data_4GQP # _entry.id 4GQP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4GQP pdb_00004gqp 10.2210/pdb4gqp/pdb RCSB RCSB074518 ? ? WWPDB D_1000074518 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-10-02 2 'Structure model' 1 1 2014-02-05 3 'Structure model' 1 2 2018-05-02 4 'Structure model' 1 3 2023-09-13 5 'Structure model' 1 4 2024-10-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' 7 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' diffrn 2 4 'Structure model' chem_comp_atom 3 4 'Structure model' chem_comp_bond 4 4 'Structure model' database_2 5 4 'Structure model' pdbx_initial_refinement_model 6 4 'Structure model' struct_site 7 5 'Structure model' pdbx_entry_details 8 5 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_diffrn.ambient_temp' 2 4 'Structure model' '_database_2.pdbx_DOI' 3 4 'Structure model' '_database_2.pdbx_database_accession' 4 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 4 'Structure model' '_struct_site.pdbx_auth_seq_id' 7 5 'Structure model' '_pdbx_entry_details.has_protein_modification' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4GQP _pdbx_database_status.recvd_initial_deposition_date 2012-08-23 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3GKZ _pdbx_database_related.details 'The wild type of anti-METH scFv' _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Thakkar, S.' 1 'Varughese, K.I.' 2 # _citation.id primary _citation.title 'Affinity improvement of a therapeutic antibody to methamphetamine and amphetamine through structure-based antibody engineering.' _citation.journal_abbrev 'Sci Rep' _citation.journal_volume 4 _citation.page_first 3673 _citation.page_last 3673 _citation.year 2014 _citation.journal_id_ASTM ? _citation.country UK _citation.journal_id_ISSN 2045-2322 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24419156 _citation.pdbx_database_id_DOI 10.1038/srep03673 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Thakkar, S.' 1 ? primary 'Nanaware-Kharade, N.' 2 ? primary 'Celikel, R.' 3 ? primary 'Peterson, E.C.' 4 ? primary 'Varughese, K.I.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Anti-METH scFv' 26806.369 1 ? ? ? ? 2 non-polymer syn '(2S)-N-methyl-1-phenylpropan-2-amine' 149.233 1 ? ? ? ? 3 water nat water 18.015 79 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;EVQLQESGPSLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYL QLKSVSSEDTATYYCTYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIMSASPGEKVTLTCSASSS VSSSHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAASYFCHQWSSFPFTFGSGTKLEIK RAPHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;EVQLQESGPSLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYL QLKSVSSEDTATYYCTYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIMSASPGEKVTLTCSASSS VSSSHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAASYFCHQWSSFPFTFGSGTKLEIK RAPHHHHHH ; _entity_poly.pdbx_strand_id H _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '(2S)-N-methyl-1-phenylpropan-2-amine' B40 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLU n 1 2 VAL n 1 3 GLN n 1 4 LEU n 1 5 GLN n 1 6 GLU n 1 7 SER n 1 8 GLY n 1 9 PRO n 1 10 SER n 1 11 LEU n 1 12 VAL n 1 13 LYS n 1 14 PRO n 1 15 SER n 1 16 GLN n 1 17 THR n 1 18 LEU n 1 19 SER n 1 20 LEU n 1 21 THR n 1 22 CYS n 1 23 SER n 1 24 VAL n 1 25 THR n 1 26 GLY n 1 27 ASP n 1 28 SER n 1 29 VAL n 1 30 THR n 1 31 SER n 1 32 GLY n 1 33 TYR n 1 34 TRP n 1 35 SER n 1 36 TRP n 1 37 ILE n 1 38 ARG n 1 39 GLN n 1 40 PHE n 1 41 PRO n 1 42 GLY n 1 43 ASN n 1 44 LYS n 1 45 LEU n 1 46 ASP n 1 47 TYR n 1 48 MET n 1 49 GLY n 1 50 TYR n 1 51 ILE n 1 52 SER n 1 53 TYR n 1 54 ARG n 1 55 GLY n 1 56 SER n 1 57 THR n 1 58 TYR n 1 59 TYR n 1 60 ASN n 1 61 PRO n 1 62 SER n 1 63 LEU n 1 64 LYS n 1 65 SER n 1 66 ARG n 1 67 ILE n 1 68 SER n 1 69 ILE n 1 70 THR n 1 71 ARG n 1 72 ASP n 1 73 THR n 1 74 SER n 1 75 LYS n 1 76 ASN n 1 77 GLN n 1 78 VAL n 1 79 TYR n 1 80 LEU n 1 81 GLN n 1 82 LEU n 1 83 LYS n 1 84 SER n 1 85 VAL n 1 86 SER n 1 87 SER n 1 88 GLU n 1 89 ASP n 1 90 THR n 1 91 ALA n 1 92 THR n 1 93 TYR n 1 94 TYR n 1 95 CYS n 1 96 THR n 1 97 TYR n 1 98 PHE n 1 99 ASP n 1 100 SER n 1 101 ASP n 1 102 ASP n 1 103 TYR n 1 104 ALA n 1 105 MET n 1 106 GLU n 1 107 TYR n 1 108 TRP n 1 109 GLY n 1 110 GLN n 1 111 GLY n 1 112 THR n 1 113 SER n 1 114 VAL n 1 115 THR n 1 116 VAL n 1 117 SER n 1 118 GLY n 1 119 GLY n 1 120 GLY n 1 121 GLY n 1 122 SER n 1 123 GLY n 1 124 GLY n 1 125 GLY n 1 126 GLY n 1 127 SER n 1 128 GLY n 1 129 GLY n 1 130 GLY n 1 131 GLY n 1 132 SER n 1 133 GLN n 1 134 ILE n 1 135 VAL n 1 136 LEU n 1 137 THR n 1 138 GLN n 1 139 SER n 1 140 PRO n 1 141 ALA n 1 142 ILE n 1 143 MET n 1 144 SER n 1 145 ALA n 1 146 SER n 1 147 PRO n 1 148 GLY n 1 149 GLU n 1 150 LYS n 1 151 VAL n 1 152 THR n 1 153 LEU n 1 154 THR n 1 155 CYS n 1 156 SER n 1 157 ALA n 1 158 SER n 1 159 SER n 1 160 SER n 1 161 VAL n 1 162 SER n 1 163 SER n 1 164 SER n 1 165 HIS n 1 166 LEU n 1 167 TYR n 1 168 TRP n 1 169 TYR n 1 170 GLN n 1 171 GLN n 1 172 LYS n 1 173 PRO n 1 174 GLY n 1 175 SER n 1 176 SER n 1 177 PRO n 1 178 LYS n 1 179 LEU n 1 180 TRP n 1 181 ILE n 1 182 TYR n 1 183 SER n 1 184 THR n 1 185 SER n 1 186 ASN n 1 187 LEU n 1 188 ALA n 1 189 SER n 1 190 GLY n 1 191 VAL n 1 192 PRO n 1 193 ALA n 1 194 ARG n 1 195 PHE n 1 196 SER n 1 197 GLY n 1 198 SER n 1 199 GLY n 1 200 SER n 1 201 GLY n 1 202 THR n 1 203 SER n 1 204 TYR n 1 205 SER n 1 206 LEU n 1 207 THR n 1 208 ILE n 1 209 SER n 1 210 SER n 1 211 MET n 1 212 GLU n 1 213 ALA n 1 214 GLU n 1 215 ASP n 1 216 ALA n 1 217 ALA n 1 218 SER n 1 219 TYR n 1 220 PHE n 1 221 CYS n 1 222 HIS n 1 223 GLN n 1 224 TRP n 1 225 SER n 1 226 SER n 1 227 PHE n 1 228 PRO n 1 229 PHE n 1 230 THR n 1 231 PHE n 1 232 GLY n 1 233 SER n 1 234 GLY n 1 235 THR n 1 236 LYS n 1 237 LEU n 1 238 GLU n 1 239 ILE n 1 240 LYS n 1 241 ARG n 1 242 ALA n 1 243 PRO n 1 244 HIS n 1 245 HIS n 1 246 HIS n 1 247 HIS n 1 248 HIS n 1 249 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details 'both heavy and light chains are attached to each other by a polypeptide linker' _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Pichia pastoris' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 4919 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain X33 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'pPICZ alpha' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 B40 non-polymer . '(2S)-N-methyl-1-phenylpropan-2-amine' Methamphetamine 'C10 H15 N' 149.233 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLU 1 1 1 GLU GLU H . n A 1 2 VAL 2 2 2 VAL VAL H . n A 1 3 GLN 3 3 3 GLN GLN H . n A 1 4 LEU 4 4 4 LEU LEU H . n A 1 5 GLN 5 5 5 GLN GLN H . n A 1 6 GLU 6 6 6 GLU GLU H . n A 1 7 SER 7 7 7 SER SER H . n A 1 8 GLY 8 8 8 GLY GLY H . n A 1 9 PRO 9 9 9 PRO PRO H . n A 1 10 SER 10 10 10 SER SER H . n A 1 11 LEU 11 11 11 LEU LEU H . n A 1 12 VAL 12 12 12 VAL VAL H . n A 1 13 LYS 13 13 13 LYS LYS H . n A 1 14 PRO 14 14 14 PRO PRO H . n A 1 15 SER 15 15 15 SER SER H . n A 1 16 GLN 16 16 16 GLN GLN H . n A 1 17 THR 17 17 17 THR THR H . n A 1 18 LEU 18 18 18 LEU LEU H . n A 1 19 SER 19 19 19 SER SER H . n A 1 20 LEU 20 20 20 LEU LEU H . n A 1 21 THR 21 21 21 THR THR H . n A 1 22 CYS 22 22 22 CYS CYS H . n A 1 23 SER 23 23 23 SER SER H . n A 1 24 VAL 24 24 24 VAL VAL H . n A 1 25 THR 25 25 25 THR THR H . n A 1 26 GLY 26 26 26 GLY GLY H . n A 1 27 ASP 27 27 27 ASP ASP H . n A 1 28 SER 28 28 28 SER SER H . n A 1 29 VAL 29 29 29 VAL VAL H . n A 1 30 THR 30 30 30 THR THR H . n A 1 31 SER 31 31 31 SER SER H . n A 1 32 GLY 32 32 32 GLY GLY H . n A 1 33 TYR 33 33 33 TYR TYR H . n A 1 34 TRP 34 34 34 TRP TRP H . n A 1 35 SER 35 35 35 SER SER H . n A 1 36 TRP 36 36 36 TRP TRP H . n A 1 37 ILE 37 37 37 ILE ILE H . n A 1 38 ARG 38 38 38 ARG ARG H . n A 1 39 GLN 39 39 39 GLN GLN H . n A 1 40 PHE 40 40 40 PHE PHE H . n A 1 41 PRO 41 41 41 PRO PRO H . n A 1 42 GLY 42 42 42 GLY GLY H . n A 1 43 ASN 43 43 43 ASN ASN H . n A 1 44 LYS 44 44 44 LYS LYS H . n A 1 45 LEU 45 45 45 LEU LEU H . n A 1 46 ASP 46 46 46 ASP ASP H . n A 1 47 TYR 47 47 47 TYR TYR H . n A 1 48 MET 48 48 48 MET MET H . n A 1 49 GLY 49 49 49 GLY GLY H . n A 1 50 TYR 50 50 50 TYR TYR H . n A 1 51 ILE 51 51 51 ILE ILE H . n A 1 52 SER 52 52 52 SER SER H . n A 1 53 TYR 53 53 53 TYR TYR H . n A 1 54 ARG 54 54 54 ARG ARG H . n A 1 55 GLY 55 55 55 GLY GLY H . n A 1 56 SER 56 56 56 SER SER H . n A 1 57 THR 57 57 57 THR THR H . n A 1 58 TYR 58 58 58 TYR TYR H . n A 1 59 TYR 59 59 59 TYR TYR H . n A 1 60 ASN 60 60 60 ASN ASN H . n A 1 61 PRO 61 61 61 PRO PRO H . n A 1 62 SER 62 62 62 SER SER H . n A 1 63 LEU 63 63 63 LEU LEU H . n A 1 64 LYS 64 64 64 LYS LYS H . n A 1 65 SER 65 65 65 SER SER H . n A 1 66 ARG 66 66 66 ARG ARG H . n A 1 67 ILE 67 67 67 ILE ILE H . n A 1 68 SER 68 68 68 SER SER H . n A 1 69 ILE 69 69 69 ILE ILE H . n A 1 70 THR 70 70 70 THR THR H . n A 1 71 ARG 71 71 71 ARG ARG H . n A 1 72 ASP 72 72 72 ASP ASP H . n A 1 73 THR 73 73 73 THR THR H . n A 1 74 SER 74 74 74 SER SER H . n A 1 75 LYS 75 75 75 LYS LYS H . n A 1 76 ASN 76 76 76 ASN ASN H . n A 1 77 GLN 77 77 77 GLN GLN H . n A 1 78 VAL 78 78 78 VAL VAL H . n A 1 79 TYR 79 79 79 TYR TYR H . n A 1 80 LEU 80 80 80 LEU LEU H . n A 1 81 GLN 81 81 81 GLN GLN H . n A 1 82 LEU 82 82 82 LEU LEU H . n A 1 83 LYS 83 82 82 LYS LYS H A n A 1 84 SER 84 82 82 SER SER H B n A 1 85 VAL 85 82 82 VAL VAL H C n A 1 86 SER 86 83 83 SER SER H . n A 1 87 SER 87 84 84 SER SER H . n A 1 88 GLU 88 85 85 GLU GLU H . n A 1 89 ASP 89 86 86 ASP ASP H . n A 1 90 THR 90 87 87 THR THR H . n A 1 91 ALA 91 88 88 ALA ALA H . n A 1 92 THR 92 89 89 THR THR H . n A 1 93 TYR 93 90 90 TYR TYR H . n A 1 94 TYR 94 91 91 TYR TYR H . n A 1 95 CYS 95 92 92 CYS CYS H . n A 1 96 THR 96 93 93 THR THR H . n A 1 97 TYR 97 94 94 TYR TYR H . n A 1 98 PHE 98 95 95 PHE PHE H . n A 1 99 ASP 99 96 96 ASP ASP H . n A 1 100 SER 100 97 97 SER SER H . n A 1 101 ASP 101 98 98 ASP ASP H . n A 1 102 ASP 102 99 99 ASP ASP H . n A 1 103 TYR 103 100 100 TYR TYR H A n A 1 104 ALA 104 100 100 ALA ALA H B n A 1 105 MET 105 100 100 MET MET H C n A 1 106 GLU 106 101 101 GLU GLU H . n A 1 107 TYR 107 102 102 TYR TYR H . n A 1 108 TRP 108 103 103 TRP TRP H . n A 1 109 GLY 109 104 104 GLY GLY H . n A 1 110 GLN 110 105 105 GLN GLN H . n A 1 111 GLY 111 106 106 GLY GLY H . n A 1 112 THR 112 107 107 THR THR H . n A 1 113 SER 113 108 108 SER SER H . n A 1 114 VAL 114 109 109 VAL VAL H . n A 1 115 THR 115 110 110 THR THR H . n A 1 116 VAL 116 111 111 VAL VAL H . n A 1 117 SER 117 112 112 SER SER H . n A 1 118 GLY 118 992 ? ? ? H . n A 1 119 GLY 119 993 ? ? ? H . n A 1 120 GLY 120 994 ? ? ? H . n A 1 121 GLY 121 995 ? ? ? H . n A 1 122 SER 122 996 ? ? ? H . n A 1 123 GLY 123 997 ? ? ? H . n A 1 124 GLY 124 998 ? ? ? H . n A 1 125 GLY 125 999 ? ? ? H . n A 1 126 GLY 126 1000 ? ? ? H . n A 1 127 SER 127 1001 ? ? ? H F n A 1 128 GLY 128 1001 ? ? ? H E n A 1 129 GLY 129 1001 1001 GLY GLY H D n A 1 130 GLY 130 1001 1001 GLY GLY H C n A 1 131 GLY 131 1001 1001 GLY GLY H B n A 1 132 SER 132 1001 1001 SER SER H A n A 1 133 GLN 133 1001 1001 GLN GLN H . n A 1 134 ILE 134 1002 1002 ILE ILE H . n A 1 135 VAL 135 1003 1003 VAL VAL H . n A 1 136 LEU 136 1004 1004 LEU LEU H . n A 1 137 THR 137 1005 1005 THR THR H . n A 1 138 GLN 138 1006 1006 GLN GLN H . n A 1 139 SER 139 1007 1007 SER SER H . n A 1 140 PRO 140 1008 1008 PRO PRO H . n A 1 141 ALA 141 1009 1009 ALA ALA H . n A 1 142 ILE 142 1010 1010 ILE ILE H . n A 1 143 MET 143 1011 1011 MET MET H . n A 1 144 SER 144 1012 1012 SER SER H . n A 1 145 ALA 145 1013 1013 ALA ALA H . n A 1 146 SER 146 1014 1014 SER SER H . n A 1 147 PRO 147 1015 1015 PRO PRO H . n A 1 148 GLY 148 1016 1016 GLY GLY H . n A 1 149 GLU 149 1017 1017 GLU GLU H . n A 1 150 LYS 150 1018 1018 LYS LYS H . n A 1 151 VAL 151 1019 1019 VAL VAL H . n A 1 152 THR 152 1020 1020 THR THR H . n A 1 153 LEU 153 1021 1021 LEU LEU H . n A 1 154 THR 154 1022 1022 THR THR H . n A 1 155 CYS 155 1023 1023 CYS CYS H . n A 1 156 SER 156 1024 1024 SER SER H . n A 1 157 ALA 157 1025 1025 ALA ALA H . n A 1 158 SER 158 1026 1026 SER SER H . n A 1 159 SER 159 1027 1027 SER SER H . n A 1 160 SER 160 1027 1027 SER SER H A n A 1 161 VAL 161 1028 1028 VAL VAL H . n A 1 162 SER 162 1029 1029 SER SER H . n A 1 163 SER 163 1030 1030 SER SER H . n A 1 164 SER 164 1031 1031 SER SER H . n A 1 165 HIS 165 1032 1032 HIS HIS H . n A 1 166 LEU 166 1033 1033 LEU LEU H . n A 1 167 TYR 167 1034 1034 TYR TYR H . n A 1 168 TRP 168 1035 1035 TRP TRP H . n A 1 169 TYR 169 1036 1036 TYR TYR H . n A 1 170 GLN 170 1037 1037 GLN GLN H . n A 1 171 GLN 171 1038 1038 GLN GLN H . n A 1 172 LYS 172 1039 1039 LYS LYS H . n A 1 173 PRO 173 1040 1040 PRO PRO H . n A 1 174 GLY 174 1041 1041 GLY GLY H . n A 1 175 SER 175 1042 1042 SER SER H . n A 1 176 SER 176 1043 1043 SER SER H . n A 1 177 PRO 177 1044 1044 PRO PRO H . n A 1 178 LYS 178 1045 1045 LYS LYS H . n A 1 179 LEU 179 1046 1046 LEU LEU H . n A 1 180 TRP 180 1047 1047 TRP TRP H . n A 1 181 ILE 181 1048 1048 ILE ILE H . n A 1 182 TYR 182 1049 1049 TYR TYR H . n A 1 183 SER 183 1050 1050 SER SER H . n A 1 184 THR 184 1051 1051 THR THR H . n A 1 185 SER 185 1052 1052 SER SER H . n A 1 186 ASN 186 1053 1053 ASN ASN H . n A 1 187 LEU 187 1054 1054 LEU LEU H . n A 1 188 ALA 188 1055 1055 ALA ALA H . n A 1 189 SER 189 1056 1056 SER SER H . n A 1 190 GLY 190 1057 1057 GLY GLY H . n A 1 191 VAL 191 1058 1058 VAL VAL H . n A 1 192 PRO 192 1059 1059 PRO PRO H . n A 1 193 ALA 193 1060 1060 ALA ALA H . n A 1 194 ARG 194 1061 1061 ARG ARG H . n A 1 195 PHE 195 1062 1062 PHE PHE H . n A 1 196 SER 196 1063 1063 SER SER H . n A 1 197 GLY 197 1064 1064 GLY GLY H . n A 1 198 SER 198 1065 1065 SER SER H . n A 1 199 GLY 199 1066 1066 GLY GLY H . n A 1 200 SER 200 1067 1067 SER SER H . n A 1 201 GLY 201 1068 1068 GLY GLY H . n A 1 202 THR 202 1069 1069 THR THR H . n A 1 203 SER 203 1070 1070 SER SER H . n A 1 204 TYR 204 1071 1071 TYR TYR H . n A 1 205 SER 205 1072 1072 SER SER H . n A 1 206 LEU 206 1073 1073 LEU LEU H . n A 1 207 THR 207 1074 1074 THR THR H . n A 1 208 ILE 208 1075 1075 ILE ILE H . n A 1 209 SER 209 1076 1076 SER SER H . n A 1 210 SER 210 1077 1077 SER SER H . n A 1 211 MET 211 1078 1078 MET MET H . n A 1 212 GLU 212 1079 1079 GLU GLU H . n A 1 213 ALA 213 1080 1080 ALA ALA H . n A 1 214 GLU 214 1081 1081 GLU GLU H . n A 1 215 ASP 215 1082 1082 ASP ASP H . n A 1 216 ALA 216 1083 1083 ALA ALA H . n A 1 217 ALA 217 1084 1084 ALA ALA H . n A 1 218 SER 218 1085 1085 SER SER H . n A 1 219 TYR 219 1086 1086 TYR TYR H . n A 1 220 PHE 220 1087 1087 PHE PHE H . n A 1 221 CYS 221 1088 1088 CYS CYS H . n A 1 222 HIS 222 1089 1089 HIS HIS H . n A 1 223 GLN 223 1090 1090 GLN GLN H . n A 1 224 TRP 224 1091 1091 TRP TRP H . n A 1 225 SER 225 1092 1092 SER SER H . n A 1 226 SER 226 1093 1093 SER SER H . n A 1 227 PHE 227 1094 1094 PHE PHE H . n A 1 228 PRO 228 1095 1095 PRO PRO H . n A 1 229 PHE 229 1096 1096 PHE PHE H . n A 1 230 THR 230 1097 1097 THR THR H . n A 1 231 PHE 231 1098 1098 PHE PHE H . n A 1 232 GLY 232 1099 1099 GLY GLY H . n A 1 233 SER 233 1100 1100 SER SER H . n A 1 234 GLY 234 1101 1101 GLY GLY H . n A 1 235 THR 235 1102 1102 THR THR H . n A 1 236 LYS 236 1103 1103 LYS LYS H . n A 1 237 LEU 237 1104 1104 LEU LEU H . n A 1 238 GLU 238 1105 1105 GLU GLU H . n A 1 239 ILE 239 1106 1106 ILE ILE H . n A 1 240 LYS 240 1106 1106 LYS LYS H A n A 1 241 ARG 241 1107 ? ? ? H . n A 1 242 ALA 242 1108 ? ? ? H . n A 1 243 PRO 243 1109 ? ? ? H . n A 1 244 HIS 244 1110 ? ? ? H . n A 1 245 HIS 245 1111 ? ? ? H . n A 1 246 HIS 246 1112 ? ? ? H . n A 1 247 HIS 247 1113 ? ? ? H . n A 1 248 HIS 248 1114 ? ? ? H . n A 1 249 HIS 249 1115 ? ? ? H . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 B40 1 1201 1201 B40 B40 H . C 3 HOH 1 1301 1301 HOH HOH H . C 3 HOH 2 1302 1302 HOH HOH H . C 3 HOH 3 1303 1303 HOH HOH H . C 3 HOH 4 1304 1304 HOH HOH H . C 3 HOH 5 1305 1305 HOH HOH H . C 3 HOH 6 1306 1306 HOH HOH H . C 3 HOH 7 1307 1307 HOH HOH H . C 3 HOH 8 1308 1308 HOH HOH H . C 3 HOH 9 1309 1309 HOH HOH H . C 3 HOH 10 1310 1310 HOH HOH H . C 3 HOH 11 1311 1311 HOH HOH H . C 3 HOH 12 1312 1312 HOH HOH H . C 3 HOH 13 1313 1313 HOH HOH H . C 3 HOH 14 1314 1314 HOH HOH H . C 3 HOH 15 1315 1315 HOH HOH H . C 3 HOH 16 1316 1316 HOH HOH H . C 3 HOH 17 1317 1317 HOH HOH H . C 3 HOH 18 1318 1318 HOH HOH H . C 3 HOH 19 1319 1319 HOH HOH H . C 3 HOH 20 1320 1320 HOH HOH H . C 3 HOH 21 1321 1321 HOH HOH H . C 3 HOH 22 1322 1322 HOH HOH H . C 3 HOH 23 1323 1323 HOH HOH H . C 3 HOH 24 1324 1324 HOH HOH H . C 3 HOH 25 1325 1325 HOH HOH H . C 3 HOH 26 1326 1326 HOH HOH H . C 3 HOH 27 1327 1327 HOH HOH H . C 3 HOH 28 1328 1328 HOH HOH H . C 3 HOH 29 1329 1329 HOH HOH H . C 3 HOH 30 1330 1330 HOH HOH H . C 3 HOH 31 1331 1331 HOH HOH H . C 3 HOH 32 1332 1332 HOH HOH H . C 3 HOH 33 1333 1333 HOH HOH H . C 3 HOH 34 1334 1334 HOH HOH H . C 3 HOH 35 1335 1335 HOH HOH H . C 3 HOH 36 1336 1336 HOH HOH H . C 3 HOH 37 1337 1337 HOH HOH H . C 3 HOH 38 1338 1338 HOH HOH H . C 3 HOH 39 1339 1339 HOH HOH H . C 3 HOH 40 1340 1340 HOH HOH H . C 3 HOH 41 1341 1341 HOH HOH H . C 3 HOH 42 1342 1342 HOH HOH H . C 3 HOH 43 1343 1343 HOH HOH H . C 3 HOH 44 1344 1344 HOH HOH H . C 3 HOH 45 1345 1345 HOH HOH H . C 3 HOH 46 1346 1346 HOH HOH H . C 3 HOH 47 1347 1347 HOH HOH H . C 3 HOH 48 1348 1348 HOH HOH H . C 3 HOH 49 1349 1349 HOH HOH H . C 3 HOH 50 1350 1350 HOH HOH H . C 3 HOH 51 1351 1351 HOH HOH H . C 3 HOH 52 1352 1352 HOH HOH H . C 3 HOH 53 1353 1353 HOH HOH H . C 3 HOH 54 1354 1354 HOH HOH H . C 3 HOH 55 1355 1355 HOH HOH H . C 3 HOH 56 1356 1356 HOH HOH H . C 3 HOH 57 1357 1357 HOH HOH H . C 3 HOH 58 1358 1358 HOH HOH H . C 3 HOH 59 1359 1359 HOH HOH H . C 3 HOH 60 1360 1360 HOH HOH H . C 3 HOH 61 1361 1361 HOH HOH H . C 3 HOH 62 1362 1362 HOH HOH H . C 3 HOH 63 1363 1363 HOH HOH H . C 3 HOH 64 1364 1364 HOH HOH H . C 3 HOH 65 1365 1365 HOH HOH H . C 3 HOH 66 1366 1366 HOH HOH H . C 3 HOH 67 1367 1367 HOH HOH H . C 3 HOH 68 1368 1369 HOH HOH H . C 3 HOH 69 1369 1370 HOH HOH H . C 3 HOH 70 1370 1372 HOH HOH H . C 3 HOH 71 1371 1373 HOH HOH H . C 3 HOH 72 1372 1374 HOH HOH H . C 3 HOH 73 1373 1375 HOH HOH H . C 3 HOH 74 1374 1378 HOH HOH H . C 3 HOH 75 1375 1379 HOH HOH H . C 3 HOH 76 1376 1380 HOH HOH H . C 3 HOH 77 1377 1381 HOH HOH H . C 3 HOH 78 1378 1382 HOH HOH H . C 3 HOH 79 1379 1383 HOH HOH H . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal _software.date _software.type _software.location _software.language HKL-2000 'data collection' . ? 1 ? ? ? ? CCP4 'model building' . ? 2 ? ? ? ? REFMAC refinement 5.5.0109 ? 3 ? ? ? ? Coot 'model building' . ? 4 ? ? ? ? HKL-2000 'data reduction' . ? 5 ? ? ? ? HKL-2000 'data scaling' . ? 6 ? ? ? ? CCP4 phasing . ? 7 ? ? ? ? # _cell.entry_id 4GQP _cell.length_a 34.516 _cell.length_b 65.265 _cell.length_c 48.483 _cell.angle_alpha 90.00 _cell.angle_beta 98.20 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4GQP _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # _exptl.entry_id 4GQP _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.02 _exptl_crystal.density_percent_sol 39.00 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 287.15 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.25 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.917 M sodium citrate, pH 8.2, 0.324 M imidazole-malate, pH 8.3, VAPOR DIFFUSION, HANGING DROP, temperature 287.15K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.pdbx_collection_date 2012-04-25 _diffrn_detector.details 'Rh coated flat mirrors' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'double crystal' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97946 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRL BEAMLINE BL9-2' _diffrn_source.pdbx_synchrotron_site SSRL _diffrn_source.pdbx_synchrotron_beamline BL9-2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97946 # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4GQP _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.00 _reflns.d_resolution_high 2.0 _reflns.number_obs 14299 _reflns.number_all 14299 _reflns.percent_possible_obs 99.2 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.087 _reflns.pdbx_netI_over_sigmaI 34.2 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.0 _reflns_shell.d_res_low 2.03 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.33 _reflns_shell.meanI_over_sigI_obs 8.1 _reflns_shell.pdbx_redundancy 5.1 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4GQP _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 13554 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 38.66 _refine.ls_d_res_high 2.00 _refine.ls_percent_reflns_obs 99.03 _refine.ls_R_factor_obs 0.19669 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.19369 _refine.ls_R_factor_R_free 0.25361 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 719 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.947 _refine.correlation_coeff_Fo_to_Fc_free 0.916 _refine.B_iso_mean 27.454 _refine.aniso_B[1][1] 0.06 _refine.aniso_B[2][2] 0.00 _refine.aniso_B[3][3] -0.06 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] -0.01 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB ENTRY 3GKZ' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.218 _refine.pdbx_overall_ESU_R_Free 0.192 _refine.overall_SU_ML 0.129 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 10.145 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1756 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 11 _refine_hist.number_atoms_solvent 79 _refine_hist.number_atoms_total 1846 _refine_hist.d_res_high 2.00 _refine_hist.d_res_low 38.66 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.023 0.022 ? 1812 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.987 1.951 ? 2440 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 7.461 5.000 ? 216 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 35.737 23.913 ? 69 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 16.957 15.000 ? 283 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 21.744 15.000 ? 5 'X-RAY DIFFRACTION' ? r_chiral_restr 0.135 0.200 ? 268 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.010 0.021 ? 1321 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.210 1.500 ? 1134 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2.039 2.000 ? 1809 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 3.148 3.000 ? 678 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 4.360 4.500 ? 631 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.003 _refine_ls_shell.d_res_low 2.055 _refine_ls_shell.number_reflns_R_work 997 _refine_ls_shell.R_factor_R_work 0.196 _refine_ls_shell.percent_reflns_obs 99.15 _refine_ls_shell.R_factor_R_free 0.245 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 58 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _database_PDB_matrix.entry_id 4GQP _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4GQP _struct.title 'Structure based design of sub-nanomolar affinity anti-methamphetamine single chain antibodies.' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4GQP _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' _struct_keywords.text ;Antibody METH complex, Immunoglobulin fold, anti-METH single chain antibody, free METH concentration, Methamphetamine, vasculature, IMMUNE SYSTEM ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 4GQP _struct_ref.pdbx_db_accession 4GQP _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4GQP _struct_ref_seq.pdbx_strand_id H _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 249 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 4GQP _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 1115 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 1115 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 73 ? LYS A 75 ? THR H 73 LYS H 75 5 ? 3 HELX_P HELX_P2 2 SER A 86 ? THR A 90 ? SER H 83 THR H 87 5 ? 5 HELX_P HELX_P3 3 SER A 162 ? SER A 164 ? SER H 1029 SER H 1031 5 ? 3 HELX_P HELX_P4 4 GLU A 212 ? ALA A 216 ? GLU H 1079 ALA H 1083 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 22 SG ? ? ? 1_555 A CYS 95 SG ? ? H CYS 22 H CYS 92 1_555 ? ? ? ? ? ? ? 2.097 ? ? disulf2 disulf ? ? A CYS 155 SG ? ? ? 1_555 A CYS 221 SG ? ? H CYS 1023 H CYS 1088 1_555 ? ? ? ? ? ? ? 2.147 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 CYS A 22 ? CYS A 95 ? CYS H 22 ? 1_555 CYS H 92 ? 1_555 SG SG . . . None 'Disulfide bridge' 2 CYS A 155 ? CYS A 221 ? CYS H 1023 ? 1_555 CYS H 1088 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 SER 139 A . ? SER 1007 H PRO 140 A ? PRO 1008 H 1 -0.70 2 PHE 227 A . ? PHE 1094 H PRO 228 A ? PRO 1095 H 1 -3.39 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 6 ? C ? 4 ? D ? 4 ? E ? 6 ? F ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel C 1 2 ? parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel E 1 2 ? parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel E 4 5 ? anti-parallel E 5 6 ? anti-parallel F 1 2 ? parallel F 2 3 ? anti-parallel F 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 2 ? SER A 7 ? VAL H 2 SER H 7 A 2 LEU A 18 ? GLY A 26 ? LEU H 18 GLY H 26 A 3 GLN A 77 ? LEU A 82 ? GLN H 77 LEU H 82 A 4 ILE A 67 ? ASP A 72 ? ILE H 67 ASP H 72 B 1 LEU A 11 ? VAL A 12 ? LEU H 11 VAL H 12 B 2 THR A 112 ? VAL A 116 ? THR H 107 VAL H 111 B 3 ALA A 91 ? PHE A 98 ? ALA H 88 PHE H 95 B 4 TYR A 33 ? GLN A 39 ? TYR H 33 GLN H 39 B 5 LEU A 45 ? SER A 52 ? LEU H 45 SER H 52 B 6 THR A 57 ? TYR A 59 ? THR H 57 TYR H 59 C 1 LEU A 11 ? VAL A 12 ? LEU H 11 VAL H 12 C 2 THR A 112 ? VAL A 116 ? THR H 107 VAL H 111 C 3 ALA A 91 ? PHE A 98 ? ALA H 88 PHE H 95 C 4 GLU A 106 ? TRP A 108 ? GLU H 101 TRP H 103 D 1 LEU A 136 ? THR A 137 ? LEU H 1004 THR H 1005 D 2 VAL A 151 ? ALA A 157 ? VAL H 1019 ALA H 1025 D 3 SER A 203 ? ILE A 208 ? SER H 1070 ILE H 1075 D 4 PHE A 195 ? SER A 200 ? PHE H 1062 SER H 1067 E 1 ILE A 142 ? ALA A 145 ? ILE H 1010 ALA H 1013 E 2 THR A 235 ? ILE A 239 ? THR H 1102 ILE H 1106 E 3 ALA A 217 ? GLN A 223 ? ALA H 1084 GLN H 1090 E 4 LEU A 166 ? GLN A 171 ? LEU H 1033 GLN H 1038 E 5 LYS A 178 ? TYR A 182 ? LYS H 1045 TYR H 1049 E 6 ASN A 186 ? LEU A 187 ? ASN H 1053 LEU H 1054 F 1 ILE A 142 ? ALA A 145 ? ILE H 1010 ALA H 1013 F 2 THR A 235 ? ILE A 239 ? THR H 1102 ILE H 1106 F 3 ALA A 217 ? GLN A 223 ? ALA H 1084 GLN H 1090 F 4 THR A 230 ? PHE A 231 ? THR H 1097 PHE H 1098 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLN A 3 ? N GLN H 3 O THR A 25 ? O THR H 25 A 2 3 N CYS A 22 ? N CYS H 22 O VAL A 78 ? O VAL H 78 A 3 4 O TYR A 79 ? O TYR H 79 N THR A 70 ? N THR H 70 B 1 2 N VAL A 12 ? N VAL H 12 O THR A 115 ? O THR H 110 B 2 3 O THR A 112 ? O THR H 107 N TYR A 93 ? N TYR H 90 B 3 4 O THR A 92 ? O THR H 89 N GLN A 39 ? N GLN H 39 B 4 5 N TRP A 34 ? N TRP H 34 O ILE A 51 ? O ILE H 51 B 5 6 N TYR A 50 ? N TYR H 50 O TYR A 58 ? O TYR H 58 C 1 2 N VAL A 12 ? N VAL H 12 O THR A 115 ? O THR H 110 C 2 3 O THR A 112 ? O THR H 107 N TYR A 93 ? N TYR H 90 C 3 4 N TYR A 97 ? N TYR H 94 O TYR A 107 ? O TYR H 102 D 1 2 N THR A 137 ? N THR H 1005 O SER A 156 ? O SER H 1024 D 2 3 N LEU A 153 ? N LEU H 1021 O LEU A 206 ? O LEU H 1073 D 3 4 O SER A 205 ? O SER H 1072 N SER A 198 ? N SER H 1065 E 1 2 N MET A 143 ? N MET H 1011 O GLU A 238 ? O GLU H 1105 E 2 3 O LEU A 237 ? O LEU H 1104 N ALA A 217 ? N ALA H 1084 E 3 4 O HIS A 222 ? O HIS H 1089 N TYR A 167 ? N TYR H 1034 E 4 5 N TRP A 168 ? N TRP H 1035 O TRP A 180 ? O TRP H 1047 E 5 6 N TYR A 182 ? N TYR H 1049 O ASN A 186 ? O ASN H 1053 F 1 2 N MET A 143 ? N MET H 1011 O GLU A 238 ? O GLU H 1105 F 2 3 O LEU A 237 ? O LEU H 1104 N ALA A 217 ? N ALA H 1084 F 3 4 N GLN A 223 ? N GLN H 1090 O THR A 230 ? O THR H 1097 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id H _struct_site.pdbx_auth_comp_id B40 _struct_site.pdbx_auth_seq_id 1201 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 10 _struct_site.details 'BINDING SITE FOR RESIDUE B40 H 1201' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 10 TYR A 33 ? TYR H 33 . ? 1_555 ? 2 AC1 10 SER A 35 ? SER H 35 . ? 1_555 ? 3 AC1 10 TYR A 47 ? TYR H 47 . ? 1_555 ? 4 AC1 10 TYR A 50 ? TYR H 50 . ? 1_555 ? 5 AC1 10 PHE A 98 ? PHE H 95 . ? 1_555 ? 6 AC1 10 GLU A 106 ? GLU H 101 . ? 1_555 ? 7 AC1 10 TYR A 167 ? TYR H 1034 . ? 1_555 ? 8 AC1 10 TYR A 169 ? TYR H 1036 . ? 1_555 ? 9 AC1 10 HIS A 222 ? HIS H 1089 . ? 1_555 ? 10 AC1 10 TRP A 224 ? TRP H 1091 . ? 1_555 ? # _pdbx_entry_details.entry_id 4GQP _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE SEQUENCE NUMBERS FOR THIS ENTRY FOLLOW THE KABAT NUMBERING SCHEME. NUMBERING 1-112 CORRESPONDS TO THE HEAVY CHAIN AND 1001-1112 TO THE LIGHT CHAIN. ; _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 C H LYS 82 A ? N H SER 82 B ? 1.554 1.336 0.218 0.023 Y 2 1 C H SER 82 B ? N H VAL 82 C ? 1.623 1.336 0.287 0.023 Y 3 1 CB H CYS 92 ? ? SG H CYS 92 ? ? 1.691 1.812 -0.121 0.016 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 O H LYS 82 A ? C H LYS 82 A ? N H SER 82 B ? 112.30 122.70 -10.40 1.60 Y 2 1 O H ILE 1106 ? ? C H ILE 1106 ? ? N H LYS 1106 A ? 110.03 122.70 -12.67 1.60 Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER H 15 ? ? 66.63 -6.48 2 1 SER H 31 ? ? -173.62 -175.48 3 1 ASN H 43 ? ? 94.22 6.51 4 1 SER H 65 ? ? 79.03 -15.58 5 1 THR H 1051 ? ? 70.75 -44.90 6 1 GLU H 1081 ? ? -59.68 -7.42 7 1 ALA H 1084 ? ? 176.96 174.39 # _pdbx_validate_polymer_linkage.id 1 _pdbx_validate_polymer_linkage.PDB_model_num 1 _pdbx_validate_polymer_linkage.auth_atom_id_1 C _pdbx_validate_polymer_linkage.auth_asym_id_1 H _pdbx_validate_polymer_linkage.auth_comp_id_1 SER _pdbx_validate_polymer_linkage.auth_seq_id_1 82 _pdbx_validate_polymer_linkage.PDB_ins_code_1 B _pdbx_validate_polymer_linkage.label_alt_id_1 ? _pdbx_validate_polymer_linkage.auth_atom_id_2 N _pdbx_validate_polymer_linkage.auth_asym_id_2 H _pdbx_validate_polymer_linkage.auth_comp_id_2 VAL _pdbx_validate_polymer_linkage.auth_seq_id_2 82 _pdbx_validate_polymer_linkage.PDB_ins_code_2 C _pdbx_validate_polymer_linkage.label_alt_id_2 ? _pdbx_validate_polymer_linkage.dist 1.62 # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 3.5851 _pdbx_refine_tls.origin_y -2.2075 _pdbx_refine_tls.origin_z 13.6952 _pdbx_refine_tls.T[1][1] 0.0156 _pdbx_refine_tls.T[2][2] 0.0525 _pdbx_refine_tls.T[3][3] 0.0524 _pdbx_refine_tls.T[1][2] 0.0018 _pdbx_refine_tls.T[1][3] 0.0052 _pdbx_refine_tls.T[2][3] 0.0061 _pdbx_refine_tls.L[1][1] 0.1209 _pdbx_refine_tls.L[2][2] 1.5502 _pdbx_refine_tls.L[3][3] 0.3190 _pdbx_refine_tls.L[1][2] 0.1728 _pdbx_refine_tls.L[1][3] 0.0889 _pdbx_refine_tls.L[2][3] -0.4444 _pdbx_refine_tls.S[1][1] 0.0162 _pdbx_refine_tls.S[2][2] -0.0303 _pdbx_refine_tls.S[3][3] 0.0141 _pdbx_refine_tls.S[1][2] -0.0013 _pdbx_refine_tls.S[1][3] -0.0087 _pdbx_refine_tls.S[2][3] -0.0611 _pdbx_refine_tls.S[2][1] 0.0795 _pdbx_refine_tls.S[3][1] -0.0224 _pdbx_refine_tls.S[3][2] 0.0050 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 H 1 H 1106 ? . . . . ? 'X-RAY DIFFRACTION' 2 1 H 1201 H 1201 ? . . . . ? 'X-RAY DIFFRACTION' 3 1 H 1301 H 1379 ? . . . . ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 H GLY 992 ? A GLY 118 2 1 Y 1 H GLY 993 ? A GLY 119 3 1 Y 1 H GLY 994 ? A GLY 120 4 1 Y 1 H GLY 995 ? A GLY 121 5 1 Y 1 H SER 996 ? A SER 122 6 1 Y 1 H GLY 997 ? A GLY 123 7 1 Y 1 H GLY 998 ? A GLY 124 8 1 Y 1 H GLY 999 ? A GLY 125 9 1 Y 1 H GLY 1000 ? A GLY 126 10 1 Y 1 H SER 1001 F A SER 127 11 1 Y 1 H GLY 1001 E A GLY 128 12 1 Y 1 H ARG 1107 ? A ARG 241 13 1 Y 1 H ALA 1108 ? A ALA 242 14 1 Y 1 H PRO 1109 ? A PRO 243 15 1 Y 1 H HIS 1110 ? A HIS 244 16 1 Y 1 H HIS 1111 ? A HIS 245 17 1 Y 1 H HIS 1112 ? A HIS 246 18 1 Y 1 H HIS 1113 ? A HIS 247 19 1 Y 1 H HIS 1114 ? A HIS 248 20 1 Y 1 H HIS 1115 ? A HIS 249 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 B40 N N N N 74 B40 CA C N S 75 B40 C C N N 76 B40 CB C N N 77 B40 CG C Y N 78 B40 CD1 C Y N 79 B40 CD2 C Y N 80 B40 CE1 C Y N 81 B40 CE2 C Y N 82 B40 CZ C Y N 83 B40 CM C N N 84 B40 HN H N N 85 B40 HA H N N 86 B40 H H N N 87 B40 HB H N N 88 B40 HC H N N 89 B40 HBA H N N 90 B40 HBB H N N 91 B40 HD1 H N N 92 B40 HD2 H N N 93 B40 HE1 H N N 94 B40 HE2 H N N 95 B40 HZ H N N 96 B40 HM H N N 97 B40 HMA H N N 98 B40 HMB H N N 99 CYS N N N N 100 CYS CA C N R 101 CYS C C N N 102 CYS O O N N 103 CYS CB C N N 104 CYS SG S N N 105 CYS OXT O N N 106 CYS H H N N 107 CYS H2 H N N 108 CYS HA H N N 109 CYS HB2 H N N 110 CYS HB3 H N N 111 CYS HG H N N 112 CYS HXT H N N 113 GLN N N N N 114 GLN CA C N S 115 GLN C C N N 116 GLN O O N N 117 GLN CB C N N 118 GLN CG C N N 119 GLN CD C N N 120 GLN OE1 O N N 121 GLN NE2 N N N 122 GLN OXT O N N 123 GLN H H N N 124 GLN H2 H N N 125 GLN HA H N N 126 GLN HB2 H N N 127 GLN HB3 H N N 128 GLN HG2 H N N 129 GLN HG3 H N N 130 GLN HE21 H N N 131 GLN HE22 H N N 132 GLN HXT H N N 133 GLU N N N N 134 GLU CA C N S 135 GLU C C N N 136 GLU O O N N 137 GLU CB C N N 138 GLU CG C N N 139 GLU CD C N N 140 GLU OE1 O N N 141 GLU OE2 O N N 142 GLU OXT O N N 143 GLU H H N N 144 GLU H2 H N N 145 GLU HA H N N 146 GLU HB2 H N N 147 GLU HB3 H N N 148 GLU HG2 H N N 149 GLU HG3 H N N 150 GLU HE2 H N N 151 GLU HXT H N N 152 GLY N N N N 153 GLY CA C N N 154 GLY C C N N 155 GLY O O N N 156 GLY OXT O N N 157 GLY H H N N 158 GLY H2 H N N 159 GLY HA2 H N N 160 GLY HA3 H N N 161 GLY HXT H N N 162 HIS N N N N 163 HIS CA C N S 164 HIS C C N N 165 HIS O O N N 166 HIS CB C N N 167 HIS CG C Y N 168 HIS ND1 N Y N 169 HIS CD2 C Y N 170 HIS CE1 C Y N 171 HIS NE2 N Y N 172 HIS OXT O N N 173 HIS H H N N 174 HIS H2 H N N 175 HIS HA H N N 176 HIS HB2 H N N 177 HIS HB3 H N N 178 HIS HD1 H N N 179 HIS HD2 H N N 180 HIS HE1 H N N 181 HIS HE2 H N N 182 HIS HXT H N N 183 HOH O O N N 184 HOH H1 H N N 185 HOH H2 H N N 186 ILE N N N N 187 ILE CA C N S 188 ILE C C N N 189 ILE O O N N 190 ILE CB C N S 191 ILE CG1 C N N 192 ILE CG2 C N N 193 ILE CD1 C N N 194 ILE OXT O N N 195 ILE H H N N 196 ILE H2 H N N 197 ILE HA H N N 198 ILE HB H N N 199 ILE HG12 H N N 200 ILE HG13 H N N 201 ILE HG21 H N N 202 ILE HG22 H N N 203 ILE HG23 H N N 204 ILE HD11 H N N 205 ILE HD12 H N N 206 ILE HD13 H N N 207 ILE HXT H N N 208 LEU N N N N 209 LEU CA C N S 210 LEU C C N N 211 LEU O O N N 212 LEU CB C N N 213 LEU CG C N N 214 LEU CD1 C N N 215 LEU CD2 C N N 216 LEU OXT O N N 217 LEU H H N N 218 LEU H2 H N N 219 LEU HA H N N 220 LEU HB2 H N N 221 LEU HB3 H N N 222 LEU HG H N N 223 LEU HD11 H N N 224 LEU HD12 H N N 225 LEU HD13 H N N 226 LEU HD21 H N N 227 LEU HD22 H N N 228 LEU HD23 H N N 229 LEU HXT H N N 230 LYS N N N N 231 LYS CA C N S 232 LYS C C N N 233 LYS O O N N 234 LYS CB C N N 235 LYS CG C N N 236 LYS CD C N N 237 LYS CE C N N 238 LYS NZ N N N 239 LYS OXT O N N 240 LYS H H N N 241 LYS H2 H N N 242 LYS HA H N N 243 LYS HB2 H N N 244 LYS HB3 H N N 245 LYS HG2 H N N 246 LYS HG3 H N N 247 LYS HD2 H N N 248 LYS HD3 H N N 249 LYS HE2 H N N 250 LYS HE3 H N N 251 LYS HZ1 H N N 252 LYS HZ2 H N N 253 LYS HZ3 H N N 254 LYS HXT H N N 255 MET N N N N 256 MET CA C N S 257 MET C C N N 258 MET O O N N 259 MET CB C N N 260 MET CG C N N 261 MET SD S N N 262 MET CE C N N 263 MET OXT O N N 264 MET H H N N 265 MET H2 H N N 266 MET HA H N N 267 MET HB2 H N N 268 MET HB3 H N N 269 MET HG2 H N N 270 MET HG3 H N N 271 MET HE1 H N N 272 MET HE2 H N N 273 MET HE3 H N N 274 MET HXT H N N 275 PHE N N N N 276 PHE CA C N S 277 PHE C C N N 278 PHE O O N N 279 PHE CB C N N 280 PHE CG C Y N 281 PHE CD1 C Y N 282 PHE CD2 C Y N 283 PHE CE1 C Y N 284 PHE CE2 C Y N 285 PHE CZ C Y N 286 PHE OXT O N N 287 PHE H H N N 288 PHE H2 H N N 289 PHE HA H N N 290 PHE HB2 H N N 291 PHE HB3 H N N 292 PHE HD1 H N N 293 PHE HD2 H N N 294 PHE HE1 H N N 295 PHE HE2 H N N 296 PHE HZ H N N 297 PHE HXT H N N 298 PRO N N N N 299 PRO CA C N S 300 PRO C C N N 301 PRO O O N N 302 PRO CB C N N 303 PRO CG C N N 304 PRO CD C N N 305 PRO OXT O N N 306 PRO H H N N 307 PRO HA H N N 308 PRO HB2 H N N 309 PRO HB3 H N N 310 PRO HG2 H N N 311 PRO HG3 H N N 312 PRO HD2 H N N 313 PRO HD3 H N N 314 PRO HXT H N N 315 SER N N N N 316 SER CA C N S 317 SER C C N N 318 SER O O N N 319 SER CB C N N 320 SER OG O N N 321 SER OXT O N N 322 SER H H N N 323 SER H2 H N N 324 SER HA H N N 325 SER HB2 H N N 326 SER HB3 H N N 327 SER HG H N N 328 SER HXT H N N 329 THR N N N N 330 THR CA C N S 331 THR C C N N 332 THR O O N N 333 THR CB C N R 334 THR OG1 O N N 335 THR CG2 C N N 336 THR OXT O N N 337 THR H H N N 338 THR H2 H N N 339 THR HA H N N 340 THR HB H N N 341 THR HG1 H N N 342 THR HG21 H N N 343 THR HG22 H N N 344 THR HG23 H N N 345 THR HXT H N N 346 TRP N N N N 347 TRP CA C N S 348 TRP C C N N 349 TRP O O N N 350 TRP CB C N N 351 TRP CG C Y N 352 TRP CD1 C Y N 353 TRP CD2 C Y N 354 TRP NE1 N Y N 355 TRP CE2 C Y N 356 TRP CE3 C Y N 357 TRP CZ2 C Y N 358 TRP CZ3 C Y N 359 TRP CH2 C Y N 360 TRP OXT O N N 361 TRP H H N N 362 TRP H2 H N N 363 TRP HA H N N 364 TRP HB2 H N N 365 TRP HB3 H N N 366 TRP HD1 H N N 367 TRP HE1 H N N 368 TRP HE3 H N N 369 TRP HZ2 H N N 370 TRP HZ3 H N N 371 TRP HH2 H N N 372 TRP HXT H N N 373 TYR N N N N 374 TYR CA C N S 375 TYR C C N N 376 TYR O O N N 377 TYR CB C N N 378 TYR CG C Y N 379 TYR CD1 C Y N 380 TYR CD2 C Y N 381 TYR CE1 C Y N 382 TYR CE2 C Y N 383 TYR CZ C Y N 384 TYR OH O N N 385 TYR OXT O N N 386 TYR H H N N 387 TYR H2 H N N 388 TYR HA H N N 389 TYR HB2 H N N 390 TYR HB3 H N N 391 TYR HD1 H N N 392 TYR HD2 H N N 393 TYR HE1 H N N 394 TYR HE2 H N N 395 TYR HH H N N 396 TYR HXT H N N 397 VAL N N N N 398 VAL CA C N S 399 VAL C C N N 400 VAL O O N N 401 VAL CB C N N 402 VAL CG1 C N N 403 VAL CG2 C N N 404 VAL OXT O N N 405 VAL H H N N 406 VAL H2 H N N 407 VAL HA H N N 408 VAL HB H N N 409 VAL HG11 H N N 410 VAL HG12 H N N 411 VAL HG13 H N N 412 VAL HG21 H N N 413 VAL HG22 H N N 414 VAL HG23 H N N 415 VAL HXT H N N 416 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 B40 N CM sing N N 70 B40 N CA sing N N 71 B40 N HN sing N N 72 B40 C CA sing N N 73 B40 CA CB sing N N 74 B40 CA HA sing N N 75 B40 C H sing N N 76 B40 C HB sing N N 77 B40 C HC sing N N 78 B40 CB CG sing N N 79 B40 CB HBA sing N N 80 B40 CB HBB sing N N 81 B40 CD2 CG doub Y N 82 B40 CG CD1 sing Y N 83 B40 CD1 CE1 doub Y N 84 B40 CD1 HD1 sing N N 85 B40 CD2 CE2 sing Y N 86 B40 CD2 HD2 sing N N 87 B40 CZ CE1 sing Y N 88 B40 CE1 HE1 sing N N 89 B40 CE2 CZ doub Y N 90 B40 CE2 HE2 sing N N 91 B40 CZ HZ sing N N 92 B40 CM HM sing N N 93 B40 CM HMA sing N N 94 B40 CM HMB sing N N 95 CYS N CA sing N N 96 CYS N H sing N N 97 CYS N H2 sing N N 98 CYS CA C sing N N 99 CYS CA CB sing N N 100 CYS CA HA sing N N 101 CYS C O doub N N 102 CYS C OXT sing N N 103 CYS CB SG sing N N 104 CYS CB HB2 sing N N 105 CYS CB HB3 sing N N 106 CYS SG HG sing N N 107 CYS OXT HXT sing N N 108 GLN N CA sing N N 109 GLN N H sing N N 110 GLN N H2 sing N N 111 GLN CA C sing N N 112 GLN CA CB sing N N 113 GLN CA HA sing N N 114 GLN C O doub N N 115 GLN C OXT sing N N 116 GLN CB CG sing N N 117 GLN CB HB2 sing N N 118 GLN CB HB3 sing N N 119 GLN CG CD sing N N 120 GLN CG HG2 sing N N 121 GLN CG HG3 sing N N 122 GLN CD OE1 doub N N 123 GLN CD NE2 sing N N 124 GLN NE2 HE21 sing N N 125 GLN NE2 HE22 sing N N 126 GLN OXT HXT sing N N 127 GLU N CA sing N N 128 GLU N H sing N N 129 GLU N H2 sing N N 130 GLU CA C sing N N 131 GLU CA CB sing N N 132 GLU CA HA sing N N 133 GLU C O doub N N 134 GLU C OXT sing N N 135 GLU CB CG sing N N 136 GLU CB HB2 sing N N 137 GLU CB HB3 sing N N 138 GLU CG CD sing N N 139 GLU CG HG2 sing N N 140 GLU CG HG3 sing N N 141 GLU CD OE1 doub N N 142 GLU CD OE2 sing N N 143 GLU OE2 HE2 sing N N 144 GLU OXT HXT sing N N 145 GLY N CA sing N N 146 GLY N H sing N N 147 GLY N H2 sing N N 148 GLY CA C sing N N 149 GLY CA HA2 sing N N 150 GLY CA HA3 sing N N 151 GLY C O doub N N 152 GLY C OXT sing N N 153 GLY OXT HXT sing N N 154 HIS N CA sing N N 155 HIS N H sing N N 156 HIS N H2 sing N N 157 HIS CA C sing N N 158 HIS CA CB sing N N 159 HIS CA HA sing N N 160 HIS C O doub N N 161 HIS C OXT sing N N 162 HIS CB CG sing N N 163 HIS CB HB2 sing N N 164 HIS CB HB3 sing N N 165 HIS CG ND1 sing Y N 166 HIS CG CD2 doub Y N 167 HIS ND1 CE1 doub Y N 168 HIS ND1 HD1 sing N N 169 HIS CD2 NE2 sing Y N 170 HIS CD2 HD2 sing N N 171 HIS CE1 NE2 sing Y N 172 HIS CE1 HE1 sing N N 173 HIS NE2 HE2 sing N N 174 HIS OXT HXT sing N N 175 HOH O H1 sing N N 176 HOH O H2 sing N N 177 ILE N CA sing N N 178 ILE N H sing N N 179 ILE N H2 sing N N 180 ILE CA C sing N N 181 ILE CA CB sing N N 182 ILE CA HA sing N N 183 ILE C O doub N N 184 ILE C OXT sing N N 185 ILE CB CG1 sing N N 186 ILE CB CG2 sing N N 187 ILE CB HB sing N N 188 ILE CG1 CD1 sing N N 189 ILE CG1 HG12 sing N N 190 ILE CG1 HG13 sing N N 191 ILE CG2 HG21 sing N N 192 ILE CG2 HG22 sing N N 193 ILE CG2 HG23 sing N N 194 ILE CD1 HD11 sing N N 195 ILE CD1 HD12 sing N N 196 ILE CD1 HD13 sing N N 197 ILE OXT HXT sing N N 198 LEU N CA sing N N 199 LEU N H sing N N 200 LEU N H2 sing N N 201 LEU CA C sing N N 202 LEU CA CB sing N N 203 LEU CA HA sing N N 204 LEU C O doub N N 205 LEU C OXT sing N N 206 LEU CB CG sing N N 207 LEU CB HB2 sing N N 208 LEU CB HB3 sing N N 209 LEU CG CD1 sing N N 210 LEU CG CD2 sing N N 211 LEU CG HG sing N N 212 LEU CD1 HD11 sing N N 213 LEU CD1 HD12 sing N N 214 LEU CD1 HD13 sing N N 215 LEU CD2 HD21 sing N N 216 LEU CD2 HD22 sing N N 217 LEU CD2 HD23 sing N N 218 LEU OXT HXT sing N N 219 LYS N CA sing N N 220 LYS N H sing N N 221 LYS N H2 sing N N 222 LYS CA C sing N N 223 LYS CA CB sing N N 224 LYS CA HA sing N N 225 LYS C O doub N N 226 LYS C OXT sing N N 227 LYS CB CG sing N N 228 LYS CB HB2 sing N N 229 LYS CB HB3 sing N N 230 LYS CG CD sing N N 231 LYS CG HG2 sing N N 232 LYS CG HG3 sing N N 233 LYS CD CE sing N N 234 LYS CD HD2 sing N N 235 LYS CD HD3 sing N N 236 LYS CE NZ sing N N 237 LYS CE HE2 sing N N 238 LYS CE HE3 sing N N 239 LYS NZ HZ1 sing N N 240 LYS NZ HZ2 sing N N 241 LYS NZ HZ3 sing N N 242 LYS OXT HXT sing N N 243 MET N CA sing N N 244 MET N H sing N N 245 MET N H2 sing N N 246 MET CA C sing N N 247 MET CA CB sing N N 248 MET CA HA sing N N 249 MET C O doub N N 250 MET C OXT sing N N 251 MET CB CG sing N N 252 MET CB HB2 sing N N 253 MET CB HB3 sing N N 254 MET CG SD sing N N 255 MET CG HG2 sing N N 256 MET CG HG3 sing N N 257 MET SD CE sing N N 258 MET CE HE1 sing N N 259 MET CE HE2 sing N N 260 MET CE HE3 sing N N 261 MET OXT HXT sing N N 262 PHE N CA sing N N 263 PHE N H sing N N 264 PHE N H2 sing N N 265 PHE CA C sing N N 266 PHE CA CB sing N N 267 PHE CA HA sing N N 268 PHE C O doub N N 269 PHE C OXT sing N N 270 PHE CB CG sing N N 271 PHE CB HB2 sing N N 272 PHE CB HB3 sing N N 273 PHE CG CD1 doub Y N 274 PHE CG CD2 sing Y N 275 PHE CD1 CE1 sing Y N 276 PHE CD1 HD1 sing N N 277 PHE CD2 CE2 doub Y N 278 PHE CD2 HD2 sing N N 279 PHE CE1 CZ doub Y N 280 PHE CE1 HE1 sing N N 281 PHE CE2 CZ sing Y N 282 PHE CE2 HE2 sing N N 283 PHE CZ HZ sing N N 284 PHE OXT HXT sing N N 285 PRO N CA sing N N 286 PRO N CD sing N N 287 PRO N H sing N N 288 PRO CA C sing N N 289 PRO CA CB sing N N 290 PRO CA HA sing N N 291 PRO C O doub N N 292 PRO C OXT sing N N 293 PRO CB CG sing N N 294 PRO CB HB2 sing N N 295 PRO CB HB3 sing N N 296 PRO CG CD sing N N 297 PRO CG HG2 sing N N 298 PRO CG HG3 sing N N 299 PRO CD HD2 sing N N 300 PRO CD HD3 sing N N 301 PRO OXT HXT sing N N 302 SER N CA sing N N 303 SER N H sing N N 304 SER N H2 sing N N 305 SER CA C sing N N 306 SER CA CB sing N N 307 SER CA HA sing N N 308 SER C O doub N N 309 SER C OXT sing N N 310 SER CB OG sing N N 311 SER CB HB2 sing N N 312 SER CB HB3 sing N N 313 SER OG HG sing N N 314 SER OXT HXT sing N N 315 THR N CA sing N N 316 THR N H sing N N 317 THR N H2 sing N N 318 THR CA C sing N N 319 THR CA CB sing N N 320 THR CA HA sing N N 321 THR C O doub N N 322 THR C OXT sing N N 323 THR CB OG1 sing N N 324 THR CB CG2 sing N N 325 THR CB HB sing N N 326 THR OG1 HG1 sing N N 327 THR CG2 HG21 sing N N 328 THR CG2 HG22 sing N N 329 THR CG2 HG23 sing N N 330 THR OXT HXT sing N N 331 TRP N CA sing N N 332 TRP N H sing N N 333 TRP N H2 sing N N 334 TRP CA C sing N N 335 TRP CA CB sing N N 336 TRP CA HA sing N N 337 TRP C O doub N N 338 TRP C OXT sing N N 339 TRP CB CG sing N N 340 TRP CB HB2 sing N N 341 TRP CB HB3 sing N N 342 TRP CG CD1 doub Y N 343 TRP CG CD2 sing Y N 344 TRP CD1 NE1 sing Y N 345 TRP CD1 HD1 sing N N 346 TRP CD2 CE2 doub Y N 347 TRP CD2 CE3 sing Y N 348 TRP NE1 CE2 sing Y N 349 TRP NE1 HE1 sing N N 350 TRP CE2 CZ2 sing Y N 351 TRP CE3 CZ3 doub Y N 352 TRP CE3 HE3 sing N N 353 TRP CZ2 CH2 doub Y N 354 TRP CZ2 HZ2 sing N N 355 TRP CZ3 CH2 sing Y N 356 TRP CZ3 HZ3 sing N N 357 TRP CH2 HH2 sing N N 358 TRP OXT HXT sing N N 359 TYR N CA sing N N 360 TYR N H sing N N 361 TYR N H2 sing N N 362 TYR CA C sing N N 363 TYR CA CB sing N N 364 TYR CA HA sing N N 365 TYR C O doub N N 366 TYR C OXT sing N N 367 TYR CB CG sing N N 368 TYR CB HB2 sing N N 369 TYR CB HB3 sing N N 370 TYR CG CD1 doub Y N 371 TYR CG CD2 sing Y N 372 TYR CD1 CE1 sing Y N 373 TYR CD1 HD1 sing N N 374 TYR CD2 CE2 doub Y N 375 TYR CD2 HD2 sing N N 376 TYR CE1 CZ doub Y N 377 TYR CE1 HE1 sing N N 378 TYR CE2 CZ sing Y N 379 TYR CE2 HE2 sing N N 380 TYR CZ OH sing N N 381 TYR OH HH sing N N 382 TYR OXT HXT sing N N 383 VAL N CA sing N N 384 VAL N H sing N N 385 VAL N H2 sing N N 386 VAL CA C sing N N 387 VAL CA CB sing N N 388 VAL CA HA sing N N 389 VAL C O doub N N 390 VAL C OXT sing N N 391 VAL CB CG1 sing N N 392 VAL CB CG2 sing N N 393 VAL CB HB sing N N 394 VAL CG1 HG11 sing N N 395 VAL CG1 HG12 sing N N 396 VAL CG1 HG13 sing N N 397 VAL CG2 HG21 sing N N 398 VAL CG2 HG22 sing N N 399 VAL CG2 HG23 sing N N 400 VAL OXT HXT sing N N 401 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3GKZ _pdbx_initial_refinement_model.details 'PDB ENTRY 3GKZ' # _atom_sites.entry_id 4GQP _atom_sites.fract_transf_matrix[1][1] 0.028972 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.004175 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015322 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.020839 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_