data_4EYH # _entry.id 4EYH # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4EYH pdb_00004eyh 10.2210/pdb4eyh/pdb NDB NA1778 ? ? RCSB RCSB072227 ? ? WWPDB D_1000072227 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 4EYI _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4EYH _pdbx_database_status.recvd_initial_deposition_date 2012-05-01 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kirouac, K.' 1 'Ling, H.' 2 # _citation.id primary _citation.title 'Replication of a carcinogenic nitropyrene DNA lesion by human Y-family DNA polymerase.' _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 41 _citation.page_first 2060 _citation.page_last 2071 _citation.year 2013 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23268450 _citation.pdbx_database_id_DOI 10.1093/nar/gks1296 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kirouac, K.N.' 1 ? primary 'Basu, A.K.' 2 ? primary 'Ling, H.' 3 ? # _cell.entry_id 4EYH _cell.length_a 98.046 _cell.length_b 98.046 _cell.length_c 194.649 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4EYH _symmetry.space_group_name_H-M 'P 65 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA polymerase iota' 47027.344 1 2.7.7.7 ? 'UNP residues 26-445' ? 2 polymer syn 'DNA template' 2673.865 1 ? ? ? ? 3 polymer syn 'DNA primer' 2107.413 1 ? ? ? ? 4 non-polymer syn "2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE" 467.157 1 ? ? ? ? 5 non-polymer syn 'MAGNESIUM ION' 24.305 3 ? ? ? ? 6 water nat water 18.015 28 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Eta2, RAD30 homolog B' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MELADVGAAASSQGVHDQVLPTPNASSRVIVHVDLDCFYAQVEMISNPELKDKPLGVQQKYLVVTCNYEARKLGVKKLMN VRDAKEKCPQLVLVNGEDLTRYREMSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKRLQQLQSDELSAVTVSGHVYNN QSINLLDVLHIRLLVGSQIAAEMREAMYNQLGLTGCAGVASNKLLAKLVSGVFKPNQQTVLLPESCQHLIHSLNHIKEIP GIGYKTAKCLEALGINSVRDLQTFSPKILEKELGISVAQRIQKLSFGEDNSPVILSGPPQSFSEEDSFKKCSSEVEAKNK IEELLASLLNRVCQDGRKPHTVRLIIRRYSSEKHYGRESRQCPIPSHVIQKLGTGNYDVMTPMVDILMKLFRNMVNVKMP FHLTLLSVCFCNLKALNTAK ; ;MELADVGAAASSQGVHDQVLPTPNASSRVIVHVDLDCFYAQVEMISNPELKDKPLGVQQKYLVVTCNYEARKLGVKKLMN VRDAKEKCPQLVLVNGEDLTRYREMSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKRLQQLQSDELSAVTVSGHVYNN QSINLLDVLHIRLLVGSQIAAEMREAMYNQLGLTGCAGVASNKLLAKLVSGVFKPNQQTVLLPESCQHLIHSLNHIKEIP GIGYKTAKCLEALGINSVRDLQTFSPKILEKELGISVAQRIQKLSFGEDNSPVILSGPPQSFSEEDSFKKCSSEVEAKNK IEELLASLLNRVCQDGRKPHTVRLIIRRYSSEKHYGRESRQCPIPSHVIQKLGTGNYDVMTPMVDILMKLFRNMVNVKMP FHLTLLSVCFCNLKALNTAK ; B ? 2 polydeoxyribonucleotide no yes '(DG8)(DG)(DG)(DG)(DT)(DC)(DC)(DT)' XGGGTCCT T ? 3 polydeoxyribonucleotide no no '(DA)(DG)(DG)(DA)(DC)(DC)(DC)' AGGACCC P ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLU n 1 3 LEU n 1 4 ALA n 1 5 ASP n 1 6 VAL n 1 7 GLY n 1 8 ALA n 1 9 ALA n 1 10 ALA n 1 11 SER n 1 12 SER n 1 13 GLN n 1 14 GLY n 1 15 VAL n 1 16 HIS n 1 17 ASP n 1 18 GLN n 1 19 VAL n 1 20 LEU n 1 21 PRO n 1 22 THR n 1 23 PRO n 1 24 ASN n 1 25 ALA n 1 26 SER n 1 27 SER n 1 28 ARG n 1 29 VAL n 1 30 ILE n 1 31 VAL n 1 32 HIS n 1 33 VAL n 1 34 ASP n 1 35 LEU n 1 36 ASP n 1 37 CYS n 1 38 PHE n 1 39 TYR n 1 40 ALA n 1 41 GLN n 1 42 VAL n 1 43 GLU n 1 44 MET n 1 45 ILE n 1 46 SER n 1 47 ASN n 1 48 PRO n 1 49 GLU n 1 50 LEU n 1 51 LYS n 1 52 ASP n 1 53 LYS n 1 54 PRO n 1 55 LEU n 1 56 GLY n 1 57 VAL n 1 58 GLN n 1 59 GLN n 1 60 LYS n 1 61 TYR n 1 62 LEU n 1 63 VAL n 1 64 VAL n 1 65 THR n 1 66 CYS n 1 67 ASN n 1 68 TYR n 1 69 GLU n 1 70 ALA n 1 71 ARG n 1 72 LYS n 1 73 LEU n 1 74 GLY n 1 75 VAL n 1 76 LYS n 1 77 LYS n 1 78 LEU n 1 79 MET n 1 80 ASN n 1 81 VAL n 1 82 ARG n 1 83 ASP n 1 84 ALA n 1 85 LYS n 1 86 GLU n 1 87 LYS n 1 88 CYS n 1 89 PRO n 1 90 GLN n 1 91 LEU n 1 92 VAL n 1 93 LEU n 1 94 VAL n 1 95 ASN n 1 96 GLY n 1 97 GLU n 1 98 ASP n 1 99 LEU n 1 100 THR n 1 101 ARG n 1 102 TYR n 1 103 ARG n 1 104 GLU n 1 105 MET n 1 106 SER n 1 107 TYR n 1 108 LYS n 1 109 VAL n 1 110 THR n 1 111 GLU n 1 112 LEU n 1 113 LEU n 1 114 GLU n 1 115 GLU n 1 116 PHE n 1 117 SER n 1 118 PRO n 1 119 VAL n 1 120 VAL n 1 121 GLU n 1 122 ARG n 1 123 LEU n 1 124 GLY n 1 125 PHE n 1 126 ASP n 1 127 GLU n 1 128 ASN n 1 129 PHE n 1 130 VAL n 1 131 ASP n 1 132 LEU n 1 133 THR n 1 134 GLU n 1 135 MET n 1 136 VAL n 1 137 GLU n 1 138 LYS n 1 139 ARG n 1 140 LEU n 1 141 GLN n 1 142 GLN n 1 143 LEU n 1 144 GLN n 1 145 SER n 1 146 ASP n 1 147 GLU n 1 148 LEU n 1 149 SER n 1 150 ALA n 1 151 VAL n 1 152 THR n 1 153 VAL n 1 154 SER n 1 155 GLY n 1 156 HIS n 1 157 VAL n 1 158 TYR n 1 159 ASN n 1 160 ASN n 1 161 GLN n 1 162 SER n 1 163 ILE n 1 164 ASN n 1 165 LEU n 1 166 LEU n 1 167 ASP n 1 168 VAL n 1 169 LEU n 1 170 HIS n 1 171 ILE n 1 172 ARG n 1 173 LEU n 1 174 LEU n 1 175 VAL n 1 176 GLY n 1 177 SER n 1 178 GLN n 1 179 ILE n 1 180 ALA n 1 181 ALA n 1 182 GLU n 1 183 MET n 1 184 ARG n 1 185 GLU n 1 186 ALA n 1 187 MET n 1 188 TYR n 1 189 ASN n 1 190 GLN n 1 191 LEU n 1 192 GLY n 1 193 LEU n 1 194 THR n 1 195 GLY n 1 196 CYS n 1 197 ALA n 1 198 GLY n 1 199 VAL n 1 200 ALA n 1 201 SER n 1 202 ASN n 1 203 LYS n 1 204 LEU n 1 205 LEU n 1 206 ALA n 1 207 LYS n 1 208 LEU n 1 209 VAL n 1 210 SER n 1 211 GLY n 1 212 VAL n 1 213 PHE n 1 214 LYS n 1 215 PRO n 1 216 ASN n 1 217 GLN n 1 218 GLN n 1 219 THR n 1 220 VAL n 1 221 LEU n 1 222 LEU n 1 223 PRO n 1 224 GLU n 1 225 SER n 1 226 CYS n 1 227 GLN n 1 228 HIS n 1 229 LEU n 1 230 ILE n 1 231 HIS n 1 232 SER n 1 233 LEU n 1 234 ASN n 1 235 HIS n 1 236 ILE n 1 237 LYS n 1 238 GLU n 1 239 ILE n 1 240 PRO n 1 241 GLY n 1 242 ILE n 1 243 GLY n 1 244 TYR n 1 245 LYS n 1 246 THR n 1 247 ALA n 1 248 LYS n 1 249 CYS n 1 250 LEU n 1 251 GLU n 1 252 ALA n 1 253 LEU n 1 254 GLY n 1 255 ILE n 1 256 ASN n 1 257 SER n 1 258 VAL n 1 259 ARG n 1 260 ASP n 1 261 LEU n 1 262 GLN n 1 263 THR n 1 264 PHE n 1 265 SER n 1 266 PRO n 1 267 LYS n 1 268 ILE n 1 269 LEU n 1 270 GLU n 1 271 LYS n 1 272 GLU n 1 273 LEU n 1 274 GLY n 1 275 ILE n 1 276 SER n 1 277 VAL n 1 278 ALA n 1 279 GLN n 1 280 ARG n 1 281 ILE n 1 282 GLN n 1 283 LYS n 1 284 LEU n 1 285 SER n 1 286 PHE n 1 287 GLY n 1 288 GLU n 1 289 ASP n 1 290 ASN n 1 291 SER n 1 292 PRO n 1 293 VAL n 1 294 ILE n 1 295 LEU n 1 296 SER n 1 297 GLY n 1 298 PRO n 1 299 PRO n 1 300 GLN n 1 301 SER n 1 302 PHE n 1 303 SER n 1 304 GLU n 1 305 GLU n 1 306 ASP n 1 307 SER n 1 308 PHE n 1 309 LYS n 1 310 LYS n 1 311 CYS n 1 312 SER n 1 313 SER n 1 314 GLU n 1 315 VAL n 1 316 GLU n 1 317 ALA n 1 318 LYS n 1 319 ASN n 1 320 LYS n 1 321 ILE n 1 322 GLU n 1 323 GLU n 1 324 LEU n 1 325 LEU n 1 326 ALA n 1 327 SER n 1 328 LEU n 1 329 LEU n 1 330 ASN n 1 331 ARG n 1 332 VAL n 1 333 CYS n 1 334 GLN n 1 335 ASP n 1 336 GLY n 1 337 ARG n 1 338 LYS n 1 339 PRO n 1 340 HIS n 1 341 THR n 1 342 VAL n 1 343 ARG n 1 344 LEU n 1 345 ILE n 1 346 ILE n 1 347 ARG n 1 348 ARG n 1 349 TYR n 1 350 SER n 1 351 SER n 1 352 GLU n 1 353 LYS n 1 354 HIS n 1 355 TYR n 1 356 GLY n 1 357 ARG n 1 358 GLU n 1 359 SER n 1 360 ARG n 1 361 GLN n 1 362 CYS n 1 363 PRO n 1 364 ILE n 1 365 PRO n 1 366 SER n 1 367 HIS n 1 368 VAL n 1 369 ILE n 1 370 GLN n 1 371 LYS n 1 372 LEU n 1 373 GLY n 1 374 THR n 1 375 GLY n 1 376 ASN n 1 377 TYR n 1 378 ASP n 1 379 VAL n 1 380 MET n 1 381 THR n 1 382 PRO n 1 383 MET n 1 384 VAL n 1 385 ASP n 1 386 ILE n 1 387 LEU n 1 388 MET n 1 389 LYS n 1 390 LEU n 1 391 PHE n 1 392 ARG n 1 393 ASN n 1 394 MET n 1 395 VAL n 1 396 ASN n 1 397 VAL n 1 398 LYS n 1 399 MET n 1 400 PRO n 1 401 PHE n 1 402 HIS n 1 403 LEU n 1 404 THR n 1 405 LEU n 1 406 LEU n 1 407 SER n 1 408 VAL n 1 409 CYS n 1 410 PHE n 1 411 CYS n 1 412 ASN n 1 413 LEU n 1 414 LYS n 1 415 ALA n 1 416 LEU n 1 417 ASN n 1 418 THR n 1 419 ALA n 1 420 LYS n 2 1 DG8 n 2 2 DG n 2 3 DG n 2 4 DG n 2 5 DT n 2 6 DC n 2 7 DC n 2 8 DT n 3 1 DA n 3 2 DG n 3 3 DG n 3 4 DA n 3 5 DC n 3 6 DC n 3 7 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'POLI, RAD30B' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample ? ? ? ? ? Synthesized 3 1 sample ? ? ? ? ? Synthesized # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP POLI_HUMAN Q9UNA4 1 ;MELADVGAAASSQGVHDQVLPTPNASSRVIVHVDLDCFYAQVEMISNPELKDKPLGVQQKYLVVTCNYEARKLGVKKLMN VRDAKEKCPQLVLVNGEDLTRYREMSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKRLQQLQSDELSAVTVSGHVYNN QSINLLDVLHIRLLVGSQIAAEMREAMYNQLGLTGCAGVASNKLLAKLVSGVFKPNQQTVLLPESCQHLIHSLNHIKEIP GIGYKTAKCLEALGINSVRDLQTFSPKILEKELGISVAQRIQKLSFGEDNSPVILSGPPQSFSEEDSFKKCSSEVEAKNK IEELLASLLNRVCQDGRKPHTVRLIIRRYSSEKHYGRESRQCPIPSHVIQKLGTGNYDVMTPMVDILMKLFRNMVNVKMP FHLTLLSVCFCNLKALNTAK ; 26 ? 2 PDB 4EYH 4EYH 2 GGGGTCCT ? ? 3 PDB 4EYH 4EYH 3 AGGACCC ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4EYH B 1 ? 420 ? Q9UNA4 26 ? 445 ? 1 420 2 2 4EYH T 1 ? 8 ? 4EYH 840 ? 847 ? 840 847 3 3 4EYH P 1 ? 7 ? 4EYH 867 ? 873 ? 867 873 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DCP non-polymer . "2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE" ? 'C9 H16 N3 O13 P3' 467.157 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DG8 'DNA linking' n ;2'-deoxy-8-(pyren-1-ylamino)guanosine 5'-(dihydrogen phosphate) ; ? 'C26 H23 N6 O7 P' 562.471 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4EYH _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.62 _exptl_crystal.density_percent_sol 53.09 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 291.15 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details '15% PEG 5000MME, 0.2 M MH4SO4, 0.1 M MES pH 6.5, 2.5% glycerol, VAPOR DIFFUSION, HANGING DROP, temperature 291.15K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2010-08-30 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97918 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 24-ID-E' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 24-ID-E _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97918 # _reflns.entry_id 4EYH _reflns.observed_criterion_sigma_I 1 _reflns.observed_criterion_sigma_F 1 _reflns.d_resolution_low 32.093 _reflns.d_resolution_high 2.9 _reflns.number_obs 12590 _reflns.number_all 13253 _reflns.percent_possible_obs 97.2 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 4EYH _refine.ls_number_reflns_obs 12590 _refine.ls_number_reflns_all 13253 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 32.093 _refine.ls_d_res_high 2.900 _refine.ls_percent_reflns_obs 97.54 _refine.ls_R_factor_obs 0.2419 _refine.ls_R_factor_all 0.2452 _refine.ls_R_factor_R_work 0.2386 _refine.ls_R_factor_R_free 0.2809 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 8.00 _refine.ls_number_reflns_R_free 1007 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] 0.3943 _refine.aniso_B[2][2] 0.3943 _refine.aniso_B[3][3] -0.7886 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][3] -0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.318 _refine.solvent_model_param_bsol 51.869 _refine.pdbx_solvent_vdw_probe_radii 1.30 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 1.06 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 3GV5' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.40 _refine.pdbx_overall_phase_error 29.38 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2848 _refine_hist.pdbx_number_atoms_nucleic_acid 326 _refine_hist.pdbx_number_atoms_ligand 31 _refine_hist.number_atoms_solvent 28 _refine_hist.number_atoms_total 3233 _refine_hist.d_res_high 2.900 _refine_hist.d_res_low 32.093 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.007 ? ? 3289 ? 'X-RAY DIFFRACTION' f_angle_d 1.117 ? ? 4530 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 19.129 ? ? 1235 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.060 ? ? 535 ? 'X-RAY DIFFRACTION' f_plane_restr 0.003 ? ? 525 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 2.900 3.0530 1610 0.3389 99.00 0.3890 . . 150 . . . . 'X-RAY DIFFRACTION' . 3.0530 3.2442 1629 0.3039 98.00 0.3335 . . 141 . . . . 'X-RAY DIFFRACTION' . 3.2442 3.4944 1621 0.2726 98.00 0.3340 . . 155 . . . . 'X-RAY DIFFRACTION' . 3.4944 3.8455 1640 0.2580 98.00 0.3296 . . 129 . . . . 'X-RAY DIFFRACTION' . 3.8455 4.4007 1643 0.2229 97.00 0.2290 . . 143 . . . . 'X-RAY DIFFRACTION' . 4.4007 5.5398 1677 0.2088 97.00 0.2539 . . 136 . . . . 'X-RAY DIFFRACTION' . 5.5398 32.0950 1763 0.2196 95.00 0.2585 . . 153 . . . . 'X-RAY DIFFRACTION' # _struct.entry_id 4EYH _struct.title 'Human DNA polymerase iota incorporating dCTP opposite N-(deoxyguanosin-8-yl)-1-aminopyrene lesion' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4EYH _struct_keywords.pdbx_keywords TRANSFERASE/DNA _struct_keywords.text 'DNA polymerase, TRANSFERASE-DNA complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 5 ? H N N 6 ? I N N 6 ? J N N 6 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 CYS A 37 ? ASN A 47 ? CYS B 37 ASN B 47 1 ? 11 HELX_P HELX_P2 2 VAL A 81 ? CYS A 88 ? VAL B 81 CYS B 88 1 ? 8 HELX_P HELX_P3 3 LEU A 99 ? GLU A 115 ? LEU B 99 GLU B 115 1 ? 17 HELX_P HELX_P4 4 LEU A 132 ? GLN A 141 ? LEU B 132 GLN B 141 1 ? 10 HELX_P HELX_P5 5 ASP A 146 ? VAL A 151 ? ASP B 146 VAL B 151 5 ? 6 HELX_P HELX_P6 6 ASN A 159 ? GLN A 161 ? ASN B 159 GLN B 161 5 ? 3 HELX_P HELX_P7 7 ASP A 167 ? GLY A 192 ? ASP B 167 GLY B 192 1 ? 26 HELX_P HELX_P8 8 ASN A 202 ? SER A 210 ? ASN B 202 SER B 210 1 ? 9 HELX_P HELX_P9 9 LEU A 222 ? GLU A 224 ? LEU B 222 GLU B 224 5 ? 3 HELX_P HELX_P10 10 SER A 225 ? SER A 232 ? SER B 225 SER B 232 1 ? 8 HELX_P HELX_P11 11 HIS A 235 ? ILE A 239 ? HIS B 235 ILE B 239 5 ? 5 HELX_P HELX_P12 12 GLY A 243 ? LEU A 253 ? GLY B 243 LEU B 253 1 ? 11 HELX_P HELX_P13 13 SER A 257 ? PHE A 264 ? SER B 257 PHE B 264 1 ? 8 HELX_P HELX_P14 14 SER A 265 ? GLY A 274 ? SER B 265 GLY B 274 1 ? 10 HELX_P HELX_P15 15 GLY A 274 ? LEU A 284 ? GLY B 274 LEU B 284 1 ? 11 HELX_P HELX_P16 16 SER A 285 ? GLY A 287 ? SER B 285 GLY B 287 5 ? 3 HELX_P HELX_P17 17 SER A 313 ? GLN A 334 ? SER B 313 GLN B 334 1 ? 22 HELX_P HELX_P18 18 VAL A 379 ? MET A 394 ? VAL B 379 MET B 394 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A ASP 34 OD1 ? ? ? 1_555 E MG . MG ? ? B ASP 34 B MG 502 1_555 ? ? ? ? ? ? ? 2.762 ? ? metalc2 metalc ? ? A ASP 34 OD1 ? ? ? 1_555 G MG . MG ? ? B ASP 34 B MG 504 1_555 ? ? ? ? ? ? ? 2.959 ? ? metalc3 metalc ? ? A LEU 35 O ? ? ? 1_555 E MG . MG ? ? B LEU 35 B MG 502 1_555 ? ? ? ? ? ? ? 2.923 ? ? metalc4 metalc ? ? A GLU 127 OE2 ? ? ? 1_555 G MG . MG ? ? B GLU 127 B MG 504 1_555 ? ? ? ? ? ? ? 2.626 ? ? metalc5 metalc ? ? A LYS 237 O ? ? ? 1_555 F MG . MG ? ? B LYS 237 B MG 503 1_555 ? ? ? ? ? ? ? 2.681 ? ? metalc6 metalc ? ? A ILE 239 O ? ? ? 1_555 F MG . MG ? ? B ILE 239 B MG 503 1_555 ? ? ? ? ? ? ? 2.894 ? ? metalc7 metalc ? ? A ILE 242 O ? ? ? 1_555 F MG . MG ? ? B ILE 242 B MG 503 1_555 ? ? ? ? ? ? ? 2.693 ? ? metalc8 metalc ? ? D DCP . O3G ? ? ? 1_555 E MG . MG ? ? B DCP 501 B MG 502 1_555 ? ? ? ? ? ? ? 2.522 ? ? metalc9 metalc ? ? D DCP . O2B ? ? ? 1_555 E MG . MG ? ? B DCP 501 B MG 502 1_555 ? ? ? ? ? ? ? 2.997 ? ? metalc10 metalc ? ? D DCP . O1A ? ? ? 1_555 G MG . MG ? ? B DCP 501 B MG 504 1_555 ? ? ? ? ? ? ? 2.781 ? ? metalc11 metalc ? ? E MG . MG ? ? ? 1_555 H HOH . O ? ? B MG 502 B HOH 601 1_555 ? ? ? ? ? ? ? 2.846 ? ? metalc12 metalc ? ? F MG . MG ? ? ? 1_555 H HOH . O ? ? B MG 503 B HOH 624 1_555 ? ? ? ? ? ? ? 2.006 ? ? metalc13 metalc ? ? F MG . MG ? ? ? 1_555 C DC 6 OP1 ? ? B MG 503 P DC 872 1_555 ? ? ? ? ? ? ? 2.613 ? ? metalc14 metalc ? ? F MG . MG ? ? ? 1_555 J HOH . O ? ? B MG 503 P HOH 901 1_555 ? ? ? ? ? ? ? 2.779 ? ? hydrog1 hydrog ? ? B DG 2 N1 ? ? ? 1_555 C DC 7 N3 ? ? T DG 841 P DC 873 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DG 2 N2 ? ? ? 1_555 C DC 7 O2 ? ? T DG 841 P DC 873 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DG 2 O6 ? ? ? 1_555 C DC 7 N4 ? ? T DG 841 P DC 873 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DG 3 N1 ? ? ? 1_555 C DC 6 N3 ? ? T DG 842 P DC 872 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DG 3 N2 ? ? ? 1_555 C DC 6 O2 ? ? T DG 842 P DC 872 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DG 3 O6 ? ? ? 1_555 C DC 6 N4 ? ? T DG 842 P DC 872 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DG 4 N1 ? ? ? 1_555 C DC 5 N3 ? ? T DG 843 P DC 871 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DG 4 N2 ? ? ? 1_555 C DC 5 O2 ? ? T DG 843 P DC 871 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DG 4 O6 ? ? ? 1_555 C DC 5 N4 ? ? T DG 843 P DC 871 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DT 5 N3 ? ? ? 1_555 C DA 4 N1 ? ? T DT 844 P DA 870 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DT 5 O4 ? ? ? 1_555 C DA 4 N6 ? ? T DT 844 P DA 870 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DC 6 N3 ? ? ? 1_555 C DG 3 N1 ? ? T DC 845 P DG 869 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DC 6 N4 ? ? ? 1_555 C DG 3 O6 ? ? T DC 845 P DG 869 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DC 6 O2 ? ? ? 1_555 C DG 3 N2 ? ? T DC 845 P DG 869 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DC 7 N3 ? ? ? 1_555 C DG 2 N1 ? ? T DC 846 P DG 868 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DC 7 N4 ? ? ? 1_555 C DG 2 O6 ? ? T DC 846 P DG 868 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DC 7 O2 ? ? ? 1_555 C DG 2 N2 ? ? T DC 846 P DG 868 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DT 8 N3 ? ? ? 1_555 C DA 1 N1 ? ? T DT 847 P DA 867 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DT 8 O4 ? ? ? 1_555 C DA 1 N6 ? ? T DT 847 P DA 867 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id LYS _struct_mon_prot_cis.label_seq_id 214 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id LYS _struct_mon_prot_cis.auth_seq_id 214 _struct_mon_prot_cis.auth_asym_id B _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 215 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 215 _struct_mon_prot_cis.pdbx_auth_asym_id_2 B _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -8.51 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 4 ? C ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? parallel A 5 6 ? parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 120 ? LEU A 123 ? VAL B 120 LEU B 123 A 2 GLU A 127 ? ASP A 131 ? GLU B 127 ASP B 131 A 3 ILE A 30 ? LEU A 35 ? ILE B 30 LEU B 35 A 4 GLY A 195 ? ALA A 200 ? GLY B 195 ALA B 200 A 5 GLN A 218 ? VAL A 220 ? GLN B 218 VAL B 220 A 6 HIS A 156 ? VAL A 157 ? HIS B 156 VAL B 157 B 1 MET A 79 ? ASN A 80 ? MET B 79 ASN B 80 B 2 LEU A 62 ? CYS A 66 ? LEU B 62 CYS B 66 B 3 LEU A 55 ? GLN A 59 ? LEU B 55 GLN B 59 B 4 VAL A 92 ? ASN A 95 ? VAL B 92 ASN B 95 C 1 PHE A 302 ? SER A 307 ? PHE B 302 SER B 307 C 2 LEU A 405 ? LEU A 413 ? LEU B 405 LEU B 413 C 3 PRO A 339 ? ARG A 347 ? PRO B 339 ARG B 347 C 4 SER A 359 ? PRO A 363 ? SER B 359 PRO B 363 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLU A 121 ? N GLU B 121 O PHE A 129 ? O PHE B 129 A 2 3 O ASN A 128 ? O ASN B 128 N VAL A 33 ? N VAL B 33 A 3 4 N ASP A 34 ? N ASP B 34 O CYS A 196 ? O CYS B 196 A 4 5 N ALA A 197 ? N ALA B 197 O THR A 219 ? O THR B 219 A 5 6 O GLN A 218 ? O GLN B 218 N HIS A 156 ? N HIS B 156 B 1 2 O MET A 79 ? O MET B 79 N VAL A 63 ? N VAL B 63 B 2 3 O LEU A 62 ? O LEU B 62 N GLN A 59 ? N GLN B 59 B 3 4 N GLN A 58 ? N GLN B 58 O VAL A 94 ? O VAL B 94 C 1 2 N ASP A 306 ? N ASP B 306 O LEU A 406 ? O LEU B 406 C 2 3 O SER A 407 ? O SER B 407 N ILE A 345 ? N ILE B 345 C 3 4 N LEU A 344 ? N LEU B 344 O ARG A 360 ? O ARG B 360 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B DCP 501 ? 16 'BINDING SITE FOR RESIDUE DCP B 501' AC2 Software B MG 502 ? 4 'BINDING SITE FOR RESIDUE MG B 502' AC3 Software B MG 503 ? 6 'BINDING SITE FOR RESIDUE MG B 503' AC4 Software B MG 504 ? 4 'BINDING SITE FOR RESIDUE MG B 504' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 16 LEU A 35 ? LEU B 35 . ? 1_555 ? 2 AC1 16 CYS A 37 ? CYS B 37 . ? 1_555 ? 3 AC1 16 PHE A 38 ? PHE B 38 . ? 1_555 ? 4 AC1 16 TYR A 39 ? TYR B 39 . ? 1_555 ? 5 AC1 16 VAL A 64 ? VAL B 64 . ? 1_555 ? 6 AC1 16 THR A 65 ? THR B 65 . ? 1_555 ? 7 AC1 16 TYR A 68 ? TYR B 68 . ? 1_555 ? 8 AC1 16 ARG A 71 ? ARG B 71 . ? 1_555 ? 9 AC1 16 LYS A 77 ? LYS B 77 . ? 1_555 ? 10 AC1 16 ASP A 126 ? ASP B 126 . ? 1_555 ? 11 AC1 16 LYS A 214 ? LYS B 214 . ? 1_555 ? 12 AC1 16 MG E . ? MG B 502 . ? 1_555 ? 13 AC1 16 MG G . ? MG B 504 . ? 1_555 ? 14 AC1 16 DC C 7 ? DC P 873 . ? 1_555 ? 15 AC1 16 DG8 B 1 ? DG8 T 840 . ? 1_555 ? 16 AC1 16 DG B 2 ? DG T 841 . ? 1_555 ? 17 AC2 4 ASP A 34 ? ASP B 34 . ? 1_555 ? 18 AC2 4 LEU A 35 ? LEU B 35 . ? 1_555 ? 19 AC2 4 DCP D . ? DCP B 501 . ? 1_555 ? 20 AC2 4 HOH H . ? HOH B 601 . ? 1_555 ? 21 AC3 6 LYS A 237 ? LYS B 237 . ? 1_555 ? 22 AC3 6 ILE A 239 ? ILE B 239 . ? 1_555 ? 23 AC3 6 ILE A 242 ? ILE B 242 . ? 1_555 ? 24 AC3 6 HOH H . ? HOH B 624 . ? 1_555 ? 25 AC3 6 DC C 6 ? DC P 872 . ? 1_555 ? 26 AC3 6 HOH J . ? HOH P 901 . ? 1_555 ? 27 AC4 4 ASP A 34 ? ASP B 34 . ? 1_555 ? 28 AC4 4 GLU A 127 ? GLU B 127 . ? 1_555 ? 29 AC4 4 DCP D . ? DCP B 501 . ? 1_555 ? 30 AC4 4 DC C 7 ? DC P 873 . ? 1_555 ? # _database_PDB_matrix.entry_id 4EYH _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4EYH _atom_sites.fract_transf_matrix[1][1] 0.010199 _atom_sites.fract_transf_matrix[1][2] 0.005889 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011777 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005137 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? B . n A 1 2 GLU 2 2 ? ? ? B . n A 1 3 LEU 3 3 ? ? ? B . n A 1 4 ALA 4 4 ? ? ? B . n A 1 5 ASP 5 5 ? ? ? B . n A 1 6 VAL 6 6 ? ? ? B . n A 1 7 GLY 7 7 ? ? ? B . n A 1 8 ALA 8 8 ? ? ? B . n A 1 9 ALA 9 9 ? ? ? B . n A 1 10 ALA 10 10 ? ? ? B . n A 1 11 SER 11 11 ? ? ? B . n A 1 12 SER 12 12 ? ? ? B . n A 1 13 GLN 13 13 ? ? ? B . n A 1 14 GLY 14 14 ? ? ? B . n A 1 15 VAL 15 15 ? ? ? B . n A 1 16 HIS 16 16 ? ? ? B . n A 1 17 ASP 17 17 ? ? ? B . n A 1 18 GLN 18 18 ? ? ? B . n A 1 19 VAL 19 19 ? ? ? B . n A 1 20 LEU 20 20 ? ? ? B . n A 1 21 PRO 21 21 ? ? ? B . n A 1 22 THR 22 22 ? ? ? B . n A 1 23 PRO 23 23 ? ? ? B . n A 1 24 ASN 24 24 ? ? ? B . n A 1 25 ALA 25 25 ? ? ? B . n A 1 26 SER 26 26 26 SER SER B . n A 1 27 SER 27 27 27 SER SER B . n A 1 28 ARG 28 28 28 ARG ARG B . n A 1 29 VAL 29 29 29 VAL VAL B . n A 1 30 ILE 30 30 30 ILE ILE B . n A 1 31 VAL 31 31 31 VAL VAL B . n A 1 32 HIS 32 32 32 HIS HIS B . n A 1 33 VAL 33 33 33 VAL VAL B . n A 1 34 ASP 34 34 34 ASP ASP B . n A 1 35 LEU 35 35 35 LEU LEU B . n A 1 36 ASP 36 36 36 ASP ASP B . n A 1 37 CYS 37 37 37 CYS CYS B . n A 1 38 PHE 38 38 38 PHE PHE B . n A 1 39 TYR 39 39 39 TYR TYR B . n A 1 40 ALA 40 40 40 ALA ALA B . n A 1 41 GLN 41 41 41 GLN GLN B . n A 1 42 VAL 42 42 42 VAL VAL B . n A 1 43 GLU 43 43 43 GLU GLU B . n A 1 44 MET 44 44 44 MET MET B . n A 1 45 ILE 45 45 45 ILE ILE B . n A 1 46 SER 46 46 46 SER SER B . n A 1 47 ASN 47 47 47 ASN ASN B . n A 1 48 PRO 48 48 48 PRO PRO B . n A 1 49 GLU 49 49 49 GLU GLU B . n A 1 50 LEU 50 50 50 LEU LEU B . n A 1 51 LYS 51 51 51 LYS LYS B . n A 1 52 ASP 52 52 52 ASP ASP B . n A 1 53 LYS 53 53 53 LYS LYS B . n A 1 54 PRO 54 54 54 PRO PRO B . n A 1 55 LEU 55 55 55 LEU LEU B . n A 1 56 GLY 56 56 56 GLY GLY B . n A 1 57 VAL 57 57 57 VAL VAL B . n A 1 58 GLN 58 58 58 GLN GLN B . n A 1 59 GLN 59 59 59 GLN GLN B . n A 1 60 LYS 60 60 60 LYS LYS B . n A 1 61 TYR 61 61 61 TYR TYR B . n A 1 62 LEU 62 62 62 LEU LEU B . n A 1 63 VAL 63 63 63 VAL VAL B . n A 1 64 VAL 64 64 64 VAL VAL B . n A 1 65 THR 65 65 65 THR THR B . n A 1 66 CYS 66 66 66 CYS CYS B . n A 1 67 ASN 67 67 67 ASN ASN B . n A 1 68 TYR 68 68 68 TYR TYR B . n A 1 69 GLU 69 69 69 GLU GLU B . n A 1 70 ALA 70 70 70 ALA ALA B . n A 1 71 ARG 71 71 71 ARG ARG B . n A 1 72 LYS 72 72 72 LYS LYS B . n A 1 73 LEU 73 73 73 LEU LEU B . n A 1 74 GLY 74 74 74 GLY GLY B . n A 1 75 VAL 75 75 75 VAL VAL B . n A 1 76 LYS 76 76 76 LYS LYS B . n A 1 77 LYS 77 77 77 LYS LYS B . n A 1 78 LEU 78 78 78 LEU LEU B . n A 1 79 MET 79 79 79 MET MET B . n A 1 80 ASN 80 80 80 ASN ASN B . n A 1 81 VAL 81 81 81 VAL VAL B . n A 1 82 ARG 82 82 82 ARG ARG B . n A 1 83 ASP 83 83 83 ASP ASP B . n A 1 84 ALA 84 84 84 ALA ALA B . n A 1 85 LYS 85 85 85 LYS LYS B . n A 1 86 GLU 86 86 86 GLU GLU B . n A 1 87 LYS 87 87 87 LYS LYS B . n A 1 88 CYS 88 88 88 CYS CYS B . n A 1 89 PRO 89 89 89 PRO PRO B . n A 1 90 GLN 90 90 90 GLN GLN B . n A 1 91 LEU 91 91 91 LEU LEU B . n A 1 92 VAL 92 92 92 VAL VAL B . n A 1 93 LEU 93 93 93 LEU LEU B . n A 1 94 VAL 94 94 94 VAL VAL B . n A 1 95 ASN 95 95 95 ASN ASN B . n A 1 96 GLY 96 96 96 GLY GLY B . n A 1 97 GLU 97 97 97 GLU GLU B . n A 1 98 ASP 98 98 98 ASP ASP B . n A 1 99 LEU 99 99 99 LEU LEU B . n A 1 100 THR 100 100 100 THR THR B . n A 1 101 ARG 101 101 101 ARG ARG B . n A 1 102 TYR 102 102 102 TYR TYR B . n A 1 103 ARG 103 103 103 ARG ARG B . n A 1 104 GLU 104 104 104 GLU GLU B . n A 1 105 MET 105 105 105 MET MET B . n A 1 106 SER 106 106 106 SER SER B . n A 1 107 TYR 107 107 107 TYR TYR B . n A 1 108 LYS 108 108 108 LYS LYS B . n A 1 109 VAL 109 109 109 VAL VAL B . n A 1 110 THR 110 110 110 THR THR B . n A 1 111 GLU 111 111 111 GLU GLU B . n A 1 112 LEU 112 112 112 LEU LEU B . n A 1 113 LEU 113 113 113 LEU LEU B . n A 1 114 GLU 114 114 114 GLU GLU B . n A 1 115 GLU 115 115 115 GLU GLU B . n A 1 116 PHE 116 116 116 PHE PHE B . n A 1 117 SER 117 117 117 SER SER B . n A 1 118 PRO 118 118 118 PRO PRO B . n A 1 119 VAL 119 119 119 VAL VAL B . n A 1 120 VAL 120 120 120 VAL VAL B . n A 1 121 GLU 121 121 121 GLU GLU B . n A 1 122 ARG 122 122 122 ARG ARG B . n A 1 123 LEU 123 123 123 LEU LEU B . n A 1 124 GLY 124 124 124 GLY GLY B . n A 1 125 PHE 125 125 125 PHE PHE B . n A 1 126 ASP 126 126 126 ASP ASP B . n A 1 127 GLU 127 127 127 GLU GLU B . n A 1 128 ASN 128 128 128 ASN ASN B . n A 1 129 PHE 129 129 129 PHE PHE B . n A 1 130 VAL 130 130 130 VAL VAL B . n A 1 131 ASP 131 131 131 ASP ASP B . n A 1 132 LEU 132 132 132 LEU LEU B . n A 1 133 THR 133 133 133 THR THR B . n A 1 134 GLU 134 134 134 GLU GLU B . n A 1 135 MET 135 135 135 MET MET B . n A 1 136 VAL 136 136 136 VAL VAL B . n A 1 137 GLU 137 137 137 GLU GLU B . n A 1 138 LYS 138 138 138 LYS LYS B . n A 1 139 ARG 139 139 139 ARG ARG B . n A 1 140 LEU 140 140 140 LEU LEU B . n A 1 141 GLN 141 141 141 GLN GLN B . n A 1 142 GLN 142 142 142 GLN GLN B . n A 1 143 LEU 143 143 143 LEU LEU B . n A 1 144 GLN 144 144 144 GLN GLN B . n A 1 145 SER 145 145 145 SER SER B . n A 1 146 ASP 146 146 146 ASP ASP B . n A 1 147 GLU 147 147 147 GLU GLU B . n A 1 148 LEU 148 148 148 LEU LEU B . n A 1 149 SER 149 149 149 SER SER B . n A 1 150 ALA 150 150 150 ALA ALA B . n A 1 151 VAL 151 151 151 VAL VAL B . n A 1 152 THR 152 152 152 THR THR B . n A 1 153 VAL 153 153 153 VAL VAL B . n A 1 154 SER 154 154 154 SER SER B . n A 1 155 GLY 155 155 155 GLY GLY B . n A 1 156 HIS 156 156 156 HIS HIS B . n A 1 157 VAL 157 157 157 VAL VAL B . n A 1 158 TYR 158 158 158 TYR TYR B . n A 1 159 ASN 159 159 159 ASN ASN B . n A 1 160 ASN 160 160 160 ASN ASN B . n A 1 161 GLN 161 161 161 GLN GLN B . n A 1 162 SER 162 162 162 SER SER B . n A 1 163 ILE 163 163 163 ILE ILE B . n A 1 164 ASN 164 164 164 ASN ASN B . n A 1 165 LEU 165 165 165 LEU LEU B . n A 1 166 LEU 166 166 166 LEU LEU B . n A 1 167 ASP 167 167 167 ASP ASP B . n A 1 168 VAL 168 168 168 VAL VAL B . n A 1 169 LEU 169 169 169 LEU LEU B . n A 1 170 HIS 170 170 170 HIS HIS B . n A 1 171 ILE 171 171 171 ILE ILE B . n A 1 172 ARG 172 172 172 ARG ARG B . n A 1 173 LEU 173 173 173 LEU LEU B . n A 1 174 LEU 174 174 174 LEU LEU B . n A 1 175 VAL 175 175 175 VAL VAL B . n A 1 176 GLY 176 176 176 GLY GLY B . n A 1 177 SER 177 177 177 SER SER B . n A 1 178 GLN 178 178 178 GLN GLN B . n A 1 179 ILE 179 179 179 ILE ILE B . n A 1 180 ALA 180 180 180 ALA ALA B . n A 1 181 ALA 181 181 181 ALA ALA B . n A 1 182 GLU 182 182 182 GLU GLU B . n A 1 183 MET 183 183 183 MET MET B . n A 1 184 ARG 184 184 184 ARG ARG B . n A 1 185 GLU 185 185 185 GLU GLU B . n A 1 186 ALA 186 186 186 ALA ALA B . n A 1 187 MET 187 187 187 MET MET B . n A 1 188 TYR 188 188 188 TYR TYR B . n A 1 189 ASN 189 189 189 ASN ASN B . n A 1 190 GLN 190 190 190 GLN GLN B . n A 1 191 LEU 191 191 191 LEU LEU B . n A 1 192 GLY 192 192 192 GLY GLY B . n A 1 193 LEU 193 193 193 LEU LEU B . n A 1 194 THR 194 194 194 THR THR B . n A 1 195 GLY 195 195 195 GLY GLY B . n A 1 196 CYS 196 196 196 CYS CYS B . n A 1 197 ALA 197 197 197 ALA ALA B . n A 1 198 GLY 198 198 198 GLY GLY B . n A 1 199 VAL 199 199 199 VAL VAL B . n A 1 200 ALA 200 200 200 ALA ALA B . n A 1 201 SER 201 201 201 SER SER B . n A 1 202 ASN 202 202 202 ASN ASN B . n A 1 203 LYS 203 203 203 LYS LYS B . n A 1 204 LEU 204 204 204 LEU LEU B . n A 1 205 LEU 205 205 205 LEU LEU B . n A 1 206 ALA 206 206 206 ALA ALA B . n A 1 207 LYS 207 207 207 LYS LYS B . n A 1 208 LEU 208 208 208 LEU LEU B . n A 1 209 VAL 209 209 209 VAL VAL B . n A 1 210 SER 210 210 210 SER SER B . n A 1 211 GLY 211 211 211 GLY GLY B . n A 1 212 VAL 212 212 212 VAL VAL B . n A 1 213 PHE 213 213 213 PHE PHE B . n A 1 214 LYS 214 214 214 LYS LYS B . n A 1 215 PRO 215 215 215 PRO PRO B . n A 1 216 ASN 216 216 216 ASN ASN B . n A 1 217 GLN 217 217 217 GLN GLN B . n A 1 218 GLN 218 218 218 GLN GLN B . n A 1 219 THR 219 219 219 THR THR B . n A 1 220 VAL 220 220 220 VAL VAL B . n A 1 221 LEU 221 221 221 LEU LEU B . n A 1 222 LEU 222 222 222 LEU LEU B . n A 1 223 PRO 223 223 223 PRO PRO B . n A 1 224 GLU 224 224 224 GLU GLU B . n A 1 225 SER 225 225 225 SER SER B . n A 1 226 CYS 226 226 226 CYS CYS B . n A 1 227 GLN 227 227 227 GLN GLN B . n A 1 228 HIS 228 228 228 HIS HIS B . n A 1 229 LEU 229 229 229 LEU LEU B . n A 1 230 ILE 230 230 230 ILE ILE B . n A 1 231 HIS 231 231 231 HIS HIS B . n A 1 232 SER 232 232 232 SER SER B . n A 1 233 LEU 233 233 233 LEU LEU B . n A 1 234 ASN 234 234 234 ASN ASN B . n A 1 235 HIS 235 235 235 HIS HIS B . n A 1 236 ILE 236 236 236 ILE ILE B . n A 1 237 LYS 237 237 237 LYS LYS B . n A 1 238 GLU 238 238 238 GLU GLU B . n A 1 239 ILE 239 239 239 ILE ILE B . n A 1 240 PRO 240 240 240 PRO PRO B . n A 1 241 GLY 241 241 241 GLY GLY B . n A 1 242 ILE 242 242 242 ILE ILE B . n A 1 243 GLY 243 243 243 GLY GLY B . n A 1 244 TYR 244 244 244 TYR TYR B . n A 1 245 LYS 245 245 245 LYS LYS B . n A 1 246 THR 246 246 246 THR THR B . n A 1 247 ALA 247 247 247 ALA ALA B . n A 1 248 LYS 248 248 248 LYS LYS B . n A 1 249 CYS 249 249 249 CYS CYS B . n A 1 250 LEU 250 250 250 LEU LEU B . n A 1 251 GLU 251 251 251 GLU GLU B . n A 1 252 ALA 252 252 252 ALA ALA B . n A 1 253 LEU 253 253 253 LEU LEU B . n A 1 254 GLY 254 254 254 GLY GLY B . n A 1 255 ILE 255 255 255 ILE ILE B . n A 1 256 ASN 256 256 256 ASN ASN B . n A 1 257 SER 257 257 257 SER SER B . n A 1 258 VAL 258 258 258 VAL VAL B . n A 1 259 ARG 259 259 259 ARG ARG B . n A 1 260 ASP 260 260 260 ASP ASP B . n A 1 261 LEU 261 261 261 LEU LEU B . n A 1 262 GLN 262 262 262 GLN GLN B . n A 1 263 THR 263 263 263 THR THR B . n A 1 264 PHE 264 264 264 PHE PHE B . n A 1 265 SER 265 265 265 SER SER B . n A 1 266 PRO 266 266 266 PRO PRO B . n A 1 267 LYS 267 267 267 LYS LYS B . n A 1 268 ILE 268 268 268 ILE ILE B . n A 1 269 LEU 269 269 269 LEU LEU B . n A 1 270 GLU 270 270 270 GLU GLU B . n A 1 271 LYS 271 271 271 LYS LYS B . n A 1 272 GLU 272 272 272 GLU GLU B . n A 1 273 LEU 273 273 273 LEU LEU B . n A 1 274 GLY 274 274 274 GLY GLY B . n A 1 275 ILE 275 275 275 ILE ILE B . n A 1 276 SER 276 276 276 SER SER B . n A 1 277 VAL 277 277 277 VAL VAL B . n A 1 278 ALA 278 278 278 ALA ALA B . n A 1 279 GLN 279 279 279 GLN GLN B . n A 1 280 ARG 280 280 280 ARG ARG B . n A 1 281 ILE 281 281 281 ILE ILE B . n A 1 282 GLN 282 282 282 GLN GLN B . n A 1 283 LYS 283 283 283 LYS LYS B . n A 1 284 LEU 284 284 284 LEU LEU B . n A 1 285 SER 285 285 285 SER SER B . n A 1 286 PHE 286 286 286 PHE PHE B . n A 1 287 GLY 287 287 287 GLY GLY B . n A 1 288 GLU 288 288 288 GLU GLU B . n A 1 289 ASP 289 289 289 ASP ASP B . n A 1 290 ASN 290 290 290 ASN ASN B . n A 1 291 SER 291 291 291 SER SER B . n A 1 292 PRO 292 292 292 PRO PRO B . n A 1 293 VAL 293 293 293 VAL VAL B . n A 1 294 ILE 294 294 294 ILE ILE B . n A 1 295 LEU 295 295 295 LEU LEU B . n A 1 296 SER 296 296 296 SER SER B . n A 1 297 GLY 297 297 297 GLY GLY B . n A 1 298 PRO 298 298 298 PRO PRO B . n A 1 299 PRO 299 299 299 PRO PRO B . n A 1 300 GLN 300 300 300 GLN GLN B . n A 1 301 SER 301 301 301 SER SER B . n A 1 302 PHE 302 302 302 PHE PHE B . n A 1 303 SER 303 303 303 SER SER B . n A 1 304 GLU 304 304 304 GLU GLU B . n A 1 305 GLU 305 305 305 GLU GLU B . n A 1 306 ASP 306 306 306 ASP ASP B . n A 1 307 SER 307 307 307 SER SER B . n A 1 308 PHE 308 308 308 PHE PHE B . n A 1 309 LYS 309 309 309 LYS LYS B . n A 1 310 LYS 310 310 310 LYS LYS B . n A 1 311 CYS 311 311 311 CYS CYS B . n A 1 312 SER 312 312 312 SER SER B . n A 1 313 SER 313 313 313 SER SER B . n A 1 314 GLU 314 314 314 GLU GLU B . n A 1 315 VAL 315 315 315 VAL VAL B . n A 1 316 GLU 316 316 316 GLU GLU B . n A 1 317 ALA 317 317 317 ALA ALA B . n A 1 318 LYS 318 318 318 LYS LYS B . n A 1 319 ASN 319 319 319 ASN ASN B . n A 1 320 LYS 320 320 320 LYS LYS B . n A 1 321 ILE 321 321 321 ILE ILE B . n A 1 322 GLU 322 322 322 GLU GLU B . n A 1 323 GLU 323 323 323 GLU GLU B . n A 1 324 LEU 324 324 324 LEU LEU B . n A 1 325 LEU 325 325 325 LEU LEU B . n A 1 326 ALA 326 326 326 ALA ALA B . n A 1 327 SER 327 327 327 SER SER B . n A 1 328 LEU 328 328 328 LEU LEU B . n A 1 329 LEU 329 329 329 LEU LEU B . n A 1 330 ASN 330 330 330 ASN ASN B . n A 1 331 ARG 331 331 331 ARG ARG B . n A 1 332 VAL 332 332 332 VAL ALA B . n A 1 333 CYS 333 333 333 CYS CYS B . n A 1 334 GLN 334 334 334 GLN ALA B . n A 1 335 ASP 335 335 335 ASP ASP B . n A 1 336 GLY 336 336 336 GLY GLY B . n A 1 337 ARG 337 337 337 ARG ARG B . n A 1 338 LYS 338 338 338 LYS ALA B . n A 1 339 PRO 339 339 339 PRO PRO B . n A 1 340 HIS 340 340 340 HIS HIS B . n A 1 341 THR 341 341 341 THR THR B . n A 1 342 VAL 342 342 342 VAL VAL B . n A 1 343 ARG 343 343 343 ARG ARG B . n A 1 344 LEU 344 344 344 LEU LEU B . n A 1 345 ILE 345 345 345 ILE ILE B . n A 1 346 ILE 346 346 346 ILE ILE B . n A 1 347 ARG 347 347 347 ARG ARG B . n A 1 348 ARG 348 348 348 ARG ARG B . n A 1 349 TYR 349 349 ? ? ? B . n A 1 350 SER 350 350 ? ? ? B . n A 1 351 SER 351 351 ? ? ? B . n A 1 352 GLU 352 352 ? ? ? B . n A 1 353 LYS 353 353 ? ? ? B . n A 1 354 HIS 354 354 ? ? ? B . n A 1 355 TYR 355 355 ? ? ? B . n A 1 356 GLY 356 356 356 GLY GLY B . n A 1 357 ARG 357 357 357 ARG ARG B . n A 1 358 GLU 358 358 358 GLU GLU B . n A 1 359 SER 359 359 359 SER SER B . n A 1 360 ARG 360 360 360 ARG ARG B . n A 1 361 GLN 361 361 361 GLN GLN B . n A 1 362 CYS 362 362 362 CYS CYS B . n A 1 363 PRO 363 363 363 PRO PRO B . n A 1 364 ILE 364 364 364 ILE ILE B . n A 1 365 PRO 365 365 365 PRO PRO B . n A 1 366 SER 366 366 366 SER SER B . n A 1 367 HIS 367 367 367 HIS HIS B . n A 1 368 VAL 368 368 368 VAL VAL B . n A 1 369 ILE 369 369 369 ILE ILE B . n A 1 370 GLN 370 370 370 GLN GLN B . n A 1 371 LYS 371 371 371 LYS LYS B . n A 1 372 LEU 372 372 ? ? ? B . n A 1 373 GLY 373 373 ? ? ? B . n A 1 374 THR 374 374 ? ? ? B . n A 1 375 GLY 375 375 ? ? ? B . n A 1 376 ASN 376 376 ? ? ? B . n A 1 377 TYR 377 377 377 TYR TYR B . n A 1 378 ASP 378 378 378 ASP ASP B . n A 1 379 VAL 379 379 379 VAL VAL B . n A 1 380 MET 380 380 380 MET MET B . n A 1 381 THR 381 381 381 THR THR B . n A 1 382 PRO 382 382 382 PRO PRO B . n A 1 383 MET 383 383 383 MET MET B . n A 1 384 VAL 384 384 384 VAL VAL B . n A 1 385 ASP 385 385 385 ASP ASP B . n A 1 386 ILE 386 386 386 ILE ILE B . n A 1 387 LEU 387 387 387 LEU LEU B . n A 1 388 MET 388 388 388 MET MET B . n A 1 389 LYS 389 389 389 LYS LYS B . n A 1 390 LEU 390 390 390 LEU LEU B . n A 1 391 PHE 391 391 391 PHE PHE B . n A 1 392 ARG 392 392 392 ARG ARG B . n A 1 393 ASN 393 393 393 ASN ASN B . n A 1 394 MET 394 394 394 MET MET B . n A 1 395 VAL 395 395 395 VAL VAL B . n A 1 396 ASN 396 396 396 ASN ASN B . n A 1 397 VAL 397 397 397 VAL VAL B . n A 1 398 LYS 398 398 398 LYS LYS B . n A 1 399 MET 399 399 399 MET MET B . n A 1 400 PRO 400 400 400 PRO PRO B . n A 1 401 PHE 401 401 401 PHE PHE B . n A 1 402 HIS 402 402 402 HIS HIS B . n A 1 403 LEU 403 403 403 LEU LEU B . n A 1 404 THR 404 404 404 THR THR B . n A 1 405 LEU 405 405 405 LEU LEU B . n A 1 406 LEU 406 406 406 LEU LEU B . n A 1 407 SER 407 407 407 SER SER B . n A 1 408 VAL 408 408 408 VAL VAL B . n A 1 409 CYS 409 409 409 CYS CYS B . n A 1 410 PHE 410 410 410 PHE PHE B . n A 1 411 CYS 411 411 411 CYS CYS B . n A 1 412 ASN 412 412 412 ASN ASN B . n A 1 413 LEU 413 413 413 LEU LEU B . n A 1 414 LYS 414 414 414 LYS LYS B . n A 1 415 ALA 415 415 ? ? ? B . n A 1 416 LEU 416 416 ? ? ? B . n A 1 417 ASN 417 417 ? ? ? B . n A 1 418 THR 418 418 ? ? ? B . n A 1 419 ALA 419 419 ? ? ? B . n A 1 420 LYS 420 420 ? ? ? B . n B 2 1 DG8 1 840 840 DG8 DG8 T . n B 2 2 DG 2 841 841 DG GD T . n B 2 3 DG 3 842 842 DG GD T . n B 2 4 DG 4 843 843 DG GD T . n B 2 5 DT 5 844 844 DT TD T . n B 2 6 DC 6 845 845 DC CD T . n B 2 7 DC 7 846 846 DC CD T . n B 2 8 DT 8 847 847 DT TD T . n C 3 1 DA 1 867 867 DA AD P . n C 3 2 DG 2 868 868 DG GD P . n C 3 3 DG 3 869 869 DG GD P . n C 3 4 DA 4 870 870 DA AD P . n C 3 5 DC 5 871 871 DC CD P . n C 3 6 DC 6 872 872 DC CD P . n C 3 7 DC 7 873 873 DC CD P . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 DCP 1 501 875 DCP CTP B . E 5 MG 1 502 1 MG MG B . F 5 MG 1 503 1 MG MG B . G 5 MG 1 504 1 MG MG B . H 6 HOH 1 601 4 HOH HOH B . H 6 HOH 2 602 5 HOH HOH B . H 6 HOH 3 603 6 HOH HOH B . H 6 HOH 4 604 7 HOH HOH B . H 6 HOH 5 605 8 HOH HOH B . H 6 HOH 6 606 9 HOH HOH B . H 6 HOH 7 607 11 HOH HOH B . H 6 HOH 8 608 14 HOH HOH B . H 6 HOH 9 609 17 HOH HOH B . H 6 HOH 10 610 21 HOH HOH B . H 6 HOH 11 611 22 HOH HOH B . H 6 HOH 12 612 23 HOH HOH B . H 6 HOH 13 613 25 HOH HOH B . H 6 HOH 14 614 26 HOH HOH B . H 6 HOH 15 615 29 HOH HOH B . H 6 HOH 16 616 31 HOH HOH B . H 6 HOH 17 617 32 HOH HOH B . H 6 HOH 18 618 33 HOH HOH B . H 6 HOH 19 619 35 HOH HOH B . H 6 HOH 20 620 36 HOH HOH B . H 6 HOH 21 621 37 HOH HOH B . H 6 HOH 22 622 38 HOH HOH B . H 6 HOH 23 623 39 HOH HOH B . H 6 HOH 24 624 40 HOH HOH B . H 6 HOH 25 625 41 HOH HOH B . I 6 HOH 1 901 3 HOH HOH T . I 6 HOH 2 902 34 HOH HOH T . J 6 HOH 1 901 30 HOH HOH P . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id B _pdbx_struct_mod_residue.label_comp_id DG8 _pdbx_struct_mod_residue.label_seq_id 1 _pdbx_struct_mod_residue.auth_asym_id T _pdbx_struct_mod_residue.auth_comp_id DG8 _pdbx_struct_mod_residue.auth_seq_id 840 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id DG _pdbx_struct_mod_residue.details ? # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4410 ? 1 MORE -56 ? 1 'SSA (A^2)' 19500 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD1 ? A ASP 34 ? B ASP 34 ? 1_555 MG ? E MG . ? B MG 502 ? 1_555 O ? A LEU 35 ? B LEU 35 ? 1_555 98.7 ? 2 OD1 ? A ASP 34 ? B ASP 34 ? 1_555 MG ? E MG . ? B MG 502 ? 1_555 O3G ? D DCP . ? B DCP 501 ? 1_555 130.3 ? 3 O ? A LEU 35 ? B LEU 35 ? 1_555 MG ? E MG . ? B MG 502 ? 1_555 O3G ? D DCP . ? B DCP 501 ? 1_555 107.2 ? 4 OD1 ? A ASP 34 ? B ASP 34 ? 1_555 MG ? E MG . ? B MG 502 ? 1_555 O2B ? D DCP . ? B DCP 501 ? 1_555 93.6 ? 5 O ? A LEU 35 ? B LEU 35 ? 1_555 MG ? E MG . ? B MG 502 ? 1_555 O2B ? D DCP . ? B DCP 501 ? 1_555 61.4 ? 6 O3G ? D DCP . ? B DCP 501 ? 1_555 MG ? E MG . ? B MG 502 ? 1_555 O2B ? D DCP . ? B DCP 501 ? 1_555 65.0 ? 7 OD1 ? A ASP 34 ? B ASP 34 ? 1_555 MG ? E MG . ? B MG 502 ? 1_555 O ? H HOH . ? B HOH 601 ? 1_555 134.0 ? 8 O ? A LEU 35 ? B LEU 35 ? 1_555 MG ? E MG . ? B MG 502 ? 1_555 O ? H HOH . ? B HOH 601 ? 1_555 101.0 ? 9 O3G ? D DCP . ? B DCP 501 ? 1_555 MG ? E MG . ? B MG 502 ? 1_555 O ? H HOH . ? B HOH 601 ? 1_555 81.7 ? 10 O2B ? D DCP . ? B DCP 501 ? 1_555 MG ? E MG . ? B MG 502 ? 1_555 O ? H HOH . ? B HOH 601 ? 1_555 132.3 ? 11 OD1 ? A ASP 34 ? B ASP 34 ? 1_555 MG ? G MG . ? B MG 504 ? 1_555 OE2 ? A GLU 127 ? B GLU 127 ? 1_555 79.4 ? 12 OD1 ? A ASP 34 ? B ASP 34 ? 1_555 MG ? G MG . ? B MG 504 ? 1_555 O1A ? D DCP . ? B DCP 501 ? 1_555 94.0 ? 13 OE2 ? A GLU 127 ? B GLU 127 ? 1_555 MG ? G MG . ? B MG 504 ? 1_555 O1A ? D DCP . ? B DCP 501 ? 1_555 112.5 ? 14 O ? A LYS 237 ? B LYS 237 ? 1_555 MG ? F MG . ? B MG 503 ? 1_555 O ? A ILE 239 ? B ILE 239 ? 1_555 102.5 ? 15 O ? A LYS 237 ? B LYS 237 ? 1_555 MG ? F MG . ? B MG 503 ? 1_555 O ? A ILE 242 ? B ILE 242 ? 1_555 86.5 ? 16 O ? A ILE 239 ? B ILE 239 ? 1_555 MG ? F MG . ? B MG 503 ? 1_555 O ? A ILE 242 ? B ILE 242 ? 1_555 79.5 ? 17 O ? A LYS 237 ? B LYS 237 ? 1_555 MG ? F MG . ? B MG 503 ? 1_555 O ? H HOH . ? B HOH 624 ? 1_555 90.0 ? 18 O ? A ILE 239 ? B ILE 239 ? 1_555 MG ? F MG . ? B MG 503 ? 1_555 O ? H HOH . ? B HOH 624 ? 1_555 150.1 ? 19 O ? A ILE 242 ? B ILE 242 ? 1_555 MG ? F MG . ? B MG 503 ? 1_555 O ? H HOH . ? B HOH 624 ? 1_555 74.1 ? 20 O ? A LYS 237 ? B LYS 237 ? 1_555 MG ? F MG . ? B MG 503 ? 1_555 OP1 ? C DC 6 ? P DC 872 ? 1_555 169.6 ? 21 O ? A ILE 239 ? B ILE 239 ? 1_555 MG ? F MG . ? B MG 503 ? 1_555 OP1 ? C DC 6 ? P DC 872 ? 1_555 81.2 ? 22 O ? A ILE 242 ? B ILE 242 ? 1_555 MG ? F MG . ? B MG 503 ? 1_555 OP1 ? C DC 6 ? P DC 872 ? 1_555 84.6 ? 23 O ? H HOH . ? B HOH 624 ? 1_555 MG ? F MG . ? B MG 503 ? 1_555 OP1 ? C DC 6 ? P DC 872 ? 1_555 82.4 ? 24 O ? A LYS 237 ? B LYS 237 ? 1_555 MG ? F MG . ? B MG 503 ? 1_555 O ? J HOH . ? P HOH 901 ? 1_555 106.0 ? 25 O ? A ILE 239 ? B ILE 239 ? 1_555 MG ? F MG . ? B MG 503 ? 1_555 O ? J HOH . ? P HOH 901 ? 1_555 111.4 ? 26 O ? A ILE 242 ? B ILE 242 ? 1_555 MG ? F MG . ? B MG 503 ? 1_555 O ? J HOH . ? P HOH 901 ? 1_555 160.4 ? 27 O ? H HOH . ? B HOH 624 ? 1_555 MG ? F MG . ? B MG 503 ? 1_555 O ? J HOH . ? P HOH 901 ? 1_555 90.6 ? 28 OP1 ? C DC 6 ? P DC 872 ? 1_555 MG ? F MG . ? B MG 503 ? 1_555 O ? J HOH . ? P HOH 901 ? 1_555 81.2 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-01-09 2 'Structure model' 1 1 2013-02-20 3 'Structure model' 1 2 2023-09-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' pdbx_struct_conn_angle 6 3 'Structure model' struct_conn 7 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 11 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 12 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 13 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 14 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 15 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 16 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 17 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 18 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 19 3 'Structure model' '_pdbx_struct_conn_angle.value' 20 3 'Structure model' '_struct_conn.pdbx_dist_value' 21 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 22 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 23 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 24 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 25 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 26 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 27 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 28 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 29 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 30 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 31 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 32 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 33 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 34 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' 35 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 36 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 37 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined -9.5332 19.9471 -14.3959 0.5839 0.6596 0.7271 -0.0229 -0.1258 0.0582 2.2131 3.8136 1.5832 0.7121 1.2648 -4.2445 0.1401 0.6093 0.4446 -0.3432 -0.5042 -0.3330 0.6130 -0.0581 -0.0000 'X-RAY DIFFRACTION' 2 ? refined 6.6464 14.8527 -23.2468 1.4231 1.5535 1.2872 0.3025 0.2213 0.2193 0.4399 0.4249 0.6942 -0.3821 -0.1134 -0.6122 -0.2484 -0.5546 -0.9659 -0.8892 -0.5887 -0.7477 0.6259 0.6686 0.0000 'X-RAY DIFFRACTION' 3 ? refined -17.5175 19.9423 -6.6105 0.7143 0.6150 0.7266 -0.0269 -0.1326 -0.0948 2.9623 2.8378 3.9076 -0.2930 0.7583 -1.1747 -0.0373 -0.0694 0.0378 0.0908 -0.2342 0.3272 0.1660 -0.5097 0.0000 'X-RAY DIFFRACTION' 4 ? refined -3.5049 30.7500 -1.5750 0.6714 0.6521 0.6790 0.0170 -0.1228 0.0342 2.0857 3.3647 3.3204 1.6391 1.9054 1.6542 -0.0259 0.0400 0.1968 0.1120 -0.1645 -0.3257 -0.2682 0.1886 0.0000 'X-RAY DIFFRACTION' 5 ? refined -3.9659 44.0685 -34.3043 1.0780 1.2887 0.9563 0.2411 -0.0012 0.1338 1.3900 3.6160 6.8327 -0.8004 -0.6575 -2.0304 0.6078 0.4206 -0.2695 -0.3722 -0.0935 0.0131 0.5636 0.7622 0.0000 'X-RAY DIFFRACTION' 6 ? refined -2.4863 40.0529 -17.1446 0.9753 0.9321 1.1115 0.0349 -0.0946 0.1369 0.3438 2.2738 0.7644 1.6531 1.5748 -2.3404 -0.2901 0.7975 -0.4333 -0.5646 0.4337 -0.2264 0.1651 0.2173 0.0000 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? '(chain B and resid 26:46)' 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? '(chain B and resid 47:94)' 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? '(chain B and resid 95:187)' 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? '(chain B and resid 188:301)' 'X-RAY DIFFRACTION' 5 5 ? ? ? ? ? ? ? ? ? '(chain B and resid 302:414)' 'X-RAY DIFFRACTION' 6 6 ? ? ? ? ? ? ? ? ? '(chain T or chain P)' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal ADSC 'data collection' Quantum ? 1 PHASER phasing . ? 2 PHENIX refinement '(phenix.refine: 1.6.4_486)' ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C3'" T DG 841 ? ? "C2'" T DG 841 ? ? "C1'" T DG 841 ? ? 96.32 102.40 -6.08 0.80 N 2 1 "O4'" T DG 841 ? ? "C1'" T DG 841 ? ? N9 T DG 841 ? ? 113.04 108.30 4.74 0.30 N 3 1 "C3'" T DT 847 ? ? "C2'" T DT 847 ? ? "C1'" T DT 847 ? ? 97.34 102.40 -5.06 0.80 N 4 1 "O4'" P DC 872 ? ? "C4'" P DC 872 ? ? "C3'" P DC 872 ? ? 101.41 104.50 -3.09 0.40 N 5 1 "O4'" P DC 872 ? ? "C1'" P DC 872 ? ? N1 P DC 872 ? ? 110.62 108.30 2.32 0.30 N 6 1 "O4'" P DC 873 ? ? "C1'" P DC 873 ? ? N1 P DC 873 ? ? 110.72 108.30 2.42 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 CYS B 37 ? ? 19.81 83.29 2 1 GLU B 49 ? ? -58.09 26.51 3 1 LYS B 60 ? ? 54.54 -122.00 4 1 CYS B 66 ? ? 179.31 144.25 5 1 VAL B 75 ? ? -36.46 148.42 6 1 ALA B 84 ? ? -46.08 -73.16 7 1 CYS B 88 ? ? -157.45 74.25 8 1 GLN B 90 ? ? -89.40 48.28 9 1 GLN B 141 ? ? -66.82 14.18 10 1 ASN B 234 ? ? -98.34 -68.16 11 1 PHE B 308 ? ? 174.98 172.06 12 1 CYS B 311 ? ? -168.28 105.19 13 1 CYS B 333 ? ? -53.60 -85.29 14 1 GLN B 334 ? ? -32.26 -103.38 15 1 ASP B 335 ? ? 26.47 -86.39 16 1 ARG B 337 ? ? -29.08 155.10 17 1 ILE B 369 ? ? -55.32 89.49 18 1 GLN B 370 ? ? 178.04 108.69 19 1 VAL B 379 ? ? -140.27 -20.89 20 1 PHE B 391 ? ? -58.39 -4.69 21 1 CYS B 411 ? ? -152.85 -158.06 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 B ASN 47 ? CG ? A ASN 47 CG 2 1 Y 1 B ASN 47 ? OD1 ? A ASN 47 OD1 3 1 Y 1 B ASN 47 ? ND2 ? A ASN 47 ND2 4 1 Y 1 B GLU 49 ? CG ? A GLU 49 CG 5 1 Y 1 B GLU 49 ? CD ? A GLU 49 CD 6 1 Y 1 B GLU 49 ? OE1 ? A GLU 49 OE1 7 1 Y 1 B GLU 49 ? OE2 ? A GLU 49 OE2 8 1 Y 1 B LYS 51 ? CG ? A LYS 51 CG 9 1 Y 1 B LYS 51 ? CD ? A LYS 51 CD 10 1 Y 1 B LYS 51 ? CE ? A LYS 51 CE 11 1 Y 1 B LYS 51 ? NZ ? A LYS 51 NZ 12 1 Y 1 B ASP 52 ? CG ? A ASP 52 CG 13 1 Y 1 B ASP 52 ? OD1 ? A ASP 52 OD1 14 1 Y 1 B ASP 52 ? OD2 ? A ASP 52 OD2 15 1 Y 1 B LYS 53 ? CG ? A LYS 53 CG 16 1 Y 1 B LYS 53 ? CD ? A LYS 53 CD 17 1 Y 1 B LYS 53 ? CE ? A LYS 53 CE 18 1 Y 1 B LYS 53 ? NZ ? A LYS 53 NZ 19 1 Y 1 B LYS 72 ? CG ? A LYS 72 CG 20 1 Y 1 B LYS 72 ? CD ? A LYS 72 CD 21 1 Y 1 B LYS 72 ? CE ? A LYS 72 CE 22 1 Y 1 B LYS 72 ? NZ ? A LYS 72 NZ 23 1 Y 1 B LYS 76 ? CG ? A LYS 76 CG 24 1 Y 1 B LYS 76 ? CD ? A LYS 76 CD 25 1 Y 1 B LYS 76 ? CE ? A LYS 76 CE 26 1 Y 1 B LYS 76 ? NZ ? A LYS 76 NZ 27 1 Y 1 B ARG 82 ? CG ? A ARG 82 CG 28 1 Y 1 B ARG 82 ? CD ? A ARG 82 CD 29 1 Y 1 B ARG 82 ? NE ? A ARG 82 NE 30 1 Y 1 B ARG 82 ? CZ ? A ARG 82 CZ 31 1 Y 1 B ARG 82 ? NH1 ? A ARG 82 NH1 32 1 Y 1 B ARG 82 ? NH2 ? A ARG 82 NH2 33 1 Y 1 B LYS 85 ? CE ? A LYS 85 CE 34 1 Y 1 B LYS 85 ? NZ ? A LYS 85 NZ 35 1 Y 1 B GLU 86 ? CG ? A GLU 86 CG 36 1 Y 1 B GLU 86 ? CD ? A GLU 86 CD 37 1 Y 1 B GLU 86 ? OE1 ? A GLU 86 OE1 38 1 Y 1 B GLU 86 ? OE2 ? A GLU 86 OE2 39 1 Y 1 B LYS 87 ? CG ? A LYS 87 CG 40 1 Y 1 B LYS 87 ? CD ? A LYS 87 CD 41 1 Y 1 B LYS 87 ? CE ? A LYS 87 CE 42 1 Y 1 B LYS 87 ? NZ ? A LYS 87 NZ 43 1 Y 1 B GLN 141 ? CG ? A GLN 141 CG 44 1 Y 1 B GLN 141 ? CD ? A GLN 141 CD 45 1 Y 1 B GLN 141 ? OE1 ? A GLN 141 OE1 46 1 Y 1 B GLN 141 ? NE2 ? A GLN 141 NE2 47 1 Y 1 B GLN 144 ? CG ? A GLN 144 CG 48 1 Y 1 B GLN 144 ? CD ? A GLN 144 CD 49 1 Y 1 B GLN 144 ? OE1 ? A GLN 144 OE1 50 1 Y 1 B GLN 144 ? NE2 ? A GLN 144 NE2 51 1 Y 1 B SER 145 ? OG ? A SER 145 OG 52 1 Y 1 B ASP 146 ? CG ? A ASP 146 CG 53 1 Y 1 B ASP 146 ? OD1 ? A ASP 146 OD1 54 1 Y 1 B ASP 146 ? OD2 ? A ASP 146 OD2 55 1 Y 1 B LYS 248 ? CD ? A LYS 248 CD 56 1 Y 1 B LYS 248 ? CE ? A LYS 248 CE 57 1 Y 1 B LYS 248 ? NZ ? A LYS 248 NZ 58 1 Y 1 B LYS 271 ? CG ? A LYS 271 CG 59 1 Y 1 B LYS 271 ? CD ? A LYS 271 CD 60 1 Y 1 B LYS 271 ? CE ? A LYS 271 CE 61 1 Y 1 B LYS 271 ? NZ ? A LYS 271 NZ 62 1 Y 1 B LYS 309 ? CG ? A LYS 309 CG 63 1 Y 1 B LYS 309 ? CD ? A LYS 309 CD 64 1 Y 1 B LYS 309 ? CE ? A LYS 309 CE 65 1 Y 1 B LYS 309 ? NZ ? A LYS 309 NZ 66 1 Y 1 B LYS 310 ? CG ? A LYS 310 CG 67 1 Y 1 B LYS 310 ? CD ? A LYS 310 CD 68 1 Y 1 B LYS 310 ? CE ? A LYS 310 CE 69 1 Y 1 B LYS 310 ? NZ ? A LYS 310 NZ 70 1 Y 1 B VAL 315 ? CG1 ? A VAL 315 CG1 71 1 Y 1 B VAL 315 ? CG2 ? A VAL 315 CG2 72 1 Y 1 B LYS 318 ? CD ? A LYS 318 CD 73 1 Y 1 B LYS 318 ? CE ? A LYS 318 CE 74 1 Y 1 B LYS 318 ? NZ ? A LYS 318 NZ 75 1 Y 1 B ASN 319 ? CG ? A ASN 319 CG 76 1 Y 1 B ASN 319 ? OD1 ? A ASN 319 OD1 77 1 Y 1 B ASN 319 ? ND2 ? A ASN 319 ND2 78 1 Y 1 B VAL 332 ? CG1 ? A VAL 332 CG1 79 1 Y 1 B VAL 332 ? CG2 ? A VAL 332 CG2 80 1 Y 1 B GLN 334 ? CG ? A GLN 334 CG 81 1 Y 1 B GLN 334 ? CD ? A GLN 334 CD 82 1 Y 1 B GLN 334 ? OE1 ? A GLN 334 OE1 83 1 Y 1 B GLN 334 ? NE2 ? A GLN 334 NE2 84 1 Y 1 B ASP 335 ? CG ? A ASP 335 CG 85 1 Y 1 B ASP 335 ? OD1 ? A ASP 335 OD1 86 1 Y 1 B ASP 335 ? OD2 ? A ASP 335 OD2 87 1 Y 1 B LYS 338 ? CG ? A LYS 338 CG 88 1 Y 1 B LYS 338 ? CD ? A LYS 338 CD 89 1 Y 1 B LYS 338 ? CE ? A LYS 338 CE 90 1 Y 1 B LYS 338 ? NZ ? A LYS 338 NZ 91 1 Y 1 B GLN 370 ? CG ? A GLN 370 CG 92 1 Y 1 B GLN 370 ? CD ? A GLN 370 CD 93 1 Y 1 B GLN 370 ? OE1 ? A GLN 370 OE1 94 1 Y 1 B GLN 370 ? NE2 ? A GLN 370 NE2 95 1 Y 1 B ASP 385 ? CG ? A ASP 385 CG 96 1 Y 1 B ASP 385 ? OD1 ? A ASP 385 OD1 97 1 Y 1 B ASP 385 ? OD2 ? A ASP 385 OD2 98 1 Y 1 B PHE 391 ? CG ? A PHE 391 CG 99 1 Y 1 B PHE 391 ? CD1 ? A PHE 391 CD1 100 1 Y 1 B PHE 391 ? CD2 ? A PHE 391 CD2 101 1 Y 1 B PHE 391 ? CE1 ? A PHE 391 CE1 102 1 Y 1 B PHE 391 ? CE2 ? A PHE 391 CE2 103 1 Y 1 B PHE 391 ? CZ ? A PHE 391 CZ 104 1 Y 1 B ASN 396 ? CG ? A ASN 396 CG 105 1 Y 1 B ASN 396 ? OD1 ? A ASN 396 OD1 106 1 Y 1 B ASN 396 ? ND2 ? A ASN 396 ND2 107 1 Y 1 B VAL 397 ? CG1 ? A VAL 397 CG1 108 1 Y 1 B VAL 397 ? CG2 ? A VAL 397 CG2 109 1 Y 1 B LYS 398 ? CG ? A LYS 398 CG 110 1 Y 1 B LYS 398 ? CD ? A LYS 398 CD 111 1 Y 1 B LYS 398 ? CE ? A LYS 398 CE 112 1 Y 1 B LYS 398 ? NZ ? A LYS 398 NZ 113 1 Y 1 B PHE 401 ? CG ? A PHE 401 CG 114 1 Y 1 B PHE 401 ? CD1 ? A PHE 401 CD1 115 1 Y 1 B PHE 401 ? CD2 ? A PHE 401 CD2 116 1 Y 1 B PHE 401 ? CE1 ? A PHE 401 CE1 117 1 Y 1 B PHE 401 ? CE2 ? A PHE 401 CE2 118 1 Y 1 B PHE 401 ? CZ ? A PHE 401 CZ 119 1 Y 1 B HIS 402 ? CG ? A HIS 402 CG 120 1 Y 1 B HIS 402 ? ND1 ? A HIS 402 ND1 121 1 Y 1 B HIS 402 ? CD2 ? A HIS 402 CD2 122 1 Y 1 B HIS 402 ? CE1 ? A HIS 402 CE1 123 1 Y 1 B HIS 402 ? NE2 ? A HIS 402 NE2 124 1 Y 1 B LEU 403 ? CG ? A LEU 403 CG 125 1 Y 1 B LEU 403 ? CD1 ? A LEU 403 CD1 126 1 Y 1 B LEU 403 ? CD2 ? A LEU 403 CD2 127 1 Y 1 B LYS 414 ? CG ? A LYS 414 CG 128 1 Y 1 B LYS 414 ? CD ? A LYS 414 CD 129 1 Y 1 B LYS 414 ? CE ? A LYS 414 CE 130 1 Y 1 B LYS 414 ? NZ ? A LYS 414 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B MET 1 ? A MET 1 2 1 Y 1 B GLU 2 ? A GLU 2 3 1 Y 1 B LEU 3 ? A LEU 3 4 1 Y 1 B ALA 4 ? A ALA 4 5 1 Y 1 B ASP 5 ? A ASP 5 6 1 Y 1 B VAL 6 ? A VAL 6 7 1 Y 1 B GLY 7 ? A GLY 7 8 1 Y 1 B ALA 8 ? A ALA 8 9 1 Y 1 B ALA 9 ? A ALA 9 10 1 Y 1 B ALA 10 ? A ALA 10 11 1 Y 1 B SER 11 ? A SER 11 12 1 Y 1 B SER 12 ? A SER 12 13 1 Y 1 B GLN 13 ? A GLN 13 14 1 Y 1 B GLY 14 ? A GLY 14 15 1 Y 1 B VAL 15 ? A VAL 15 16 1 Y 1 B HIS 16 ? A HIS 16 17 1 Y 1 B ASP 17 ? A ASP 17 18 1 Y 1 B GLN 18 ? A GLN 18 19 1 Y 1 B VAL 19 ? A VAL 19 20 1 Y 1 B LEU 20 ? A LEU 20 21 1 Y 1 B PRO 21 ? A PRO 21 22 1 Y 1 B THR 22 ? A THR 22 23 1 Y 1 B PRO 23 ? A PRO 23 24 1 Y 1 B ASN 24 ? A ASN 24 25 1 Y 1 B ALA 25 ? A ALA 25 26 1 Y 1 B TYR 349 ? A TYR 349 27 1 Y 1 B SER 350 ? A SER 350 28 1 Y 1 B SER 351 ? A SER 351 29 1 Y 1 B GLU 352 ? A GLU 352 30 1 Y 1 B LYS 353 ? A LYS 353 31 1 Y 1 B HIS 354 ? A HIS 354 32 1 Y 1 B TYR 355 ? A TYR 355 33 1 Y 1 B LEU 372 ? A LEU 372 34 1 Y 1 B GLY 373 ? A GLY 373 35 1 Y 1 B THR 374 ? A THR 374 36 1 Y 1 B GLY 375 ? A GLY 375 37 1 Y 1 B ASN 376 ? A ASN 376 38 1 Y 1 B ALA 415 ? A ALA 415 39 1 Y 1 B LEU 416 ? A LEU 416 40 1 Y 1 B ASN 417 ? A ASN 417 41 1 Y 1 B THR 418 ? A THR 418 42 1 Y 1 B ALA 419 ? A ALA 419 43 1 Y 1 B LYS 420 ? A LYS 420 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DCP N1 N N N 158 DCP C2 C N N 159 DCP N3 N N N 160 DCP C4 C N N 161 DCP C5 C N N 162 DCP C6 C N N 163 DCP O2 O N N 164 DCP N4 N N N 165 DCP "C1'" C N R 166 DCP "C2'" C N N 167 DCP "C3'" C N S 168 DCP "C4'" C N R 169 DCP "O4'" O N N 170 DCP "O3'" O N N 171 DCP "C5'" C N N 172 DCP "O5'" O N N 173 DCP PA P N R 174 DCP O1A O N N 175 DCP O2A O N N 176 DCP O3A O N N 177 DCP PB P N S 178 DCP O1B O N N 179 DCP O2B O N N 180 DCP O3B O N N 181 DCP PG P N N 182 DCP O1G O N N 183 DCP O2G O N N 184 DCP O3G O N N 185 DCP H5 H N N 186 DCP H6 H N N 187 DCP HN41 H N N 188 DCP HN42 H N N 189 DCP "H1'" H N N 190 DCP "H2'1" H N N 191 DCP "H2'2" H N N 192 DCP "H3'" H N N 193 DCP "H4'" H N N 194 DCP "HO3'" H N N 195 DCP "H5'1" H N N 196 DCP "H5'2" H N N 197 DCP HOA2 H N N 198 DCP HOB2 H N N 199 DCP HOG2 H N N 200 DCP HOG3 H N N 201 DG OP3 O N N 202 DG P P N N 203 DG OP1 O N N 204 DG OP2 O N N 205 DG "O5'" O N N 206 DG "C5'" C N N 207 DG "C4'" C N R 208 DG "O4'" O N N 209 DG "C3'" C N S 210 DG "O3'" O N N 211 DG "C2'" C N N 212 DG "C1'" C N R 213 DG N9 N Y N 214 DG C8 C Y N 215 DG N7 N Y N 216 DG C5 C Y N 217 DG C6 C N N 218 DG O6 O N N 219 DG N1 N N N 220 DG C2 C N N 221 DG N2 N N N 222 DG N3 N N N 223 DG C4 C Y N 224 DG HOP3 H N N 225 DG HOP2 H N N 226 DG "H5'" H N N 227 DG "H5''" H N N 228 DG "H4'" H N N 229 DG "H3'" H N N 230 DG "HO3'" H N N 231 DG "H2'" H N N 232 DG "H2''" H N N 233 DG "H1'" H N N 234 DG H8 H N N 235 DG H1 H N N 236 DG H21 H N N 237 DG H22 H N N 238 DG8 P P N N 239 DG8 O1P O N N 240 DG8 O2P O N N 241 DG8 "O5'" O N N 242 DG8 "C5'" C N N 243 DG8 "C4'" C N R 244 DG8 "C3'" C N S 245 DG8 "C2'" C N N 246 DG8 "C1'" C N R 247 DG8 "O4'" O N N 248 DG8 N9 N Y N 249 DG8 C8 C Y N 250 DG8 N7 N Y N 251 DG8 C5 C Y N 252 DG8 C6 C N N 253 DG8 O6 O N N 254 DG8 N1 N N N 255 DG8 C2 C N N 256 DG8 N2 N N N 257 DG8 N3 N N N 258 DG8 C4 C Y N 259 DG8 N24 N N N 260 DG8 C25 C Y N 261 DG8 C30 C Y N 262 DG8 C35 C Y N 263 DG8 C34 C Y N 264 DG8 C38 C Y N 265 DG8 C37 C Y N 266 DG8 C36 C Y N 267 DG8 C28 C Y N 268 DG8 C27 C Y N 269 DG8 C26 C Y N 270 DG8 C39 C Y N 271 DG8 C40 C Y N 272 DG8 C41 C Y N 273 DG8 C33 C Y N 274 DG8 C32 C Y N 275 DG8 C31 C Y N 276 DG8 "O3'" O N N 277 DG8 H2 H N N 278 DG8 H3 H N N 279 DG8 H4 H N N 280 DG8 H5 H N N 281 DG8 H6 H N N 282 DG8 H7 H N N 283 DG8 H8 H N N 284 DG8 H9 H N N 285 DG8 H10 H N N 286 DG8 H11 H N N 287 DG8 H12 H N N 288 DG8 H13 H N N 289 DG8 H14 H N N 290 DG8 H15 H N N 291 DG8 H16 H N N 292 DG8 H17 H N N 293 DG8 H18 H N N 294 DG8 H19 H N N 295 DG8 H20 H N N 296 DG8 H21 H N N 297 DG8 H22 H N N 298 DG8 H23 H N N 299 DG8 O3P O N N 300 DG8 H25 H N N 301 DT OP3 O N N 302 DT P P N N 303 DT OP1 O N N 304 DT OP2 O N N 305 DT "O5'" O N N 306 DT "C5'" C N N 307 DT "C4'" C N R 308 DT "O4'" O N N 309 DT "C3'" C N S 310 DT "O3'" O N N 311 DT "C2'" C N N 312 DT "C1'" C N R 313 DT N1 N N N 314 DT C2 C N N 315 DT O2 O N N 316 DT N3 N N N 317 DT C4 C N N 318 DT O4 O N N 319 DT C5 C N N 320 DT C7 C N N 321 DT C6 C N N 322 DT HOP3 H N N 323 DT HOP2 H N N 324 DT "H5'" H N N 325 DT "H5''" H N N 326 DT "H4'" H N N 327 DT "H3'" H N N 328 DT "HO3'" H N N 329 DT "H2'" H N N 330 DT "H2''" H N N 331 DT "H1'" H N N 332 DT H3 H N N 333 DT H71 H N N 334 DT H72 H N N 335 DT H73 H N N 336 DT H6 H N N 337 GLN N N N N 338 GLN CA C N S 339 GLN C C N N 340 GLN O O N N 341 GLN CB C N N 342 GLN CG C N N 343 GLN CD C N N 344 GLN OE1 O N N 345 GLN NE2 N N N 346 GLN OXT O N N 347 GLN H H N N 348 GLN H2 H N N 349 GLN HA H N N 350 GLN HB2 H N N 351 GLN HB3 H N N 352 GLN HG2 H N N 353 GLN HG3 H N N 354 GLN HE21 H N N 355 GLN HE22 H N N 356 GLN HXT H N N 357 GLU N N N N 358 GLU CA C N S 359 GLU C C N N 360 GLU O O N N 361 GLU CB C N N 362 GLU CG C N N 363 GLU CD C N N 364 GLU OE1 O N N 365 GLU OE2 O N N 366 GLU OXT O N N 367 GLU H H N N 368 GLU H2 H N N 369 GLU HA H N N 370 GLU HB2 H N N 371 GLU HB3 H N N 372 GLU HG2 H N N 373 GLU HG3 H N N 374 GLU HE2 H N N 375 GLU HXT H N N 376 GLY N N N N 377 GLY CA C N N 378 GLY C C N N 379 GLY O O N N 380 GLY OXT O N N 381 GLY H H N N 382 GLY H2 H N N 383 GLY HA2 H N N 384 GLY HA3 H N N 385 GLY HXT H N N 386 HIS N N N N 387 HIS CA C N S 388 HIS C C N N 389 HIS O O N N 390 HIS CB C N N 391 HIS CG C Y N 392 HIS ND1 N Y N 393 HIS CD2 C Y N 394 HIS CE1 C Y N 395 HIS NE2 N Y N 396 HIS OXT O N N 397 HIS H H N N 398 HIS H2 H N N 399 HIS HA H N N 400 HIS HB2 H N N 401 HIS HB3 H N N 402 HIS HD1 H N N 403 HIS HD2 H N N 404 HIS HE1 H N N 405 HIS HE2 H N N 406 HIS HXT H N N 407 HOH O O N N 408 HOH H1 H N N 409 HOH H2 H N N 410 ILE N N N N 411 ILE CA C N S 412 ILE C C N N 413 ILE O O N N 414 ILE CB C N S 415 ILE CG1 C N N 416 ILE CG2 C N N 417 ILE CD1 C N N 418 ILE OXT O N N 419 ILE H H N N 420 ILE H2 H N N 421 ILE HA H N N 422 ILE HB H N N 423 ILE HG12 H N N 424 ILE HG13 H N N 425 ILE HG21 H N N 426 ILE HG22 H N N 427 ILE HG23 H N N 428 ILE HD11 H N N 429 ILE HD12 H N N 430 ILE HD13 H N N 431 ILE HXT H N N 432 LEU N N N N 433 LEU CA C N S 434 LEU C C N N 435 LEU O O N N 436 LEU CB C N N 437 LEU CG C N N 438 LEU CD1 C N N 439 LEU CD2 C N N 440 LEU OXT O N N 441 LEU H H N N 442 LEU H2 H N N 443 LEU HA H N N 444 LEU HB2 H N N 445 LEU HB3 H N N 446 LEU HG H N N 447 LEU HD11 H N N 448 LEU HD12 H N N 449 LEU HD13 H N N 450 LEU HD21 H N N 451 LEU HD22 H N N 452 LEU HD23 H N N 453 LEU HXT H N N 454 LYS N N N N 455 LYS CA C N S 456 LYS C C N N 457 LYS O O N N 458 LYS CB C N N 459 LYS CG C N N 460 LYS CD C N N 461 LYS CE C N N 462 LYS NZ N N N 463 LYS OXT O N N 464 LYS H H N N 465 LYS H2 H N N 466 LYS HA H N N 467 LYS HB2 H N N 468 LYS HB3 H N N 469 LYS HG2 H N N 470 LYS HG3 H N N 471 LYS HD2 H N N 472 LYS HD3 H N N 473 LYS HE2 H N N 474 LYS HE3 H N N 475 LYS HZ1 H N N 476 LYS HZ2 H N N 477 LYS HZ3 H N N 478 LYS HXT H N N 479 MET N N N N 480 MET CA C N S 481 MET C C N N 482 MET O O N N 483 MET CB C N N 484 MET CG C N N 485 MET SD S N N 486 MET CE C N N 487 MET OXT O N N 488 MET H H N N 489 MET H2 H N N 490 MET HA H N N 491 MET HB2 H N N 492 MET HB3 H N N 493 MET HG2 H N N 494 MET HG3 H N N 495 MET HE1 H N N 496 MET HE2 H N N 497 MET HE3 H N N 498 MET HXT H N N 499 MG MG MG N N 500 PHE N N N N 501 PHE CA C N S 502 PHE C C N N 503 PHE O O N N 504 PHE CB C N N 505 PHE CG C Y N 506 PHE CD1 C Y N 507 PHE CD2 C Y N 508 PHE CE1 C Y N 509 PHE CE2 C Y N 510 PHE CZ C Y N 511 PHE OXT O N N 512 PHE H H N N 513 PHE H2 H N N 514 PHE HA H N N 515 PHE HB2 H N N 516 PHE HB3 H N N 517 PHE HD1 H N N 518 PHE HD2 H N N 519 PHE HE1 H N N 520 PHE HE2 H N N 521 PHE HZ H N N 522 PHE HXT H N N 523 PRO N N N N 524 PRO CA C N S 525 PRO C C N N 526 PRO O O N N 527 PRO CB C N N 528 PRO CG C N N 529 PRO CD C N N 530 PRO OXT O N N 531 PRO H H N N 532 PRO HA H N N 533 PRO HB2 H N N 534 PRO HB3 H N N 535 PRO HG2 H N N 536 PRO HG3 H N N 537 PRO HD2 H N N 538 PRO HD3 H N N 539 PRO HXT H N N 540 SER N N N N 541 SER CA C N S 542 SER C C N N 543 SER O O N N 544 SER CB C N N 545 SER OG O N N 546 SER OXT O N N 547 SER H H N N 548 SER H2 H N N 549 SER HA H N N 550 SER HB2 H N N 551 SER HB3 H N N 552 SER HG H N N 553 SER HXT H N N 554 THR N N N N 555 THR CA C N S 556 THR C C N N 557 THR O O N N 558 THR CB C N R 559 THR OG1 O N N 560 THR CG2 C N N 561 THR OXT O N N 562 THR H H N N 563 THR H2 H N N 564 THR HA H N N 565 THR HB H N N 566 THR HG1 H N N 567 THR HG21 H N N 568 THR HG22 H N N 569 THR HG23 H N N 570 THR HXT H N N 571 TYR N N N N 572 TYR CA C N S 573 TYR C C N N 574 TYR O O N N 575 TYR CB C N N 576 TYR CG C Y N 577 TYR CD1 C Y N 578 TYR CD2 C Y N 579 TYR CE1 C Y N 580 TYR CE2 C Y N 581 TYR CZ C Y N 582 TYR OH O N N 583 TYR OXT O N N 584 TYR H H N N 585 TYR H2 H N N 586 TYR HA H N N 587 TYR HB2 H N N 588 TYR HB3 H N N 589 TYR HD1 H N N 590 TYR HD2 H N N 591 TYR HE1 H N N 592 TYR HE2 H N N 593 TYR HH H N N 594 TYR HXT H N N 595 VAL N N N N 596 VAL CA C N S 597 VAL C C N N 598 VAL O O N N 599 VAL CB C N N 600 VAL CG1 C N N 601 VAL CG2 C N N 602 VAL OXT O N N 603 VAL H H N N 604 VAL H2 H N N 605 VAL HA H N N 606 VAL HB H N N 607 VAL HG11 H N N 608 VAL HG12 H N N 609 VAL HG13 H N N 610 VAL HG21 H N N 611 VAL HG22 H N N 612 VAL HG23 H N N 613 VAL HXT H N N 614 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DCP N1 C2 sing N N 156 DCP N1 C6 sing N N 157 DCP N1 "C1'" sing N N 158 DCP C2 N3 sing N N 159 DCP C2 O2 doub N N 160 DCP N3 C4 doub N N 161 DCP C4 C5 sing N N 162 DCP C4 N4 sing N N 163 DCP C5 C6 doub N N 164 DCP C5 H5 sing N N 165 DCP C6 H6 sing N N 166 DCP N4 HN41 sing N N 167 DCP N4 HN42 sing N N 168 DCP "C1'" "C2'" sing N N 169 DCP "C1'" "O4'" sing N N 170 DCP "C1'" "H1'" sing N N 171 DCP "C2'" "C3'" sing N N 172 DCP "C2'" "H2'1" sing N N 173 DCP "C2'" "H2'2" sing N N 174 DCP "C3'" "C4'" sing N N 175 DCP "C3'" "O3'" sing N N 176 DCP "C3'" "H3'" sing N N 177 DCP "C4'" "O4'" sing N N 178 DCP "C4'" "C5'" sing N N 179 DCP "C4'" "H4'" sing N N 180 DCP "O3'" "HO3'" sing N N 181 DCP "C5'" "O5'" sing N N 182 DCP "C5'" "H5'1" sing N N 183 DCP "C5'" "H5'2" sing N N 184 DCP "O5'" PA sing N N 185 DCP PA O1A doub N N 186 DCP PA O2A sing N N 187 DCP PA O3A sing N N 188 DCP O2A HOA2 sing N N 189 DCP O3A PB sing N N 190 DCP PB O1B doub N N 191 DCP PB O2B sing N N 192 DCP PB O3B sing N N 193 DCP O2B HOB2 sing N N 194 DCP O3B PG sing N N 195 DCP PG O1G doub N N 196 DCP PG O2G sing N N 197 DCP PG O3G sing N N 198 DCP O2G HOG2 sing N N 199 DCP O3G HOG3 sing N N 200 DG OP3 P sing N N 201 DG OP3 HOP3 sing N N 202 DG P OP1 doub N N 203 DG P OP2 sing N N 204 DG P "O5'" sing N N 205 DG OP2 HOP2 sing N N 206 DG "O5'" "C5'" sing N N 207 DG "C5'" "C4'" sing N N 208 DG "C5'" "H5'" sing N N 209 DG "C5'" "H5''" sing N N 210 DG "C4'" "O4'" sing N N 211 DG "C4'" "C3'" sing N N 212 DG "C4'" "H4'" sing N N 213 DG "O4'" "C1'" sing N N 214 DG "C3'" "O3'" sing N N 215 DG "C3'" "C2'" sing N N 216 DG "C3'" "H3'" sing N N 217 DG "O3'" "HO3'" sing N N 218 DG "C2'" "C1'" sing N N 219 DG "C2'" "H2'" sing N N 220 DG "C2'" "H2''" sing N N 221 DG "C1'" N9 sing N N 222 DG "C1'" "H1'" sing N N 223 DG N9 C8 sing Y N 224 DG N9 C4 sing Y N 225 DG C8 N7 doub Y N 226 DG C8 H8 sing N N 227 DG N7 C5 sing Y N 228 DG C5 C6 sing N N 229 DG C5 C4 doub Y N 230 DG C6 O6 doub N N 231 DG C6 N1 sing N N 232 DG N1 C2 sing N N 233 DG N1 H1 sing N N 234 DG C2 N2 sing N N 235 DG C2 N3 doub N N 236 DG N2 H21 sing N N 237 DG N2 H22 sing N N 238 DG N3 C4 sing N N 239 DG8 "O3'" "C3'" sing N N 240 DG8 O1P P doub N N 241 DG8 "C3'" "C4'" sing N N 242 DG8 "C3'" "C2'" sing N N 243 DG8 P O2P sing N N 244 DG8 P "O5'" sing N N 245 DG8 "C4'" "C5'" sing N N 246 DG8 "C4'" "O4'" sing N N 247 DG8 "C5'" "O5'" sing N N 248 DG8 "C2'" "C1'" sing N N 249 DG8 "O4'" "C1'" sing N N 250 DG8 "C1'" N9 sing N N 251 DG8 C32 C31 doub Y N 252 DG8 C32 C33 sing Y N 253 DG8 N9 C4 sing Y N 254 DG8 N9 C8 sing Y N 255 DG8 N3 C4 sing N N 256 DG8 N3 C2 doub N N 257 DG8 N2 C2 sing N N 258 DG8 C31 C30 sing Y N 259 DG8 C4 C5 doub Y N 260 DG8 C41 C33 doub Y N 261 DG8 C41 C40 sing Y N 262 DG8 C2 N1 sing N N 263 DG8 N24 C8 sing N N 264 DG8 N24 C25 sing N N 265 DG8 C33 C34 sing Y N 266 DG8 C8 N7 doub Y N 267 DG8 C40 C39 doub Y N 268 DG8 C30 C25 doub Y N 269 DG8 C30 C35 sing Y N 270 DG8 C25 C26 sing Y N 271 DG8 C5 N7 sing Y N 272 DG8 C5 C6 sing N N 273 DG8 N1 C6 sing N N 274 DG8 C34 C35 doub Y N 275 DG8 C34 C38 sing Y N 276 DG8 C35 C28 sing Y N 277 DG8 C6 O6 doub N N 278 DG8 C39 C38 sing Y N 279 DG8 C26 C27 doub Y N 280 DG8 C38 C37 doub Y N 281 DG8 C28 C27 sing Y N 282 DG8 C28 C36 doub Y N 283 DG8 C37 C36 sing Y N 284 DG8 O2P H2 sing N N 285 DG8 "C5'" H3 sing N N 286 DG8 "C5'" H4 sing N N 287 DG8 "C4'" H5 sing N N 288 DG8 "C3'" H6 sing N N 289 DG8 "C2'" H7 sing N N 290 DG8 "C2'" H8 sing N N 291 DG8 "C1'" H9 sing N N 292 DG8 N1 H10 sing N N 293 DG8 N2 H11 sing N N 294 DG8 N2 H12 sing N N 295 DG8 N24 H13 sing N N 296 DG8 C37 H14 sing N N 297 DG8 C36 H15 sing N N 298 DG8 C27 H16 sing N N 299 DG8 C26 H17 sing N N 300 DG8 C39 H18 sing N N 301 DG8 C40 H19 sing N N 302 DG8 C41 H20 sing N N 303 DG8 C32 H21 sing N N 304 DG8 C31 H22 sing N N 305 DG8 "O3'" H23 sing N N 306 DG8 P O3P sing N N 307 DG8 O3P H25 sing N N 308 DT OP3 P sing N N 309 DT OP3 HOP3 sing N N 310 DT P OP1 doub N N 311 DT P OP2 sing N N 312 DT P "O5'" sing N N 313 DT OP2 HOP2 sing N N 314 DT "O5'" "C5'" sing N N 315 DT "C5'" "C4'" sing N N 316 DT "C5'" "H5'" sing N N 317 DT "C5'" "H5''" sing N N 318 DT "C4'" "O4'" sing N N 319 DT "C4'" "C3'" sing N N 320 DT "C4'" "H4'" sing N N 321 DT "O4'" "C1'" sing N N 322 DT "C3'" "O3'" sing N N 323 DT "C3'" "C2'" sing N N 324 DT "C3'" "H3'" sing N N 325 DT "O3'" "HO3'" sing N N 326 DT "C2'" "C1'" sing N N 327 DT "C2'" "H2'" sing N N 328 DT "C2'" "H2''" sing N N 329 DT "C1'" N1 sing N N 330 DT "C1'" "H1'" sing N N 331 DT N1 C2 sing N N 332 DT N1 C6 sing N N 333 DT C2 O2 doub N N 334 DT C2 N3 sing N N 335 DT N3 C4 sing N N 336 DT N3 H3 sing N N 337 DT C4 O4 doub N N 338 DT C4 C5 sing N N 339 DT C5 C7 sing N N 340 DT C5 C6 doub N N 341 DT C7 H71 sing N N 342 DT C7 H72 sing N N 343 DT C7 H73 sing N N 344 DT C6 H6 sing N N 345 GLN N CA sing N N 346 GLN N H sing N N 347 GLN N H2 sing N N 348 GLN CA C sing N N 349 GLN CA CB sing N N 350 GLN CA HA sing N N 351 GLN C O doub N N 352 GLN C OXT sing N N 353 GLN CB CG sing N N 354 GLN CB HB2 sing N N 355 GLN CB HB3 sing N N 356 GLN CG CD sing N N 357 GLN CG HG2 sing N N 358 GLN CG HG3 sing N N 359 GLN CD OE1 doub N N 360 GLN CD NE2 sing N N 361 GLN NE2 HE21 sing N N 362 GLN NE2 HE22 sing N N 363 GLN OXT HXT sing N N 364 GLU N CA sing N N 365 GLU N H sing N N 366 GLU N H2 sing N N 367 GLU CA C sing N N 368 GLU CA CB sing N N 369 GLU CA HA sing N N 370 GLU C O doub N N 371 GLU C OXT sing N N 372 GLU CB CG sing N N 373 GLU CB HB2 sing N N 374 GLU CB HB3 sing N N 375 GLU CG CD sing N N 376 GLU CG HG2 sing N N 377 GLU CG HG3 sing N N 378 GLU CD OE1 doub N N 379 GLU CD OE2 sing N N 380 GLU OE2 HE2 sing N N 381 GLU OXT HXT sing N N 382 GLY N CA sing N N 383 GLY N H sing N N 384 GLY N H2 sing N N 385 GLY CA C sing N N 386 GLY CA HA2 sing N N 387 GLY CA HA3 sing N N 388 GLY C O doub N N 389 GLY C OXT sing N N 390 GLY OXT HXT sing N N 391 HIS N CA sing N N 392 HIS N H sing N N 393 HIS N H2 sing N N 394 HIS CA C sing N N 395 HIS CA CB sing N N 396 HIS CA HA sing N N 397 HIS C O doub N N 398 HIS C OXT sing N N 399 HIS CB CG sing N N 400 HIS CB HB2 sing N N 401 HIS CB HB3 sing N N 402 HIS CG ND1 sing Y N 403 HIS CG CD2 doub Y N 404 HIS ND1 CE1 doub Y N 405 HIS ND1 HD1 sing N N 406 HIS CD2 NE2 sing Y N 407 HIS CD2 HD2 sing N N 408 HIS CE1 NE2 sing Y N 409 HIS CE1 HE1 sing N N 410 HIS NE2 HE2 sing N N 411 HIS OXT HXT sing N N 412 HOH O H1 sing N N 413 HOH O H2 sing N N 414 ILE N CA sing N N 415 ILE N H sing N N 416 ILE N H2 sing N N 417 ILE CA C sing N N 418 ILE CA CB sing N N 419 ILE CA HA sing N N 420 ILE C O doub N N 421 ILE C OXT sing N N 422 ILE CB CG1 sing N N 423 ILE CB CG2 sing N N 424 ILE CB HB sing N N 425 ILE CG1 CD1 sing N N 426 ILE CG1 HG12 sing N N 427 ILE CG1 HG13 sing N N 428 ILE CG2 HG21 sing N N 429 ILE CG2 HG22 sing N N 430 ILE CG2 HG23 sing N N 431 ILE CD1 HD11 sing N N 432 ILE CD1 HD12 sing N N 433 ILE CD1 HD13 sing N N 434 ILE OXT HXT sing N N 435 LEU N CA sing N N 436 LEU N H sing N N 437 LEU N H2 sing N N 438 LEU CA C sing N N 439 LEU CA CB sing N N 440 LEU CA HA sing N N 441 LEU C O doub N N 442 LEU C OXT sing N N 443 LEU CB CG sing N N 444 LEU CB HB2 sing N N 445 LEU CB HB3 sing N N 446 LEU CG CD1 sing N N 447 LEU CG CD2 sing N N 448 LEU CG HG sing N N 449 LEU CD1 HD11 sing N N 450 LEU CD1 HD12 sing N N 451 LEU CD1 HD13 sing N N 452 LEU CD2 HD21 sing N N 453 LEU CD2 HD22 sing N N 454 LEU CD2 HD23 sing N N 455 LEU OXT HXT sing N N 456 LYS N CA sing N N 457 LYS N H sing N N 458 LYS N H2 sing N N 459 LYS CA C sing N N 460 LYS CA CB sing N N 461 LYS CA HA sing N N 462 LYS C O doub N N 463 LYS C OXT sing N N 464 LYS CB CG sing N N 465 LYS CB HB2 sing N N 466 LYS CB HB3 sing N N 467 LYS CG CD sing N N 468 LYS CG HG2 sing N N 469 LYS CG HG3 sing N N 470 LYS CD CE sing N N 471 LYS CD HD2 sing N N 472 LYS CD HD3 sing N N 473 LYS CE NZ sing N N 474 LYS CE HE2 sing N N 475 LYS CE HE3 sing N N 476 LYS NZ HZ1 sing N N 477 LYS NZ HZ2 sing N N 478 LYS NZ HZ3 sing N N 479 LYS OXT HXT sing N N 480 MET N CA sing N N 481 MET N H sing N N 482 MET N H2 sing N N 483 MET CA C sing N N 484 MET CA CB sing N N 485 MET CA HA sing N N 486 MET C O doub N N 487 MET C OXT sing N N 488 MET CB CG sing N N 489 MET CB HB2 sing N N 490 MET CB HB3 sing N N 491 MET CG SD sing N N 492 MET CG HG2 sing N N 493 MET CG HG3 sing N N 494 MET SD CE sing N N 495 MET CE HE1 sing N N 496 MET CE HE2 sing N N 497 MET CE HE3 sing N N 498 MET OXT HXT sing N N 499 PHE N CA sing N N 500 PHE N H sing N N 501 PHE N H2 sing N N 502 PHE CA C sing N N 503 PHE CA CB sing N N 504 PHE CA HA sing N N 505 PHE C O doub N N 506 PHE C OXT sing N N 507 PHE CB CG sing N N 508 PHE CB HB2 sing N N 509 PHE CB HB3 sing N N 510 PHE CG CD1 doub Y N 511 PHE CG CD2 sing Y N 512 PHE CD1 CE1 sing Y N 513 PHE CD1 HD1 sing N N 514 PHE CD2 CE2 doub Y N 515 PHE CD2 HD2 sing N N 516 PHE CE1 CZ doub Y N 517 PHE CE1 HE1 sing N N 518 PHE CE2 CZ sing Y N 519 PHE CE2 HE2 sing N N 520 PHE CZ HZ sing N N 521 PHE OXT HXT sing N N 522 PRO N CA sing N N 523 PRO N CD sing N N 524 PRO N H sing N N 525 PRO CA C sing N N 526 PRO CA CB sing N N 527 PRO CA HA sing N N 528 PRO C O doub N N 529 PRO C OXT sing N N 530 PRO CB CG sing N N 531 PRO CB HB2 sing N N 532 PRO CB HB3 sing N N 533 PRO CG CD sing N N 534 PRO CG HG2 sing N N 535 PRO CG HG3 sing N N 536 PRO CD HD2 sing N N 537 PRO CD HD3 sing N N 538 PRO OXT HXT sing N N 539 SER N CA sing N N 540 SER N H sing N N 541 SER N H2 sing N N 542 SER CA C sing N N 543 SER CA CB sing N N 544 SER CA HA sing N N 545 SER C O doub N N 546 SER C OXT sing N N 547 SER CB OG sing N N 548 SER CB HB2 sing N N 549 SER CB HB3 sing N N 550 SER OG HG sing N N 551 SER OXT HXT sing N N 552 THR N CA sing N N 553 THR N H sing N N 554 THR N H2 sing N N 555 THR CA C sing N N 556 THR CA CB sing N N 557 THR CA HA sing N N 558 THR C O doub N N 559 THR C OXT sing N N 560 THR CB OG1 sing N N 561 THR CB CG2 sing N N 562 THR CB HB sing N N 563 THR OG1 HG1 sing N N 564 THR CG2 HG21 sing N N 565 THR CG2 HG22 sing N N 566 THR CG2 HG23 sing N N 567 THR OXT HXT sing N N 568 TYR N CA sing N N 569 TYR N H sing N N 570 TYR N H2 sing N N 571 TYR CA C sing N N 572 TYR CA CB sing N N 573 TYR CA HA sing N N 574 TYR C O doub N N 575 TYR C OXT sing N N 576 TYR CB CG sing N N 577 TYR CB HB2 sing N N 578 TYR CB HB3 sing N N 579 TYR CG CD1 doub Y N 580 TYR CG CD2 sing Y N 581 TYR CD1 CE1 sing Y N 582 TYR CD1 HD1 sing N N 583 TYR CD2 CE2 doub Y N 584 TYR CD2 HD2 sing N N 585 TYR CE1 CZ doub Y N 586 TYR CE1 HE1 sing N N 587 TYR CE2 CZ sing Y N 588 TYR CE2 HE2 sing N N 589 TYR CZ OH sing N N 590 TYR OH HH sing N N 591 TYR OXT HXT sing N N 592 VAL N CA sing N N 593 VAL N H sing N N 594 VAL N H2 sing N N 595 VAL CA C sing N N 596 VAL CA CB sing N N 597 VAL CA HA sing N N 598 VAL C O doub N N 599 VAL C OXT sing N N 600 VAL CB CG1 sing N N 601 VAL CB CG2 sing N N 602 VAL CB HB sing N N 603 VAL CG1 HG11 sing N N 604 VAL CG1 HG12 sing N N 605 VAL CG1 HG13 sing N N 606 VAL CG2 HG21 sing N N 607 VAL CG2 HG22 sing N N 608 VAL CG2 HG23 sing N N 609 VAL OXT HXT sing N N 610 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4EYH 'double helix' 4EYH 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DG 2 1_555 C DC 7 1_555 0.396 -0.239 -0.208 -8.415 -10.350 4.225 1 T_DG841:DC873_P T 841 ? P 873 ? 19 1 1 B DG 3 1_555 C DC 6 1_555 0.616 -0.154 0.535 -3.326 -6.232 2.428 2 T_DG842:DC872_P T 842 ? P 872 ? 19 1 1 B DG 4 1_555 C DC 5 1_555 0.291 -0.150 -0.300 -11.405 -6.807 1.322 3 T_DG843:DC871_P T 843 ? P 871 ? 19 1 1 B DT 5 1_555 C DA 4 1_555 -0.447 -0.208 0.411 -8.729 -6.381 -4.049 4 T_DT844:DA870_P T 844 ? P 870 ? 20 1 1 B DC 6 1_555 C DG 3 1_555 0.968 -0.313 0.008 -2.843 -2.005 2.844 5 T_DC845:DG869_P T 845 ? P 869 ? 19 1 1 B DC 7 1_555 C DG 2 1_555 0.424 -0.086 0.184 -8.274 -10.560 -2.332 6 T_DC846:DG868_P T 846 ? P 868 ? 19 1 1 B DT 8 1_555 C DA 1 1_555 -0.367 -0.383 0.118 -5.302 -9.880 -5.069 7 T_DT847:DA867_P T 847 ? P 867 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DG 2 1_555 C DC 7 1_555 B DG 3 1_555 C DC 6 1_555 -0.419 -1.203 3.214 -4.348 13.060 33.539 -3.643 0.107 2.614 21.539 7.171 36.178 1 TT_DG841DG842:DC872DC873_PP T 841 ? P 873 ? T 842 ? P 872 ? 1 B DG 3 1_555 C DC 6 1_555 B DG 4 1_555 C DC 5 1_555 0.042 -1.330 3.519 4.695 6.452 26.403 -4.417 1.094 3.075 13.732 -9.992 27.562 2 TT_DG842DG843:DC871DC872_PP T 842 ? P 872 ? T 843 ? P 871 ? 1 B DG 4 1_555 C DC 5 1_555 B DT 5 1_555 C DA 4 1_555 -0.801 -1.298 3.289 -6.531 -3.482 32.151 -1.664 0.244 3.497 -6.185 11.601 32.970 3 TT_DG843DT844:DA870DC871_PP T 843 ? P 871 ? T 844 ? P 870 ? 1 B DT 5 1_555 C DA 4 1_555 B DC 6 1_555 C DG 3 1_555 0.214 -0.761 3.155 3.516 0.122 38.086 -1.177 0.101 3.159 0.186 -5.374 38.242 4 TT_DT844DC845:DG869DA870_PP T 844 ? P 870 ? T 845 ? P 869 ? 1 B DC 6 1_555 C DG 3 1_555 B DC 7 1_555 C DG 2 1_555 -0.837 -0.625 3.460 -0.492 3.593 34.624 -1.619 1.321 3.391 6.017 0.823 34.807 5 TT_DC845DC846:DG868DG869_PP T 845 ? P 869 ? T 846 ? P 868 ? 1 B DC 7 1_555 C DG 2 1_555 B DT 8 1_555 C DA 1 1_555 -0.176 -1.193 3.349 -0.361 -0.344 22.376 -2.942 0.314 3.369 -0.886 0.929 22.381 6 TT_DC846DT847:DA867DG868_PP T 846 ? P 868 ? T 847 ? P 867 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 "2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE" DCP 5 'MAGNESIUM ION' MG 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3GV5 _pdbx_initial_refinement_model.details 'PDB ENTRY 3GV5' #