . ? A MG 302 ? 1_555 O ? G HOH . ? A HOH 520 ? 1_555 85.5 ? 8 O2B ? C GDP . ? A GDP 301 ? 1_555 MG ? D MG . ? A MG 302 ? 1_555 O ? G HOH . ? A HOH 520 ? 1_555 93.1 ? 9 O ? G HOH . ? A HOH 518 ? 1_555 MG ? D MG . ? A MG 302 ? 1_555 O ? G HOH . ? A HOH 520 ? 1_555 169.2 ? 10 O ? G HOH . ? A HOH 519 ? 1_555 MG ? D MG . ? A MG 302 ? 1_555 O ? G HOH . ? A HOH 520 ? 1_555 95.3 ? 11 OG1 ? B THR 27 ? B THR 27 ? 1_555 MG ? E MG . ? B MG 301 ? 1_555 O3B ? F GDP . ? B GDP 302 ? 1_555 80.6 ? 12 OG1 ? B THR 27 ? B THR 27 ? 1_555 MG ? E MG . ? B MG 301 ? 1_555 O ? H HOH . ? B HOH 525 ? 1_555 84.3 ? 13 O3B ? F GDP . ? B GDP 302 ? 1_555 MG ? E MG . ? B MG 301 ? 1_555 O ? H HOH . ? B HOH 525 ? 1_555 82.9 ? 14 OG1 ? B THR 27 ? B THR 27 ? 1_555 MG ? E MG . ? B MG 301 ? 1_555 O ? H HOH . ? B HOH 526 ? 1_555 172.7 ? 15 O3B ? F GDP . ? B GDP 302 ? 1_555 MG ? E MG . ? B MG 301 ? 1_555 O ? H HOH . ? B HOH 526 ? 1_555 92.7 ? 16 O ? H HOH . ? B HOH 525 ? 1_555 MG ? E MG . ? B MG 301 ? 1_555 O ? H HOH . ? B HOH 526 ? 1_555 97.5 ? 17 OG1 ? B THR 27 ? B THR 27 ? 1_555 MG ? E MG . ? B MG 301 ? 1_555 O ? H HOH . ? B HOH 527 ? 1_555 83.1 ? 18 O3B ? F GDP . ? B GDP 302 ? 1_555 MG ? E MG . ? B MG 301 ? 1_555 O ? H HOH . ? B HOH 527 ? 1_555 89.4 ? 19 O ? H HOH . ? B HOH 525 ? 1_555 MG ? E MG . ? B MG 301 ? 1_555 O ? H HOH . ? B HOH 527 ? 1_555 166.2 ? 20 O ? H HOH . ? B HOH 526 ? 1_555 MG ? E MG . ? B MG 301 ? 1_555 O ? H HOH . ? B HOH 527 ? 1_555 94.3 ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel B 1 2 ? anti-parallel B 2 3 ? parallel B 3 4 ? parallel B 4 5 ? parallel B 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 51 ? TYR A 56 ? LEU A 51 TYR A 56 A 2 THR A 61 ? TRP A 67 ? THR A 61 TRP A 67 A 3 PHE A 14 ? LEU A 19 ? PHE A 14 LEU A 19 A 4 ALA A 88 ? ASP A 94 ? ALA A 88 ASP A 94 A 5 ILE A 120 ? ASN A 126 ? ILE A 120 ASN A 126 A 6 MET A 151 ? THR A 155 ? MET A 151 THR A 155 B 1 ASP B 49 ? LEU B 57 ? ASP B 49 LEU B 57 B 2 ARG B 60 ? ASP B 68 ? ARG B 60 ASP B 68 B 3 LYS B 13 ? GLY B 20 ? LYS B 13 GLY B 20 B 4 ALA B 88 ? ASP B 94 ? ALA B 88 ASP B 94 B 5 ILE B 120 ? ASN B 126 ? ILE B 120 ASN B 126 B 6 MET B 151 ? THR B 155 ? MET B 151 THR B 155 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N MET A 55 ? N MET A 55 O ILE A 62 ? O ILE A 62 A 2 3 O GLN A 65 ? O GLN A 65 N PHE A 14 ? N PHE A 14 A 3 4 N LEU A 19 ? N LEU A 19 O VAL A 92 ? O VAL A 92 A 4 5 N TYR A 93 ? N TYR A 93 O ASN A 126 ? O ASN A 126 A 5 6 N LEU A 123 ? N LEU A 123 O MET A 151 ? O MET A 151 B 1 2 N MET B 55 ? N MET B 55 O ILE B 62 ? O ILE B 62 B 2 3 O GLN B 65 ? O GLN B 65 N PHE B 14 ? N PHE B 14 B 3 4 N LEU B 19 ? N LEU B 19 O VAL B 92 ? O VAL B 92 B 4 5 N TYR B 93 ? N TYR B 93 O ASN B 126 ? O ASN B 126 B 5 6 N LEU B 123 ? N LEU B 123 O MET B 151 ? O MET B 151 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A GDP 301 ? 19 'BINDING SITE FOR RESIDUE GDP A 301' AC2 Software A MG 302 ? 5 'BINDING SITE FOR RESIDUE MG A 302' AC3 Software B MG 301 ? 5 'BINDING SITE FOR RESIDUE MG B 301' AC4 Software B GDP 302 ? 19 'BINDING SITE FOR RESIDUE GDP B 302' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 19 SER A 23 ? SER A 23 . ? 1_555 ? 2 AC1 19 VAL A 24 ? VAL A 24 . ? 1_555 ? 3 AC1 19 GLY A 25 ? GLY A 25 . ? 1_555 ? 4 AC1 19 LYS A 26 ? LYS A 26 . ? 1_555 ? 5 AC1 19 THR A 27 ? THR A 27 . ? 1_555 ? 6 AC1 19 SER A 28 ? SER A 28 . ? 1_555 ? 7 AC1 19 PHE A 38 ? PHE A 38 . ? 1_555 ? 8 AC1 19 ASP A 39 ? ASP A 39 . ? 1_555 ? 9 AC1 19 ASN A 126 ? ASN A 126 . ? 1_555 ? 10 AC1 19 LYS A 127 ? LYS A 127 . ? 1_555 ? 11 AC1 19 ASP A 129 ? ASP A 129 . ? 1_555 ? 12 AC1 19 LEU A 130 ? LEU A 130 . ? 1_555 ? 13 AC1 19 SER A 156 ? SER A 156 . ? 1_555 ? 14 AC1 19 ALA A 157 ? ALA A 157 . ? 1_555 ? 15 AC1 19 LYS A 158 ? LYS A 158 . ? 1_555 ? 16 AC1 19 MG D . ? MG A 302 . ? 1_555 ? 17 AC1 19 HOH G . ? HOH A 454 . ? 1_555 ? 18 AC1 19 HOH G . ? HOH A 518 . ? 1_555 ? 19 AC1 19 HOH G . ? HOH A 519 . ? 1_555 ? 20 AC2 5 THR A 27 ? THR A 27 . ? 1_555 ? 21 AC2 5 GDP C . ? GDP A 301 . ? 1_555 ? 22 AC2 5 HOH G . ? HOH A 518 . ? 1_555 ? 23 AC2 5 HOH G . ? HOH A 519 . ? 1_555 ? 24 AC2 5 HOH G . ? HOH A 520 . ? 1_555 ? 25 AC3 5 THR B 27 ? THR B 27 . ? 1_555 ? 26 AC3 5 GDP F . ? GDP B 302 . ? 1_555 ? 27 AC3 5 HOH H . ? HOH B 525 . ? 1_555 ? 28 AC3 5 HOH H . ? HOH B 526 . ? 1_555 ? 29 AC3 5 HOH H . ? HOH B 527 . ? 1_555 ? 30 AC4 19 SER B 23 ? SER B 23 . ? 1_555 ? 31 AC4 19 VAL B 24 ? VAL B 24 . ? 1_555 ? 32 AC4 19 GLY B 25 ? GLY B 25 . ? 1_555 ? 33 AC4 19 LYS B 26 ? LYS B 26 . ? 1_555 ? 34 AC4 19 THR B 27 ? THR B 27 . ? 1_555 ? 35 AC4 19 SER B 28 ? SER B 28 . ? 1_555 ? 36 AC4 19 PHE B 38 ? PHE B 38 . ? 1_555 ? 37 AC4 19 ASN B 126 ? ASN B 126 . ? 1_555 ? 38 AC4 19 LYS B 127 ? LYS B 127 . ? 1_555 ? 39 AC4 19 ASP B 129 ? ASP B 129 . ? 1_555 ? 40 AC4 19 LEU B 130 ? LEU B 130 . ? 1_555 ? 41 AC4 19 SER B 156 ? SER B 156 . ? 1_555 ? 42 AC4 19 ALA B 157 ? ALA B 157 . ? 1_555 ? 43 AC4 19 LYS B 158 ? LYS B 158 . ? 1_555 ? 44 AC4 19 MG E . ? MG B 301 . ? 1_555 ? 45 AC4 19 HOH H . ? HOH B 410 . ? 1_555 ? 46 AC4 19 HOH H . ? HOH B 480 . ? 1_555 ? 47 AC4 19 HOH H . ? HOH B 525 . ? 1_555 ? 48 AC4 19 HOH H . ? HOH B 526 . ? 1_555 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 C A LEU 174 ? ? O A HOH 494 ? ? 1.90 2 1 OD1 B ASP 85 ? ? O B HOH 468 ? ? 1.96 3 1 N A PHE 50 ? ? O A HOH 437 ? ? 2.01 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 OD1 _pdbx_validate_symm_contact.auth_asym_id_1 B _pdbx_validate_symm_contact.auth_comp_id_1 ASP _pdbx_validate_symm_contact.auth_seq_id_1 49 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 515 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 4_654 _pdbx_validate_symm_contact.dist 2.08 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CZ A ARG 112 ? ? NH2 A ARG 112 ? ? 1.418 1.326 0.092 0.013 N 2 1 CG A GLU 140 ? ? CD A GLU 140 ? ? 1.629 1.515 0.114 0.015 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 C A ARG 84 ? ? N A ASP 85 ? ? CA A ASP 85 ? ? 104.48 121.70 -17.22 2.50 Y 2 1 NE A ARG 112 ? ? CZ A ARG 112 ? ? NH1 A ARG 112 ? ? 115.23 120.30 -5.07 0.50 N 3 1 CG1 B VAL 17 ? ? CB B VAL 17 ? ? CG2 B VAL 17 ? ? 123.49 110.90 12.59 1.60 N 4 1 O B ARG 84 ? ? C B ARG 84 ? ? N B ASP 85 ? ? 112.72 122.70 -9.98 1.60 Y 5 1 C B ARG 84 ? ? N B ASP 85 ? ? CA B ASP 85 ? ? 94.86 121.70 -26.84 2.50 Y 6 1 CB B ASP 94 ? ? CG B ASP 94 ? ? OD1 B ASP 94 ? ? 124.91 118.30 6.61 0.90 N 7 1 NE B ARG 143 ? ? CZ B ARG 143 ? ? NH1 B ARG 143 ? ? 114.14 120.30 -6.16 0.50 N 8 1 NE B ARG 143 ? ? CZ B ARG 143 ? ? NH2 B ARG 143 ? ? 128.33 120.30 8.03 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 23 ? ? 83.29 10.71 2 1 PHE A 75 ? ? -112.95 64.52 3 1 ASP A 118 ? ? -84.32 49.73 4 1 LYS A 127 ? ? 77.59 34.68 5 1 ASP B 36 ? ? 39.79 53.27 6 1 LYS B 127 ? ? 79.95 36.00 7 1 LEU B 130 ? ? -97.44 45.77 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 439 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id G _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # _pdbx_entry_details.entry_id 4DKX _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;RESIDUES 62-88 ARE BASED ON ISOFORM 2 OF RAB6A_HUMAN (P20340). RESIDUES 62, 87 AND 88 ARE ILE, ALA AND ALA RESPECTIVELY IN ISOFORM 2. ; _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A SER 2 ? A SER 2 3 1 Y 1 A THR 3 ? A THR 3 4 1 Y 1 A GLY 4 ? A GLY 4 5 1 Y 1 A GLY 5 ? A GLY 5 6 1 Y 1 A ASP 6 ? A ASP 6 7 1 Y 1 A PHE 7 ? A PHE 7 8 1 Y 1 A GLY 8 ? A GLY 8 9 1 Y 1 A ASN 9 ? A ASN 9 10 1 Y 1 A PRO 10 ? A PRO 10 11 1 Y 1 A LEU 11 ? A LEU 11 12 1 Y 1 A ARG 12 ? A ARG 12 13 1 Y 1 A ASN 40 ? A ASN 40 14 1 Y 1 A THR 41 ? A THR 41 15 1 Y 1 A TYR 42 ? A TYR 42 16 1 Y 1 A GLN 43 ? A GLN 43 17 1 Y 1 A ALA 44 ? A ALA 44 18 1 Y 1 A THR 45 ? A THR 45 19 1 Y 1 A ILE 46 ? A ILE 46 20 1 Y 1 A GLY 47 ? A GLY 47 21 1 Y 1 A ILE 48 ? A ILE 48 22 1 Y 1 A ASP 49 ? A ASP 49 23 1 Y 1 A PRO 175 ? A PRO 175 24 1 Y 1 A GLY 176 ? A GLY 176 25 1 Y 1 A MET 177 ? A MET 177 26 1 Y 1 A GLU 178 ? A GLU 178 27 1 Y 1 A SER 179 ? A SER 179 28 1 Y 1 A THR 180 ? A THR 180 29 1 Y 1 A GLN 181 ? A GLN 181 30 1 Y 1 A ASP 182 ? A ASP 182 31 1 Y 1 A ARG 183 ? A ARG 183 32 1 Y 1 A SER 184 ? A SER 184 33 1 Y 1 A ARG 185 ? A ARG 185 34 1 Y 1 A GLU 186 ? A GLU 186 35 1 Y 1 A ASP 187 ? A ASP 187 36 1 Y 1 A MET 188 ? A MET 188 37 1 Y 1 A ILE 189 ? A ILE 189 38 1 Y 1 A ASP 190 ? A ASP 190 39 1 Y 1 A ILE 191 ? A ILE 191 40 1 Y 1 A LYS 192 ? A LYS 192 41 1 Y 1 A LEU 193 ? A LEU 193 42 1 Y 1 A GLU 194 ? A GLU 194 43 1 Y 1 A LYS 195 ? A LYS 195 44 1 Y 1 A PRO 196 ? A PRO 196 45 1 Y 1 A GLN 197 ? A GLN 197 46 1 Y 1 A GLU 198 ? A GLU 198 47 1 Y 1 A GLN 199 ? A GLN 199 48 1 Y 1 A PRO 200 ? A PRO 200 49 1 Y 1 A VAL 201 ? A VAL 201 50 1 Y 1 A SER 202 ? A SER 202 51 1 Y 1 A GLU 203 ? A GLU 203 52 1 Y 1 A GLY 204 ? A GLY 204 53 1 Y 1 A GLY 205 ? A GLY 205 54 1 Y 1 A CYS 206 ? A CYS 206 55 1 Y 1 A SER 207 ? A SER 207 56 1 Y 1 A CYS 208 ? A CYS 208 57 1 Y 1 A LEU 209 ? A LEU 209 58 1 Y 1 A GLU 210 ? A GLU 210 59 1 Y 1 A HIS 211 ? A HIS 211 60 1 Y 1 A HIS 212 ? A HIS 212 61 1 Y 1 A HIS 213 ? A HIS 213 62 1 Y 1 A HIS 214 ? A HIS 214 63 1 Y 1 A HIS 215 ? A HIS 215 64 1 Y 1 A HIS 216 ? A HIS 216 65 1 Y 1 B MET 1 ? B MET 1 66 1 Y 1 B SER 2 ? B SER 2 67 1 Y 1 B THR 3 ? B THR 3 68 1 Y 1 B GLY 4 ? B GLY 4 69 1 Y 1 B GLY 5 ? B GLY 5 70 1 Y 1 B ASP 6 ? B ASP 6 71 1 Y 1 B PHE 7 ? B PHE 7 72 1 Y 1 B GLY 8 ? B GLY 8 73 1 Y 1 B ASN 9 ? B ASN 9 74 1 Y 1 B PRO 10 ? B PRO 10 75 1 Y 1 B LEU 11 ? B LEU 11 76 1 Y 1 B ASP 39 ? B ASP 39 77 1 Y 1 B ASN 40 ? B ASN 40 78 1 Y 1 B THR 41 ? B THR 41 79 1 Y 1 B TYR 42 ? B TYR 42 80 1 Y 1 B GLN 43 ? B GLN 43 81 1 Y 1 B ALA 44 ? B ALA 44 82 1 Y 1 B THR 45 ? B THR 45 83 1 Y 1 B ILE 46 ? B ILE 46 84 1 Y 1 B GLY 47 ? B GLY 47 85 1 Y 1 B GLY 176 ? B GLY 176 86 1 Y 1 B MET 177 ? B MET 177 87 1 Y 1 B GLU 178 ? B GLU 178 88 1 Y 1 B SER 179 ? B SER 179 89 1 Y 1 B THR 180 ? B THR 180 90 1 Y 1 B GLN 181 ? B GLN 181 91 1 Y 1 B ASP 182 ? B ASP 182 92 1 Y 1 B ARG 183 ? B ARG 183 93 1 Y 1 B SER 184 ? B SER 184 94 1 Y 1 B ARG 185 ? B ARG 185 95 1 Y 1 B GLU 186 ? B GLU 186 96 1 Y 1 B ASP 187 ? B ASP 187 97 1 Y 1 B MET 188 ? B MET 188 98 1 Y 1 B ILE 189 ? B ILE 189 99 1 Y 1 B ASP 190 ? B ASP 190 100 1 Y 1 B ILE 191 ? B ILE 191 101 1 Y 1 B LYS 192 ? B LYS 192 102 1 Y 1 B LEU 193 ? B LEU 193 103 1 Y 1 B GLU 194 ? B GLU 194 104 1 Y 1 B LYS 195 ? B LYS 195 105 1 Y 1 B PRO 196 ? B PRO 196 106 1 Y 1 B GLN 197 ? B GLN 197 107 1 Y 1 B GLU 198 ? B GLU 198 108 1 Y 1 B GLN 199 ? B GLN 199 109 1 Y 1 B PRO 200 ? B PRO 200 110 1 Y 1 B VAL 201 ? B VAL 201 111 1 Y 1 B SER 202 ? B SER 202 112 1 Y 1 B GLU 203 ? B GLU 203 113 1 Y 1 B GLY 204 ? B GLY 204 114 1 Y 1 B GLY 205 ? B GLY 205 115 1 Y 1 B CYS 206 ? B CYS 206 116 1 Y 1 B SER 207 ? B SER 207 117 1 Y 1 B CYS 208 ? B CYS 208 118 1 Y 1 B LEU 209 ? B LEU 209 119 1 Y 1 B GLU 210 ? B GLU 210 120 1 Y 1 B HIS 211 ? B HIS 211 121 1 Y 1 B HIS 212 ? B HIS 212 122 1 Y 1 B HIS 213 ? B HIS 213 123 1 Y 1 B HIS 214 ? B HIS 214 124 1 Y 1 B HIS 215 ? B HIS 215 125 1 Y 1 B HIS 216 ? B HIS 216 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GDP PB P N N 88 GDP O1B O N N 89 GDP O2B O N N 90 GDP O3B O N N 91 GDP O3A O N N 92 GDP PA P N N 93 GDP O1A O N N 94 GDP O2A O N N 95 GDP "O5'" O N N 96 GDP "C5'" C N N 97 GDP "C4'" C N R 98 GDP "O4'" O N N 99 GDP "C3'" C N S 100 GDP "O3'" O N N 101 GDP "C2'" C N R 102 GDP "O2'" O N N 103 GDP "C1'" C N R 104 GDP N9 N Y N 105 GDP C8 C Y N 106 GDP N7 N Y N 107 GDP C5 C Y N 108 GDP C6 C N N 109 GDP O6 O N N 110 GDP N1 N N N 111 GDP C2 C N N 112 GDP N2 N N N 113 GDP N3 N N N 114 GDP C4 C Y N 115 GDP HOB2 H N N 116 GDP HOB3 H N N 117 GDP HOA2 H N N 118 GDP "H5'" H N N 119 GDP "H5''" H N N 120 GDP "H4'" H N N 121 GDP "H3'" H N N 122 GDP "HO3'" H N N 123 GDP "H2'" H N N 124 GDP "HO2'" H N N 125 GDP "H1'" H N N 126 GDP H8 H N N 127 GDP HN1 H N N 128 GDP HN21 H N N 129 GDP HN22 H N N 130 GLN N N N N 131 GLN CA C N S 132 GLN C C N N 133 GLN O O N N 134 GLN CB C N N 135 GLN CG C N N 136 GLN CD C N N 137 GLN OE1 O N N 138 GLN NE2 N N N 139 GLN OXT O N N 140 GLN H H N N 141 GLN H2 H N N 142 GLN HA H N N 143 GLN HB2 H N N 144 GLN HB3 H N N 145 GLN HG2 H N N 146 GLN HG3 H N N 147 GLN HE21 H N N 148 GLN HE22 H N N 149 GLN HXT H N N 150 GLU N N N N 151 GLU CA C N S 152 GLU C C N N 153 GLU O O N N 154 GLU CB C N N 155 GLU CG C N N 156 GLU CD C N N 157 GLU OE1 O N N 158 GLU OE2 O N N 159 GLU OXT O N N 160 GLU H H N N 161 GLU H2 H N N 162 GLU HA H N N 163 GLU HB2 H N N 164 GLU HB3 H N N 165 GLU HG2 H N N 166 GLU HG3 H N N 167 GLU HE2 H N N 168 GLU HXT H N N 169 GLY N N N N 170 GLY CA C N N 171 GLY C C N N 172 GLY O O N N 173 GLY OXT O N N 174 GLY H H N N 175 GLY H2 H N N 176 GLY HA2 H N N 177 GLY HA3 H N N 178 GLY HXT H N N 179 HIS N N N N 180 HIS CA C N S 181 HIS C C N N 182 HIS O O N N 183 HIS CB C N N 184 HIS CG C Y N 185 HIS ND1 N Y N 186 HIS CD2 C Y N 187 HIS CE1 C Y N 188 HIS NE2 N Y N 189 HIS OXT O N N 190 HIS H H N N 191 HIS H2 H N N 192 HIS HA H N N 193 HIS HB2 H N N 194 HIS HB3 H N N 195 HIS HD1 H N N 196 HIS HD2 H N N 197 HIS HE1 H N N 198 HIS HE2 H N N 199 HIS HXT H N N 200 HOH O O N N 201 HOH H1 H N N 202 HOH H2 H N N 203 ILE N N N N 204 ILE CA C N S 205 ILE C C N N 206 ILE O O N N 207 ILE CB C N S 208 ILE CG1 C N N 209 ILE CG2 C N N 210 ILE CD1 C N N 211 ILE OXT O N N 212 ILE H H N N 213 ILE H2 H N N 214 ILE HA H N N 215 ILE HB H N N 216 ILE HG12 H N N 217 ILE HG13 H N N 218 ILE HG21 H N N 219 ILE HG22 H N N 220 ILE HG23 H N N 221 ILE HD11 H N N 222 ILE HD12 H N N 223 ILE HD13 H N N 224 ILE HXT H N N 225 LEU N N N N 226 LEU CA C N S 227 LEU C C N N 228 LEU O O N N 229 LEU CB C N N 230 LEU CG C N N 231 LEU CD1 C N N 232 LEU CD2 C N N 233 LEU OXT O N N 234 LEU H H N N 235 LEU H2 H N N 236 LEU HA H N N 237 LEU HB2 H N N 238 LEU HB3 H N N 239 LEU HG H N N 240 LEU HD11 H N N 241 LEU HD12 H N N 242 LEU HD13 H N N 243 LEU HD21 H N N 244 LEU HD22 H N N 245 LEU HD23 H N N 246 LEU HXT H N N 247 LYS N N N N 248 LYS CA C N S 249 LYS C C N N 250 LYS O O N N 251 LYS CB C N N 252 LYS CG C N N 253 LYS CD C N N 254 LYS CE C N N 255 LYS NZ N N N 256 LYS OXT O N N 257 LYS H H N N 258 LYS H2 H N N 259 LYS HA H N N 260 LYS HB2 H N N 261 LYS HB3 H N N 262 LYS HG2 H N N 263 LYS HG3 H N N 264 LYS HD2 H N N 265 LYS HD3 H N N 266 LYS HE2 H N N 267 LYS HE3 H N N 268 LYS HZ1 H N N 269 LYS HZ2 H N N 270 LYS HZ3 H N N 271 LYS HXT H N N 272 MET N N N N 273 MET CA C N S 274 MET C C N N 275 MET O O N N 276 MET CB C N N 277 MET CG C N N 278 MET SD S N N 279 MET CE C N N 280 MET OXT O N N 281 MET H H N N 282 MET H2 H N N 283 MET HA H N N 284 MET HB2 H N N 285 MET HB3 H N N 286 MET HG2 H N N 287 MET HG3 H N N 288 MET HE1 H N N 289 MET HE2 H N N 290 MET HE3 H N N 291 MET HXT H N N 292 MG MG MG N N 293 PHE N N N N 294 PHE CA C N S 295 PHE C C N N 296 PHE O O N N 297 PHE CB C N N 298 PHE CG C Y N 299 PHE CD1 C Y N 300 PHE CD2 C Y N 301 PHE CE1 C Y N 302 PHE CE2 C Y N 303 PHE CZ C Y N 304 PHE OXT O N N 305 PHE H H N N 306 PHE H2 H N N 307 PHE HA H N N 308 PHE HB2 H N N 309 PHE HB3 H N N 310 PHE HD1 H N N 311 PHE HD2 H N N 312 PHE HE1 H N N 313 PHE HE2 H N N 314 PHE HZ H N N 315 PHE HXT H N N 316 PRO N N N N 317 PRO CA C N S 318 PRO C C N N 319 PRO O O N N 320 PRO CB C N N 321 PRO CG C N N 322 PRO CD C N N 323 PRO OXT O N N 324 PRO H H N N 325 PRO HA H N N 326 PRO HB2 H N N 327 PRO HB3 H N N 328 PRO HG2 H N N 329 PRO HG3 H N N 330 PRO HD2 H N N 331 PRO HD3 H N N 332 PRO HXT H N N 333 SER N N N N 334 SER CA C N S 335 SER C C N N 336 SER O O N N 337 SER CB C N N 338 SER OG O N N 339 SER OXT O N N 340 SER H H N N 341 SER H2 H N N 342 SER HA H N N 343 SER HB2 H N N 344 SER HB3 H N N 345 SER HG H N N 346 SER HXT H N N 347 THR N N N N 348 THR CA C N S 349 THR C C N N 350 THR O O N N 351 THR CB C N R 352 THR OG1 O N N 353 THR CG2 C N N 354 THR OXT O N N 355 THR H H N N 356 THR H2 H N N 357 THR HA H N N 358 THR HB H N N 359 THR HG1 H N N 360 THR HG21 H N N 361 THR HG22 H N N 362 THR HG23 H N N 363 THR HXT H N N 364 TRP N N N N 365 TRP CA C N S 366 TRP C C N N 367 TRP O O N N 368 TRP CB C N N 369 TRP CG C Y N 370 TRP CD1 C Y N 371 TRP CD2 C Y N 372 TRP NE1 N Y N 373 TRP CE2 C Y N 374 TRP CE3 C Y N 375 TRP CZ2 C Y N 376 TRP CZ3 C Y N 377 TRP CH2 C Y N 378 TRP OXT O N N 379 TRP H H N N 380 TRP H2 H N N 381 TRP HA H N N 382 TRP HB2 H N N 383 TRP HB3 H N N 384 TRP HD1 H N N 385 TRP HE1 H N N 386 TRP HE3 H N N 387 TRP HZ2 H N N 388 TRP HZ3 H N N 389 TRP HH2 H N N 390 TRP HXT H N N 391 TYR N N N N 392 TYR CA C N S 393 TYR C C N N 394 TYR O O N N 395 TYR CB C N N 396 TYR CG C Y N 397 TYR CD1 C Y N 398 TYR CD2 C Y N 399 TYR CE1 C Y N 400 TYR CE2 C Y N 401 TYR CZ C Y N 402 TYR OH O N N 403 TYR OXT O N N 404 TYR H H N N 405 TYR H2 H N N 406 TYR HA H N N 407 TYR HB2 H N N 408 TYR HB3 H N N 409 TYR HD1 H N N 410 TYR HD2 H N N 411 TYR HE1 H N N 412 TYR HE2 H N N 413 TYR HH H N N 414 TYR HXT H N N 415 VAL N N N N 416 VAL CA C N S 417 VAL C C N N 418 VAL O O N N 419 VAL CB C N N 420 VAL CG1 C N N 421 VAL CG2 C N N 422 VAL OXT O N N 423 VAL H H N N 424 VAL H2 H N N 425 VAL HA H N N 426 VAL HB H N N 427 VAL HG11 H N N 428 VAL HG12 H N N 429 VAL HG13 H N N 430 VAL HG21 H N N 431 VAL HG22 H N N 432 VAL HG23 H N N 433 VAL HXT H N N 434 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GDP PB O1B doub N N 83 GDP PB O2B sing N N 84 GDP PB O3B sing N N 85 GDP PB O3A sing N N 86 GDP O2B HOB2 sing N N 87 GDP O3B HOB3 sing N N 88 GDP O3A PA sing N N 89 GDP PA O1A doub N N 90 GDP PA O2A sing N N 91 GDP PA "O5'" sing N N 92 GDP O2A HOA2 sing N N 93 GDP "O5'" "C5'" sing N N 94 GDP "C5'" "C4'" sing N N 95 GDP "C5'" "H5'" sing N N 96 GDP "C5'" "H5''" sing N N 97 GDP "C4'" "O4'" sing N N 98 GDP "C4'" "C3'" sing N N 99 GDP "C4'" "H4'" sing N N 100 GDP "O4'" "C1'" sing N N 101 GDP "C3'" "O3'" sing N N 102 GDP "C3'" "C2'" sing N N 103 GDP "C3'" "H3'" sing N N 104 GDP "O3'" "HO3'" sing N N 105 GDP "C2'" "O2'" sing N N 106 GDP "C2'" "C1'" sing N N 107 GDP "C2'" "H2'" sing N N 108 GDP "O2'" "HO2'" sing N N 109 GDP "C1'" N9 sing N N 110 GDP "C1'" "H1'" sing N N 111 GDP N9 C8 sing Y N 112 GDP N9 C4 sing Y N 113 GDP C8 N7 doub Y N 114 GDP C8 H8 sing N N 115 GDP N7 C5 sing Y N 116 GDP C5 C6 sing N N 117 GDP C5 C4 doub Y N 118 GDP C6 O6 doub N N 119 GDP C6 N1 sing N N 120 GDP N1 C2 sing N N 121 GDP N1 HN1 sing N N 122 GDP C2 N2 sing N N 123 GDP C2 N3 doub N N 124 GDP N2 HN21 sing N N 125 GDP N2 HN22 sing N N 126 GDP N3 C4 sing N N 127 GLN N CA sing N N 128 GLN N H sing N N 129 GLN N H2 sing N N 130 GLN CA C sing N N 131 GLN CA CB sing N N 132 GLN CA HA sing N N 133 GLN C O doub N N 134 GLN C OXT sing N N 135 GLN CB CG sing N N 136 GLN CB HB2 sing N N 137 GLN CB HB3 sing N N 138 GLN CG CD sing N N 139 GLN CG HG2 sing N N 140 GLN CG HG3 sing N N 141 GLN CD OE1 doub N N 142 GLN CD NE2 sing N N 143 GLN NE2 HE21 sing N N 144 GLN NE2 HE22 sing N N 145 GLN OXT HXT sing N N 146 GLU N CA sing N N 147 GLU N H sing N N 148 GLU N H2 sing N N 149 GLU CA C sing N N 150 GLU CA CB sing N N 151 GLU CA HA sing N N 152 GLU C O doub N N 153 GLU C OXT sing N N 154 GLU CB CG sing N N 155 GLU CB HB2 sing N N 156 GLU CB HB3 sing N N 157 GLU CG CD sing N N 158 GLU CG HG2 sing N N 159 GLU CG HG3 sing N N 160 GLU CD OE1 doub N N 161 GLU CD OE2 sing N N 162 GLU OE2 HE2 sing N N 163 GLU OXT HXT sing N N 164 GLY N CA sing N N 165 GLY N H sing N N 166 GLY N H2 sing N N 167 GLY CA C sing N N 168 GLY CA HA2 sing N N 169 GLY CA HA3 sing N N 170 GLY C O doub N N 171 GLY C OXT sing N N 172 GLY OXT HXT sing N N 173 HIS N CA sing N N 174 HIS N H sing N N 175 HIS N H2 sing N N 176 HIS CA C sing N N 177 HIS CA CB sing N N 178 HIS CA HA sing N N 179 HIS C O doub N N 180 HIS C OXT sing N N 181 HIS CB CG sing N N 182 HIS CB HB2 sing N N 183 HIS CB HB3 sing N N 184 HIS CG ND1 sing Y N 185 HIS CG CD2 doub Y N 186 HIS ND1 CE1 doub Y N 187 HIS ND1 HD1 sing N N 188 HIS CD2 NE2 sing Y N 189 HIS CD2 HD2 sing N N 190 HIS CE1 NE2 sing Y N 191 HIS CE1 HE1 sing N N 192 HIS NE2 HE2 sing N N 193 HIS OXT HXT sing N N 194 HOH O H1 sing N N 195 HOH O H2 sing N N 196 ILE N CA sing N N 197 ILE N H sing N N 198 ILE N H2 sing N N 199 ILE CA C sing N N 200 ILE CA CB sing N N 201 ILE CA HA sing N N 202 ILE C O doub N N 203 ILE C OXT sing N N 204 ILE CB CG1 sing N N 205 ILE CB CG2 sing N N 206 ILE CB HB sing N N 207 ILE CG1 CD1 sing N N 208 ILE CG1 HG12 sing N N 209 ILE CG1 HG13 sing N N 210 ILE CG2 HG21 sing N N 211 ILE CG2 HG22 sing N N 212 ILE CG2 HG23 sing N N 213 ILE CD1 HD11 sing N N 214 ILE CD1 HD12 sing N N 215 ILE CD1 HD13 sing N N 216 ILE OXT HXT sing N N 217 LEU N CA sing N N 218 LEU N H sing N N 219 LEU N H2 sing N N 220 LEU CA C sing N N 221 LEU CA CB sing N N 222 LEU CA HA sing N N 223 LEU C O doub N N 224 LEU C OXT sing N N 225 LEU CB CG sing N N 226 LEU CB HB2 sing N N 227 LEU CB HB3 sing N N 228 LEU CG CD1 sing N N 229 LEU CG CD2 sing N N 230 LEU CG HG sing N N 231 LEU CD1 HD11 sing N N 232 LEU CD1 HD12 sing N N 233 LEU CD1 HD13 sing N N 234 LEU CD2 HD21 sing N N 235 LEU CD2 HD22 sing N N 236 LEU CD2 HD23 sing N N 237 LEU OXT HXT sing N N 238 LYS N CA sing N N 239 LYS N H sing N N 240 LYS N H2 sing N N 241 LYS CA C sing N N 242 LYS CA CB sing N N 243 LYS CA HA sing N N 244 LYS C O doub N N 245 LYS C OXT sing N N 246 LYS CB CG sing N N 247 LYS CB HB2 sing N N 248 LYS CB HB3 sing N N 249 LYS CG CD sing N N 250 LYS CG HG2 sing N N 251 LYS CG HG3 sing N N 252 LYS CD CE sing N N 253 LYS CD HD2 sing N N 254 LYS CD HD3 sing N N 255 LYS CE NZ sing N N 256 LYS CE HE2 sing N N 257 LYS CE HE3 sing N N 258 LYS NZ HZ1 sing N N 259 LYS NZ HZ2 sing N N 260 LYS NZ HZ3 sing N N 261 LYS OXT HXT sing N N 262 MET N CA sing N N 263 MET N H sing N N 264 MET N H2 sing N N 265 MET CA C sing N N 266 MET CA CB sing N N 267 MET CA HA sing N N 268 MET C O doub N N 269 MET C OXT sing N N 270 MET CB CG sing N N 271 MET CB HB2 sing N N 272 MET CB HB3 sing N N 273 MET CG SD sing N N 274 MET CG HG2 sing N N 275 MET CG HG3 sing N N 276 MET SD CE sing N N 277 MET CE HE1 sing N N 278 MET CE HE2 sing N N 279 MET CE HE3 sing N N 280 MET OXT HXT sing N N 281 PHE N CA sing N N 282 PHE N H sing N N 283 PHE N H2 sing N N 284 PHE CA C sing N N 285 PHE CA CB sing N N 286 PHE CA HA sing N N 287 PHE C O doub N N 288 PHE C OXT sing N N 289 PHE CB CG sing N N 290 PHE CB HB2 sing N N 291 PHE CB HB3 sing N N 292 PHE CG CD1 doub Y N 293 PHE CG CD2 sing Y N 294 PHE CD1 CE1 sing Y N 295 PHE CD1 HD1 sing N N 296 PHE CD2 CE2 doub Y N 297 PHE CD2 HD2 sing N N 298 PHE CE1 CZ doub Y N 299 PHE CE1 HE1 sing N N 300 PHE CE2 CZ sing Y N 301 PHE CE2 HE2 sing N N 302 PHE CZ HZ sing N N 303 PHE OXT HXT sing N N 304 PRO N CA sing N N 305 PRO N CD sing N N 306 PRO N H sing N N 307 PRO CA C sing N N 308 PRO CA CB sing N N 309 PRO CA HA sing N N 310 PRO C O doub N N 311 PRO C OXT sing N N 312 PRO CB CG sing N N 313 PRO CB HB2 sing N N 314 PRO CB HB3 sing N N 315 PRO CG CD sing N N 316 PRO CG HG2 sing N N 317 PRO CG HG3 sing N N 318 PRO CD HD2 sing N N 319 PRO CD HD3 sing N N 320 PRO OXT HXT sing N N 321 SER N CA sing N N 322 SER N H sing N N 323 SER N H2 sing N N 324 SER CA C sing N N 325 SER CA CB sing N N 326 SER CA HA sing N N 327 SER C O doub N N 328 SER C OXT sing N N 329 SER CB OG sing N N 330 SER CB HB2 sing N N 331 SER CB HB3 sing N N 332 SER OG HG sing N N 333 SER OXT HXT sing N N 334 THR N CA sing N N 335 THR N H sing N N 336 THR N H2 sing N N 337 THR CA C sing N N 338 THR CA CB sing N N 339 THR CA HA sing N N 340 THR C O doub N N 341 THR C OXT sing N N 342 THR CB OG1 sing N N 343 THR CB CG2 sing N N 344 THR CB HB sing N N 345 THR OG1 HG1 sing N N 346 THR CG2 HG21 sing N N 347 THR CG2 HG22 sing N N 348 THR CG2 HG23 sing N N 349 THR OXT HXT sing N N 350 TRP N CA sing N N 351 TRP N H sing N N 352 TRP N H2 sing N N 353 TRP CA C sing N N 354 TRP CA CB sing N N 355 TRP CA HA sing N N 356 TRP C O doub N N 357 TRP C OXT sing N N 358 TRP CB CG sing N N 359 TRP CB HB2 sing N N 360 TRP CB HB3 sing N N 361 TRP CG CD1 doub Y N 362 TRP CG CD2 sing Y N 363 TRP CD1 NE1 sing Y N 364 TRP CD1 HD1 sing N N 365 TRP CD2 CE2 doub Y N 366 TRP CD2 CE3 sing Y N 367 TRP NE1 CE2 sing Y N 368 TRP NE1 HE1 sing N N 369 TRP CE2 CZ2 sing Y N 370 TRP CE3 CZ3 doub Y N 371 TRP CE3 HE3 sing N N 372 TRP CZ2 CH2 doub Y N 373 TRP CZ2 HZ2 sing N N 374 TRP CZ3 CH2 sing Y N 375 TRP CZ3 HZ3 sing N N 376 TRP CH2 HH2 sing N N 377 TRP OXT HXT sing N N 378 TYR N CA sing N N 379 TYR N H sing N N 380 TYR N H2 sing N N 381 TYR CA C sing N N 382 TYR CA CB sing N N 383 TYR CA HA sing N N 384 TYR C O doub N N 385 TYR C OXT sing N N 386 TYR CB CG sing N N 387 TYR CB HB2 sing N N 388 TYR CB HB3 sing N N 389 TYR CG CD1 doub Y N 390 TYR CG CD2 sing Y N 391 TYR CD1 CE1 sing Y N 392 TYR CD1 HD1 sing N N 393 TYR CD2 CE2 doub Y N 394 TYR CD2 HD2 sing N N 395 TYR CE1 CZ doub Y N 396 TYR CE1 HE1 sing N N 397 TYR CE2 CZ sing Y N 398 TYR CE2 HE2 sing N N 399 TYR CZ OH sing N N 400 TYR OH HH sing N N 401 TYR OXT HXT sing N N 402 VAL N CA sing N N 403 VAL N H sing N N 404 VAL N H2 sing N N 405 VAL CA C sing N N 406 VAL CA CB sing N N 407 VAL CA HA sing N N 408 VAL C O doub N N 409 VAL C OXT sing N N 410 VAL CB CG1 sing N N 411 VAL CB CG2 sing N N 412 VAL CB HB sing N N 413 VAL CG1 HG11 sing N N 414 VAL CG1 HG12 sing N N 415 VAL CG1 HG13 sing N N 416 VAL CG2 HG21 sing N N 417 VAL CG2 HG22 sing N N 418 VAL CG2 HG23 sing N N 419 VAL OXT HXT sing N N 420 # _atom_sites.entry_id 4DKX _atom_sites.fract_transf_matrix[1][1] 0.027146 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010333 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009091 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S # loop_