data_4DUM # _entry.id 4DUM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4DUM pdb_00004dum 10.2210/pdb4dum/pdb RCSB RCSB070802 ? ? WWPDB D_1000070802 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-04-11 2 'Structure model' 1 1 2012-05-02 3 'Structure model' 1 2 2012-06-27 4 'Structure model' 1 3 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' struct_ref_seq_dif 5 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_ref_seq_dif.details' 4 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4DUM _pdbx_database_status.recvd_initial_deposition_date 2012-02-22 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 4DT6 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Min, X.' 1 'Johnstone, S.' 2 'Walker, N.' 3 'Wang, Z.' 4 # _citation.id primary _citation.title 'Structure-Guided Design, Synthesis, and Evaluation of Guanine-Derived Inhibitors of the eIF4E mRNA-Cap Interaction.' _citation.journal_abbrev J.Med.Chem. _citation.journal_volume 55 _citation.page_first 3837 _citation.page_last 3851 _citation.year 2012 _citation.journal_id_ASTM JMCMAR _citation.country US _citation.journal_id_ISSN 0022-2623 _citation.journal_id_CSD 0151 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22458568 _citation.pdbx_database_id_DOI 10.1021/jm300037x # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Chen, X.' 1 ? primary 'Kopecky, D.J.' 2 ? primary 'Mihalic, J.' 3 ? primary 'Jeffries, S.' 4 ? primary 'Min, X.' 5 ? primary 'Heath, J.' 6 ? primary 'Deignan, J.' 7 ? primary 'Lai, S.' 8 ? primary 'Fu, Z.' 9 ? primary 'Guimaraes, C.' 10 ? primary 'Shen, S.' 11 ? primary 'Li, S.' 12 ? primary 'Johnstone, S.' 13 ? primary 'Thibault, S.' 14 ? primary 'Xu, H.' 15 ? primary 'Cardozo, M.' 16 ? primary 'Shen, W.' 17 ? primary 'Walker, N.' 18 ? primary 'Kayser, F.' 19 ? primary 'Wang, Z.' 20 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Eukaryotic translation initiation factor 4E' 28040.301 1 ? ? ? ? 2 non-polymer syn '(4-{7-[2-(4-chlorophenoxy)ethyl]-2-(methylamino)-6-oxo-6,7-dihydro-1H-purin-8-yl}phenyl)phosphonic acid' 475.822 1 ? ? ? ? 3 non-polymer syn 1,2-ETHANEDIOL 62.068 2 ? ? ? ? 4 water nat water 18.015 14 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'eIF-4E, eIF4E, eIF-4F 25 kDa subunit, mRNA cap-binding protein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MDYKDDDDKHHHHHHTENLYFQGMATVEPETTPTPNPPTTEEEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQ ANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCL IGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFVV ; _entity_poly.pdbx_seq_one_letter_code_can ;MDYKDDDDKHHHHHHTENLYFQGMATVEPETTPTPNPPTTEEEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQ ANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCL IGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFVV ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '(4-{7-[2-(4-chlorophenoxy)ethyl]-2-(methylamino)-6-oxo-6,7-dihydro-1H-purin-8-yl}phenyl)phosphonic acid' HLI 3 1,2-ETHANEDIOL EDO 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ASP n 1 3 TYR n 1 4 LYS n 1 5 ASP n 1 6 ASP n 1 7 ASP n 1 8 ASP n 1 9 LYS n 1 10 HIS n 1 11 HIS n 1 12 HIS n 1 13 HIS n 1 14 HIS n 1 15 HIS n 1 16 THR n 1 17 GLU n 1 18 ASN n 1 19 LEU n 1 20 TYR n 1 21 PHE n 1 22 GLN n 1 23 GLY n 1 24 MET n 1 25 ALA n 1 26 THR n 1 27 VAL n 1 28 GLU n 1 29 PRO n 1 30 GLU n 1 31 THR n 1 32 THR n 1 33 PRO n 1 34 THR n 1 35 PRO n 1 36 ASN n 1 37 PRO n 1 38 PRO n 1 39 THR n 1 40 THR n 1 41 GLU n 1 42 GLU n 1 43 GLU n 1 44 LYS n 1 45 THR n 1 46 GLU n 1 47 SER n 1 48 ASN n 1 49 GLN n 1 50 GLU n 1 51 VAL n 1 52 ALA n 1 53 ASN n 1 54 PRO n 1 55 GLU n 1 56 HIS n 1 57 TYR n 1 58 ILE n 1 59 LYS n 1 60 HIS n 1 61 PRO n 1 62 LEU n 1 63 GLN n 1 64 ASN n 1 65 ARG n 1 66 TRP n 1 67 ALA n 1 68 LEU n 1 69 TRP n 1 70 PHE n 1 71 PHE n 1 72 LYS n 1 73 ASN n 1 74 ASP n 1 75 LYS n 1 76 SER n 1 77 LYS n 1 78 THR n 1 79 TRP n 1 80 GLN n 1 81 ALA n 1 82 ASN n 1 83 LEU n 1 84 ARG n 1 85 LEU n 1 86 ILE n 1 87 SER n 1 88 LYS n 1 89 PHE n 1 90 ASP n 1 91 THR n 1 92 VAL n 1 93 GLU n 1 94 ASP n 1 95 PHE n 1 96 TRP n 1 97 ALA n 1 98 LEU n 1 99 TYR n 1 100 ASN n 1 101 HIS n 1 102 ILE n 1 103 GLN n 1 104 LEU n 1 105 SER n 1 106 SER n 1 107 ASN n 1 108 LEU n 1 109 MET n 1 110 PRO n 1 111 GLY n 1 112 CYS n 1 113 ASP n 1 114 TYR n 1 115 SER n 1 116 LEU n 1 117 PHE n 1 118 LYS n 1 119 ASP n 1 120 GLY n 1 121 ILE n 1 122 GLU n 1 123 PRO n 1 124 MET n 1 125 TRP n 1 126 GLU n 1 127 ASP n 1 128 GLU n 1 129 LYS n 1 130 ASN n 1 131 LYS n 1 132 ARG n 1 133 GLY n 1 134 GLY n 1 135 ARG n 1 136 TRP n 1 137 LEU n 1 138 ILE n 1 139 THR n 1 140 LEU n 1 141 ASN n 1 142 LYS n 1 143 GLN n 1 144 GLN n 1 145 ARG n 1 146 ARG n 1 147 SER n 1 148 ASP n 1 149 LEU n 1 150 ASP n 1 151 ARG n 1 152 PHE n 1 153 TRP n 1 154 LEU n 1 155 GLU n 1 156 THR n 1 157 LEU n 1 158 LEU n 1 159 CYS n 1 160 LEU n 1 161 ILE n 1 162 GLY n 1 163 GLU n 1 164 SER n 1 165 PHE n 1 166 ASP n 1 167 ASP n 1 168 TYR n 1 169 SER n 1 170 ASP n 1 171 ASP n 1 172 VAL n 1 173 CYS n 1 174 GLY n 1 175 ALA n 1 176 VAL n 1 177 VAL n 1 178 ASN n 1 179 VAL n 1 180 ARG n 1 181 ALA n 1 182 LYS n 1 183 GLY n 1 184 ASP n 1 185 LYS n 1 186 ILE n 1 187 ALA n 1 188 ILE n 1 189 TRP n 1 190 THR n 1 191 THR n 1 192 GLU n 1 193 CYS n 1 194 GLU n 1 195 ASN n 1 196 ARG n 1 197 GLU n 1 198 ALA n 1 199 VAL n 1 200 THR n 1 201 HIS n 1 202 ILE n 1 203 GLY n 1 204 ARG n 1 205 VAL n 1 206 TYR n 1 207 LYS n 1 208 GLU n 1 209 ARG n 1 210 LEU n 1 211 GLY n 1 212 LEU n 1 213 PRO n 1 214 PRO n 1 215 LYS n 1 216 ILE n 1 217 VAL n 1 218 ILE n 1 219 GLY n 1 220 TYR n 1 221 GLN n 1 222 SER n 1 223 HIS n 1 224 ALA n 1 225 ASP n 1 226 THR n 1 227 ALA n 1 228 THR n 1 229 LYS n 1 230 SER n 1 231 GLY n 1 232 SER n 1 233 THR n 1 234 THR n 1 235 LYS n 1 236 ASN n 1 237 ARG n 1 238 PHE n 1 239 VAL n 1 240 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'EIF4E, EIF4EL1, EIF4F' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET101 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HLI non-polymer . '(4-{7-[2-(4-chlorophenoxy)ethyl]-2-(methylamino)-6-oxo-6,7-dihydro-1H-purin-8-yl}phenyl)phosphonic acid' ? 'C20 H19 Cl N5 O5 P' 475.822 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -22 ? ? ? A . n A 1 2 ASP 2 -21 ? ? ? A . n A 1 3 TYR 3 -20 ? ? ? A . n A 1 4 LYS 4 -19 ? ? ? A . n A 1 5 ASP 5 -18 ? ? ? A . n A 1 6 ASP 6 -17 ? ? ? A . n A 1 7 ASP 7 -16 ? ? ? A . n A 1 8 ASP 8 -15 ? ? ? A . n A 1 9 LYS 9 -14 ? ? ? A . n A 1 10 HIS 10 -13 ? ? ? A . n A 1 11 HIS 11 -12 ? ? ? A . n A 1 12 HIS 12 -11 ? ? ? A . n A 1 13 HIS 13 -10 ? ? ? A . n A 1 14 HIS 14 -9 ? ? ? A . n A 1 15 HIS 15 -8 ? ? ? A . n A 1 16 THR 16 -7 ? ? ? A . n A 1 17 GLU 17 -6 ? ? ? A . n A 1 18 ASN 18 -5 ? ? ? A . n A 1 19 LEU 19 -4 ? ? ? A . n A 1 20 TYR 20 -3 ? ? ? A . n A 1 21 PHE 21 -2 ? ? ? A . n A 1 22 GLN 22 -1 ? ? ? A . n A 1 23 GLY 23 0 ? ? ? A . n A 1 24 MET 24 1 ? ? ? A . n A 1 25 ALA 25 2 ? ? ? A . n A 1 26 THR 26 3 ? ? ? A . n A 1 27 VAL 27 4 ? ? ? A . n A 1 28 GLU 28 5 ? ? ? A . n A 1 29 PRO 29 6 ? ? ? A . n A 1 30 GLU 30 7 ? ? ? A . n A 1 31 THR 31 8 ? ? ? A . n A 1 32 THR 32 9 ? ? ? A . n A 1 33 PRO 33 10 ? ? ? A . n A 1 34 THR 34 11 ? ? ? A . n A 1 35 PRO 35 12 ? ? ? A . n A 1 36 ASN 36 13 ? ? ? A . n A 1 37 PRO 37 14 ? ? ? A . n A 1 38 PRO 38 15 ? ? ? A . n A 1 39 THR 39 16 ? ? ? A . n A 1 40 THR 40 17 ? ? ? A . n A 1 41 GLU 41 18 ? ? ? A . n A 1 42 GLU 42 19 ? ? ? A . n A 1 43 GLU 43 20 ? ? ? A . n A 1 44 LYS 44 21 ? ? ? A . n A 1 45 THR 45 22 ? ? ? A . n A 1 46 GLU 46 23 ? ? ? A . n A 1 47 SER 47 24 ? ? ? A . n A 1 48 ASN 48 25 ? ? ? A . n A 1 49 GLN 49 26 ? ? ? A . n A 1 50 GLU 50 27 27 GLU GLU A . n A 1 51 VAL 51 28 28 VAL VAL A . n A 1 52 ALA 52 29 29 ALA ALA A . n A 1 53 ASN 53 30 30 ASN ASN A . n A 1 54 PRO 54 31 31 PRO PRO A . n A 1 55 GLU 55 32 32 GLU GLU A . n A 1 56 HIS 56 33 33 HIS HIS A . n A 1 57 TYR 57 34 34 TYR TYR A . n A 1 58 ILE 58 35 35 ILE ILE A . n A 1 59 LYS 59 36 36 LYS LYS A . n A 1 60 HIS 60 37 37 HIS HIS A . n A 1 61 PRO 61 38 38 PRO PRO A . n A 1 62 LEU 62 39 39 LEU LEU A . n A 1 63 GLN 63 40 40 GLN GLN A . n A 1 64 ASN 64 41 41 ASN ASN A . n A 1 65 ARG 65 42 42 ARG ARG A . n A 1 66 TRP 66 43 43 TRP TRP A . n A 1 67 ALA 67 44 44 ALA ALA A . n A 1 68 LEU 68 45 45 LEU LEU A . n A 1 69 TRP 69 46 46 TRP TRP A . n A 1 70 PHE 70 47 47 PHE PHE A . n A 1 71 PHE 71 48 48 PHE PHE A . n A 1 72 LYS 72 49 49 LYS LYS A . n A 1 73 ASN 73 50 50 ASN ASN A . n A 1 74 ASP 74 51 51 ASP ASP A . n A 1 75 LYS 75 52 52 LYS LYS A . n A 1 76 SER 76 53 53 SER SER A . n A 1 77 LYS 77 54 54 LYS LYS A . n A 1 78 THR 78 55 55 THR THR A . n A 1 79 TRP 79 56 56 TRP TRP A . n A 1 80 GLN 80 57 57 GLN GLN A . n A 1 81 ALA 81 58 58 ALA ALA A . n A 1 82 ASN 82 59 59 ASN ASN A . n A 1 83 LEU 83 60 60 LEU LEU A . n A 1 84 ARG 84 61 61 ARG ARG A . n A 1 85 LEU 85 62 62 LEU LEU A . n A 1 86 ILE 86 63 63 ILE ILE A . n A 1 87 SER 87 64 64 SER SER A . n A 1 88 LYS 88 65 65 LYS LYS A . n A 1 89 PHE 89 66 66 PHE PHE A . n A 1 90 ASP 90 67 67 ASP ASP A . n A 1 91 THR 91 68 68 THR THR A . n A 1 92 VAL 92 69 69 VAL VAL A . n A 1 93 GLU 93 70 70 GLU GLU A . n A 1 94 ASP 94 71 71 ASP ASP A . n A 1 95 PHE 95 72 72 PHE PHE A . n A 1 96 TRP 96 73 73 TRP TRP A . n A 1 97 ALA 97 74 74 ALA ALA A . n A 1 98 LEU 98 75 75 LEU LEU A . n A 1 99 TYR 99 76 76 TYR TYR A . n A 1 100 ASN 100 77 77 ASN ASN A . n A 1 101 HIS 101 78 78 HIS HIS A . n A 1 102 ILE 102 79 79 ILE ILE A . n A 1 103 GLN 103 80 80 GLN GLN A . n A 1 104 LEU 104 81 81 LEU LEU A . n A 1 105 SER 105 82 82 SER SER A . n A 1 106 SER 106 83 83 SER SER A . n A 1 107 ASN 107 84 84 ASN ASN A . n A 1 108 LEU 108 85 85 LEU LEU A . n A 1 109 MET 109 86 86 MET MET A . n A 1 110 PRO 110 87 87 PRO PRO A . n A 1 111 GLY 111 88 88 GLY GLY A . n A 1 112 CYS 112 89 89 CYS CYS A . n A 1 113 ASP 113 90 90 ASP ASP A . n A 1 114 TYR 114 91 91 TYR TYR A . n A 1 115 SER 115 92 92 SER SER A . n A 1 116 LEU 116 93 93 LEU LEU A . n A 1 117 PHE 117 94 94 PHE PHE A . n A 1 118 LYS 118 95 95 LYS LYS A . n A 1 119 ASP 119 96 96 ASP ASP A . n A 1 120 GLY 120 97 97 GLY GLY A . n A 1 121 ILE 121 98 98 ILE ILE A . n A 1 122 GLU 122 99 99 GLU GLU A . n A 1 123 PRO 123 100 100 PRO PRO A . n A 1 124 MET 124 101 101 MET MET A . n A 1 125 TRP 125 102 102 TRP TRP A . n A 1 126 GLU 126 103 103 GLU GLU A . n A 1 127 ASP 127 104 104 ASP ASP A . n A 1 128 GLU 128 105 105 GLU GLU A . n A 1 129 LYS 129 106 106 LYS LYS A . n A 1 130 ASN 130 107 107 ASN ASN A . n A 1 131 LYS 131 108 108 LYS LYS A . n A 1 132 ARG 132 109 109 ARG ARG A . n A 1 133 GLY 133 110 110 GLY GLY A . n A 1 134 GLY 134 111 111 GLY GLY A . n A 1 135 ARG 135 112 112 ARG ARG A . n A 1 136 TRP 136 113 113 TRP TRP A . n A 1 137 LEU 137 114 114 LEU LEU A . n A 1 138 ILE 138 115 115 ILE ILE A . n A 1 139 THR 139 116 116 THR THR A . n A 1 140 LEU 140 117 117 LEU LEU A . n A 1 141 ASN 141 118 118 ASN ASN A . n A 1 142 LYS 142 119 119 LYS LYS A . n A 1 143 GLN 143 120 120 GLN GLN A . n A 1 144 GLN 144 121 121 GLN GLN A . n A 1 145 ARG 145 122 122 ARG ARG A . n A 1 146 ARG 146 123 123 ARG ARG A . n A 1 147 SER 147 124 124 SER SER A . n A 1 148 ASP 148 125 125 ASP ASP A . n A 1 149 LEU 149 126 126 LEU LEU A . n A 1 150 ASP 150 127 127 ASP ASP A . n A 1 151 ARG 151 128 128 ARG ARG A . n A 1 152 PHE 152 129 129 PHE PHE A . n A 1 153 TRP 153 130 130 TRP TRP A . n A 1 154 LEU 154 131 131 LEU LEU A . n A 1 155 GLU 155 132 132 GLU GLU A . n A 1 156 THR 156 133 133 THR THR A . n A 1 157 LEU 157 134 134 LEU LEU A . n A 1 158 LEU 158 135 135 LEU LEU A . n A 1 159 CYS 159 136 136 CYS CYS A . n A 1 160 LEU 160 137 137 LEU LEU A . n A 1 161 ILE 161 138 138 ILE ILE A . n A 1 162 GLY 162 139 139 GLY GLY A . n A 1 163 GLU 163 140 140 GLU GLU A . n A 1 164 SER 164 141 141 SER SER A . n A 1 165 PHE 165 142 142 PHE PHE A . n A 1 166 ASP 166 143 143 ASP ASP A . n A 1 167 ASP 167 144 144 ASP ASP A . n A 1 168 TYR 168 145 145 TYR TYR A . n A 1 169 SER 169 146 146 SER SER A . n A 1 170 ASP 170 147 147 ASP ASP A . n A 1 171 ASP 171 148 148 ASP ASP A . n A 1 172 VAL 172 149 149 VAL VAL A . n A 1 173 CYS 173 150 150 CYS CYS A . n A 1 174 GLY 174 151 151 GLY GLY A . n A 1 175 ALA 175 152 152 ALA ALA A . n A 1 176 VAL 176 153 153 VAL VAL A . n A 1 177 VAL 177 154 154 VAL VAL A . n A 1 178 ASN 178 155 155 ASN ASN A . n A 1 179 VAL 179 156 156 VAL VAL A . n A 1 180 ARG 180 157 157 ARG ARG A . n A 1 181 ALA 181 158 158 ALA ALA A . n A 1 182 LYS 182 159 159 LYS LYS A . n A 1 183 GLY 183 160 160 GLY GLY A . n A 1 184 ASP 184 161 161 ASP ASP A . n A 1 185 LYS 185 162 162 LYS LYS A . n A 1 186 ILE 186 163 163 ILE ILE A . n A 1 187 ALA 187 164 164 ALA ALA A . n A 1 188 ILE 188 165 165 ILE ILE A . n A 1 189 TRP 189 166 166 TRP TRP A . n A 1 190 THR 190 167 167 THR THR A . n A 1 191 THR 191 168 168 THR THR A . n A 1 192 GLU 192 169 169 GLU GLU A . n A 1 193 CYS 193 170 170 CYS CYS A . n A 1 194 GLU 194 171 171 GLU GLU A . n A 1 195 ASN 195 172 172 ASN ASN A . n A 1 196 ARG 196 173 173 ARG ARG A . n A 1 197 GLU 197 174 174 GLU GLU A . n A 1 198 ALA 198 175 175 ALA ALA A . n A 1 199 VAL 199 176 176 VAL VAL A . n A 1 200 THR 200 177 177 THR THR A . n A 1 201 HIS 201 178 178 HIS HIS A . n A 1 202 ILE 202 179 179 ILE ILE A . n A 1 203 GLY 203 180 180 GLY GLY A . n A 1 204 ARG 204 181 181 ARG ARG A . n A 1 205 VAL 205 182 182 VAL VAL A . n A 1 206 TYR 206 183 183 TYR TYR A . n A 1 207 LYS 207 184 184 LYS LYS A . n A 1 208 GLU 208 185 185 GLU GLU A . n A 1 209 ARG 209 186 186 ARG ARG A . n A 1 210 LEU 210 187 187 LEU LEU A . n A 1 211 GLY 211 188 188 GLY GLY A . n A 1 212 LEU 212 189 189 LEU LEU A . n A 1 213 PRO 213 190 190 PRO PRO A . n A 1 214 PRO 214 191 191 PRO PRO A . n A 1 215 LYS 215 192 192 LYS LYS A . n A 1 216 ILE 216 193 193 ILE ILE A . n A 1 217 VAL 217 194 194 VAL VAL A . n A 1 218 ILE 218 195 195 ILE ILE A . n A 1 219 GLY 219 196 196 GLY GLY A . n A 1 220 TYR 220 197 197 TYR TYR A . n A 1 221 GLN 221 198 198 GLN GLN A . n A 1 222 SER 222 199 199 SER SER A . n A 1 223 HIS 223 200 200 HIS HIS A . n A 1 224 ALA 224 201 201 ALA ALA A . n A 1 225 ASP 225 202 202 ASP ASP A . n A 1 226 THR 226 203 203 THR THR A . n A 1 227 ALA 227 204 204 ALA ALA A . n A 1 228 THR 228 205 205 THR THR A . n A 1 229 LYS 229 206 206 LYS LYS A . n A 1 230 SER 230 207 207 SER SER A . n A 1 231 GLY 231 208 ? ? ? A . n A 1 232 SER 232 209 ? ? ? A . n A 1 233 THR 233 210 ? ? ? A . n A 1 234 THR 234 211 ? ? ? A . n A 1 235 LYS 235 212 212 LYS LYS A . n A 1 236 ASN 236 213 213 ASN ASN A . n A 1 237 ARG 237 214 214 ARG ARG A . n A 1 238 PHE 238 215 215 PHE PHE A . n A 1 239 VAL 239 216 216 VAL VAL A . n A 1 240 VAL 240 217 217 VAL VAL A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HLI 1 1001 1001 HLI HLI A . C 3 EDO 1 1002 1101 EDO EDO A . D 3 EDO 1 1003 1102 EDO EDO A . E 4 HOH 1 1101 1 HOH HOH A . E 4 HOH 2 1102 2 HOH HOH A . E 4 HOH 3 1103 3 HOH HOH A . E 4 HOH 4 1104 4 HOH HOH A . E 4 HOH 5 1105 5 HOH HOH A . E 4 HOH 6 1106 6 HOH HOH A . E 4 HOH 7 1107 7 HOH HOH A . E 4 HOH 8 1108 8 HOH HOH A . E 4 HOH 9 1109 10 HOH HOH A . E 4 HOH 10 1110 11 HOH HOH A . E 4 HOH 11 1111 12 HOH HOH A . E 4 HOH 12 1112 13 HOH HOH A . E 4 HOH 13 1113 14 HOH HOH A . E 4 HOH 14 1114 15 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal StructureStudio 'data collection' . ? 1 MOLREP phasing . ? 2 REFMAC refinement 5.5.0109 ? 3 MOSFLM 'data reduction' . ? 4 SCALA 'data scaling' . ? 5 # _cell.entry_id 4DUM _cell.length_a 38.225 _cell.length_b 58.766 _cell.length_c 125.442 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4DUM _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # _exptl.entry_id 4DUM _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.51 _exptl_crystal.density_percent_sol 51.04 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_details ;The purified protein which contained 100 uM m7-GTP was then concentrated to about 7 mg/mL in 20 mM Hepes, pH7.6, 100 mM KCl, 1mM DTT, 0.1 mM EDTA for crystallization. The m7-GTP-bound eIF4e protein was crystallized with 1:1 ratio of protein solution to reservoir solution of 17-20% PEG-3350 and 0.1-0.4M Na formate, VAPOR DIFFUSION, SITTING DROP, temperature 289K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 90 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS HTC' _diffrn_detector.pdbx_collection_date 2007-05-01 _diffrn_detector.details 'Rigaku Varimax HR optics' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU FR-E SUPERBRIGHT' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.54 # _reflns.entry_id 4DUM _reflns.observed_criterion_sigma_I 2.9 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 62.75 _reflns.d_resolution_high 2.95 _reflns.number_obs 6282 _reflns.number_all 18074 _reflns.percent_possible_obs 98.9 _reflns.pdbx_Rmerge_I_obs 0.116 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 9.5 _reflns.B_iso_Wilson_estimate 58.7 _reflns.pdbx_redundancy 2.9 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.95 _reflns_shell.d_res_low 3.11 _reflns_shell.percent_possible_all 97.5 _reflns_shell.Rmerge_I_obs 0.324 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.3 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 765 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4DUM _refine.ls_number_reflns_obs 5969 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 38.236 _refine.ls_d_res_high 2.95 _refine.ls_percent_reflns_obs 98.46 _refine.ls_R_factor_obs 0.20497 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.20176 _refine.ls_R_factor_R_free 0.27110 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.7 _refine.ls_number_reflns_R_free 292 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.918 _refine.correlation_coeff_Fo_to_Fc_free 0.852 _refine.B_iso_mean 35.343 _refine.aniso_B[1][1] -0.08 _refine.aniso_B[2][2] 1.51 _refine.aniso_B[3][3] -1.43 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free 0.425 _refine.overall_SU_ML 0.317 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 16.910 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1547 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 40 _refine_hist.number_atoms_solvent 14 _refine_hist.number_atoms_total 1601 _refine_hist.d_res_high 2.95 _refine_hist.d_res_low 38.236 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.014 0.022 ? 1641 ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.506 1.953 ? 2222 ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 6.718 5.000 ? 189 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 38.487 23.929 ? 84 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 19.904 15.000 ? 284 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 19.663 15.000 ? 12 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.100 0.200 ? 228 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.006 0.021 ? 1255 ? 'X-RAY DIFFRACTION' r_mcbond_it 0.818 1.500 ? 935 ? 'X-RAY DIFFRACTION' r_mcangle_it 1.581 2.000 ? 1512 ? 'X-RAY DIFFRACTION' r_scbond_it 1.835 3.000 ? 706 ? 'X-RAY DIFFRACTION' r_scangle_it 3.215 4.500 ? 708 ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.950 _refine_ls_shell.d_res_low 3.027 _refine_ls_shell.number_reflns_R_work 401 _refine_ls_shell.R_factor_R_work 0.276 _refine_ls_shell.percent_reflns_obs 97.22 _refine_ls_shell.R_factor_R_free 0.401 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 19 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 4DUM _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4DUM _struct.title 'Co-crystal structure of eIF4E with inhibitor' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4DUM _struct_keywords.pdbx_keywords TRANSLATION _struct_keywords.text 'CAP-binding protein, translation initiation factor, m7GTP, TRANSLATION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code IF4E_HUMAN _struct_ref.pdbx_db_accession P06730 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MATVEPETTPTPNPPTTEEEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQ LSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKG DKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFVV ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4DUM _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 24 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 240 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P06730 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 217 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 217 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4DUM MET A 1 ? UNP P06730 ? ? 'expression tag' -22 1 1 4DUM ASP A 2 ? UNP P06730 ? ? 'expression tag' -21 2 1 4DUM TYR A 3 ? UNP P06730 ? ? 'expression tag' -20 3 1 4DUM LYS A 4 ? UNP P06730 ? ? 'expression tag' -19 4 1 4DUM ASP A 5 ? UNP P06730 ? ? 'expression tag' -18 5 1 4DUM ASP A 6 ? UNP P06730 ? ? 'expression tag' -17 6 1 4DUM ASP A 7 ? UNP P06730 ? ? 'expression tag' -16 7 1 4DUM ASP A 8 ? UNP P06730 ? ? 'expression tag' -15 8 1 4DUM LYS A 9 ? UNP P06730 ? ? 'expression tag' -14 9 1 4DUM HIS A 10 ? UNP P06730 ? ? 'expression tag' -13 10 1 4DUM HIS A 11 ? UNP P06730 ? ? 'expression tag' -12 11 1 4DUM HIS A 12 ? UNP P06730 ? ? 'expression tag' -11 12 1 4DUM HIS A 13 ? UNP P06730 ? ? 'expression tag' -10 13 1 4DUM HIS A 14 ? UNP P06730 ? ? 'expression tag' -9 14 1 4DUM HIS A 15 ? UNP P06730 ? ? 'expression tag' -8 15 1 4DUM THR A 16 ? UNP P06730 ? ? 'expression tag' -7 16 1 4DUM GLU A 17 ? UNP P06730 ? ? 'expression tag' -6 17 1 4DUM ASN A 18 ? UNP P06730 ? ? 'expression tag' -5 18 1 4DUM LEU A 19 ? UNP P06730 ? ? 'expression tag' -4 19 1 4DUM TYR A 20 ? UNP P06730 ? ? 'expression tag' -3 20 1 4DUM PHE A 21 ? UNP P06730 ? ? 'expression tag' -2 21 1 4DUM GLN A 22 ? UNP P06730 ? ? 'expression tag' -1 22 1 4DUM GLY A 23 ? UNP P06730 ? ? 'expression tag' 0 23 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 53 ? TYR A 57 ? ASN A 30 TYR A 34 5 ? 5 HELX_P HELX_P2 2 THR A 78 ? ASN A 82 ? THR A 55 ASN A 59 1 ? 5 HELX_P HELX_P3 3 VAL A 92 ? ILE A 102 ? VAL A 69 ILE A 79 1 ? 11 HELX_P HELX_P4 4 LEU A 104 ? LEU A 108 ? LEU A 81 LEU A 85 5 ? 5 HELX_P HELX_P5 5 ASP A 127 ? ARG A 132 ? ASP A 104 ARG A 109 1 ? 6 HELX_P HELX_P6 6 GLN A 143 ? ASP A 148 ? GLN A 120 ASP A 125 1 ? 6 HELX_P HELX_P7 7 ASP A 148 ? GLY A 162 ? ASP A 125 GLY A 139 1 ? 15 HELX_P HELX_P8 8 PHE A 165 ? ASP A 170 ? PHE A 142 ASP A 147 5 ? 6 HELX_P HELX_P9 9 ASN A 195 ? GLY A 211 ? ASN A 172 GLY A 188 1 ? 17 HELX_P HELX_P10 10 HIS A 223 ? ALA A 227 ? HIS A 200 ALA A 204 1 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 8 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 83 ? THR A 91 ? LEU A 60 THR A 68 A 2 PRO A 61 ? PHE A 71 ? PRO A 38 PHE A 48 A 3 ASP A 113 ? LYS A 118 ? ASP A 90 LYS A 95 A 4 VAL A 172 ? ASN A 178 ? VAL A 149 ASN A 155 A 5 LYS A 185 ? THR A 190 ? LYS A 162 THR A 167 A 6 GLY A 134 ? THR A 139 ? GLY A 111 THR A 116 A 7 ILE A 218 ? SER A 222 ? ILE A 195 SER A 199 A 8 PHE A 238 ? VAL A 240 ? PHE A 215 VAL A 217 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ARG A 84 ? O ARG A 61 N PHE A 70 ? N PHE A 47 A 2 3 N ALA A 67 ? N ALA A 44 O PHE A 117 ? O PHE A 94 A 3 4 N LEU A 116 ? N LEU A 93 O ALA A 175 ? O ALA A 152 A 4 5 N ASN A 178 ? N ASN A 155 O LYS A 185 ? O LYS A 162 A 5 6 O ILE A 186 ? O ILE A 163 N ILE A 138 ? N ILE A 115 A 6 7 N LEU A 137 ? N LEU A 114 O GLY A 219 ? O GLY A 196 A 7 8 N TYR A 220 ? N TYR A 197 O PHE A 238 ? O PHE A 215 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A HLI 1001 ? 13 'BINDING SITE FOR RESIDUE HLI A 1001' AC2 Software A EDO 1002 ? 1 'BINDING SITE FOR RESIDUE EDO A 1002' AC3 Software A EDO 1003 ? 1 'BINDING SITE FOR RESIDUE EDO A 1003' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 13 TRP A 79 ? TRP A 56 . ? 1_555 ? 2 AC1 13 LEU A 83 ? LEU A 60 . ? 1_555 ? 3 AC1 13 ASP A 113 ? ASP A 90 . ? 1_555 ? 4 AC1 13 SER A 115 ? SER A 92 . ? 1_555 ? 5 AC1 13 PRO A 123 ? PRO A 100 . ? 1_555 ? 6 AC1 13 MET A 124 ? MET A 101 . ? 1_555 ? 7 AC1 13 TRP A 125 ? TRP A 102 . ? 1_555 ? 8 AC1 13 GLU A 126 ? GLU A 103 . ? 1_555 ? 9 AC1 13 ARG A 180 ? ARG A 157 . ? 1_555 ? 10 AC1 13 LYS A 185 ? LYS A 162 . ? 1_555 ? 11 AC1 13 TRP A 189 ? TRP A 166 . ? 1_555 ? 12 AC1 13 ARG A 196 ? ARG A 173 . ? 3_544 ? 13 AC1 13 ARG A 204 ? ARG A 181 . ? 3_544 ? 14 AC2 1 TRP A 96 ? TRP A 73 . ? 1_555 ? 15 AC3 1 ASN A 100 ? ASN A 77 . ? 1_555 ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 32 ? ? -38.66 -39.69 2 1 ILE A 63 ? ? -65.94 -70.76 3 1 PRO A 87 ? ? -37.15 140.02 4 1 ASP A 143 ? ? 45.83 -122.76 5 1 LYS A 206 ? ? -119.36 -166.29 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -22 ? A MET 1 2 1 Y 1 A ASP -21 ? A ASP 2 3 1 Y 1 A TYR -20 ? A TYR 3 4 1 Y 1 A LYS -19 ? A LYS 4 5 1 Y 1 A ASP -18 ? A ASP 5 6 1 Y 1 A ASP -17 ? A ASP 6 7 1 Y 1 A ASP -16 ? A ASP 7 8 1 Y 1 A ASP -15 ? A ASP 8 9 1 Y 1 A LYS -14 ? A LYS 9 10 1 Y 1 A HIS -13 ? A HIS 10 11 1 Y 1 A HIS -12 ? A HIS 11 12 1 Y 1 A HIS -11 ? A HIS 12 13 1 Y 1 A HIS -10 ? A HIS 13 14 1 Y 1 A HIS -9 ? A HIS 14 15 1 Y 1 A HIS -8 ? A HIS 15 16 1 Y 1 A THR -7 ? A THR 16 17 1 Y 1 A GLU -6 ? A GLU 17 18 1 Y 1 A ASN -5 ? A ASN 18 19 1 Y 1 A LEU -4 ? A LEU 19 20 1 Y 1 A TYR -3 ? A TYR 20 21 1 Y 1 A PHE -2 ? A PHE 21 22 1 Y 1 A GLN -1 ? A GLN 22 23 1 Y 1 A GLY 0 ? A GLY 23 24 1 Y 1 A MET 1 ? A MET 24 25 1 Y 1 A ALA 2 ? A ALA 25 26 1 Y 1 A THR 3 ? A THR 26 27 1 Y 1 A VAL 4 ? A VAL 27 28 1 Y 1 A GLU 5 ? A GLU 28 29 1 Y 1 A PRO 6 ? A PRO 29 30 1 Y 1 A GLU 7 ? A GLU 30 31 1 Y 1 A THR 8 ? A THR 31 32 1 Y 1 A THR 9 ? A THR 32 33 1 Y 1 A PRO 10 ? A PRO 33 34 1 Y 1 A THR 11 ? A THR 34 35 1 Y 1 A PRO 12 ? A PRO 35 36 1 Y 1 A ASN 13 ? A ASN 36 37 1 Y 1 A PRO 14 ? A PRO 37 38 1 Y 1 A PRO 15 ? A PRO 38 39 1 Y 1 A THR 16 ? A THR 39 40 1 Y 1 A THR 17 ? A THR 40 41 1 Y 1 A GLU 18 ? A GLU 41 42 1 Y 1 A GLU 19 ? A GLU 42 43 1 Y 1 A GLU 20 ? A GLU 43 44 1 Y 1 A LYS 21 ? A LYS 44 45 1 Y 1 A THR 22 ? A THR 45 46 1 Y 1 A GLU 23 ? A GLU 46 47 1 Y 1 A SER 24 ? A SER 47 48 1 Y 1 A ASN 25 ? A ASN 48 49 1 Y 1 A GLN 26 ? A GLN 49 50 1 Y 1 A GLY 208 ? A GLY 231 51 1 Y 1 A SER 209 ? A SER 232 52 1 Y 1 A THR 210 ? A THR 233 53 1 Y 1 A THR 211 ? A THR 234 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 EDO C1 C N N 88 EDO O1 O N N 89 EDO C2 C N N 90 EDO O2 O N N 91 EDO H11 H N N 92 EDO H12 H N N 93 EDO HO1 H N N 94 EDO H21 H N N 95 EDO H22 H N N 96 EDO HO2 H N N 97 GLN N N N N 98 GLN CA C N S 99 GLN C C N N 100 GLN O O N N 101 GLN CB C N N 102 GLN CG C N N 103 GLN CD C N N 104 GLN OE1 O N N 105 GLN NE2 N N N 106 GLN OXT O N N 107 GLN H H N N 108 GLN H2 H N N 109 GLN HA H N N 110 GLN HB2 H N N 111 GLN HB3 H N N 112 GLN HG2 H N N 113 GLN HG3 H N N 114 GLN HE21 H N N 115 GLN HE22 H N N 116 GLN HXT H N N 117 GLU N N N N 118 GLU CA C N S 119 GLU C C N N 120 GLU O O N N 121 GLU CB C N N 122 GLU CG C N N 123 GLU CD C N N 124 GLU OE1 O N N 125 GLU OE2 O N N 126 GLU OXT O N N 127 GLU H H N N 128 GLU H2 H N N 129 GLU HA H N N 130 GLU HB2 H N N 131 GLU HB3 H N N 132 GLU HG2 H N N 133 GLU HG3 H N N 134 GLU HE2 H N N 135 GLU HXT H N N 136 GLY N N N N 137 GLY CA C N N 138 GLY C C N N 139 GLY O O N N 140 GLY OXT O N N 141 GLY H H N N 142 GLY H2 H N N 143 GLY HA2 H N N 144 GLY HA3 H N N 145 GLY HXT H N N 146 HIS N N N N 147 HIS CA C N S 148 HIS C C N N 149 HIS O O N N 150 HIS CB C N N 151 HIS CG C Y N 152 HIS ND1 N Y N 153 HIS CD2 C Y N 154 HIS CE1 C Y N 155 HIS NE2 N Y N 156 HIS OXT O N N 157 HIS H H N N 158 HIS H2 H N N 159 HIS HA H N N 160 HIS HB2 H N N 161 HIS HB3 H N N 162 HIS HD1 H N N 163 HIS HD2 H N N 164 HIS HE1 H N N 165 HIS HE2 H N N 166 HIS HXT H N N 167 HLI C1 C N N 168 HLI N1 N Y N 169 HLI O1 O N N 170 HLI P1 P N N 171 HLI CL1 CL N N 172 HLI C2 C Y N 173 HLI N2 N Y N 174 HLI O2 O N N 175 HLI C3 C Y N 176 HLI N3 N N N 177 HLI O3 O N N 178 HLI C4 C Y N 179 HLI N4 N N N 180 HLI O4 O N N 181 HLI C5 C N N 182 HLI N5 N N N 183 HLI O5 O N N 184 HLI C6 C N N 185 HLI C7 C Y N 186 HLI C8 C N N 187 HLI C9 C Y N 188 HLI C10 C Y N 189 HLI C11 C Y N 190 HLI C12 C Y N 191 HLI C13 C Y N 192 HLI C14 C N N 193 HLI C15 C Y N 194 HLI C16 C Y N 195 HLI C17 C Y N 196 HLI C18 C Y N 197 HLI C19 C Y N 198 HLI C20 C Y N 199 HLI H1 H N N 200 HLI H1A H N N 201 HLI HO2 H N N 202 HLI HN3 H N N 203 HLI HO4 H N N 204 HLI H8 H N N 205 HLI H8A H N N 206 HLI H9 H N N 207 HLI H10 H N N 208 HLI H12 H N N 209 HLI H13 H N N 210 HLI H14 H N N 211 HLI H14A H N N 212 HLI H16 H N N 213 HLI H17 H N N 214 HLI H19 H N N 215 HLI H20 H N N 216 HLI H14B H N N 217 HLI HN5 H N N 218 HOH O O N N 219 HOH H1 H N N 220 HOH H2 H N N 221 ILE N N N N 222 ILE CA C N S 223 ILE C C N N 224 ILE O O N N 225 ILE CB C N S 226 ILE CG1 C N N 227 ILE CG2 C N N 228 ILE CD1 C N N 229 ILE OXT O N N 230 ILE H H N N 231 ILE H2 H N N 232 ILE HA H N N 233 ILE HB H N N 234 ILE HG12 H N N 235 ILE HG13 H N N 236 ILE HG21 H N N 237 ILE HG22 H N N 238 ILE HG23 H N N 239 ILE HD11 H N N 240 ILE HD12 H N N 241 ILE HD13 H N N 242 ILE HXT H N N 243 LEU N N N N 244 LEU CA C N S 245 LEU C C N N 246 LEU O O N N 247 LEU CB C N N 248 LEU CG C N N 249 LEU CD1 C N N 250 LEU CD2 C N N 251 LEU OXT O N N 252 LEU H H N N 253 LEU H2 H N N 254 LEU HA H N N 255 LEU HB2 H N N 256 LEU HB3 H N N 257 LEU HG H N N 258 LEU HD11 H N N 259 LEU HD12 H N N 260 LEU HD13 H N N 261 LEU HD21 H N N 262 LEU HD22 H N N 263 LEU HD23 H N N 264 LEU HXT H N N 265 LYS N N N N 266 LYS CA C N S 267 LYS C C N N 268 LYS O O N N 269 LYS CB C N N 270 LYS CG C N N 271 LYS CD C N N 272 LYS CE C N N 273 LYS NZ N N N 274 LYS OXT O N N 275 LYS H H N N 276 LYS H2 H N N 277 LYS HA H N N 278 LYS HB2 H N N 279 LYS HB3 H N N 280 LYS HG2 H N N 281 LYS HG3 H N N 282 LYS HD2 H N N 283 LYS HD3 H N N 284 LYS HE2 H N N 285 LYS HE3 H N N 286 LYS HZ1 H N N 287 LYS HZ2 H N N 288 LYS HZ3 H N N 289 LYS HXT H N N 290 MET N N N N 291 MET CA C N S 292 MET C C N N 293 MET O O N N 294 MET CB C N N 295 MET CG C N N 296 MET SD S N N 297 MET CE C N N 298 MET OXT O N N 299 MET H H N N 300 MET H2 H N N 301 MET HA H N N 302 MET HB2 H N N 303 MET HB3 H N N 304 MET HG2 H N N 305 MET HG3 H N N 306 MET HE1 H N N 307 MET HE2 H N N 308 MET HE3 H N N 309 MET HXT H N N 310 PHE N N N N 311 PHE CA C N S 312 PHE C C N N 313 PHE O O N N 314 PHE CB C N N 315 PHE CG C Y N 316 PHE CD1 C Y N 317 PHE CD2 C Y N 318 PHE CE1 C Y N 319 PHE CE2 C Y N 320 PHE CZ C Y N 321 PHE OXT O N N 322 PHE H H N N 323 PHE H2 H N N 324 PHE HA H N N 325 PHE HB2 H N N 326 PHE HB3 H N N 327 PHE HD1 H N N 328 PHE HD2 H N N 329 PHE HE1 H N N 330 PHE HE2 H N N 331 PHE HZ H N N 332 PHE HXT H N N 333 PRO N N N N 334 PRO CA C N S 335 PRO C C N N 336 PRO O O N N 337 PRO CB C N N 338 PRO CG C N N 339 PRO CD C N N 340 PRO OXT O N N 341 PRO H H N N 342 PRO HA H N N 343 PRO HB2 H N N 344 PRO HB3 H N N 345 PRO HG2 H N N 346 PRO HG3 H N N 347 PRO HD2 H N N 348 PRO HD3 H N N 349 PRO HXT H N N 350 SER N N N N 351 SER CA C N S 352 SER C C N N 353 SER O O N N 354 SER CB C N N 355 SER OG O N N 356 SER OXT O N N 357 SER H H N N 358 SER H2 H N N 359 SER HA H N N 360 SER HB2 H N N 361 SER HB3 H N N 362 SER HG H N N 363 SER HXT H N N 364 THR N N N N 365 THR CA C N S 366 THR C C N N 367 THR O O N N 368 THR CB C N R 369 THR OG1 O N N 370 THR CG2 C N N 371 THR OXT O N N 372 THR H H N N 373 THR H2 H N N 374 THR HA H N N 375 THR HB H N N 376 THR HG1 H N N 377 THR HG21 H N N 378 THR HG22 H N N 379 THR HG23 H N N 380 THR HXT H N N 381 TRP N N N N 382 TRP CA C N S 383 TRP C C N N 384 TRP O O N N 385 TRP CB C N N 386 TRP CG C Y N 387 TRP CD1 C Y N 388 TRP CD2 C Y N 389 TRP NE1 N Y N 390 TRP CE2 C Y N 391 TRP CE3 C Y N 392 TRP CZ2 C Y N 393 TRP CZ3 C Y N 394 TRP CH2 C Y N 395 TRP OXT O N N 396 TRP H H N N 397 TRP H2 H N N 398 TRP HA H N N 399 TRP HB2 H N N 400 TRP HB3 H N N 401 TRP HD1 H N N 402 TRP HE1 H N N 403 TRP HE3 H N N 404 TRP HZ2 H N N 405 TRP HZ3 H N N 406 TRP HH2 H N N 407 TRP HXT H N N 408 TYR N N N N 409 TYR CA C N S 410 TYR C C N N 411 TYR O O N N 412 TYR CB C N N 413 TYR CG C Y N 414 TYR CD1 C Y N 415 TYR CD2 C Y N 416 TYR CE1 C Y N 417 TYR CE2 C Y N 418 TYR CZ C Y N 419 TYR OH O N N 420 TYR OXT O N N 421 TYR H H N N 422 TYR H2 H N N 423 TYR HA H N N 424 TYR HB2 H N N 425 TYR HB3 H N N 426 TYR HD1 H N N 427 TYR HD2 H N N 428 TYR HE1 H N N 429 TYR HE2 H N N 430 TYR HH H N N 431 TYR HXT H N N 432 VAL N N N N 433 VAL CA C N S 434 VAL C C N N 435 VAL O O N N 436 VAL CB C N N 437 VAL CG1 C N N 438 VAL CG2 C N N 439 VAL OXT O N N 440 VAL H H N N 441 VAL H2 H N N 442 VAL HA H N N 443 VAL HB H N N 444 VAL HG11 H N N 445 VAL HG12 H N N 446 VAL HG13 H N N 447 VAL HG21 H N N 448 VAL HG22 H N N 449 VAL HG23 H N N 450 VAL HXT H N N 451 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 EDO C1 O1 sing N N 83 EDO C1 C2 sing N N 84 EDO C1 H11 sing N N 85 EDO C1 H12 sing N N 86 EDO O1 HO1 sing N N 87 EDO C2 O2 sing N N 88 EDO C2 H21 sing N N 89 EDO C2 H22 sing N N 90 EDO O2 HO2 sing N N 91 GLN N CA sing N N 92 GLN N H sing N N 93 GLN N H2 sing N N 94 GLN CA C sing N N 95 GLN CA CB sing N N 96 GLN CA HA sing N N 97 GLN C O doub N N 98 GLN C OXT sing N N 99 GLN CB CG sing N N 100 GLN CB HB2 sing N N 101 GLN CB HB3 sing N N 102 GLN CG CD sing N N 103 GLN CG HG2 sing N N 104 GLN CG HG3 sing N N 105 GLN CD OE1 doub N N 106 GLN CD NE2 sing N N 107 GLN NE2 HE21 sing N N 108 GLN NE2 HE22 sing N N 109 GLN OXT HXT sing N N 110 GLU N CA sing N N 111 GLU N H sing N N 112 GLU N H2 sing N N 113 GLU CA C sing N N 114 GLU CA CB sing N N 115 GLU CA HA sing N N 116 GLU C O doub N N 117 GLU C OXT sing N N 118 GLU CB CG sing N N 119 GLU CB HB2 sing N N 120 GLU CB HB3 sing N N 121 GLU CG CD sing N N 122 GLU CG HG2 sing N N 123 GLU CG HG3 sing N N 124 GLU CD OE1 doub N N 125 GLU CD OE2 sing N N 126 GLU OE2 HE2 sing N N 127 GLU OXT HXT sing N N 128 GLY N CA sing N N 129 GLY N H sing N N 130 GLY N H2 sing N N 131 GLY CA C sing N N 132 GLY CA HA2 sing N N 133 GLY CA HA3 sing N N 134 GLY C O doub N N 135 GLY C OXT sing N N 136 GLY OXT HXT sing N N 137 HIS N CA sing N N 138 HIS N H sing N N 139 HIS N H2 sing N N 140 HIS CA C sing N N 141 HIS CA CB sing N N 142 HIS CA HA sing N N 143 HIS C O doub N N 144 HIS C OXT sing N N 145 HIS CB CG sing N N 146 HIS CB HB2 sing N N 147 HIS CB HB3 sing N N 148 HIS CG ND1 sing Y N 149 HIS CG CD2 doub Y N 150 HIS ND1 CE1 doub Y N 151 HIS ND1 HD1 sing N N 152 HIS CD2 NE2 sing Y N 153 HIS CD2 HD2 sing N N 154 HIS CE1 NE2 sing Y N 155 HIS CE1 HE1 sing N N 156 HIS NE2 HE2 sing N N 157 HIS OXT HXT sing N N 158 HLI C8 C1 sing N N 159 HLI C1 O5 sing N N 160 HLI C1 H1 sing N N 161 HLI C1 H1A sing N N 162 HLI C3 N1 sing Y N 163 HLI N1 C4 doub Y N 164 HLI C6 O1 doub N N 165 HLI O3 P1 doub N N 166 HLI C11 P1 sing N N 167 HLI P1 O2 sing N N 168 HLI P1 O4 sing N N 169 HLI C18 CL1 sing N N 170 HLI C3 C2 doub Y N 171 HLI C6 C2 sing N N 172 HLI C2 N2 sing Y N 173 HLI C4 N2 sing Y N 174 HLI N2 C8 sing N N 175 HLI O2 HO2 sing N N 176 HLI N4 C3 sing N N 177 HLI C5 N3 sing N N 178 HLI N3 C6 sing N N 179 HLI N3 HN3 sing N N 180 HLI C4 C7 sing N N 181 HLI C5 N4 doub N N 182 HLI O4 HO4 sing N N 183 HLI N5 C5 sing N N 184 HLI C14 N5 sing N N 185 HLI O5 C15 sing N N 186 HLI C13 C7 doub Y N 187 HLI C7 C9 sing Y N 188 HLI C8 H8 sing N N 189 HLI C8 H8A sing N N 190 HLI C9 C10 doub Y N 191 HLI C9 H9 sing N N 192 HLI C11 C10 sing Y N 193 HLI C10 H10 sing N N 194 HLI C12 C11 doub Y N 195 HLI C13 C12 sing Y N 196 HLI C12 H12 sing N N 197 HLI C13 H13 sing N N 198 HLI C14 H14 sing N N 199 HLI C14 H14A sing N N 200 HLI C15 C16 doub Y N 201 HLI C15 C20 sing Y N 202 HLI C16 C17 sing Y N 203 HLI C16 H16 sing N N 204 HLI C17 C18 doub Y N 205 HLI C17 H17 sing N N 206 HLI C19 C18 sing Y N 207 HLI C20 C19 doub Y N 208 HLI C19 H19 sing N N 209 HLI C20 H20 sing N N 210 HLI C14 H14B sing N N 211 HLI N5 HN5 sing N N 212 HOH O H1 sing N N 213 HOH O H2 sing N N 214 ILE N CA sing N N 215 ILE N H sing N N 216 ILE N H2 sing N N 217 ILE CA C sing N N 218 ILE CA CB sing N N 219 ILE CA HA sing N N 220 ILE C O doub N N 221 ILE C OXT sing N N 222 ILE CB CG1 sing N N 223 ILE CB CG2 sing N N 224 ILE CB HB sing N N 225 ILE CG1 CD1 sing N N 226 ILE CG1 HG12 sing N N 227 ILE CG1 HG13 sing N N 228 ILE CG2 HG21 sing N N 229 ILE CG2 HG22 sing N N 230 ILE CG2 HG23 sing N N 231 ILE CD1 HD11 sing N N 232 ILE CD1 HD12 sing N N 233 ILE CD1 HD13 sing N N 234 ILE OXT HXT sing N N 235 LEU N CA sing N N 236 LEU N H sing N N 237 LEU N H2 sing N N 238 LEU CA C sing N N 239 LEU CA CB sing N N 240 LEU CA HA sing N N 241 LEU C O doub N N 242 LEU C OXT sing N N 243 LEU CB CG sing N N 244 LEU CB HB2 sing N N 245 LEU CB HB3 sing N N 246 LEU CG CD1 sing N N 247 LEU CG CD2 sing N N 248 LEU CG HG sing N N 249 LEU CD1 HD11 sing N N 250 LEU CD1 HD12 sing N N 251 LEU CD1 HD13 sing N N 252 LEU CD2 HD21 sing N N 253 LEU CD2 HD22 sing N N 254 LEU CD2 HD23 sing N N 255 LEU OXT HXT sing N N 256 LYS N CA sing N N 257 LYS N H sing N N 258 LYS N H2 sing N N 259 LYS CA C sing N N 260 LYS CA CB sing N N 261 LYS CA HA sing N N 262 LYS C O doub N N 263 LYS C OXT sing N N 264 LYS CB CG sing N N 265 LYS CB HB2 sing N N 266 LYS CB HB3 sing N N 267 LYS CG CD sing N N 268 LYS CG HG2 sing N N 269 LYS CG HG3 sing N N 270 LYS CD CE sing N N 271 LYS CD HD2 sing N N 272 LYS CD HD3 sing N N 273 LYS CE NZ sing N N 274 LYS CE HE2 sing N N 275 LYS CE HE3 sing N N 276 LYS NZ HZ1 sing N N 277 LYS NZ HZ2 sing N N 278 LYS NZ HZ3 sing N N 279 LYS OXT HXT sing N N 280 MET N CA sing N N 281 MET N H sing N N 282 MET N H2 sing N N 283 MET CA C sing N N 284 MET CA CB sing N N 285 MET CA HA sing N N 286 MET C O doub N N 287 MET C OXT sing N N 288 MET CB CG sing N N 289 MET CB HB2 sing N N 290 MET CB HB3 sing N N 291 MET CG SD sing N N 292 MET CG HG2 sing N N 293 MET CG HG3 sing N N 294 MET SD CE sing N N 295 MET CE HE1 sing N N 296 MET CE HE2 sing N N 297 MET CE HE3 sing N N 298 MET OXT HXT sing N N 299 PHE N CA sing N N 300 PHE N H sing N N 301 PHE N H2 sing N N 302 PHE CA C sing N N 303 PHE CA CB sing N N 304 PHE CA HA sing N N 305 PHE C O doub N N 306 PHE C OXT sing N N 307 PHE CB CG sing N N 308 PHE CB HB2 sing N N 309 PHE CB HB3 sing N N 310 PHE CG CD1 doub Y N 311 PHE CG CD2 sing Y N 312 PHE CD1 CE1 sing Y N 313 PHE CD1 HD1 sing N N 314 PHE CD2 CE2 doub Y N 315 PHE CD2 HD2 sing N N 316 PHE CE1 CZ doub Y N 317 PHE CE1 HE1 sing N N 318 PHE CE2 CZ sing Y N 319 PHE CE2 HE2 sing N N 320 PHE CZ HZ sing N N 321 PHE OXT HXT sing N N 322 PRO N CA sing N N 323 PRO N CD sing N N 324 PRO N H sing N N 325 PRO CA C sing N N 326 PRO CA CB sing N N 327 PRO CA HA sing N N 328 PRO C O doub N N 329 PRO C OXT sing N N 330 PRO CB CG sing N N 331 PRO CB HB2 sing N N 332 PRO CB HB3 sing N N 333 PRO CG CD sing N N 334 PRO CG HG2 sing N N 335 PRO CG HG3 sing N N 336 PRO CD HD2 sing N N 337 PRO CD HD3 sing N N 338 PRO OXT HXT sing N N 339 SER N CA sing N N 340 SER N H sing N N 341 SER N H2 sing N N 342 SER CA C sing N N 343 SER CA CB sing N N 344 SER CA HA sing N N 345 SER C O doub N N 346 SER C OXT sing N N 347 SER CB OG sing N N 348 SER CB HB2 sing N N 349 SER CB HB3 sing N N 350 SER OG HG sing N N 351 SER OXT HXT sing N N 352 THR N CA sing N N 353 THR N H sing N N 354 THR N H2 sing N N 355 THR CA C sing N N 356 THR CA CB sing N N 357 THR CA HA sing N N 358 THR C O doub N N 359 THR C OXT sing N N 360 THR CB OG1 sing N N 361 THR CB CG2 sing N N 362 THR CB HB sing N N 363 THR OG1 HG1 sing N N 364 THR CG2 HG21 sing N N 365 THR CG2 HG22 sing N N 366 THR CG2 HG23 sing N N 367 THR OXT HXT sing N N 368 TRP N CA sing N N 369 TRP N H sing N N 370 TRP N H2 sing N N 371 TRP CA C sing N N 372 TRP CA CB sing N N 373 TRP CA HA sing N N 374 TRP C O doub N N 375 TRP C OXT sing N N 376 TRP CB CG sing N N 377 TRP CB HB2 sing N N 378 TRP CB HB3 sing N N 379 TRP CG CD1 doub Y N 380 TRP CG CD2 sing Y N 381 TRP CD1 NE1 sing Y N 382 TRP CD1 HD1 sing N N 383 TRP CD2 CE2 doub Y N 384 TRP CD2 CE3 sing Y N 385 TRP NE1 CE2 sing Y N 386 TRP NE1 HE1 sing N N 387 TRP CE2 CZ2 sing Y N 388 TRP CE3 CZ3 doub Y N 389 TRP CE3 HE3 sing N N 390 TRP CZ2 CH2 doub Y N 391 TRP CZ2 HZ2 sing N N 392 TRP CZ3 CH2 sing Y N 393 TRP CZ3 HZ3 sing N N 394 TRP CH2 HH2 sing N N 395 TRP OXT HXT sing N N 396 TYR N CA sing N N 397 TYR N H sing N N 398 TYR N H2 sing N N 399 TYR CA C sing N N 400 TYR CA CB sing N N 401 TYR CA HA sing N N 402 TYR C O doub N N 403 TYR C OXT sing N N 404 TYR CB CG sing N N 405 TYR CB HB2 sing N N 406 TYR CB HB3 sing N N 407 TYR CG CD1 doub Y N 408 TYR CG CD2 sing Y N 409 TYR CD1 CE1 sing Y N 410 TYR CD1 HD1 sing N N 411 TYR CD2 CE2 doub Y N 412 TYR CD2 HD2 sing N N 413 TYR CE1 CZ doub Y N 414 TYR CE1 HE1 sing N N 415 TYR CE2 CZ sing Y N 416 TYR CE2 HE2 sing N N 417 TYR CZ OH sing N N 418 TYR OH HH sing N N 419 TYR OXT HXT sing N N 420 VAL N CA sing N N 421 VAL N H sing N N 422 VAL N H2 sing N N 423 VAL CA C sing N N 424 VAL CA CB sing N N 425 VAL CA HA sing N N 426 VAL C O doub N N 427 VAL C OXT sing N N 428 VAL CB CG1 sing N N 429 VAL CB CG2 sing N N 430 VAL CB HB sing N N 431 VAL CG1 HG11 sing N N 432 VAL CG1 HG12 sing N N 433 VAL CG1 HG13 sing N N 434 VAL CG2 HG21 sing N N 435 VAL CG2 HG22 sing N N 436 VAL CG2 HG23 sing N N 437 VAL OXT HXT sing N N 438 # _atom_sites.entry_id 4DUM _atom_sites.fract_transf_matrix[1][1] 0.026161 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017017 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007972 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL N O P S # loop_