data_4FMK # _entry.id 4FMK # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4FMK pdb_00004fmk 10.2210/pdb4fmk/pdb RCSB RCSB073086 ? ? WWPDB D_1000073086 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4FMF 'Crystal structure of nectin-1' unspecified PDB 4FN0 'Crystal structure of nectin-2, 2nd crystal form' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4FMK _pdbx_database_status.recvd_initial_deposition_date 2012-06-17 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Harrison, O.J.' 1 'Brasch, J.' 2 'Shapiro, L.' 3 # _citation.id primary _citation.title 'Nectin ectodomain structures reveal a canonical adhesive interface.' _citation.journal_abbrev Nat.Struct.Mol.Biol. _citation.journal_volume 19 _citation.page_first 906 _citation.page_last 915 _citation.year 2012 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1545-9993 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22902367 _citation.pdbx_database_id_DOI 10.1038/nsmb.2366 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Harrison, O.J.' 1 ? primary 'Vendome, J.' 2 ? primary 'Brasch, J.' 3 ? primary 'Jin, X.' 4 ? primary 'Hong, S.' 5 ? primary 'Katsamba, P.S.' 6 ? primary 'Ahlsen, G.' 7 ? primary 'Troyanovsky, R.B.' 8 ? primary 'Troyanovsky, S.M.' 9 ? primary 'Honig, B.' 10 ? primary 'Shapiro, L.' 11 ? # _cell.entry_id 4FMK _cell.length_a 68.666 _cell.length_b 68.666 _cell.length_c 159.605 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4FMK _symmetry.space_group_name_H-M 'P 31 1 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 151 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Poliovirus receptor-related protein 2' 24920.076 1 ? ? 'extracellular domain (D1-D2, UNP residues 32-250)' ? 2 branched man ;alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose ; 1056.964 1 ? ? ? ? 3 branched man ;alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose ; 894.823 1 ? ? ? ? 4 non-polymer syn 'CADMIUM ION' 112.411 4 ? ? ? ? 5 water nat water 18.015 36 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;Nectin-2, Herpes virus entry mediator B, Herpesvirus entry mediator B, HveB, Murine herpes virus entry protein B, mHveB, Poliovirus receptor homolog ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;QDVRVRVLPEVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADL RDATLAFRGLRVEDEGNYTCEFATFPNGTRRGVTWLRVIAQPENHAEAQEVTIGPQSVAVARCVSTGGRPPARITWISSL GGEAKDTQEPGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEPILLPVTLSVRYHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;QDVRVRVLPEVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADL RDATLAFRGLRVEDEGNYTCEFATFPNGTRRGVTWLRVIAQPENHAEAQEVTIGPQSVAVARCVSTGGRPPARITWISSL GGEAKDTQEPGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEPILLPVTLSVRYHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLN n 1 2 ASP n 1 3 VAL n 1 4 ARG n 1 5 VAL n 1 6 ARG n 1 7 VAL n 1 8 LEU n 1 9 PRO n 1 10 GLU n 1 11 VAL n 1 12 ARG n 1 13 GLY n 1 14 ARG n 1 15 LEU n 1 16 GLY n 1 17 GLY n 1 18 THR n 1 19 VAL n 1 20 GLU n 1 21 LEU n 1 22 PRO n 1 23 CYS n 1 24 HIS n 1 25 LEU n 1 26 LEU n 1 27 PRO n 1 28 PRO n 1 29 THR n 1 30 THR n 1 31 GLU n 1 32 ARG n 1 33 VAL n 1 34 SER n 1 35 GLN n 1 36 VAL n 1 37 THR n 1 38 TRP n 1 39 GLN n 1 40 ARG n 1 41 LEU n 1 42 ASP n 1 43 GLY n 1 44 THR n 1 45 VAL n 1 46 VAL n 1 47 ALA n 1 48 ALA n 1 49 PHE n 1 50 HIS n 1 51 PRO n 1 52 SER n 1 53 PHE n 1 54 GLY n 1 55 VAL n 1 56 ASP n 1 57 PHE n 1 58 PRO n 1 59 ASN n 1 60 SER n 1 61 GLN n 1 62 PHE n 1 63 SER n 1 64 LYS n 1 65 ASP n 1 66 ARG n 1 67 LEU n 1 68 SER n 1 69 PHE n 1 70 VAL n 1 71 ARG n 1 72 ALA n 1 73 ARG n 1 74 PRO n 1 75 GLU n 1 76 THR n 1 77 ASN n 1 78 ALA n 1 79 ASP n 1 80 LEU n 1 81 ARG n 1 82 ASP n 1 83 ALA n 1 84 THR n 1 85 LEU n 1 86 ALA n 1 87 PHE n 1 88 ARG n 1 89 GLY n 1 90 LEU n 1 91 ARG n 1 92 VAL n 1 93 GLU n 1 94 ASP n 1 95 GLU n 1 96 GLY n 1 97 ASN n 1 98 TYR n 1 99 THR n 1 100 CYS n 1 101 GLU n 1 102 PHE n 1 103 ALA n 1 104 THR n 1 105 PHE n 1 106 PRO n 1 107 ASN n 1 108 GLY n 1 109 THR n 1 110 ARG n 1 111 ARG n 1 112 GLY n 1 113 VAL n 1 114 THR n 1 115 TRP n 1 116 LEU n 1 117 ARG n 1 118 VAL n 1 119 ILE n 1 120 ALA n 1 121 GLN n 1 122 PRO n 1 123 GLU n 1 124 ASN n 1 125 HIS n 1 126 ALA n 1 127 GLU n 1 128 ALA n 1 129 GLN n 1 130 GLU n 1 131 VAL n 1 132 THR n 1 133 ILE n 1 134 GLY n 1 135 PRO n 1 136 GLN n 1 137 SER n 1 138 VAL n 1 139 ALA n 1 140 VAL n 1 141 ALA n 1 142 ARG n 1 143 CYS n 1 144 VAL n 1 145 SER n 1 146 THR n 1 147 GLY n 1 148 GLY n 1 149 ARG n 1 150 PRO n 1 151 PRO n 1 152 ALA n 1 153 ARG n 1 154 ILE n 1 155 THR n 1 156 TRP n 1 157 ILE n 1 158 SER n 1 159 SER n 1 160 LEU n 1 161 GLY n 1 162 GLY n 1 163 GLU n 1 164 ALA n 1 165 LYS n 1 166 ASP n 1 167 THR n 1 168 GLN n 1 169 GLU n 1 170 PRO n 1 171 GLY n 1 172 ILE n 1 173 GLN n 1 174 ALA n 1 175 GLY n 1 176 THR n 1 177 VAL n 1 178 THR n 1 179 ILE n 1 180 ILE n 1 181 SER n 1 182 ARG n 1 183 TYR n 1 184 SER n 1 185 LEU n 1 186 VAL n 1 187 PRO n 1 188 VAL n 1 189 GLY n 1 190 ARG n 1 191 ALA n 1 192 ASP n 1 193 GLY n 1 194 VAL n 1 195 LYS n 1 196 VAL n 1 197 THR n 1 198 CYS n 1 199 ARG n 1 200 VAL n 1 201 GLU n 1 202 HIS n 1 203 GLU n 1 204 SER n 1 205 PHE n 1 206 GLU n 1 207 GLU n 1 208 PRO n 1 209 ILE n 1 210 LEU n 1 211 LEU n 1 212 PRO n 1 213 VAL n 1 214 THR n 1 215 LEU n 1 216 SER n 1 217 VAL n 1 218 ARG n 1 219 TYR n 1 220 HIS n 1 221 HIS n 1 222 HIS n 1 223 HIS n 1 224 HIS n 1 225 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name mouse _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'Pvrl2, Mph, Pvr, Pvs' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name human _entity_src_gen.pdbx_host_org_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 9606 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line 'HEK 293F' _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pCEP4 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PVRL2_MOUSE _struct_ref.pdbx_db_accession P32507 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;QDVRVRVLPEVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADL RDATLAFRGLRVEDEGNYTCEFATFPNGTRRGVTWLRVIAQPENHAEAQEVTIGPQSVAVARCVSTGGRPPARITWISSL GGEAKDTQEPGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEPILLPVTLSVRY ; _struct_ref.pdbx_align_begin 32 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4FMK _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 219 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P32507 _struct_ref_seq.db_align_beg 32 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 250 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 32 _struct_ref_seq.pdbx_auth_seq_align_end 250 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4FMK HIS A 220 ? UNP P32507 ? ? 'expression tag' 251 1 1 4FMK HIS A 221 ? UNP P32507 ? ? 'expression tag' 252 2 1 4FMK HIS A 222 ? UNP P32507 ? ? 'expression tag' 253 3 1 4FMK HIS A 223 ? UNP P32507 ? ? 'expression tag' 254 4 1 4FMK HIS A 224 ? UNP P32507 ? ? 'expression tag' 255 5 1 4FMK HIS A 225 ? UNP P32507 ? ? 'expression tag' 256 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BMA 'D-saccharide, beta linking' . beta-D-mannopyranose 'beta-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 CD non-polymer . 'CADMIUM ION' ? 'Cd 2' 112.411 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FUC 'L-saccharide, alpha linking' . alpha-L-fucopyranose 'alpha-L-fucose; 6-deoxy-alpha-L-galactopyranose; L-fucose; fucose' 'C6 H12 O5' 164.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MAN 'D-saccharide, alpha linking' . alpha-D-mannopyranose 'alpha-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4FMK _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 4.36 _exptl_crystal.density_percent_sol 71.78 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293.15 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.pdbx_details ;6% w/v PEG6000, 0.05 M cadmium sulfate, 0.2 M sodium acetate, 0.1 M MES, pH 6.0, cryoprotectant: 15% 2R,3R-butane-di-ol, VAPOR DIFFUSION, HANGING DROP, temperature 293.15K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MAR CCD 165 mm' _diffrn_detector.pdbx_collection_date 2011-07-06 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Bent single Si(111) crystal (horizontal focusing and deflection)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9792 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X4C' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X4C _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9792 # _reflns.entry_id 4FMK _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 40.0 _reflns.d_resolution_high 2.54 _reflns.number_obs 14118 _reflns.number_all 14118 _reflns.percent_possible_obs 99.4 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.06 _reflns.pdbx_netI_over_sigmaI 20.5 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.1 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_unique_obs _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.54 2.63 99.4 ? 0.54 3.9 6.2 ? ? ? ? ? ? 1 1 2.63 2.74 99.7 ? ? ? ? ? ? ? ? ? ? 2 1 2.74 2.86 99.7 ? ? ? ? ? ? ? ? ? ? 3 1 2.86 3.01 99.9 ? ? ? ? ? ? ? ? ? ? 4 1 3.01 3.2 99.9 ? ? ? ? ? ? ? ? ? ? 5 1 3.2 3.45 99.9 ? ? ? ? ? ? ? ? ? ? 6 1 # _refine.entry_id 4FMK _refine.ls_number_reflns_obs 14118 _refine.ls_number_reflns_all 14118 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.00 _refine.ls_d_res_high 2.56 _refine.ls_percent_reflns_obs 99.50 _refine.ls_R_factor_obs 0.22332 _refine.ls_R_factor_all 0.22332 _refine.ls_R_factor_R_work 0.22117 _refine.ls_R_factor_R_free 0.26755 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 708 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.952 _refine.correlation_coeff_Fo_to_Fc_free 0.926 _refine.B_iso_mean 88.031 _refine.aniso_B[1][1] 4.63 _refine.aniso_B[2][2] 4.63 _refine.aniso_B[3][3] -6.95 _refine.aniso_B[1][2] 2.32 _refine.aniso_B[1][3] -0.00 _refine.aniso_B[2][3] -0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB ENTRY 3ALP' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.328 _refine.pdbx_overall_ESU_R_Free 0.262 _refine.overall_SU_ML 0.225 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 19.933 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1717 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 135 _refine_hist.number_atoms_solvent 36 _refine_hist.number_atoms_total 1888 _refine_hist.d_res_high 2.56 _refine_hist.d_res_low 20.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.016 0.019 ? 1902 ? 'X-RAY DIFFRACTION' r_bond_other_d 0.002 0.020 ? 1294 ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.667 2.035 ? 2612 ? 'X-RAY DIFFRACTION' r_angle_other_deg 1.094 3.003 ? 3100 ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 6.311 5.000 ? 220 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 37.712 21.951 ? 82 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 17.677 15.000 ? 272 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 18.521 15.000 ? 22 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.091 0.200 ? 325 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.009 0.021 ? 2011 ? 'X-RAY DIFFRACTION' r_gen_planes_other 0.004 0.020 ? 385 ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.56 _refine_ls_shell.d_res_low 2.627 _refine_ls_shell.number_reflns_R_work 898 _refine_ls_shell.R_factor_R_work 0.372 _refine_ls_shell.percent_reflns_obs 98.04 _refine_ls_shell.R_factor_R_free 0.506 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 53 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4FMK _struct.title 'Crystal structure of mouse nectin-2 extracellular fragment D1-D2' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4FMK _struct_keywords.pdbx_keywords 'CELL ADHESION' _struct_keywords.text 'Immunoglobulin-like domain, Ig domain, viral entry receptor, CELL ADHESION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ARG A 91 ? GLU A 95 ? ARG A 122 GLU A 126 5 ? 5 HELX_P HELX_P2 2 VAL A 188 ? ASP A 192 ? VAL A 219 ASP A 223 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 23 SG ? ? ? 1_555 A CYS 100 SG ? ? A CYS 54 A CYS 131 1_555 ? ? ? ? ? ? ? 2.046 ? ? disulf2 disulf ? ? A CYS 143 SG ? ? ? 1_555 A CYS 198 SG ? ? A CYS 174 A CYS 229 1_555 ? ? ? ? ? ? ? 1.994 ? ? covale1 covale one ? A ASN 97 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 128 C NAG 1 1_555 ? ? ? ? ? ? ? 1.440 ? N-Glycosylation covale2 covale one ? A ASN 107 ND2 ? ? ? 1_555 B NAG . C1 ? ? A ASN 138 B NAG 1 1_555 ? ? ? ? ? ? ? 1.448 ? N-Glycosylation covale3 covale both ? B NAG . O4 ? ? ? 1_555 B NAG . C1 ? ? B NAG 1 B NAG 2 1_555 ? ? ? ? ? ? ? 1.447 ? ? covale4 covale both ? B NAG . O6 ? ? ? 1_555 B FUC . C1 ? ? B NAG 1 B FUC 6 1_555 ? ? ? ? ? ? ? 1.442 ? ? covale5 covale both ? B NAG . O4 ? ? ? 1_555 B BMA . C1 ? ? B NAG 2 B BMA 3 1_555 ? ? ? ? ? ? ? 1.447 ? ? covale6 covale both ? B BMA . O3 ? ? ? 1_555 B MAN . C1 ? ? B BMA 3 B MAN 4 1_555 ? ? ? ? ? ? ? 1.447 ? ? covale7 covale both ? B BMA . O6 ? ? ? 1_555 B MAN . C1 ? ? B BMA 3 B MAN 5 1_555 ? ? ? ? ? ? ? 1.446 ? ? covale8 covale both ? C NAG . O4 ? ? ? 1_555 C NAG . C1 ? ? C NAG 1 C NAG 2 1_555 ? ? ? ? ? ? ? 1.461 ? ? covale9 covale both ? C NAG . O6 ? ? ? 1_555 C FUC . C1 ? ? C NAG 1 C FUC 5 1_555 ? ? ? ? ? ? ? 1.462 ? ? covale10 covale both ? C NAG . O4 ? ? ? 1_555 C BMA . C1 ? ? C NAG 2 C BMA 3 1_555 ? ? ? ? ? ? ? 1.450 ? ? covale11 covale both ? C BMA . O3 ? ? ? 1_555 C MAN . C1 ? ? C BMA 3 C MAN 4 1_555 ? ? ? ? ? ? ? 1.441 ? ? metalc1 metalc ? ? A HIS 125 NE2 ? ? ? 1_555 D CD . CD ? ? A HIS 156 A CD 312 1_555 ? ? ? ? ? ? ? 2.580 ? ? metalc2 metalc ? ? A GLU 127 OE2 ? ? ? 1_555 D CD . CD ? ? A GLU 158 A CD 312 1_555 ? ? ? ? ? ? ? 2.615 ? ? metalc3 metalc ? ? A GLU 127 OE1 ? ? ? 1_555 D CD . CD ? ? A GLU 158 A CD 312 1_555 ? ? ? ? ? ? ? 2.692 ? ? metalc4 metalc ? ? A ASP 192 OD2 ? ? ? 1_555 E CD . CD ? ? A ASP 223 A CD 313 1_555 ? ? ? ? ? ? ? 2.216 ? ? metalc5 metalc ? ? A ASP 192 OD1 ? ? ? 1_555 E CD . CD ? ? A ASP 223 A CD 313 1_555 ? ? ? ? ? ? ? 2.288 ? ? metalc6 metalc ? ? A HIS 220 ND1 ? ? ? 1_555 G CD . CD ? ? A HIS 251 A CD 315 1_555 ? ? ? ? ? ? ? 2.529 ? ? metalc7 metalc ? ? A HIS 221 ND1 ? ? ? 1_555 E CD . CD ? ? A HIS 252 A CD 313 1_555 ? ? ? ? ? ? ? 2.191 ? ? metalc8 metalc ? ? E CD . CD ? ? ? 1_555 H HOH . O ? ? A CD 313 A HOH 418 1_555 ? ? ? ? ? ? ? 2.113 ? ? metalc9 metalc ? ? E CD . CD ? ? ? 1_555 H HOH . O ? ? A CD 313 A HOH 419 1_555 ? ? ? ? ? ? ? 1.874 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? metalc ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 PRO 27 A . ? PRO 58 A PRO 28 A ? PRO 59 A 1 -14.91 2 PHE 105 A . ? PHE 136 A PRO 106 A ? PRO 137 A 1 3.25 3 ARG 149 A . ? ARG 180 A PRO 150 A ? PRO 181 A 1 -2.25 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 6 ? C ? 3 ? D ? 4 ? E ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 5 ? ARG A 6 ? VAL A 36 ARG A 37 A 2 HIS A 24 ? LEU A 25 ? HIS A 55 LEU A 56 B 1 GLU A 10 ? ARG A 14 ? GLU A 41 ARG A 45 B 2 GLY A 108 ? ILE A 119 ? GLY A 139 ILE A 150 B 3 GLY A 96 ? PHE A 105 ? GLY A 127 PHE A 136 B 4 ARG A 32 ? GLN A 39 ? ARG A 63 GLN A 70 B 5 VAL A 45 ? HIS A 50 ? VAL A 76 HIS A 81 B 6 GLY A 54 ? ASP A 56 ? GLY A 85 ASP A 87 C 1 VAL A 19 ? LEU A 21 ? VAL A 50 LEU A 52 C 2 LEU A 85 ? PHE A 87 ? LEU A 116 PHE A 118 C 3 LEU A 67 ? PHE A 69 ? LEU A 98 PHE A 100 D 1 GLU A 123 ? ALA A 128 ? GLU A 154 ALA A 159 D 2 VAL A 138 ? GLY A 148 ? VAL A 169 GLY A 179 D 3 VAL A 177 ? LEU A 185 ? VAL A 208 LEU A 216 D 4 GLU A 163 ? PRO A 170 ? GLU A 194 PRO A 201 E 1 ARG A 153 ? ILE A 157 ? ARG A 184 ILE A 188 E 2 LYS A 195 ? GLU A 201 ? LYS A 226 GLU A 232 E 3 ILE A 209 ? THR A 214 ? ILE A 240 THR A 245 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ARG A 6 ? N ARG A 37 O HIS A 24 ? O HIS A 55 B 1 2 N GLY A 13 ? N GLY A 44 O ILE A 119 ? O ILE A 150 B 2 3 O GLY A 112 ? O GLY A 143 N CYS A 100 ? N CYS A 131 B 3 4 O ALA A 103 ? O ALA A 134 N SER A 34 ? N SER A 65 B 4 5 N VAL A 36 ? N VAL A 67 O PHE A 49 ? O PHE A 80 B 5 6 N ALA A 48 ? N ALA A 79 O ASP A 56 ? O ASP A 87 C 1 2 N LEU A 21 ? N LEU A 52 O LEU A 85 ? O LEU A 116 C 2 3 O ALA A 86 ? O ALA A 117 N SER A 68 ? N SER A 99 D 1 2 N HIS A 125 ? N HIS A 156 O VAL A 144 ? O VAL A 175 D 2 3 N ALA A 141 ? N ALA A 172 O TYR A 183 ? O TYR A 214 D 3 4 O THR A 178 ? O THR A 209 N GLU A 169 ? N GLU A 200 E 1 2 N THR A 155 ? N THR A 186 O ARG A 199 ? O ARG A 230 E 2 3 N VAL A 196 ? N VAL A 227 O VAL A 213 ? O VAL A 244 # _database_PDB_matrix.entry_id 4FMK _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4FMK _atom_sites.fract_transf_matrix[1][1] 0.014563 _atom_sites.fract_transf_matrix[1][2] 0.008408 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016816 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006265 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CD N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLN 1 32 ? ? ? A . n A 1 2 ASP 2 33 33 ASP ASP A . n A 1 3 VAL 3 34 34 VAL VAL A . n A 1 4 ARG 4 35 35 ARG ARG A . n A 1 5 VAL 5 36 36 VAL VAL A . n A 1 6 ARG 6 37 37 ARG ARG A . n A 1 7 VAL 7 38 38 VAL VAL A . n A 1 8 LEU 8 39 39 LEU LEU A . n A 1 9 PRO 9 40 40 PRO PRO A . n A 1 10 GLU 10 41 41 GLU GLU A . n A 1 11 VAL 11 42 42 VAL VAL A . n A 1 12 ARG 12 43 43 ARG ARG A . n A 1 13 GLY 13 44 44 GLY GLY A . n A 1 14 ARG 14 45 45 ARG ARG A . n A 1 15 LEU 15 46 46 LEU LEU A . n A 1 16 GLY 16 47 47 GLY GLY A . n A 1 17 GLY 17 48 48 GLY GLY A . n A 1 18 THR 18 49 49 THR THR A . n A 1 19 VAL 19 50 50 VAL VAL A . n A 1 20 GLU 20 51 51 GLU GLU A . n A 1 21 LEU 21 52 52 LEU LEU A . n A 1 22 PRO 22 53 53 PRO PRO A . n A 1 23 CYS 23 54 54 CYS CYS A . n A 1 24 HIS 24 55 55 HIS HIS A . n A 1 25 LEU 25 56 56 LEU LEU A . n A 1 26 LEU 26 57 57 LEU LEU A . n A 1 27 PRO 27 58 58 PRO PRO A . n A 1 28 PRO 28 59 59 PRO PRO A . n A 1 29 THR 29 60 60 THR THR A . n A 1 30 THR 30 61 61 THR THR A . n A 1 31 GLU 31 62 62 GLU GLU A . n A 1 32 ARG 32 63 63 ARG ARG A . n A 1 33 VAL 33 64 64 VAL VAL A . n A 1 34 SER 34 65 65 SER SER A . n A 1 35 GLN 35 66 66 GLN GLN A . n A 1 36 VAL 36 67 67 VAL VAL A . n A 1 37 THR 37 68 68 THR THR A . n A 1 38 TRP 38 69 69 TRP TRP A . n A 1 39 GLN 39 70 70 GLN GLN A . n A 1 40 ARG 40 71 71 ARG ARG A . n A 1 41 LEU 41 72 72 LEU LEU A . n A 1 42 ASP 42 73 73 ASP ASP A . n A 1 43 GLY 43 74 74 GLY GLY A . n A 1 44 THR 44 75 75 THR THR A . n A 1 45 VAL 45 76 76 VAL VAL A . n A 1 46 VAL 46 77 77 VAL VAL A . n A 1 47 ALA 47 78 78 ALA ALA A . n A 1 48 ALA 48 79 79 ALA ALA A . n A 1 49 PHE 49 80 80 PHE PHE A . n A 1 50 HIS 50 81 81 HIS HIS A . n A 1 51 PRO 51 82 82 PRO PRO A . n A 1 52 SER 52 83 83 SER SER A . n A 1 53 PHE 53 84 84 PHE PHE A . n A 1 54 GLY 54 85 85 GLY GLY A . n A 1 55 VAL 55 86 86 VAL VAL A . n A 1 56 ASP 56 87 87 ASP ASP A . n A 1 57 PHE 57 88 88 PHE PHE A . n A 1 58 PRO 58 89 89 PRO PRO A . n A 1 59 ASN 59 90 90 ASN ASN A . n A 1 60 SER 60 91 91 SER SER A . n A 1 61 GLN 61 92 92 GLN GLN A . n A 1 62 PHE 62 93 93 PHE PHE A . n A 1 63 SER 63 94 94 SER SER A . n A 1 64 LYS 64 95 95 LYS LYS A . n A 1 65 ASP 65 96 96 ASP ASP A . n A 1 66 ARG 66 97 97 ARG ARG A . n A 1 67 LEU 67 98 98 LEU LEU A . n A 1 68 SER 68 99 99 SER SER A . n A 1 69 PHE 69 100 100 PHE PHE A . n A 1 70 VAL 70 101 101 VAL VAL A . n A 1 71 ARG 71 102 102 ARG ARG A . n A 1 72 ALA 72 103 103 ALA ALA A . n A 1 73 ARG 73 104 104 ARG ARG A . n A 1 74 PRO 74 105 105 PRO PRO A . n A 1 75 GLU 75 106 106 GLU GLU A . n A 1 76 THR 76 107 107 THR THR A . n A 1 77 ASN 77 108 108 ASN ASN A . n A 1 78 ALA 78 109 109 ALA ALA A . n A 1 79 ASP 79 110 110 ASP ASP A . n A 1 80 LEU 80 111 111 LEU LEU A . n A 1 81 ARG 81 112 112 ARG ARG A . n A 1 82 ASP 82 113 113 ASP ASP A . n A 1 83 ALA 83 114 114 ALA ALA A . n A 1 84 THR 84 115 115 THR THR A . n A 1 85 LEU 85 116 116 LEU LEU A . n A 1 86 ALA 86 117 117 ALA ALA A . n A 1 87 PHE 87 118 118 PHE PHE A . n A 1 88 ARG 88 119 119 ARG ARG A . n A 1 89 GLY 89 120 120 GLY GLY A . n A 1 90 LEU 90 121 121 LEU LEU A . n A 1 91 ARG 91 122 122 ARG ARG A . n A 1 92 VAL 92 123 123 VAL VAL A . n A 1 93 GLU 93 124 124 GLU GLU A . n A 1 94 ASP 94 125 125 ASP ASP A . n A 1 95 GLU 95 126 126 GLU GLU A . n A 1 96 GLY 96 127 127 GLY GLY A . n A 1 97 ASN 97 128 128 ASN ASN A . n A 1 98 TYR 98 129 129 TYR TYR A . n A 1 99 THR 99 130 130 THR THR A . n A 1 100 CYS 100 131 131 CYS CYS A . n A 1 101 GLU 101 132 132 GLU GLU A . n A 1 102 PHE 102 133 133 PHE PHE A . n A 1 103 ALA 103 134 134 ALA ALA A . n A 1 104 THR 104 135 135 THR THR A . n A 1 105 PHE 105 136 136 PHE PHE A . n A 1 106 PRO 106 137 137 PRO PRO A . n A 1 107 ASN 107 138 138 ASN ASN A . n A 1 108 GLY 108 139 139 GLY GLY A . n A 1 109 THR 109 140 140 THR THR A . n A 1 110 ARG 110 141 141 ARG ARG A . n A 1 111 ARG 111 142 142 ARG ARG A . n A 1 112 GLY 112 143 143 GLY GLY A . n A 1 113 VAL 113 144 144 VAL VAL A . n A 1 114 THR 114 145 145 THR THR A . n A 1 115 TRP 115 146 146 TRP TRP A . n A 1 116 LEU 116 147 147 LEU LEU A . n A 1 117 ARG 117 148 148 ARG ARG A . n A 1 118 VAL 118 149 149 VAL VAL A . n A 1 119 ILE 119 150 150 ILE ILE A . n A 1 120 ALA 120 151 151 ALA ALA A . n A 1 121 GLN 121 152 152 GLN GLN A . n A 1 122 PRO 122 153 153 PRO PRO A . n A 1 123 GLU 123 154 154 GLU GLU A . n A 1 124 ASN 124 155 155 ASN ASN A . n A 1 125 HIS 125 156 156 HIS HIS A . n A 1 126 ALA 126 157 157 ALA ALA A . n A 1 127 GLU 127 158 158 GLU GLU A . n A 1 128 ALA 128 159 159 ALA ALA A . n A 1 129 GLN 129 160 160 GLN GLN A . n A 1 130 GLU 130 161 161 GLU GLU A . n A 1 131 VAL 131 162 162 VAL VAL A . n A 1 132 THR 132 163 163 THR THR A . n A 1 133 ILE 133 164 164 ILE ILE A . n A 1 134 GLY 134 165 165 GLY GLY A . n A 1 135 PRO 135 166 166 PRO PRO A . n A 1 136 GLN 136 167 167 GLN GLN A . n A 1 137 SER 137 168 168 SER SER A . n A 1 138 VAL 138 169 169 VAL VAL A . n A 1 139 ALA 139 170 170 ALA ALA A . n A 1 140 VAL 140 171 171 VAL VAL A . n A 1 141 ALA 141 172 172 ALA ALA A . n A 1 142 ARG 142 173 173 ARG ARG A . n A 1 143 CYS 143 174 174 CYS CYS A . n A 1 144 VAL 144 175 175 VAL VAL A . n A 1 145 SER 145 176 176 SER SER A . n A 1 146 THR 146 177 177 THR THR A . n A 1 147 GLY 147 178 178 GLY GLY A . n A 1 148 GLY 148 179 179 GLY GLY A . n A 1 149 ARG 149 180 180 ARG ARG A . n A 1 150 PRO 150 181 181 PRO PRO A . n A 1 151 PRO 151 182 182 PRO PRO A . n A 1 152 ALA 152 183 183 ALA ALA A . n A 1 153 ARG 153 184 184 ARG ARG A . n A 1 154 ILE 154 185 185 ILE ILE A . n A 1 155 THR 155 186 186 THR THR A . n A 1 156 TRP 156 187 187 TRP TRP A . n A 1 157 ILE 157 188 188 ILE ILE A . n A 1 158 SER 158 189 189 SER SER A . n A 1 159 SER 159 190 190 SER SER A . n A 1 160 LEU 160 191 191 LEU LEU A . n A 1 161 GLY 161 192 192 GLY GLY A . n A 1 162 GLY 162 193 193 GLY GLY A . n A 1 163 GLU 163 194 194 GLU GLU A . n A 1 164 ALA 164 195 195 ALA ALA A . n A 1 165 LYS 165 196 196 LYS LYS A . n A 1 166 ASP 166 197 197 ASP ASP A . n A 1 167 THR 167 198 198 THR THR A . n A 1 168 GLN 168 199 199 GLN GLN A . n A 1 169 GLU 169 200 200 GLU GLU A . n A 1 170 PRO 170 201 201 PRO PRO A . n A 1 171 GLY 171 202 202 GLY GLY A . n A 1 172 ILE 172 203 203 ILE ILE A . n A 1 173 GLN 173 204 204 GLN GLN A . n A 1 174 ALA 174 205 205 ALA ALA A . n A 1 175 GLY 175 206 206 GLY GLY A . n A 1 176 THR 176 207 207 THR THR A . n A 1 177 VAL 177 208 208 VAL VAL A . n A 1 178 THR 178 209 209 THR THR A . n A 1 179 ILE 179 210 210 ILE ILE A . n A 1 180 ILE 180 211 211 ILE ILE A . n A 1 181 SER 181 212 212 SER SER A . n A 1 182 ARG 182 213 213 ARG ARG A . n A 1 183 TYR 183 214 214 TYR TYR A . n A 1 184 SER 184 215 215 SER SER A . n A 1 185 LEU 185 216 216 LEU LEU A . n A 1 186 VAL 186 217 217 VAL VAL A . n A 1 187 PRO 187 218 218 PRO PRO A . n A 1 188 VAL 188 219 219 VAL VAL A . n A 1 189 GLY 189 220 220 GLY GLY A . n A 1 190 ARG 190 221 221 ARG ARG A . n A 1 191 ALA 191 222 222 ALA ALA A . n A 1 192 ASP 192 223 223 ASP ASP A . n A 1 193 GLY 193 224 224 GLY GLY A . n A 1 194 VAL 194 225 225 VAL VAL A . n A 1 195 LYS 195 226 226 LYS LYS A . n A 1 196 VAL 196 227 227 VAL VAL A . n A 1 197 THR 197 228 228 THR THR A . n A 1 198 CYS 198 229 229 CYS CYS A . n A 1 199 ARG 199 230 230 ARG ARG A . n A 1 200 VAL 200 231 231 VAL VAL A . n A 1 201 GLU 201 232 232 GLU GLU A . n A 1 202 HIS 202 233 233 HIS HIS A . n A 1 203 GLU 203 234 234 GLU GLU A . n A 1 204 SER 204 235 235 SER SER A . n A 1 205 PHE 205 236 236 PHE PHE A . n A 1 206 GLU 206 237 237 GLU GLU A . n A 1 207 GLU 207 238 238 GLU GLU A . n A 1 208 PRO 208 239 239 PRO PRO A . n A 1 209 ILE 209 240 240 ILE ILE A . n A 1 210 LEU 210 241 241 LEU LEU A . n A 1 211 LEU 211 242 242 LEU LEU A . n A 1 212 PRO 212 243 243 PRO PRO A . n A 1 213 VAL 213 244 244 VAL VAL A . n A 1 214 THR 214 245 245 THR THR A . n A 1 215 LEU 215 246 246 LEU LEU A . n A 1 216 SER 216 247 247 SER SER A . n A 1 217 VAL 217 248 248 VAL VAL A . n A 1 218 ARG 218 249 249 ARG ARG A . n A 1 219 TYR 219 250 250 TYR TYR A . n A 1 220 HIS 220 251 251 HIS HIS A . n A 1 221 HIS 221 252 252 HIS HIS A . n A 1 222 HIS 222 253 253 HIS HIS A . n A 1 223 HIS 223 254 ? ? ? A . n A 1 224 HIS 224 255 ? ? ? A . n A 1 225 HIS 225 256 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 CD 1 312 1 CD CD A . E 4 CD 1 313 3 CD CD A . F 4 CD 1 314 4 CD CD A . G 4 CD 1 315 5 CD CD A . H 5 HOH 1 401 1 HOH HOH A . H 5 HOH 2 402 2 HOH HOH A . H 5 HOH 3 403 3 HOH HOH A . H 5 HOH 4 404 4 HOH HOH A . H 5 HOH 5 405 5 HOH HOH A . H 5 HOH 6 406 6 HOH HOH A . H 5 HOH 7 407 7 HOH HOH A . H 5 HOH 8 408 8 HOH HOH A . H 5 HOH 9 409 9 HOH HOH A . H 5 HOH 10 410 10 HOH HOH A . H 5 HOH 11 411 11 HOH HOH A . H 5 HOH 12 412 12 HOH HOH A . H 5 HOH 13 413 13 HOH HOH A . H 5 HOH 14 414 14 HOH HOH A . H 5 HOH 15 415 15 HOH HOH A . H 5 HOH 16 416 16 HOH HOH A . H 5 HOH 17 417 17 HOH HOH A . H 5 HOH 18 418 18 HOH HOH A . H 5 HOH 19 419 19 HOH HOH A . H 5 HOH 20 420 20 HOH HOH A . H 5 HOH 21 421 21 HOH HOH A . H 5 HOH 22 422 22 HOH HOH A . H 5 HOH 23 423 23 HOH HOH A . H 5 HOH 24 424 24 HOH HOH A . H 5 HOH 25 425 25 HOH HOH A . H 5 HOH 26 426 26 HOH HOH A . H 5 HOH 27 427 27 HOH HOH A . H 5 HOH 28 428 28 HOH HOH A . H 5 HOH 29 429 29 HOH HOH A . H 5 HOH 30 430 30 HOH HOH A . H 5 HOH 31 431 31 HOH HOH A . H 5 HOH 32 432 32 HOH HOH A . H 5 HOH 33 433 33 HOH HOH A . H 5 HOH 34 434 34 HOH HOH A . H 5 HOH 35 435 35 HOH HOH A . H 5 HOH 36 436 36 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A ASN 97 A ASN 128 ? ASN 'GLYCOSYLATION SITE' 2 A ASN 107 A ASN 138 ? ASN 'GLYCOSYLATION SITE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 6_555 x,x-y,-z 0.5000000000 0.8660254038 0.0000000000 0.0000000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 125 ? A HIS 156 ? 1_555 CD ? D CD . ? A CD 312 ? 1_555 OE2 ? A GLU 127 ? A GLU 158 ? 1_555 64.2 ? 2 NE2 ? A HIS 125 ? A HIS 156 ? 1_555 CD ? D CD . ? A CD 312 ? 1_555 OE1 ? A GLU 127 ? A GLU 158 ? 1_555 112.8 ? 3 OE2 ? A GLU 127 ? A GLU 158 ? 1_555 CD ? D CD . ? A CD 312 ? 1_555 OE1 ? A GLU 127 ? A GLU 158 ? 1_555 48.7 ? 4 OD2 ? A ASP 192 ? A ASP 223 ? 1_555 CD ? E CD . ? A CD 313 ? 1_555 OD1 ? A ASP 192 ? A ASP 223 ? 1_555 57.7 ? 5 OD2 ? A ASP 192 ? A ASP 223 ? 1_555 CD ? E CD . ? A CD 313 ? 1_555 ND1 ? A HIS 221 ? A HIS 252 ? 1_555 107.8 ? 6 OD1 ? A ASP 192 ? A ASP 223 ? 1_555 CD ? E CD . ? A CD 313 ? 1_555 ND1 ? A HIS 221 ? A HIS 252 ? 1_555 72.4 ? 7 OD2 ? A ASP 192 ? A ASP 223 ? 1_555 CD ? E CD . ? A CD 313 ? 1_555 O ? H HOH . ? A HOH 418 ? 1_555 76.9 ? 8 OD1 ? A ASP 192 ? A ASP 223 ? 1_555 CD ? E CD . ? A CD 313 ? 1_555 O ? H HOH . ? A HOH 418 ? 1_555 130.7 ? 9 ND1 ? A HIS 221 ? A HIS 252 ? 1_555 CD ? E CD . ? A CD 313 ? 1_555 O ? H HOH . ? A HOH 418 ? 1_555 146.5 ? 10 OD2 ? A ASP 192 ? A ASP 223 ? 1_555 CD ? E CD . ? A CD 313 ? 1_555 O ? H HOH . ? A HOH 419 ? 1_555 153.5 ? 11 OD1 ? A ASP 192 ? A ASP 223 ? 1_555 CD ? E CD . ? A CD 313 ? 1_555 O ? H HOH . ? A HOH 419 ? 1_555 148.2 ? 12 ND1 ? A HIS 221 ? A HIS 252 ? 1_555 CD ? E CD . ? A CD 313 ? 1_555 O ? H HOH . ? A HOH 419 ? 1_555 84.6 ? 13 O ? H HOH . ? A HOH 418 ? 1_555 CD ? E CD . ? A CD 313 ? 1_555 O ? H HOH . ? A HOH 419 ? 1_555 80.1 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-08-22 2 'Structure model' 1 1 2012-09-05 3 'Structure model' 1 2 2012-09-26 4 'Structure model' 2 0 2020-07-29 5 'Structure model' 2 1 2023-09-13 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Atomic model' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' 'Structure summary' 8 5 'Structure model' 'Data collection' 9 5 'Structure model' 'Database references' 10 5 'Structure model' 'Refinement description' 11 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' atom_site 2 4 'Structure model' chem_comp 3 4 'Structure model' entity 4 4 'Structure model' pdbx_branch_scheme 5 4 'Structure model' pdbx_chem_comp_identifier 6 4 'Structure model' pdbx_entity_branch 7 4 'Structure model' pdbx_entity_branch_descriptor 8 4 'Structure model' pdbx_entity_branch_link 9 4 'Structure model' pdbx_entity_branch_list 10 4 'Structure model' pdbx_entity_nonpoly 11 4 'Structure model' pdbx_nonpoly_scheme 12 4 'Structure model' pdbx_struct_assembly_gen 13 4 'Structure model' pdbx_struct_conn_angle 14 4 'Structure model' struct_asym 15 4 'Structure model' struct_conn 16 4 'Structure model' struct_ref_seq_dif 17 4 'Structure model' struct_site 18 4 'Structure model' struct_site_gen 19 5 'Structure model' chem_comp 20 5 'Structure model' chem_comp_atom 21 5 'Structure model' chem_comp_bond 22 5 'Structure model' database_2 23 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_atom_site.B_iso_or_equiv' 2 4 'Structure model' '_atom_site.Cartn_x' 3 4 'Structure model' '_atom_site.Cartn_y' 4 4 'Structure model' '_atom_site.Cartn_z' 5 4 'Structure model' '_atom_site.auth_asym_id' 6 4 'Structure model' '_atom_site.auth_seq_id' 7 4 'Structure model' '_atom_site.label_asym_id' 8 4 'Structure model' '_atom_site.label_entity_id' 9 4 'Structure model' '_chem_comp.name' 10 4 'Structure model' '_chem_comp.type' 11 4 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 20 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 21 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 22 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 23 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 24 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 25 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 26 4 'Structure model' '_pdbx_struct_conn_angle.value' 27 4 'Structure model' '_struct_conn.pdbx_dist_value' 28 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 29 4 'Structure model' '_struct_conn.pdbx_role' 30 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 31 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 32 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 33 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 34 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 35 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 36 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 37 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 38 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 39 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 40 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 41 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 42 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 43 4 'Structure model' '_struct_ref_seq_dif.details' 44 5 'Structure model' '_chem_comp.pdbx_synonyms' 45 5 'Structure model' '_database_2.pdbx_DOI' 46 5 'Structure model' '_database_2.pdbx_database_accession' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined -2.1263 -6.5942 12.4698 0.1830 0.1500 0.1112 0.0071 -0.0421 0.0095 3.6904 6.1190 12.1248 -0.4166 -3.5020 -1.7158 0.1367 0.0601 -0.3477 -0.1856 0.1807 -0.1644 0.2831 0.0080 -0.3174 'X-RAY DIFFRACTION' 2 ? refined -25.7599 -26.6359 41.3354 0.3535 0.5670 0.3846 -0.0340 0.0580 0.2914 4.9334 9.4149 6.4137 3.6785 -2.2757 -5.2491 -0.0012 0.4302 -0.2286 -0.4558 0.3360 0.4310 0.6556 -0.7015 -0.3348 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 33 ? ? A 149 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 150 ? ? A 253 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 PHASER phasing . ? 2 REFMAC refinement 5.6.0117 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 OE1 _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 GLU _pdbx_validate_symm_contact.auth_seq_id_1 161 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 CD _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 CD _pdbx_validate_symm_contact.auth_seq_id_2 312 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 4_445 _pdbx_validate_symm_contact.dist 2.18 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CG A HIS 55 ? ? CD2 A HIS 55 ? ? 1.409 1.354 0.055 0.009 N 2 1 CB A ASP 110 ? ? CG A ASP 110 ? ? 1.654 1.513 0.141 0.021 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 105 ? ? -78.15 36.32 2 1 THR A 107 ? ? -142.30 32.26 3 1 ILE A 164 ? ? -42.28 152.72 4 1 PRO A 181 ? ? -65.73 -173.91 5 1 LEU A 191 ? ? -69.60 -175.56 6 1 PRO A 218 ? ? -66.17 95.45 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLN 32 ? A GLN 1 2 1 Y 1 A HIS 254 ? A HIS 223 3 1 Y 1 A HIS 255 ? A HIS 224 4 1 Y 1 A HIS 256 ? A HIS 225 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BMA C1 C N R 74 BMA C2 C N S 75 BMA C3 C N S 76 BMA C4 C N S 77 BMA C5 C N R 78 BMA C6 C N N 79 BMA O1 O N N 80 BMA O2 O N N 81 BMA O3 O N N 82 BMA O4 O N N 83 BMA O5 O N N 84 BMA O6 O N N 85 BMA H1 H N N 86 BMA H2 H N N 87 BMA H3 H N N 88 BMA H4 H N N 89 BMA H5 H N N 90 BMA H61 H N N 91 BMA H62 H N N 92 BMA HO1 H N N 93 BMA HO2 H N N 94 BMA HO3 H N N 95 BMA HO4 H N N 96 BMA HO6 H N N 97 CD CD CD N N 98 CYS N N N N 99 CYS CA C N R 100 CYS C C N N 101 CYS O O N N 102 CYS CB C N N 103 CYS SG S N N 104 CYS OXT O N N 105 CYS H H N N 106 CYS H2 H N N 107 CYS HA H N N 108 CYS HB2 H N N 109 CYS HB3 H N N 110 CYS HG H N N 111 CYS HXT H N N 112 FUC C1 C N R 113 FUC C2 C N S 114 FUC C3 C N R 115 FUC C4 C N S 116 FUC C5 C N S 117 FUC C6 C N N 118 FUC O1 O N N 119 FUC O2 O N N 120 FUC O3 O N N 121 FUC O4 O N N 122 FUC O5 O N N 123 FUC H1 H N N 124 FUC H2 H N N 125 FUC H3 H N N 126 FUC H4 H N N 127 FUC H5 H N N 128 FUC H61 H N N 129 FUC H62 H N N 130 FUC H63 H N N 131 FUC HO1 H N N 132 FUC HO2 H N N 133 FUC HO3 H N N 134 FUC HO4 H N N 135 GLN N N N N 136 GLN CA C N S 137 GLN C C N N 138 GLN O O N N 139 GLN CB C N N 140 GLN CG C N N 141 GLN CD C N N 142 GLN OE1 O N N 143 GLN NE2 N N N 144 GLN OXT O N N 145 GLN H H N N 146 GLN H2 H N N 147 GLN HA H N N 148 GLN HB2 H N N 149 GLN HB3 H N N 150 GLN HG2 H N N 151 GLN HG3 H N N 152 GLN HE21 H N N 153 GLN HE22 H N N 154 GLN HXT H N N 155 GLU N N N N 156 GLU CA C N S 157 GLU C C N N 158 GLU O O N N 159 GLU CB C N N 160 GLU CG C N N 161 GLU CD C N N 162 GLU OE1 O N N 163 GLU OE2 O N N 164 GLU OXT O N N 165 GLU H H N N 166 GLU H2 H N N 167 GLU HA H N N 168 GLU HB2 H N N 169 GLU HB3 H N N 170 GLU HG2 H N N 171 GLU HG3 H N N 172 GLU HE2 H N N 173 GLU HXT H N N 174 GLY N N N N 175 GLY CA C N N 176 GLY C C N N 177 GLY O O N N 178 GLY OXT O N N 179 GLY H H N N 180 GLY H2 H N N 181 GLY HA2 H N N 182 GLY HA3 H N N 183 GLY HXT H N N 184 HIS N N N N 185 HIS CA C N S 186 HIS C C N N 187 HIS O O N N 188 HIS CB C N N 189 HIS CG C Y N 190 HIS ND1 N Y N 191 HIS CD2 C Y N 192 HIS CE1 C Y N 193 HIS NE2 N Y N 194 HIS OXT O N N 195 HIS H H N N 196 HIS H2 H N N 197 HIS HA H N N 198 HIS HB2 H N N 199 HIS HB3 H N N 200 HIS HD1 H N N 201 HIS HD2 H N N 202 HIS HE1 H N N 203 HIS HE2 H N N 204 HIS HXT H N N 205 HOH O O N N 206 HOH H1 H N N 207 HOH H2 H N N 208 ILE N N N N 209 ILE CA C N S 210 ILE C C N N 211 ILE O O N N 212 ILE CB C N S 213 ILE CG1 C N N 214 ILE CG2 C N N 215 ILE CD1 C N N 216 ILE OXT O N N 217 ILE H H N N 218 ILE H2 H N N 219 ILE HA H N N 220 ILE HB H N N 221 ILE HG12 H N N 222 ILE HG13 H N N 223 ILE HG21 H N N 224 ILE HG22 H N N 225 ILE HG23 H N N 226 ILE HD11 H N N 227 ILE HD12 H N N 228 ILE HD13 H N N 229 ILE HXT H N N 230 LEU N N N N 231 LEU CA C N S 232 LEU C C N N 233 LEU O O N N 234 LEU CB C N N 235 LEU CG C N N 236 LEU CD1 C N N 237 LEU CD2 C N N 238 LEU OXT O N N 239 LEU H H N N 240 LEU H2 H N N 241 LEU HA H N N 242 LEU HB2 H N N 243 LEU HB3 H N N 244 LEU HG H N N 245 LEU HD11 H N N 246 LEU HD12 H N N 247 LEU HD13 H N N 248 LEU HD21 H N N 249 LEU HD22 H N N 250 LEU HD23 H N N 251 LEU HXT H N N 252 LYS N N N N 253 LYS CA C N S 254 LYS C C N N 255 LYS O O N N 256 LYS CB C N N 257 LYS CG C N N 258 LYS CD C N N 259 LYS CE C N N 260 LYS NZ N N N 261 LYS OXT O N N 262 LYS H H N N 263 LYS H2 H N N 264 LYS HA H N N 265 LYS HB2 H N N 266 LYS HB3 H N N 267 LYS HG2 H N N 268 LYS HG3 H N N 269 LYS HD2 H N N 270 LYS HD3 H N N 271 LYS HE2 H N N 272 LYS HE3 H N N 273 LYS HZ1 H N N 274 LYS HZ2 H N N 275 LYS HZ3 H N N 276 LYS HXT H N N 277 MAN C1 C N S 278 MAN C2 C N S 279 MAN C3 C N S 280 MAN C4 C N S 281 MAN C5 C N R 282 MAN C6 C N N 283 MAN O1 O N N 284 MAN O2 O N N 285 MAN O3 O N N 286 MAN O4 O N N 287 MAN O5 O N N 288 MAN O6 O N N 289 MAN H1 H N N 290 MAN H2 H N N 291 MAN H3 H N N 292 MAN H4 H N N 293 MAN H5 H N N 294 MAN H61 H N N 295 MAN H62 H N N 296 MAN HO1 H N N 297 MAN HO2 H N N 298 MAN HO3 H N N 299 MAN HO4 H N N 300 MAN HO6 H N N 301 NAG C1 C N R 302 NAG C2 C N R 303 NAG C3 C N R 304 NAG C4 C N S 305 NAG C5 C N R 306 NAG C6 C N N 307 NAG C7 C N N 308 NAG C8 C N N 309 NAG N2 N N N 310 NAG O1 O N N 311 NAG O3 O N N 312 NAG O4 O N N 313 NAG O5 O N N 314 NAG O6 O N N 315 NAG O7 O N N 316 NAG H1 H N N 317 NAG H2 H N N 318 NAG H3 H N N 319 NAG H4 H N N 320 NAG H5 H N N 321 NAG H61 H N N 322 NAG H62 H N N 323 NAG H81 H N N 324 NAG H82 H N N 325 NAG H83 H N N 326 NAG HN2 H N N 327 NAG HO1 H N N 328 NAG HO3 H N N 329 NAG HO4 H N N 330 NAG HO6 H N N 331 PHE N N N N 332 PHE CA C N S 333 PHE C C N N 334 PHE O O N N 335 PHE CB C N N 336 PHE CG C Y N 337 PHE CD1 C Y N 338 PHE CD2 C Y N 339 PHE CE1 C Y N 340 PHE CE2 C Y N 341 PHE CZ C Y N 342 PHE OXT O N N 343 PHE H H N N 344 PHE H2 H N N 345 PHE HA H N N 346 PHE HB2 H N N 347 PHE HB3 H N N 348 PHE HD1 H N N 349 PHE HD2 H N N 350 PHE HE1 H N N 351 PHE HE2 H N N 352 PHE HZ H N N 353 PHE HXT H N N 354 PRO N N N N 355 PRO CA C N S 356 PRO C C N N 357 PRO O O N N 358 PRO CB C N N 359 PRO CG C N N 360 PRO CD C N N 361 PRO OXT O N N 362 PRO H H N N 363 PRO HA H N N 364 PRO HB2 H N N 365 PRO HB3 H N N 366 PRO HG2 H N N 367 PRO HG3 H N N 368 PRO HD2 H N N 369 PRO HD3 H N N 370 PRO HXT H N N 371 SER N N N N 372 SER CA C N S 373 SER C C N N 374 SER O O N N 375 SER CB C N N 376 SER OG O N N 377 SER OXT O N N 378 SER H H N N 379 SER H2 H N N 380 SER HA H N N 381 SER HB2 H N N 382 SER HB3 H N N 383 SER HG H N N 384 SER HXT H N N 385 THR N N N N 386 THR CA C N S 387 THR C C N N 388 THR O O N N 389 THR CB C N R 390 THR OG1 O N N 391 THR CG2 C N N 392 THR OXT O N N 393 THR H H N N 394 THR H2 H N N 395 THR HA H N N 396 THR HB H N N 397 THR HG1 H N N 398 THR HG21 H N N 399 THR HG22 H N N 400 THR HG23 H N N 401 THR HXT H N N 402 TRP N N N N 403 TRP CA C N S 404 TRP C C N N 405 TRP O O N N 406 TRP CB C N N 407 TRP CG C Y N 408 TRP CD1 C Y N 409 TRP CD2 C Y N 410 TRP NE1 N Y N 411 TRP CE2 C Y N 412 TRP CE3 C Y N 413 TRP CZ2 C Y N 414 TRP CZ3 C Y N 415 TRP CH2 C Y N 416 TRP OXT O N N 417 TRP H H N N 418 TRP H2 H N N 419 TRP HA H N N 420 TRP HB2 H N N 421 TRP HB3 H N N 422 TRP HD1 H N N 423 TRP HE1 H N N 424 TRP HE3 H N N 425 TRP HZ2 H N N 426 TRP HZ3 H N N 427 TRP HH2 H N N 428 TRP HXT H N N 429 TYR N N N N 430 TYR CA C N S 431 TYR C C N N 432 TYR O O N N 433 TYR CB C N N 434 TYR CG C Y N 435 TYR CD1 C Y N 436 TYR CD2 C Y N 437 TYR CE1 C Y N 438 TYR CE2 C Y N 439 TYR CZ C Y N 440 TYR OH O N N 441 TYR OXT O N N 442 TYR H H N N 443 TYR H2 H N N 444 TYR HA H N N 445 TYR HB2 H N N 446 TYR HB3 H N N 447 TYR HD1 H N N 448 TYR HD2 H N N 449 TYR HE1 H N N 450 TYR HE2 H N N 451 TYR HH H N N 452 TYR HXT H N N 453 VAL N N N N 454 VAL CA C N S 455 VAL C C N N 456 VAL O O N N 457 VAL CB C N N 458 VAL CG1 C N N 459 VAL CG2 C N N 460 VAL OXT O N N 461 VAL H H N N 462 VAL H2 H N N 463 VAL HA H N N 464 VAL HB H N N 465 VAL HG11 H N N 466 VAL HG12 H N N 467 VAL HG13 H N N 468 VAL HG21 H N N 469 VAL HG22 H N N 470 VAL HG23 H N N 471 VAL HXT H N N 472 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BMA C1 C2 sing N N 70 BMA C1 O1 sing N N 71 BMA C1 O5 sing N N 72 BMA C1 H1 sing N N 73 BMA C2 C3 sing N N 74 BMA C2 O2 sing N N 75 BMA C2 H2 sing N N 76 BMA C3 C4 sing N N 77 BMA C3 O3 sing N N 78 BMA C3 H3 sing N N 79 BMA C4 C5 sing N N 80 BMA C4 O4 sing N N 81 BMA C4 H4 sing N N 82 BMA C5 C6 sing N N 83 BMA C5 O5 sing N N 84 BMA C5 H5 sing N N 85 BMA C6 O6 sing N N 86 BMA C6 H61 sing N N 87 BMA C6 H62 sing N N 88 BMA O1 HO1 sing N N 89 BMA O2 HO2 sing N N 90 BMA O3 HO3 sing N N 91 BMA O4 HO4 sing N N 92 BMA O6 HO6 sing N N 93 CYS N CA sing N N 94 CYS N H sing N N 95 CYS N H2 sing N N 96 CYS CA C sing N N 97 CYS CA CB sing N N 98 CYS CA HA sing N N 99 CYS C O doub N N 100 CYS C OXT sing N N 101 CYS CB SG sing N N 102 CYS CB HB2 sing N N 103 CYS CB HB3 sing N N 104 CYS SG HG sing N N 105 CYS OXT HXT sing N N 106 FUC C1 C2 sing N N 107 FUC C1 O1 sing N N 108 FUC C1 O5 sing N N 109 FUC C1 H1 sing N N 110 FUC C2 C3 sing N N 111 FUC C2 O2 sing N N 112 FUC C2 H2 sing N N 113 FUC C3 C4 sing N N 114 FUC C3 O3 sing N N 115 FUC C3 H3 sing N N 116 FUC C4 C5 sing N N 117 FUC C4 O4 sing N N 118 FUC C4 H4 sing N N 119 FUC C5 C6 sing N N 120 FUC C5 O5 sing N N 121 FUC C5 H5 sing N N 122 FUC C6 H61 sing N N 123 FUC C6 H62 sing N N 124 FUC C6 H63 sing N N 125 FUC O1 HO1 sing N N 126 FUC O2 HO2 sing N N 127 FUC O3 HO3 sing N N 128 FUC O4 HO4 sing N N 129 GLN N CA sing N N 130 GLN N H sing N N 131 GLN N H2 sing N N 132 GLN CA C sing N N 133 GLN CA CB sing N N 134 GLN CA HA sing N N 135 GLN C O doub N N 136 GLN C OXT sing N N 137 GLN CB CG sing N N 138 GLN CB HB2 sing N N 139 GLN CB HB3 sing N N 140 GLN CG CD sing N N 141 GLN CG HG2 sing N N 142 GLN CG HG3 sing N N 143 GLN CD OE1 doub N N 144 GLN CD NE2 sing N N 145 GLN NE2 HE21 sing N N 146 GLN NE2 HE22 sing N N 147 GLN OXT HXT sing N N 148 GLU N CA sing N N 149 GLU N H sing N N 150 GLU N H2 sing N N 151 GLU CA C sing N N 152 GLU CA CB sing N N 153 GLU CA HA sing N N 154 GLU C O doub N N 155 GLU C OXT sing N N 156 GLU CB CG sing N N 157 GLU CB HB2 sing N N 158 GLU CB HB3 sing N N 159 GLU CG CD sing N N 160 GLU CG HG2 sing N N 161 GLU CG HG3 sing N N 162 GLU CD OE1 doub N N 163 GLU CD OE2 sing N N 164 GLU OE2 HE2 sing N N 165 GLU OXT HXT sing N N 166 GLY N CA sing N N 167 GLY N H sing N N 168 GLY N H2 sing N N 169 GLY CA C sing N N 170 GLY CA HA2 sing N N 171 GLY CA HA3 sing N N 172 GLY C O doub N N 173 GLY C OXT sing N N 174 GLY OXT HXT sing N N 175 HIS N CA sing N N 176 HIS N H sing N N 177 HIS N H2 sing N N 178 HIS CA C sing N N 179 HIS CA CB sing N N 180 HIS CA HA sing N N 181 HIS C O doub N N 182 HIS C OXT sing N N 183 HIS CB CG sing N N 184 HIS CB HB2 sing N N 185 HIS CB HB3 sing N N 186 HIS CG ND1 sing Y N 187 HIS CG CD2 doub Y N 188 HIS ND1 CE1 doub Y N 189 HIS ND1 HD1 sing N N 190 HIS CD2 NE2 sing Y N 191 HIS CD2 HD2 sing N N 192 HIS CE1 NE2 sing Y N 193 HIS CE1 HE1 sing N N 194 HIS NE2 HE2 sing N N 195 HIS OXT HXT sing N N 196 HOH O H1 sing N N 197 HOH O H2 sing N N 198 ILE N CA sing N N 199 ILE N H sing N N 200 ILE N H2 sing N N 201 ILE CA C sing N N 202 ILE CA CB sing N N 203 ILE CA HA sing N N 204 ILE C O doub N N 205 ILE C OXT sing N N 206 ILE CB CG1 sing N N 207 ILE CB CG2 sing N N 208 ILE CB HB sing N N 209 ILE CG1 CD1 sing N N 210 ILE CG1 HG12 sing N N 211 ILE CG1 HG13 sing N N 212 ILE CG2 HG21 sing N N 213 ILE CG2 HG22 sing N N 214 ILE CG2 HG23 sing N N 215 ILE CD1 HD11 sing N N 216 ILE CD1 HD12 sing N N 217 ILE CD1 HD13 sing N N 218 ILE OXT HXT sing N N 219 LEU N CA sing N N 220 LEU N H sing N N 221 LEU N H2 sing N N 222 LEU CA C sing N N 223 LEU CA CB sing N N 224 LEU CA HA sing N N 225 LEU C O doub N N 226 LEU C OXT sing N N 227 LEU CB CG sing N N 228 LEU CB HB2 sing N N 229 LEU CB HB3 sing N N 230 LEU CG CD1 sing N N 231 LEU CG CD2 sing N N 232 LEU CG HG sing N N 233 LEU CD1 HD11 sing N N 234 LEU CD1 HD12 sing N N 235 LEU CD1 HD13 sing N N 236 LEU CD2 HD21 sing N N 237 LEU CD2 HD22 sing N N 238 LEU CD2 HD23 sing N N 239 LEU OXT HXT sing N N 240 LYS N CA sing N N 241 LYS N H sing N N 242 LYS N H2 sing N N 243 LYS CA C sing N N 244 LYS CA CB sing N N 245 LYS CA HA sing N N 246 LYS C O doub N N 247 LYS C OXT sing N N 248 LYS CB CG sing N N 249 LYS CB HB2 sing N N 250 LYS CB HB3 sing N N 251 LYS CG CD sing N N 252 LYS CG HG2 sing N N 253 LYS CG HG3 sing N N 254 LYS CD CE sing N N 255 LYS CD HD2 sing N N 256 LYS CD HD3 sing N N 257 LYS CE NZ sing N N 258 LYS CE HE2 sing N N 259 LYS CE HE3 sing N N 260 LYS NZ HZ1 sing N N 261 LYS NZ HZ2 sing N N 262 LYS NZ HZ3 sing N N 263 LYS OXT HXT sing N N 264 MAN C1 C2 sing N N 265 MAN C1 O1 sing N N 266 MAN C1 O5 sing N N 267 MAN C1 H1 sing N N 268 MAN C2 C3 sing N N 269 MAN C2 O2 sing N N 270 MAN C2 H2 sing N N 271 MAN C3 C4 sing N N 272 MAN C3 O3 sing N N 273 MAN C3 H3 sing N N 274 MAN C4 C5 sing N N 275 MAN C4 O4 sing N N 276 MAN C4 H4 sing N N 277 MAN C5 C6 sing N N 278 MAN C5 O5 sing N N 279 MAN C5 H5 sing N N 280 MAN C6 O6 sing N N 281 MAN C6 H61 sing N N 282 MAN C6 H62 sing N N 283 MAN O1 HO1 sing N N 284 MAN O2 HO2 sing N N 285 MAN O3 HO3 sing N N 286 MAN O4 HO4 sing N N 287 MAN O6 HO6 sing N N 288 NAG C1 C2 sing N N 289 NAG C1 O1 sing N N 290 NAG C1 O5 sing N N 291 NAG C1 H1 sing N N 292 NAG C2 C3 sing N N 293 NAG C2 N2 sing N N 294 NAG C2 H2 sing N N 295 NAG C3 C4 sing N N 296 NAG C3 O3 sing N N 297 NAG C3 H3 sing N N 298 NAG C4 C5 sing N N 299 NAG C4 O4 sing N N 300 NAG C4 H4 sing N N 301 NAG C5 C6 sing N N 302 NAG C5 O5 sing N N 303 NAG C5 H5 sing N N 304 NAG C6 O6 sing N N 305 NAG C6 H61 sing N N 306 NAG C6 H62 sing N N 307 NAG C7 C8 sing N N 308 NAG C7 N2 sing N N 309 NAG C7 O7 doub N N 310 NAG C8 H81 sing N N 311 NAG C8 H82 sing N N 312 NAG C8 H83 sing N N 313 NAG N2 HN2 sing N N 314 NAG O1 HO1 sing N N 315 NAG O3 HO3 sing N N 316 NAG O4 HO4 sing N N 317 NAG O6 HO6 sing N N 318 PHE N CA sing N N 319 PHE N H sing N N 320 PHE N H2 sing N N 321 PHE CA C sing N N 322 PHE CA CB sing N N 323 PHE CA HA sing N N 324 PHE C O doub N N 325 PHE C OXT sing N N 326 PHE CB CG sing N N 327 PHE CB HB2 sing N N 328 PHE CB HB3 sing N N 329 PHE CG CD1 doub Y N 330 PHE CG CD2 sing Y N 331 PHE CD1 CE1 sing Y N 332 PHE CD1 HD1 sing N N 333 PHE CD2 CE2 doub Y N 334 PHE CD2 HD2 sing N N 335 PHE CE1 CZ doub Y N 336 PHE CE1 HE1 sing N N 337 PHE CE2 CZ sing Y N 338 PHE CE2 HE2 sing N N 339 PHE CZ HZ sing N N 340 PHE OXT HXT sing N N 341 PRO N CA sing N N 342 PRO N CD sing N N 343 PRO N H sing N N 344 PRO CA C sing N N 345 PRO CA CB sing N N 346 PRO CA HA sing N N 347 PRO C O doub N N 348 PRO C OXT sing N N 349 PRO CB CG sing N N 350 PRO CB HB2 sing N N 351 PRO CB HB3 sing N N 352 PRO CG CD sing N N 353 PRO CG HG2 sing N N 354 PRO CG HG3 sing N N 355 PRO CD HD2 sing N N 356 PRO CD HD3 sing N N 357 PRO OXT HXT sing N N 358 SER N CA sing N N 359 SER N H sing N N 360 SER N H2 sing N N 361 SER CA C sing N N 362 SER CA CB sing N N 363 SER CA HA sing N N 364 SER C O doub N N 365 SER C OXT sing N N 366 SER CB OG sing N N 367 SER CB HB2 sing N N 368 SER CB HB3 sing N N 369 SER OG HG sing N N 370 SER OXT HXT sing N N 371 THR N CA sing N N 372 THR N H sing N N 373 THR N H2 sing N N 374 THR CA C sing N N 375 THR CA CB sing N N 376 THR CA HA sing N N 377 THR C O doub N N 378 THR C OXT sing N N 379 THR CB OG1 sing N N 380 THR CB CG2 sing N N 381 THR CB HB sing N N 382 THR OG1 HG1 sing N N 383 THR CG2 HG21 sing N N 384 THR CG2 HG22 sing N N 385 THR CG2 HG23 sing N N 386 THR OXT HXT sing N N 387 TRP N CA sing N N 388 TRP N H sing N N 389 TRP N H2 sing N N 390 TRP CA C sing N N 391 TRP CA CB sing N N 392 TRP CA HA sing N N 393 TRP C O doub N N 394 TRP C OXT sing N N 395 TRP CB CG sing N N 396 TRP CB HB2 sing N N 397 TRP CB HB3 sing N N 398 TRP CG CD1 doub Y N 399 TRP CG CD2 sing Y N 400 TRP CD1 NE1 sing Y N 401 TRP CD1 HD1 sing N N 402 TRP CD2 CE2 doub Y N 403 TRP CD2 CE3 sing Y N 404 TRP NE1 CE2 sing Y N 405 TRP NE1 HE1 sing N N 406 TRP CE2 CZ2 sing Y N 407 TRP CE3 CZ3 doub Y N 408 TRP CE3 HE3 sing N N 409 TRP CZ2 CH2 doub Y N 410 TRP CZ2 HZ2 sing N N 411 TRP CZ3 CH2 sing Y N 412 TRP CZ3 HZ3 sing N N 413 TRP CH2 HH2 sing N N 414 TRP OXT HXT sing N N 415 TYR N CA sing N N 416 TYR N H sing N N 417 TYR N H2 sing N N 418 TYR CA C sing N N 419 TYR CA CB sing N N 420 TYR CA HA sing N N 421 TYR C O doub N N 422 TYR C OXT sing N N 423 TYR CB CG sing N N 424 TYR CB HB2 sing N N 425 TYR CB HB3 sing N N 426 TYR CG CD1 doub Y N 427 TYR CG CD2 sing Y N 428 TYR CD1 CE1 sing Y N 429 TYR CD1 HD1 sing N N 430 TYR CD2 CE2 doub Y N 431 TYR CD2 HD2 sing N N 432 TYR CE1 CZ doub Y N 433 TYR CE1 HE1 sing N N 434 TYR CE2 CZ sing Y N 435 TYR CE2 HE2 sing N N 436 TYR CZ OH sing N N 437 TYR OH HH sing N N 438 TYR OXT HXT sing N N 439 VAL N CA sing N N 440 VAL N H sing N N 441 VAL N H2 sing N N 442 VAL CA C sing N N 443 VAL CA CB sing N N 444 VAL CA HA sing N N 445 VAL C O doub N N 446 VAL C OXT sing N N 447 VAL CB CG1 sing N N 448 VAL CB CG2 sing N N 449 VAL CB HB sing N N 450 VAL CG1 HG11 sing N N 451 VAL CG1 HG12 sing N N 452 VAL CG1 HG13 sing N N 453 VAL CG2 HG21 sing N N 454 VAL CG2 HG22 sing N N 455 VAL CG2 HG23 sing N N 456 VAL OXT HXT sing N N 457 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 NAG 1 B NAG 1 A NAG 294 n B 2 NAG 2 B NAG 2 A NAG 295 n B 2 BMA 3 B BMA 3 A BMA 296 n B 2 MAN 4 B MAN 4 A MAN 298 n B 2 MAN 5 B MAN 5 A MAN 297 n B 2 FUC 6 B FUC 6 A FUC 306 n C 3 NAG 1 C NAG 1 A NAG 394 n C 3 NAG 2 C NAG 2 A NAG 395 n C 3 BMA 3 C BMA 3 A BMA 396 n C 3 MAN 4 C MAN 4 A MAN 398 n C 3 FUC 5 C FUC 5 A FUC 311 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BMA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpb BMA 'COMMON NAME' GMML 1.0 b-D-mannopyranose BMA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Manp BMA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man FUC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 LFucpa FUC 'COMMON NAME' GMML 1.0 a-L-fucopyranose FUC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-L-Fucp FUC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Fuc MAN 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpa MAN 'COMMON NAME' GMML 1.0 a-D-mannopyranose MAN 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Manp MAN 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 2 oligosaccharide 3 oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 'DManpa1-3[DManpa1-6]DManpb1-4DGlcpNAcb1-4[LFucpa1-6]DGlcpNAcb1-' 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/4,6,5/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a1221m-1a_1-5]/1-1-2-3-3-4/a4-b1_a6-f1_b4-c1_c3-d1_c6-e1' WURCS PDB2Glycan 1.1.0 3 2 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{[(3+1)][a-D-Manp]{}[(6+1)][a-D-Manp]{}}}[(6+1)][a-L-Fucp]{}}}' LINUCS PDB-CARE ? 4 3 'DManpa1-3DManpb1-4DGlcpNAcb1-4[LFucpa1-6]DGlcpNAcb1-' 'Glycam Condensed Sequence' GMML 1.0 5 3 'WURCS=2.0/4,5,4/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a1221m-1a_1-5]/1-1-2-3-4/a4-b1_a6-e1_b4-c1_c3-d1' WURCS PDB2Glycan 1.1.0 6 3 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{[(3+1)][a-D-Manp]{}}}[(6+1)][a-L-Fucp]{}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 2 2 NAG C1 O1 1 NAG O4 HO4 sing ? 2 2 3 BMA C1 O1 2 NAG O4 HO4 sing ? 3 2 4 MAN C1 O1 3 BMA O3 HO3 sing ? 4 2 5 MAN C1 O1 3 BMA O6 HO6 sing ? 5 2 6 FUC C1 O1 1 NAG O6 HO6 sing ? 6 3 2 NAG C1 O1 1 NAG O4 HO4 sing ? 7 3 3 BMA C1 O1 2 NAG O4 HO4 sing ? 8 3 4 MAN C1 O1 3 BMA O3 HO3 sing ? 9 3 5 FUC C1 O1 1 NAG O6 HO6 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 NAG 1 n 2 NAG 2 n 2 BMA 3 n 2 MAN 4 n 2 MAN 5 n 2 FUC 6 n 3 NAG 1 n 3 NAG 2 n 3 BMA 3 n 3 MAN 4 n 3 FUC 5 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'CADMIUM ION' CD 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3ALP _pdbx_initial_refinement_model.details 'PDB ENTRY 3ALP' #