data_4DOG # _entry.id 4DOG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4DOG pdb_00004dog 10.2210/pdb4dog/pdb RCSB RCSB070583 ? ? WWPDB D_1000070583 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2OWR 'The structure of wtD4 with N-terminal His-tag cleaved in orthorhombic space group' unspecified PDB 4DOF . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4DOG _pdbx_database_status.recvd_initial_deposition_date 2012-02-09 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Schormann, N.' 1 'Chattopadhyay, D.' 2 # _citation.id primary _citation.title 'Analysis of the Dimer Interface in Crystal Structures of Vaccinia Virus Uracil DNA Glycosylase' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Schormann, N.' 1 ? primary 'Sommers, C.I.' 2 ? primary 'Ricciardi, R.P.' 3 ? primary 'Chattopadhyay, D.' 4 ? # _cell.entry_id 4DOG _cell.length_a 85.790 _cell.length_b 85.790 _cell.length_c 123.460 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4DOG _symmetry.space_group_name_H-M 'P 64 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 181 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Uracil-DNA glycosylase' 25364.029 1 3.2.2.27 D17N ? ? 2 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 3 non-polymer syn 1,2-ETHANEDIOL 62.068 1 ? ? ? ? 4 water nat water 18.015 24 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name UDG # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSHMNSVTVSHAPYTITYHNDWEPVMSQLVEFYNEVASWLLRDETSPIPDKFFIQLKQPLRNKRVCVCGIDPYPKDGTGV PFESPNFTKKSIKEIASSISRLTGVIDYKGYNLNIIDGVIPWNYYLSCKLGETKSHAIYWDKISKLLLQHITKHVSVLYC LGKTDFSNIRAKLESPVTTIVGYHPAARDRQFEKDRSFEIINVLLELDNKAPINWAQGFIY ; _entity_poly.pdbx_seq_one_letter_code_can ;GSHMNSVTVSHAPYTITYHNDWEPVMSQLVEFYNEVASWLLRDETSPIPDKFFIQLKQPLRNKRVCVCGIDPYPKDGTGV PFESPNFTKKSIKEIASSISRLTGVIDYKGYNLNIIDGVIPWNYYLSCKLGETKSHAIYWDKISKLLLQHITKHVSVLYC LGKTDFSNIRAKLESPVTTIVGYHPAARDRQFEKDRSFEIINVLLELDNKAPINWAQGFIY ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 ASN n 1 6 SER n 1 7 VAL n 1 8 THR n 1 9 VAL n 1 10 SER n 1 11 HIS n 1 12 ALA n 1 13 PRO n 1 14 TYR n 1 15 THR n 1 16 ILE n 1 17 THR n 1 18 TYR n 1 19 HIS n 1 20 ASN n 1 21 ASP n 1 22 TRP n 1 23 GLU n 1 24 PRO n 1 25 VAL n 1 26 MET n 1 27 SER n 1 28 GLN n 1 29 LEU n 1 30 VAL n 1 31 GLU n 1 32 PHE n 1 33 TYR n 1 34 ASN n 1 35 GLU n 1 36 VAL n 1 37 ALA n 1 38 SER n 1 39 TRP n 1 40 LEU n 1 41 LEU n 1 42 ARG n 1 43 ASP n 1 44 GLU n 1 45 THR n 1 46 SER n 1 47 PRO n 1 48 ILE n 1 49 PRO n 1 50 ASP n 1 51 LYS n 1 52 PHE n 1 53 PHE n 1 54 ILE n 1 55 GLN n 1 56 LEU n 1 57 LYS n 1 58 GLN n 1 59 PRO n 1 60 LEU n 1 61 ARG n 1 62 ASN n 1 63 LYS n 1 64 ARG n 1 65 VAL n 1 66 CYS n 1 67 VAL n 1 68 CYS n 1 69 GLY n 1 70 ILE n 1 71 ASP n 1 72 PRO n 1 73 TYR n 1 74 PRO n 1 75 LYS n 1 76 ASP n 1 77 GLY n 1 78 THR n 1 79 GLY n 1 80 VAL n 1 81 PRO n 1 82 PHE n 1 83 GLU n 1 84 SER n 1 85 PRO n 1 86 ASN n 1 87 PHE n 1 88 THR n 1 89 LYS n 1 90 LYS n 1 91 SER n 1 92 ILE n 1 93 LYS n 1 94 GLU n 1 95 ILE n 1 96 ALA n 1 97 SER n 1 98 SER n 1 99 ILE n 1 100 SER n 1 101 ARG n 1 102 LEU n 1 103 THR n 1 104 GLY n 1 105 VAL n 1 106 ILE n 1 107 ASP n 1 108 TYR n 1 109 LYS n 1 110 GLY n 1 111 TYR n 1 112 ASN n 1 113 LEU n 1 114 ASN n 1 115 ILE n 1 116 ILE n 1 117 ASP n 1 118 GLY n 1 119 VAL n 1 120 ILE n 1 121 PRO n 1 122 TRP n 1 123 ASN n 1 124 TYR n 1 125 TYR n 1 126 LEU n 1 127 SER n 1 128 CYS n 1 129 LYS n 1 130 LEU n 1 131 GLY n 1 132 GLU n 1 133 THR n 1 134 LYS n 1 135 SER n 1 136 HIS n 1 137 ALA n 1 138 ILE n 1 139 TYR n 1 140 TRP n 1 141 ASP n 1 142 LYS n 1 143 ILE n 1 144 SER n 1 145 LYS n 1 146 LEU n 1 147 LEU n 1 148 LEU n 1 149 GLN n 1 150 HIS n 1 151 ILE n 1 152 THR n 1 153 LYS n 1 154 HIS n 1 155 VAL n 1 156 SER n 1 157 VAL n 1 158 LEU n 1 159 TYR n 1 160 CYS n 1 161 LEU n 1 162 GLY n 1 163 LYS n 1 164 THR n 1 165 ASP n 1 166 PHE n 1 167 SER n 1 168 ASN n 1 169 ILE n 1 170 ARG n 1 171 ALA n 1 172 LYS n 1 173 LEU n 1 174 GLU n 1 175 SER n 1 176 PRO n 1 177 VAL n 1 178 THR n 1 179 THR n 1 180 ILE n 1 181 VAL n 1 182 GLY n 1 183 TYR n 1 184 HIS n 1 185 PRO n 1 186 ALA n 1 187 ALA n 1 188 ARG n 1 189 ASP n 1 190 ARG n 1 191 GLN n 1 192 PHE n 1 193 GLU n 1 194 LYS n 1 195 ASP n 1 196 ARG n 1 197 SER n 1 198 PHE n 1 199 GLU n 1 200 ILE n 1 201 ILE n 1 202 ASN n 1 203 VAL n 1 204 LEU n 1 205 LEU n 1 206 GLU n 1 207 LEU n 1 208 ASP n 1 209 ASN n 1 210 LYS n 1 211 ALA n 1 212 PRO n 1 213 ILE n 1 214 ASN n 1 215 TRP n 1 216 ALA n 1 217 GLN n 1 218 GLY n 1 219 PHE n 1 220 ILE n 1 221 TYR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name VACV _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'D4R, VACWR109' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Vaccinia virus Western Reserve' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 696871 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)pLysS Rosetta' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET15b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code UNG_VACCA _struct_ref.pdbx_db_accession Q91UM2 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MNSVTVSHAPYTITYHDDWEPVMSQLVEFYNEVASWLLRDETSPIPDKFFIQLKQPLRNKRVCVCGIDPYPKDGTGVPFE SPNFTKKSIKEIASSISRLTGVIDYKGYNLNIIDGVIPWNYYLSCKLGETKSHAIYWDKISKLLLQHITKHVSVLYCLGK TDFSNIRAKLESPVTTIVGYHPAARDRQFEKDRSFEIINVLLELDNKAPINWAQGFIY ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4DOG _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 221 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q91UM2 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 218 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 218 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4DOG GLY A 1 ? UNP Q91UM2 ? ? 'expression tag' -2 1 1 4DOG SER A 2 ? UNP Q91UM2 ? ? 'expression tag' -1 2 1 4DOG HIS A 3 ? UNP Q91UM2 ? ? 'expression tag' 0 3 1 4DOG ASN A 20 ? UNP Q91UM2 ASP 17 'engineered mutation' 17 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4DOG _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.59 _exptl_crystal.density_percent_sol 52.43 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details '1.5M Ammonium sulfate, 10% Glycerol, 0.1M Hepes, 10mM Nickel sulfate, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 295K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date 2010-09-01 _diffrn_detector.details Mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator Graphite _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU200' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 4DOG _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 19.93 _reflns.d_resolution_high 2.30 _reflns.number_obs 11573 _reflns.number_all 11573 _reflns.percent_possible_obs 92.8 _reflns.pdbx_Rmerge_I_obs 0.067 _reflns.pdbx_Rsym_value 0.067 _reflns.pdbx_netI_over_sigmaI 12.8 _reflns.B_iso_Wilson_estimate 42.0 _reflns.pdbx_redundancy 3.7 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.30 _reflns_shell.d_res_low 2.38 _reflns_shell.percent_possible_all 94.0 _reflns_shell.Rmerge_I_obs 0.369 _reflns_shell.pdbx_Rsym_value 0.369 _reflns_shell.meanI_over_sigI_obs 3.7 _reflns_shell.pdbx_redundancy 3.7 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2322 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4DOG _refine.ls_number_reflns_obs 11016 _refine.ls_number_reflns_all 11016 _refine.pdbx_ls_sigma_I 0.0 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.55 _refine.ls_d_res_high 2.30 _refine.ls_percent_reflns_obs 92.42 _refine.ls_R_factor_obs 0.23623 _refine.ls_R_factor_all 0.23623 _refine.ls_R_factor_R_work 0.23431 _refine.ls_R_factor_R_free 0.27573 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.8 _refine.ls_number_reflns_R_free 555 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.938 _refine.correlation_coeff_Fo_to_Fc_free 0.905 _refine.B_iso_mean 51.731 _refine.aniso_B[1][1] -1.35 _refine.aniso_B[2][2] -1.35 _refine.aniso_B[3][3] 2.02 _refine.aniso_B[1][2] -0.67 _refine.aniso_B[1][3] -0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT' _refine.pdbx_starting_model 'PDB entry 2OWQ' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model Isotropic _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.378 _refine.pdbx_overall_ESU_R_Free 0.266 _refine.overall_SU_ML 0.235 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 20.937 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1741 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 9 _refine_hist.number_atoms_solvent 24 _refine_hist.number_atoms_total 1774 _refine_hist.d_res_high 2.30 _refine_hist.d_res_low 19.55 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.007 0.020 ? 1797 ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.139 1.952 ? 2442 ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 5.888 5.000 ? 213 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 34.496 24.125 ? 80 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 15.442 15.000 ? 302 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 7.250 15.000 ? 7 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.082 0.200 ? 268 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.004 0.021 ? 1350 ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.300 _refine_ls_shell.d_res_low 2.359 _refine_ls_shell.number_reflns_R_work 709 _refine_ls_shell.R_factor_R_work 0.318 _refine_ls_shell.percent_reflns_obs 93.21 _refine_ls_shell.R_factor_R_free 0.373 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 32 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 741 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4DOG _struct.title 'Structures of Vaccinia Virus Uracil-DNA Glycosylase in New Crystal Forms' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4DOG _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'DNA BINDING COMPONENT, VIRAL PROCESSIVITY FACTOR, Hydrolase, Glycosidase, DNA repair' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 TRP A 22 ? ARG A 42 ? TRP A 19 ARG A 39 1 ? 21 HELX_P HELX_P2 2 ILE A 48 ? PHE A 52 ? ILE A 45 PHE A 49 5 ? 5 HELX_P HELX_P3 3 PHE A 53 ? GLN A 58 ? PHE A 50 GLN A 55 5 ? 6 HELX_P HELX_P4 4 LYS A 89 ? GLY A 104 ? LYS A 86 GLY A 101 1 ? 16 HELX_P HELX_P5 5 LEU A 113 ? ILE A 116 ? LEU A 110 ILE A 113 5 ? 4 HELX_P HELX_P6 6 HIS A 136 ? THR A 152 ? HIS A 133 THR A 149 1 ? 17 HELX_P HELX_P7 7 ARG A 190 ? ASP A 208 ? ARG A 187 ASP A 205 1 ? 19 HELX_P HELX_P8 8 ASN A 214 ? GLN A 217 ? ASN A 211 GLN A 214 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ALA 12 A . ? ALA 9 A PRO 13 A ? PRO 10 A 1 5.20 2 SER 46 A . ? SER 43 A PRO 47 A ? PRO 44 A 1 -2.71 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 2 ? C ? 4 ? D ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? parallel C 2 3 ? parallel C 3 4 ? parallel D 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 MET A 4 ? THR A 8 ? MET A 1 THR A 5 A 2 THR A 15 ? HIS A 19 ? THR A 12 HIS A 16 B 1 THR A 45 ? SER A 46 ? THR A 42 SER A 43 B 2 CYS A 128 ? LYS A 129 ? CYS A 125 LYS A 126 C 1 VAL A 119 ? ASN A 123 ? VAL A 116 ASN A 120 C 2 VAL A 65 ? GLY A 69 ? VAL A 62 GLY A 66 C 3 VAL A 157 ? LEU A 161 ? VAL A 154 LEU A 158 C 4 THR A 178 ? GLY A 182 ? THR A 175 GLY A 179 D 1 GLY A 110 ? TYR A 111 ? GLY A 107 TYR A 108 D 2 PHE A 219 ? ILE A 220 ? PHE A 216 ILE A 217 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ASN A 5 ? N ASN A 2 O TYR A 18 ? O TYR A 15 B 1 2 N SER A 46 ? N SER A 43 O CYS A 128 ? O CYS A 125 C 1 2 O TRP A 122 ? O TRP A 119 N VAL A 67 ? N VAL A 64 C 2 3 N CYS A 66 ? N CYS A 63 O TYR A 159 ? O TYR A 156 C 3 4 N LEU A 158 ? N LEU A 155 O ILE A 180 ? O ILE A 177 D 1 2 N GLY A 110 ? N GLY A 107 O ILE A 220 ? O ILE A 217 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SO4 301 ? 5 'BINDING SITE FOR RESIDUE SO4 A 301' AC2 Software A EDO 302 ? 6 'BINDING SITE FOR RESIDUE EDO A 302' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 GLY A 162 ? GLY A 159 . ? 1_555 ? 2 AC1 5 LYS A 163 ? LYS A 160 . ? 1_555 ? 3 AC1 5 THR A 164 ? THR A 161 . ? 1_555 ? 4 AC1 5 TYR A 183 ? TYR A 180 . ? 1_555 ? 5 AC1 5 HIS A 184 ? HIS A 181 . ? 1_555 ? 6 AC2 6 GLY A 69 ? GLY A 66 . ? 1_555 ? 7 AC2 6 ASP A 71 ? ASP A 68 . ? 1_555 ? 8 AC2 6 TYR A 73 ? TYR A 70 . ? 1_555 ? 9 AC2 6 PHE A 82 ? PHE A 79 . ? 1_555 ? 10 AC2 6 ASN A 123 ? ASN A 120 . ? 1_555 ? 11 AC2 6 HOH D . ? HOH A 418 . ? 1_555 ? # _database_PDB_matrix.entry_id 4DOG _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4DOG _atom_sites.fract_transf_matrix[1][1] 0.011656 _atom_sites.fract_transf_matrix[1][2] 0.006730 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013460 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008100 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -2 -2 GLY GLY A . n A 1 2 SER 2 -1 -1 SER SER A . n A 1 3 HIS 3 0 0 HIS HIS A . n A 1 4 MET 4 1 1 MET MET A . n A 1 5 ASN 5 2 2 ASN ASN A . n A 1 6 SER 6 3 3 SER SER A . n A 1 7 VAL 7 4 4 VAL VAL A . n A 1 8 THR 8 5 5 THR THR A . n A 1 9 VAL 9 6 6 VAL VAL A . n A 1 10 SER 10 7 7 SER SER A . n A 1 11 HIS 11 8 8 HIS HIS A . n A 1 12 ALA 12 9 9 ALA ALA A . n A 1 13 PRO 13 10 10 PRO PRO A . n A 1 14 TYR 14 11 11 TYR TYR A . n A 1 15 THR 15 12 12 THR THR A . n A 1 16 ILE 16 13 13 ILE ILE A . n A 1 17 THR 17 14 14 THR THR A . n A 1 18 TYR 18 15 15 TYR TYR A . n A 1 19 HIS 19 16 16 HIS HIS A . n A 1 20 ASN 20 17 17 ASN ASN A . n A 1 21 ASP 21 18 18 ASP ASP A . n A 1 22 TRP 22 19 19 TRP TRP A . n A 1 23 GLU 23 20 20 GLU GLU A . n A 1 24 PRO 24 21 21 PRO PRO A . n A 1 25 VAL 25 22 22 VAL VAL A . n A 1 26 MET 26 23 23 MET MET A . n A 1 27 SER 27 24 24 SER SER A . n A 1 28 GLN 28 25 25 GLN GLN A . n A 1 29 LEU 29 26 26 LEU LEU A . n A 1 30 VAL 30 27 27 VAL VAL A . n A 1 31 GLU 31 28 28 GLU GLU A . n A 1 32 PHE 32 29 29 PHE PHE A . n A 1 33 TYR 33 30 30 TYR TYR A . n A 1 34 ASN 34 31 31 ASN ASN A . n A 1 35 GLU 35 32 32 GLU GLU A . n A 1 36 VAL 36 33 33 VAL VAL A . n A 1 37 ALA 37 34 34 ALA ALA A . n A 1 38 SER 38 35 35 SER SER A . n A 1 39 TRP 39 36 36 TRP TRP A . n A 1 40 LEU 40 37 37 LEU LEU A . n A 1 41 LEU 41 38 38 LEU LEU A . n A 1 42 ARG 42 39 39 ARG ARG A . n A 1 43 ASP 43 40 40 ASP ASP A . n A 1 44 GLU 44 41 41 GLU GLU A . n A 1 45 THR 45 42 42 THR THR A . n A 1 46 SER 46 43 43 SER SER A . n A 1 47 PRO 47 44 44 PRO PRO A . n A 1 48 ILE 48 45 45 ILE ILE A . n A 1 49 PRO 49 46 46 PRO PRO A . n A 1 50 ASP 50 47 47 ASP ASP A . n A 1 51 LYS 51 48 48 LYS LYS A . n A 1 52 PHE 52 49 49 PHE PHE A . n A 1 53 PHE 53 50 50 PHE PHE A . n A 1 54 ILE 54 51 51 ILE ILE A . n A 1 55 GLN 55 52 52 GLN GLN A . n A 1 56 LEU 56 53 53 LEU LEU A . n A 1 57 LYS 57 54 54 LYS LYS A . n A 1 58 GLN 58 55 55 GLN GLN A . n A 1 59 PRO 59 56 56 PRO PRO A . n A 1 60 LEU 60 57 57 LEU LEU A . n A 1 61 ARG 61 58 58 ARG ARG A . n A 1 62 ASN 62 59 59 ASN ASN A . n A 1 63 LYS 63 60 60 LYS LYS A . n A 1 64 ARG 64 61 61 ARG ARG A . n A 1 65 VAL 65 62 62 VAL VAL A . n A 1 66 CYS 66 63 63 CYS CYS A . n A 1 67 VAL 67 64 64 VAL VAL A . n A 1 68 CYS 68 65 65 CYS CYS A . n A 1 69 GLY 69 66 66 GLY GLY A . n A 1 70 ILE 70 67 67 ILE ILE A . n A 1 71 ASP 71 68 68 ASP ASP A . n A 1 72 PRO 72 69 69 PRO PRO A . n A 1 73 TYR 73 70 70 TYR TYR A . n A 1 74 PRO 74 71 71 PRO PRO A . n A 1 75 LYS 75 72 72 LYS LYS A . n A 1 76 ASP 76 73 73 ASP ASP A . n A 1 77 GLY 77 74 74 GLY GLY A . n A 1 78 THR 78 75 75 THR THR A . n A 1 79 GLY 79 76 76 GLY GLY A . n A 1 80 VAL 80 77 77 VAL VAL A . n A 1 81 PRO 81 78 78 PRO PRO A . n A 1 82 PHE 82 79 79 PHE PHE A . n A 1 83 GLU 83 80 80 GLU GLU A . n A 1 84 SER 84 81 81 SER SER A . n A 1 85 PRO 85 82 82 PRO PRO A . n A 1 86 ASN 86 83 83 ASN ASN A . n A 1 87 PHE 87 84 84 PHE PHE A . n A 1 88 THR 88 85 85 THR THR A . n A 1 89 LYS 89 86 86 LYS LYS A . n A 1 90 LYS 90 87 87 LYS LYS A . n A 1 91 SER 91 88 88 SER SER A . n A 1 92 ILE 92 89 89 ILE ILE A . n A 1 93 LYS 93 90 90 LYS LYS A . n A 1 94 GLU 94 91 91 GLU GLU A . n A 1 95 ILE 95 92 92 ILE ILE A . n A 1 96 ALA 96 93 93 ALA ALA A . n A 1 97 SER 97 94 94 SER SER A . n A 1 98 SER 98 95 95 SER SER A . n A 1 99 ILE 99 96 96 ILE ILE A . n A 1 100 SER 100 97 97 SER SER A . n A 1 101 ARG 101 98 98 ARG ARG A . n A 1 102 LEU 102 99 99 LEU LEU A . n A 1 103 THR 103 100 100 THR THR A . n A 1 104 GLY 104 101 101 GLY GLY A . n A 1 105 VAL 105 102 102 VAL VAL A . n A 1 106 ILE 106 103 103 ILE ILE A . n A 1 107 ASP 107 104 104 ASP ASP A . n A 1 108 TYR 108 105 105 TYR TYR A . n A 1 109 LYS 109 106 106 LYS LYS A . n A 1 110 GLY 110 107 107 GLY GLY A . n A 1 111 TYR 111 108 108 TYR TYR A . n A 1 112 ASN 112 109 109 ASN ASN A . n A 1 113 LEU 113 110 110 LEU LEU A . n A 1 114 ASN 114 111 111 ASN ASN A . n A 1 115 ILE 115 112 112 ILE ILE A . n A 1 116 ILE 116 113 113 ILE ILE A . n A 1 117 ASP 117 114 114 ASP ASP A . n A 1 118 GLY 118 115 115 GLY GLY A . n A 1 119 VAL 119 116 116 VAL VAL A . n A 1 120 ILE 120 117 117 ILE ILE A . n A 1 121 PRO 121 118 118 PRO PRO A . n A 1 122 TRP 122 119 119 TRP TRP A . n A 1 123 ASN 123 120 120 ASN ASN A . n A 1 124 TYR 124 121 121 TYR TYR A . n A 1 125 TYR 125 122 122 TYR TYR A . n A 1 126 LEU 126 123 123 LEU LEU A . n A 1 127 SER 127 124 124 SER SER A . n A 1 128 CYS 128 125 125 CYS CYS A . n A 1 129 LYS 129 126 126 LYS LYS A . n A 1 130 LEU 130 127 127 LEU LEU A . n A 1 131 GLY 131 128 128 GLY GLY A . n A 1 132 GLU 132 129 129 GLU GLU A . n A 1 133 THR 133 130 130 THR THR A . n A 1 134 LYS 134 131 131 LYS LYS A . n A 1 135 SER 135 132 132 SER SER A . n A 1 136 HIS 136 133 133 HIS HIS A . n A 1 137 ALA 137 134 134 ALA ALA A . n A 1 138 ILE 138 135 135 ILE ILE A . n A 1 139 TYR 139 136 136 TYR TYR A . n A 1 140 TRP 140 137 137 TRP TRP A . n A 1 141 ASP 141 138 138 ASP ASP A . n A 1 142 LYS 142 139 139 LYS LYS A . n A 1 143 ILE 143 140 140 ILE ILE A . n A 1 144 SER 144 141 141 SER SER A . n A 1 145 LYS 145 142 142 LYS LYS A . n A 1 146 LEU 146 143 143 LEU LEU A . n A 1 147 LEU 147 144 144 LEU LEU A . n A 1 148 LEU 148 145 145 LEU LEU A . n A 1 149 GLN 149 146 146 GLN GLN A . n A 1 150 HIS 150 147 147 HIS HIS A . n A 1 151 ILE 151 148 148 ILE ILE A . n A 1 152 THR 152 149 149 THR THR A . n A 1 153 LYS 153 150 150 LYS LYS A . n A 1 154 HIS 154 151 151 HIS HIS A . n A 1 155 VAL 155 152 152 VAL VAL A . n A 1 156 SER 156 153 153 SER SER A . n A 1 157 VAL 157 154 154 VAL VAL A . n A 1 158 LEU 158 155 155 LEU LEU A . n A 1 159 TYR 159 156 156 TYR TYR A . n A 1 160 CYS 160 157 157 CYS CYS A . n A 1 161 LEU 161 158 158 LEU LEU A . n A 1 162 GLY 162 159 159 GLY GLY A . n A 1 163 LYS 163 160 160 LYS LYS A . n A 1 164 THR 164 161 161 THR THR A . n A 1 165 ASP 165 162 162 ASP ASP A . n A 1 166 PHE 166 163 163 PHE PHE A . n A 1 167 SER 167 164 164 SER SER A . n A 1 168 ASN 168 165 ? ? ? A . n A 1 169 ILE 169 166 ? ? ? A . n A 1 170 ARG 170 167 ? ? ? A . n A 1 171 ALA 171 168 ? ? ? A . n A 1 172 LYS 172 169 ? ? ? A . n A 1 173 LEU 173 170 ? ? ? A . n A 1 174 GLU 174 171 171 GLU GLU A . n A 1 175 SER 175 172 172 SER SER A . n A 1 176 PRO 176 173 173 PRO PRO A . n A 1 177 VAL 177 174 174 VAL VAL A . n A 1 178 THR 178 175 175 THR THR A . n A 1 179 THR 179 176 176 THR THR A . n A 1 180 ILE 180 177 177 ILE ILE A . n A 1 181 VAL 181 178 178 VAL VAL A . n A 1 182 GLY 182 179 179 GLY GLY A . n A 1 183 TYR 183 180 180 TYR TYR A . n A 1 184 HIS 184 181 181 HIS HIS A . n A 1 185 PRO 185 182 182 PRO PRO A . n A 1 186 ALA 186 183 183 ALA ALA A . n A 1 187 ALA 187 184 184 ALA ALA A . n A 1 188 ARG 188 185 185 ARG ARG A . n A 1 189 ASP 189 186 186 ASP ASP A . n A 1 190 ARG 190 187 187 ARG ARG A . n A 1 191 GLN 191 188 188 GLN GLN A . n A 1 192 PHE 192 189 189 PHE PHE A . n A 1 193 GLU 193 190 190 GLU GLU A . n A 1 194 LYS 194 191 191 LYS LYS A . n A 1 195 ASP 195 192 192 ASP ASP A . n A 1 196 ARG 196 193 193 ARG ARG A . n A 1 197 SER 197 194 194 SER SER A . n A 1 198 PHE 198 195 195 PHE PHE A . n A 1 199 GLU 199 196 196 GLU GLU A . n A 1 200 ILE 200 197 197 ILE ILE A . n A 1 201 ILE 201 198 198 ILE ILE A . n A 1 202 ASN 202 199 199 ASN ASN A . n A 1 203 VAL 203 200 200 VAL VAL A . n A 1 204 LEU 204 201 201 LEU LEU A . n A 1 205 LEU 205 202 202 LEU LEU A . n A 1 206 GLU 206 203 203 GLU GLU A . n A 1 207 LEU 207 204 204 LEU LEU A . n A 1 208 ASP 208 205 205 ASP ASP A . n A 1 209 ASN 209 206 206 ASN ASN A . n A 1 210 LYS 210 207 207 LYS LYS A . n A 1 211 ALA 211 208 208 ALA ALA A . n A 1 212 PRO 212 209 209 PRO PRO A . n A 1 213 ILE 213 210 210 ILE ILE A . n A 1 214 ASN 214 211 211 ASN ASN A . n A 1 215 TRP 215 212 212 TRP TRP A . n A 1 216 ALA 216 213 213 ALA ALA A . n A 1 217 GLN 217 214 214 GLN GLN A . n A 1 218 GLY 218 215 215 GLY GLY A . n A 1 219 PHE 219 216 216 PHE PHE A . n A 1 220 ILE 220 217 217 ILE ILE A . n A 1 221 TYR 221 218 218 TYR TYR A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 1 301 301 SO4 SO4 A . C 3 EDO 1 302 401 EDO EDO A . D 4 HOH 1 401 1 HOH HOH A . D 4 HOH 2 402 2 HOH HOH A . D 4 HOH 3 403 3 HOH HOH A . D 4 HOH 4 404 4 HOH HOH A . D 4 HOH 5 405 5 HOH HOH A . D 4 HOH 6 406 6 HOH HOH A . D 4 HOH 7 407 7 HOH HOH A . D 4 HOH 8 408 8 HOH HOH A . D 4 HOH 9 409 9 HOH HOH A . D 4 HOH 10 410 10 HOH HOH A . D 4 HOH 11 411 11 HOH HOH A . D 4 HOH 12 412 12 HOH HOH A . D 4 HOH 13 413 13 HOH HOH A . D 4 HOH 14 414 14 HOH HOH A . D 4 HOH 15 415 15 HOH HOH A . D 4 HOH 16 416 16 HOH HOH A . D 4 HOH 17 417 17 HOH HOH A . D 4 HOH 18 418 18 HOH HOH A . D 4 HOH 19 419 19 HOH HOH A . D 4 HOH 20 420 20 HOH HOH A . D 4 HOH 21 421 21 HOH HOH A . D 4 HOH 22 422 22 HOH HOH A . D 4 HOH 23 423 23 HOH HOH A . D 4 HOH 24 424 24 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2760 ? 1 MORE -35 ? 1 'SSA (A^2)' 19750 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 8_555 x-y,-y,-z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-02-20 2 'Structure model' 1 1 2016-06-29 3 'Structure model' 1 2 2023-09-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Source and taxonomy' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_ref_seq_dif 6 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 37.1775 -16.6995 -22.1660 0.3374 0.8160 0.3130 -0.0923 -0.0516 0.0089 5.1073 4.7537 3.9573 -2.4258 -1.3385 -2.4780 -0.0452 0.7813 0.2526 -0.5594 0.0099 0.0481 0.3811 0.1181 0.0353 'X-RAY DIFFRACTION' 2 ? refined 30.4713 -16.5871 -12.7572 0.1819 0.4136 0.1127 -0.0287 -0.0359 -0.1621 6.1043 1.9488 2.3853 -0.3161 -1.7942 0.1082 -0.1378 0.0696 -0.1059 -0.2868 0.1730 -0.0537 0.2862 0.2375 -0.0352 'X-RAY DIFFRACTION' 3 ? refined 20.8092 -15.3145 -6.2055 0.1324 0.3940 0.1401 -0.0269 -0.0595 -0.1143 6.1265 1.8607 1.9427 -0.2698 -1.3939 0.2127 -0.1654 -0.3495 -0.0297 -0.0671 0.2429 0.1531 0.2256 0.0704 -0.0774 'X-RAY DIFFRACTION' 4 ? refined 16.5746 -8.2293 1.2027 0.0535 0.5248 0.3990 -0.0072 -0.0623 -0.2839 11.5066 1.5668 5.4418 0.9720 -1.4852 -1.5533 0.2160 -1.3856 0.8513 0.0813 0.1568 0.2134 0.0560 0.3156 -0.3728 'X-RAY DIFFRACTION' 5 ? refined 8.4367 -7.6164 -12.6265 0.1172 0.5036 0.4630 -0.0790 -0.1012 0.1208 8.7154 12.7841 3.5175 3.0386 -1.3005 -1.5567 0.0730 1.0754 1.1506 -0.3158 0.2371 0.5993 -0.1569 -0.5951 -0.3101 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A -2 ? ? A 11 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 12 ? ? A 83 ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 84 ? ? A 161 ? ? ? ? 'X-RAY DIFFRACTION' 4 4 A 162 ? ? A 202 ? ? ? ? 'X-RAY DIFFRACTION' 5 5 A 203 ? ? A 218 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal StructureStudio 'data collection' . ? 1 PHASER phasing . ? 2 REFMAC refinement 5.6.0117 ? 3 d*TREK 'data reduction' . ? 4 d*TREK 'data scaling' . ? 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 0 ? ? -143.14 14.24 2 1 TYR A 11 ? ? 70.59 -34.71 3 1 PHE A 79 ? ? 68.83 -11.58 4 1 ASP A 138 ? ? -14.78 -80.37 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ASN 165 ? A ASN 168 2 1 Y 1 A ILE 166 ? A ILE 169 3 1 Y 1 A ARG 167 ? A ARG 170 4 1 Y 1 A ALA 168 ? A ALA 171 5 1 Y 1 A LYS 169 ? A LYS 172 6 1 Y 1 A LEU 170 ? A LEU 173 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 EDO C1 C N N 88 EDO O1 O N N 89 EDO C2 C N N 90 EDO O2 O N N 91 EDO H11 H N N 92 EDO H12 H N N 93 EDO HO1 H N N 94 EDO H21 H N N 95 EDO H22 H N N 96 EDO HO2 H N N 97 GLN N N N N 98 GLN CA C N S 99 GLN C C N N 100 GLN O O N N 101 GLN CB C N N 102 GLN CG C N N 103 GLN CD C N N 104 GLN OE1 O N N 105 GLN NE2 N N N 106 GLN OXT O N N 107 GLN H H N N 108 GLN H2 H N N 109 GLN HA H N N 110 GLN HB2 H N N 111 GLN HB3 H N N 112 GLN HG2 H N N 113 GLN HG3 H N N 114 GLN HE21 H N N 115 GLN HE22 H N N 116 GLN HXT H N N 117 GLU N N N N 118 GLU CA C N S 119 GLU C C N N 120 GLU O O N N 121 GLU CB C N N 122 GLU CG C N N 123 GLU CD C N N 124 GLU OE1 O N N 125 GLU OE2 O N N 126 GLU OXT O N N 127 GLU H H N N 128 GLU H2 H N N 129 GLU HA H N N 130 GLU HB2 H N N 131 GLU HB3 H N N 132 GLU HG2 H N N 133 GLU HG3 H N N 134 GLU HE2 H N N 135 GLU HXT H N N 136 GLY N N N N 137 GLY CA C N N 138 GLY C C N N 139 GLY O O N N 140 GLY OXT O N N 141 GLY H H N N 142 GLY H2 H N N 143 GLY HA2 H N N 144 GLY HA3 H N N 145 GLY HXT H N N 146 HIS N N N N 147 HIS CA C N S 148 HIS C C N N 149 HIS O O N N 150 HIS CB C N N 151 HIS CG C Y N 152 HIS ND1 N Y N 153 HIS CD2 C Y N 154 HIS CE1 C Y N 155 HIS NE2 N Y N 156 HIS OXT O N N 157 HIS H H N N 158 HIS H2 H N N 159 HIS HA H N N 160 HIS HB2 H N N 161 HIS HB3 H N N 162 HIS HD1 H N N 163 HIS HD2 H N N 164 HIS HE1 H N N 165 HIS HE2 H N N 166 HIS HXT H N N 167 HOH O O N N 168 HOH H1 H N N 169 HOH H2 H N N 170 ILE N N N N 171 ILE CA C N S 172 ILE C C N N 173 ILE O O N N 174 ILE CB C N S 175 ILE CG1 C N N 176 ILE CG2 C N N 177 ILE CD1 C N N 178 ILE OXT O N N 179 ILE H H N N 180 ILE H2 H N N 181 ILE HA H N N 182 ILE HB H N N 183 ILE HG12 H N N 184 ILE HG13 H N N 185 ILE HG21 H N N 186 ILE HG22 H N N 187 ILE HG23 H N N 188 ILE HD11 H N N 189 ILE HD12 H N N 190 ILE HD13 H N N 191 ILE HXT H N N 192 LEU N N N N 193 LEU CA C N S 194 LEU C C N N 195 LEU O O N N 196 LEU CB C N N 197 LEU CG C N N 198 LEU CD1 C N N 199 LEU CD2 C N N 200 LEU OXT O N N 201 LEU H H N N 202 LEU H2 H N N 203 LEU HA H N N 204 LEU HB2 H N N 205 LEU HB3 H N N 206 LEU HG H N N 207 LEU HD11 H N N 208 LEU HD12 H N N 209 LEU HD13 H N N 210 LEU HD21 H N N 211 LEU HD22 H N N 212 LEU HD23 H N N 213 LEU HXT H N N 214 LYS N N N N 215 LYS CA C N S 216 LYS C C N N 217 LYS O O N N 218 LYS CB C N N 219 LYS CG C N N 220 LYS CD C N N 221 LYS CE C N N 222 LYS NZ N N N 223 LYS OXT O N N 224 LYS H H N N 225 LYS H2 H N N 226 LYS HA H N N 227 LYS HB2 H N N 228 LYS HB3 H N N 229 LYS HG2 H N N 230 LYS HG3 H N N 231 LYS HD2 H N N 232 LYS HD3 H N N 233 LYS HE2 H N N 234 LYS HE3 H N N 235 LYS HZ1 H N N 236 LYS HZ2 H N N 237 LYS HZ3 H N N 238 LYS HXT H N N 239 MET N N N N 240 MET CA C N S 241 MET C C N N 242 MET O O N N 243 MET CB C N N 244 MET CG C N N 245 MET SD S N N 246 MET CE C N N 247 MET OXT O N N 248 MET H H N N 249 MET H2 H N N 250 MET HA H N N 251 MET HB2 H N N 252 MET HB3 H N N 253 MET HG2 H N N 254 MET HG3 H N N 255 MET HE1 H N N 256 MET HE2 H N N 257 MET HE3 H N N 258 MET HXT H N N 259 PHE N N N N 260 PHE CA C N S 261 PHE C C N N 262 PHE O O N N 263 PHE CB C N N 264 PHE CG C Y N 265 PHE CD1 C Y N 266 PHE CD2 C Y N 267 PHE CE1 C Y N 268 PHE CE2 C Y N 269 PHE CZ C Y N 270 PHE OXT O N N 271 PHE H H N N 272 PHE H2 H N N 273 PHE HA H N N 274 PHE HB2 H N N 275 PHE HB3 H N N 276 PHE HD1 H N N 277 PHE HD2 H N N 278 PHE HE1 H N N 279 PHE HE2 H N N 280 PHE HZ H N N 281 PHE HXT H N N 282 PRO N N N N 283 PRO CA C N S 284 PRO C C N N 285 PRO O O N N 286 PRO CB C N N 287 PRO CG C N N 288 PRO CD C N N 289 PRO OXT O N N 290 PRO H H N N 291 PRO HA H N N 292 PRO HB2 H N N 293 PRO HB3 H N N 294 PRO HG2 H N N 295 PRO HG3 H N N 296 PRO HD2 H N N 297 PRO HD3 H N N 298 PRO HXT H N N 299 SER N N N N 300 SER CA C N S 301 SER C C N N 302 SER O O N N 303 SER CB C N N 304 SER OG O N N 305 SER OXT O N N 306 SER H H N N 307 SER H2 H N N 308 SER HA H N N 309 SER HB2 H N N 310 SER HB3 H N N 311 SER HG H N N 312 SER HXT H N N 313 SO4 S S N N 314 SO4 O1 O N N 315 SO4 O2 O N N 316 SO4 O3 O N N 317 SO4 O4 O N N 318 THR N N N N 319 THR CA C N S 320 THR C C N N 321 THR O O N N 322 THR CB C N R 323 THR OG1 O N N 324 THR CG2 C N N 325 THR OXT O N N 326 THR H H N N 327 THR H2 H N N 328 THR HA H N N 329 THR HB H N N 330 THR HG1 H N N 331 THR HG21 H N N 332 THR HG22 H N N 333 THR HG23 H N N 334 THR HXT H N N 335 TRP N N N N 336 TRP CA C N S 337 TRP C C N N 338 TRP O O N N 339 TRP CB C N N 340 TRP CG C Y N 341 TRP CD1 C Y N 342 TRP CD2 C Y N 343 TRP NE1 N Y N 344 TRP CE2 C Y N 345 TRP CE3 C Y N 346 TRP CZ2 C Y N 347 TRP CZ3 C Y N 348 TRP CH2 C Y N 349 TRP OXT O N N 350 TRP H H N N 351 TRP H2 H N N 352 TRP HA H N N 353 TRP HB2 H N N 354 TRP HB3 H N N 355 TRP HD1 H N N 356 TRP HE1 H N N 357 TRP HE3 H N N 358 TRP HZ2 H N N 359 TRP HZ3 H N N 360 TRP HH2 H N N 361 TRP HXT H N N 362 TYR N N N N 363 TYR CA C N S 364 TYR C C N N 365 TYR O O N N 366 TYR CB C N N 367 TYR CG C Y N 368 TYR CD1 C Y N 369 TYR CD2 C Y N 370 TYR CE1 C Y N 371 TYR CE2 C Y N 372 TYR CZ C Y N 373 TYR OH O N N 374 TYR OXT O N N 375 TYR H H N N 376 TYR H2 H N N 377 TYR HA H N N 378 TYR HB2 H N N 379 TYR HB3 H N N 380 TYR HD1 H N N 381 TYR HD2 H N N 382 TYR HE1 H N N 383 TYR HE2 H N N 384 TYR HH H N N 385 TYR HXT H N N 386 VAL N N N N 387 VAL CA C N S 388 VAL C C N N 389 VAL O O N N 390 VAL CB C N N 391 VAL CG1 C N N 392 VAL CG2 C N N 393 VAL OXT O N N 394 VAL H H N N 395 VAL H2 H N N 396 VAL HA H N N 397 VAL HB H N N 398 VAL HG11 H N N 399 VAL HG12 H N N 400 VAL HG13 H N N 401 VAL HG21 H N N 402 VAL HG22 H N N 403 VAL HG23 H N N 404 VAL HXT H N N 405 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 EDO C1 O1 sing N N 83 EDO C1 C2 sing N N 84 EDO C1 H11 sing N N 85 EDO C1 H12 sing N N 86 EDO O1 HO1 sing N N 87 EDO C2 O2 sing N N 88 EDO C2 H21 sing N N 89 EDO C2 H22 sing N N 90 EDO O2 HO2 sing N N 91 GLN N CA sing N N 92 GLN N H sing N N 93 GLN N H2 sing N N 94 GLN CA C sing N N 95 GLN CA CB sing N N 96 GLN CA HA sing N N 97 GLN C O doub N N 98 GLN C OXT sing N N 99 GLN CB CG sing N N 100 GLN CB HB2 sing N N 101 GLN CB HB3 sing N N 102 GLN CG CD sing N N 103 GLN CG HG2 sing N N 104 GLN CG HG3 sing N N 105 GLN CD OE1 doub N N 106 GLN CD NE2 sing N N 107 GLN NE2 HE21 sing N N 108 GLN NE2 HE22 sing N N 109 GLN OXT HXT sing N N 110 GLU N CA sing N N 111 GLU N H sing N N 112 GLU N H2 sing N N 113 GLU CA C sing N N 114 GLU CA CB sing N N 115 GLU CA HA sing N N 116 GLU C O doub N N 117 GLU C OXT sing N N 118 GLU CB CG sing N N 119 GLU CB HB2 sing N N 120 GLU CB HB3 sing N N 121 GLU CG CD sing N N 122 GLU CG HG2 sing N N 123 GLU CG HG3 sing N N 124 GLU CD OE1 doub N N 125 GLU CD OE2 sing N N 126 GLU OE2 HE2 sing N N 127 GLU OXT HXT sing N N 128 GLY N CA sing N N 129 GLY N H sing N N 130 GLY N H2 sing N N 131 GLY CA C sing N N 132 GLY CA HA2 sing N N 133 GLY CA HA3 sing N N 134 GLY C O doub N N 135 GLY C OXT sing N N 136 GLY OXT HXT sing N N 137 HIS N CA sing N N 138 HIS N H sing N N 139 HIS N H2 sing N N 140 HIS CA C sing N N 141 HIS CA CB sing N N 142 HIS CA HA sing N N 143 HIS C O doub N N 144 HIS C OXT sing N N 145 HIS CB CG sing N N 146 HIS CB HB2 sing N N 147 HIS CB HB3 sing N N 148 HIS CG ND1 sing Y N 149 HIS CG CD2 doub Y N 150 HIS ND1 CE1 doub Y N 151 HIS ND1 HD1 sing N N 152 HIS CD2 NE2 sing Y N 153 HIS CD2 HD2 sing N N 154 HIS CE1 NE2 sing Y N 155 HIS CE1 HE1 sing N N 156 HIS NE2 HE2 sing N N 157 HIS OXT HXT sing N N 158 HOH O H1 sing N N 159 HOH O H2 sing N N 160 ILE N CA sing N N 161 ILE N H sing N N 162 ILE N H2 sing N N 163 ILE CA C sing N N 164 ILE CA CB sing N N 165 ILE CA HA sing N N 166 ILE C O doub N N 167 ILE C OXT sing N N 168 ILE CB CG1 sing N N 169 ILE CB CG2 sing N N 170 ILE CB HB sing N N 171 ILE CG1 CD1 sing N N 172 ILE CG1 HG12 sing N N 173 ILE CG1 HG13 sing N N 174 ILE CG2 HG21 sing N N 175 ILE CG2 HG22 sing N N 176 ILE CG2 HG23 sing N N 177 ILE CD1 HD11 sing N N 178 ILE CD1 HD12 sing N N 179 ILE CD1 HD13 sing N N 180 ILE OXT HXT sing N N 181 LEU N CA sing N N 182 LEU N H sing N N 183 LEU N H2 sing N N 184 LEU CA C sing N N 185 LEU CA CB sing N N 186 LEU CA HA sing N N 187 LEU C O doub N N 188 LEU C OXT sing N N 189 LEU CB CG sing N N 190 LEU CB HB2 sing N N 191 LEU CB HB3 sing N N 192 LEU CG CD1 sing N N 193 LEU CG CD2 sing N N 194 LEU CG HG sing N N 195 LEU CD1 HD11 sing N N 196 LEU CD1 HD12 sing N N 197 LEU CD1 HD13 sing N N 198 LEU CD2 HD21 sing N N 199 LEU CD2 HD22 sing N N 200 LEU CD2 HD23 sing N N 201 LEU OXT HXT sing N N 202 LYS N CA sing N N 203 LYS N H sing N N 204 LYS N H2 sing N N 205 LYS CA C sing N N 206 LYS CA CB sing N N 207 LYS CA HA sing N N 208 LYS C O doub N N 209 LYS C OXT sing N N 210 LYS CB CG sing N N 211 LYS CB HB2 sing N N 212 LYS CB HB3 sing N N 213 LYS CG CD sing N N 214 LYS CG HG2 sing N N 215 LYS CG HG3 sing N N 216 LYS CD CE sing N N 217 LYS CD HD2 sing N N 218 LYS CD HD3 sing N N 219 LYS CE NZ sing N N 220 LYS CE HE2 sing N N 221 LYS CE HE3 sing N N 222 LYS NZ HZ1 sing N N 223 LYS NZ HZ2 sing N N 224 LYS NZ HZ3 sing N N 225 LYS OXT HXT sing N N 226 MET N CA sing N N 227 MET N H sing N N 228 MET N H2 sing N N 229 MET CA C sing N N 230 MET CA CB sing N N 231 MET CA HA sing N N 232 MET C O doub N N 233 MET C OXT sing N N 234 MET CB CG sing N N 235 MET CB HB2 sing N N 236 MET CB HB3 sing N N 237 MET CG SD sing N N 238 MET CG HG2 sing N N 239 MET CG HG3 sing N N 240 MET SD CE sing N N 241 MET CE HE1 sing N N 242 MET CE HE2 sing N N 243 MET CE HE3 sing N N 244 MET OXT HXT sing N N 245 PHE N CA sing N N 246 PHE N H sing N N 247 PHE N H2 sing N N 248 PHE CA C sing N N 249 PHE CA CB sing N N 250 PHE CA HA sing N N 251 PHE C O doub N N 252 PHE C OXT sing N N 253 PHE CB CG sing N N 254 PHE CB HB2 sing N N 255 PHE CB HB3 sing N N 256 PHE CG CD1 doub Y N 257 PHE CG CD2 sing Y N 258 PHE CD1 CE1 sing Y N 259 PHE CD1 HD1 sing N N 260 PHE CD2 CE2 doub Y N 261 PHE CD2 HD2 sing N N 262 PHE CE1 CZ doub Y N 263 PHE CE1 HE1 sing N N 264 PHE CE2 CZ sing Y N 265 PHE CE2 HE2 sing N N 266 PHE CZ HZ sing N N 267 PHE OXT HXT sing N N 268 PRO N CA sing N N 269 PRO N CD sing N N 270 PRO N H sing N N 271 PRO CA C sing N N 272 PRO CA CB sing N N 273 PRO CA HA sing N N 274 PRO C O doub N N 275 PRO C OXT sing N N 276 PRO CB CG sing N N 277 PRO CB HB2 sing N N 278 PRO CB HB3 sing N N 279 PRO CG CD sing N N 280 PRO CG HG2 sing N N 281 PRO CG HG3 sing N N 282 PRO CD HD2 sing N N 283 PRO CD HD3 sing N N 284 PRO OXT HXT sing N N 285 SER N CA sing N N 286 SER N H sing N N 287 SER N H2 sing N N 288 SER CA C sing N N 289 SER CA CB sing N N 290 SER CA HA sing N N 291 SER C O doub N N 292 SER C OXT sing N N 293 SER CB OG sing N N 294 SER CB HB2 sing N N 295 SER CB HB3 sing N N 296 SER OG HG sing N N 297 SER OXT HXT sing N N 298 SO4 S O1 doub N N 299 SO4 S O2 doub N N 300 SO4 S O3 sing N N 301 SO4 S O4 sing N N 302 THR N CA sing N N 303 THR N H sing N N 304 THR N H2 sing N N 305 THR CA C sing N N 306 THR CA CB sing N N 307 THR CA HA sing N N 308 THR C O doub N N 309 THR C OXT sing N N 310 THR CB OG1 sing N N 311 THR CB CG2 sing N N 312 THR CB HB sing N N 313 THR OG1 HG1 sing N N 314 THR CG2 HG21 sing N N 315 THR CG2 HG22 sing N N 316 THR CG2 HG23 sing N N 317 THR OXT HXT sing N N 318 TRP N CA sing N N 319 TRP N H sing N N 320 TRP N H2 sing N N 321 TRP CA C sing N N 322 TRP CA CB sing N N 323 TRP CA HA sing N N 324 TRP C O doub N N 325 TRP C OXT sing N N 326 TRP CB CG sing N N 327 TRP CB HB2 sing N N 328 TRP CB HB3 sing N N 329 TRP CG CD1 doub Y N 330 TRP CG CD2 sing Y N 331 TRP CD1 NE1 sing Y N 332 TRP CD1 HD1 sing N N 333 TRP CD2 CE2 doub Y N 334 TRP CD2 CE3 sing Y N 335 TRP NE1 CE2 sing Y N 336 TRP NE1 HE1 sing N N 337 TRP CE2 CZ2 sing Y N 338 TRP CE3 CZ3 doub Y N 339 TRP CE3 HE3 sing N N 340 TRP CZ2 CH2 doub Y N 341 TRP CZ2 HZ2 sing N N 342 TRP CZ3 CH2 sing Y N 343 TRP CZ3 HZ3 sing N N 344 TRP CH2 HH2 sing N N 345 TRP OXT HXT sing N N 346 TYR N CA sing N N 347 TYR N H sing N N 348 TYR N H2 sing N N 349 TYR CA C sing N N 350 TYR CA CB sing N N 351 TYR CA HA sing N N 352 TYR C O doub N N 353 TYR C OXT sing N N 354 TYR CB CG sing N N 355 TYR CB HB2 sing N N 356 TYR CB HB3 sing N N 357 TYR CG CD1 doub Y N 358 TYR CG CD2 sing Y N 359 TYR CD1 CE1 sing Y N 360 TYR CD1 HD1 sing N N 361 TYR CD2 CE2 doub Y N 362 TYR CD2 HD2 sing N N 363 TYR CE1 CZ doub Y N 364 TYR CE1 HE1 sing N N 365 TYR CE2 CZ sing Y N 366 TYR CE2 HE2 sing N N 367 TYR CZ OH sing N N 368 TYR OH HH sing N N 369 TYR OXT HXT sing N N 370 VAL N CA sing N N 371 VAL N H sing N N 372 VAL N H2 sing N N 373 VAL CA C sing N N 374 VAL CA CB sing N N 375 VAL CA HA sing N N 376 VAL C O doub N N 377 VAL C OXT sing N N 378 VAL CB CG1 sing N N 379 VAL CB CG2 sing N N 380 VAL CB HB sing N N 381 VAL CG1 HG11 sing N N 382 VAL CG1 HG12 sing N N 383 VAL CG1 HG13 sing N N 384 VAL CG2 HG21 sing N N 385 VAL CG2 HG22 sing N N 386 VAL CG2 HG23 sing N N 387 VAL OXT HXT sing N N 388 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 1,2-ETHANEDIOL EDO 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2OWQ _pdbx_initial_refinement_model.details 'PDB entry 2OWQ' #