data_4H8K # _entry.id 4H8K # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4H8K pdb_00004h8k 10.2210/pdb4h8k/pdb NDB NA2039 ? ? RCSB RCSB075154 ? ? WWPDB D_1000075154 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4H8K _pdbx_database_status.recvd_initial_deposition_date 2012-09-23 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Nguyen, T.N.' 1 'You, D.J.' 2 'Matsumoto, H.' 3 'Kanaya, E.' 4 'Kanaya, S.' 5 # _citation.id primary _citation.title 'Crystal structure of metagenome-derived LC11-RNase H1 in complex with RNA/DNA hybrid' _citation.journal_abbrev J.Struct.Biol. _citation.journal_volume 182 _citation.page_first 144 _citation.page_last 154 _citation.year 2013 _citation.journal_id_ASTM JSBIEM _citation.country US _citation.journal_id_ISSN 1047-8477 _citation.journal_id_CSD 0803 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23500886 _citation.pdbx_database_id_DOI 10.1016/j.jsb.2013.02.018 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Nguyen, T.N.' 1 ? primary 'You, D.J.' 2 ? primary 'Matsumoto, H.' 3 ? primary 'Kanaya, E.' 4 ? primary 'Koga, Y.' 5 ? primary 'Kanaya, S.' 6 ? # _cell.entry_id 4H8K _cell.length_a 42.613 _cell.length_b 90.758 _cell.length_c 55.605 _cell.angle_alpha 90.00 _cell.angle_beta 97.82 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4H8K _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Ribonuclease H' 15630.956 2 3.1.26.4 D77N ? ? 2 polymer syn ;RNA (5'-R(*CP*GP*AP*CP*AP*CP*CP*UP*GP*AP*UP*UP*CP*C)-3') ; 4382.659 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(*GP*GP*AP*AP*TP*CP*AP*GP*GP*TP*GP*TP*CP*G)-3') ; 4360.840 1 ? ? ? ? 4 water nat water 18.015 92 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'LC11-RNase H1' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MNKIIIYTDGGARGNPGPAGIGVVITDEKGNTLHESSAYIGETTNNVAEYEALIRALEDLQMFGDKLVDMEVEVRMNSEL IVRQMQGVYKVKEPTLKEKFAKIAHIKMERVPNLVFVHIPREKNARADELVNEAIDKALS ; ;MNKIIIYTDGGARGNPGPAGIGVVITDEKGNTLHESSAYIGETTNNVAEYEALIRALEDLQMFGDKLVDMEVEVRMNSEL IVRQMQGVYKVKEPTLKEKFAKIAHIKMERVPNLVFVHIPREKNARADELVNEAIDKALS ; A,B ? 2 polyribonucleotide no no CGACACCUGAUUCC CGACACCUGAUUCC C ? 3 polydeoxyribonucleotide no no '(DG)(DG)(DA)(DA)(DT)(DC)(DA)(DG)(DG)(DT)(DG)(DT)(DC)(DG)' GGAATCAGGTGTCG D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ASN n 1 3 LYS n 1 4 ILE n 1 5 ILE n 1 6 ILE n 1 7 TYR n 1 8 THR n 1 9 ASP n 1 10 GLY n 1 11 GLY n 1 12 ALA n 1 13 ARG n 1 14 GLY n 1 15 ASN n 1 16 PRO n 1 17 GLY n 1 18 PRO n 1 19 ALA n 1 20 GLY n 1 21 ILE n 1 22 GLY n 1 23 VAL n 1 24 VAL n 1 25 ILE n 1 26 THR n 1 27 ASP n 1 28 GLU n 1 29 LYS n 1 30 GLY n 1 31 ASN n 1 32 THR n 1 33 LEU n 1 34 HIS n 1 35 GLU n 1 36 SER n 1 37 SER n 1 38 ALA n 1 39 TYR n 1 40 ILE n 1 41 GLY n 1 42 GLU n 1 43 THR n 1 44 THR n 1 45 ASN n 1 46 ASN n 1 47 VAL n 1 48 ALA n 1 49 GLU n 1 50 TYR n 1 51 GLU n 1 52 ALA n 1 53 LEU n 1 54 ILE n 1 55 ARG n 1 56 ALA n 1 57 LEU n 1 58 GLU n 1 59 ASP n 1 60 LEU n 1 61 GLN n 1 62 MET n 1 63 PHE n 1 64 GLY n 1 65 ASP n 1 66 LYS n 1 67 LEU n 1 68 VAL n 1 69 ASP n 1 70 MET n 1 71 GLU n 1 72 VAL n 1 73 GLU n 1 74 VAL n 1 75 ARG n 1 76 MET n 1 77 ASN n 1 78 SER n 1 79 GLU n 1 80 LEU n 1 81 ILE n 1 82 VAL n 1 83 ARG n 1 84 GLN n 1 85 MET n 1 86 GLN n 1 87 GLY n 1 88 VAL n 1 89 TYR n 1 90 LYS n 1 91 VAL n 1 92 LYS n 1 93 GLU n 1 94 PRO n 1 95 THR n 1 96 LEU n 1 97 LYS n 1 98 GLU n 1 99 LYS n 1 100 PHE n 1 101 ALA n 1 102 LYS n 1 103 ILE n 1 104 ALA n 1 105 HIS n 1 106 ILE n 1 107 LYS n 1 108 MET n 1 109 GLU n 1 110 ARG n 1 111 VAL n 1 112 PRO n 1 113 ASN n 1 114 LEU n 1 115 VAL n 1 116 PHE n 1 117 VAL n 1 118 HIS n 1 119 ILE n 1 120 PRO n 1 121 ARG n 1 122 GLU n 1 123 LYS n 1 124 ASN n 1 125 ALA n 1 126 ARG n 1 127 ALA n 1 128 ASP n 1 129 GLU n 1 130 LEU n 1 131 VAL n 1 132 ASN n 1 133 GLU n 1 134 ALA n 1 135 ILE n 1 136 ASP n 1 137 LYS n 1 138 ALA n 1 139 LEU n 1 140 SER n 2 1 C n 2 2 G n 2 3 A n 2 4 C n 2 5 A n 2 6 C n 2 7 C n 2 8 U n 2 9 G n 2 10 A n 2 11 U n 2 12 U n 2 13 C n 2 14 C n 3 1 DG n 3 2 DG n 3 3 DA n 3 4 DA n 3 5 DT n 3 6 DC n 3 7 DA n 3 8 DG n 3 9 DG n 3 10 DT n 3 11 DG n 3 12 DT n 3 13 DC n 3 14 DG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'uncultured organism' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 155900 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'MIC2067(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET25b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample ? ? ? ? ? 'This sequence occurs naturally in bacteria' 3 1 sample ? ? ? ? ? 'This sequence occurs naturally in bacteria' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP E0X767_9ZZZZ E0X767 1 ;MNKIIIYTDGGARGNPGPAGIGVVITDEKGNTLHESSAYIGETTNNVAEYEALIRALEDLQMFGDKLVDMEVEVRMDSEL IVRQMQGVYKVKEPTLKEKFAKIAHIKMERVPNLVFVHIPREKNARADELVNEAIDKALS ; 1 ? 2 PDB 4H8K 4H8K 2 ? ? ? 3 PDB 4H8K 4H8K 3 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4H8K A 1 ? 140 ? E0X767 1 ? 140 ? 1 140 2 1 4H8K B 1 ? 140 ? E0X767 1 ? 140 ? 1 140 3 2 4H8K C 1 ? 14 ? 4H8K 1 ? 14 ? 1 14 4 3 4H8K D 1 ? 14 ? 4H8K 1 ? 14 ? 1 14 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4H8K ASN A 77 ? UNP E0X767 ASP 77 'engineered mutation' 77 1 2 4H8K ASN B 77 ? UNP E0X767 ASP 77 'engineered mutation' 77 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4H8K _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.66 _exptl_crystal.density_percent_sol 53.81 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details '0.2M ammonium acetate, 0.1M Tris, 25% PEG3350, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'BRUKER SMART 6500' _diffrn_detector.pdbx_collection_date 2011-11-13 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'horizontal focusing mirror' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SPRING-8 BEAMLINE BL44XU' _diffrn_source.pdbx_synchrotron_site SPring-8 _diffrn_source.pdbx_synchrotron_beamline BL44XU _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9 # _reflns.entry_id 4H8K _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 50 _reflns.d_resolution_high 2.3 _reflns.number_obs 17868 _reflns.number_all ? _reflns.percent_possible_obs 95.4 _reflns.pdbx_Rmerge_I_obs 0.049 _reflns.pdbx_Rsym_value 0.049 _reflns.pdbx_netI_over_sigmaI 42.556 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 7.4 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_unique_obs _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_rejects _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.number_possible _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.meanI_over_sigI_all _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.3 2.34 82.1 0.22 ? 5.72 6.8 ? 782 ? ? ? ? ? ? ? ? ? ? ? ? ? 1 1 2.34 2.38 86.0 0.211 ? 5.78 6.9 ? 797 ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 2.38 2.43 88 0.201 ? 5.89 6.9 ? 813 ? ? ? ? ? ? ? ? ? ? ? ? ? 3 1 2.43 2.48 92.5 0.172 ? 6.01 7.1 ? 857 ? ? ? ? ? ? ? ? ? ? ? ? ? 4 1 2.48 2.53 92.1 0.161 ? 6.45 7.2 ? 870 ? ? ? ? ? ? ? ? ? ? ? ? ? 5 1 2.53 2.59 98.0 0.140 ? 6.42 7.4 ? 897 ? ? ? ? ? ? ? ? ? ? ? ? ? 6 1 # _refine.entry_id 4H8K _refine.ls_number_reflns_obs 16914 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 38.28 _refine.ls_d_res_high 2.30 _refine.ls_percent_reflns_obs 95.27 _refine.ls_R_factor_obs 0.21025 _refine.ls_R_factor_all 0.21025 _refine.ls_R_factor_R_work 0.20658 _refine.ls_R_factor_R_free 0.27785 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.2 _refine.ls_number_reflns_R_free 919 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.951 _refine.correlation_coeff_Fo_to_Fc_free 0.908 _refine.B_iso_mean 52.048 _refine.aniso_B[1][1] -3.20 _refine.aniso_B[2][2] -3.68 _refine.aniso_B[3][3] 7.25 _refine.aniso_B[1][2] -0.00 _refine.aniso_B[1][3] 1.35 _refine.aniso_B[2][3] -0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 3U3G _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.349 _refine.pdbx_overall_ESU_R_Free 0.270 _refine.overall_SU_ML 0.187 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 7.640 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2156 _refine_hist.pdbx_number_atoms_nucleic_acid 579 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 92 _refine_hist.number_atoms_total 2827 _refine_hist.d_res_high 2.30 _refine_hist.d_res_low 38.28 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.007 ? ? ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.053 ? ? ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 8.555 ? ? ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 37.912 ? ? ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 21.947 ? ? ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 23.239 ? ? ? ? 'X-RAY DIFFRACTION' r_chiral_restr 0.075 ? ? ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.017 ? ? ? ? 'X-RAY DIFFRACTION' r_mcbond_it 1.554 ? ? ? ? 'X-RAY DIFFRACTION' r_mcangle_it 2.702 ? ? ? ? 'X-RAY DIFFRACTION' r_scbond_it ? ? ? ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.299 _refine_ls_shell.d_res_low 2.359 _refine_ls_shell.number_reflns_R_work 1079 _refine_ls_shell.R_factor_R_work 0.281 _refine_ls_shell.percent_reflns_obs 82.22 _refine_ls_shell.R_factor_R_free 0.346 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 63 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? # _struct.entry_id 4H8K _struct.title 'Crystal structure of LC11-RNase H1 in complex with RNA/DNA hybrid' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4H8K _struct_keywords.pdbx_keywords Hydrolase/DNA/RNA _struct_keywords.text 'RNase H, Ribonuclease H RNA DNA Hybrid, Hydrolase, Ribonuclease H, Hydrolase-DNA-RNA complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 44 ? LEU A 60 ? THR A 44 LEU A 60 1 ? 17 HELX_P HELX_P2 2 GLN A 61 ? GLY A 64 ? GLN A 61 GLY A 64 5 ? 4 HELX_P HELX_P3 3 SER A 78 ? GLN A 86 ? SER A 78 GLN A 86 1 ? 9 HELX_P HELX_P4 4 GLU A 93 ? ARG A 110 ? GLU A 93 ARG A 110 1 ? 18 HELX_P HELX_P5 5 PRO A 120 ? LYS A 123 ? PRO A 120 LYS A 123 5 ? 4 HELX_P HELX_P6 6 ASN A 124 ? SER A 140 ? ASN A 124 SER A 140 1 ? 17 HELX_P HELX_P7 7 THR B 44 ? LEU B 60 ? THR B 44 LEU B 60 1 ? 17 HELX_P HELX_P8 8 GLN B 61 ? GLY B 64 ? GLN B 61 GLY B 64 5 ? 4 HELX_P HELX_P9 9 SER B 78 ? GLN B 86 ? SER B 78 GLN B 86 1 ? 9 HELX_P HELX_P10 10 GLU B 93 ? VAL B 111 ? GLU B 93 VAL B 111 1 ? 19 HELX_P HELX_P11 11 PRO B 120 ? LYS B 123 ? PRO B 120 LYS B 123 5 ? 4 HELX_P HELX_P12 12 ASN B 124 ? SER B 140 ? ASN B 124 SER B 140 1 ? 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? C C 1 N3 ? ? ? 1_555 D DG 14 N1 ? ? C C 1 D DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? C C 1 N4 ? ? ? 1_555 D DG 14 O6 ? ? C C 1 D DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? C C 1 O2 ? ? ? 1_555 D DG 14 N2 ? ? C C 1 D DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? C G 2 N1 ? ? ? 1_555 D DC 13 N3 ? ? C G 2 D DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? C G 2 N2 ? ? ? 1_555 D DC 13 O2 ? ? C G 2 D DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? C G 2 O6 ? ? ? 1_555 D DC 13 N4 ? ? C G 2 D DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? C A 3 N1 ? ? ? 1_555 D DT 12 N3 ? ? C A 3 D DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? C A 3 N6 ? ? ? 1_555 D DT 12 O4 ? ? C A 3 D DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? C C 4 N3 ? ? ? 1_555 D DG 11 N1 ? ? C C 4 D DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? C C 4 N4 ? ? ? 1_555 D DG 11 O6 ? ? C C 4 D DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? C C 4 O2 ? ? ? 1_555 D DG 11 N2 ? ? C C 4 D DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? C A 5 N1 ? ? ? 1_555 D DT 10 N3 ? ? C A 5 D DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? C A 5 N6 ? ? ? 1_555 D DT 10 O4 ? ? C A 5 D DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? C C 6 N3 ? ? ? 1_555 D DG 9 N1 ? ? C C 6 D DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? C C 6 N4 ? ? ? 1_555 D DG 9 O6 ? ? C C 6 D DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? C C 6 O2 ? ? ? 1_555 D DG 9 N2 ? ? C C 6 D DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? C C 7 N3 ? ? ? 1_555 D DG 8 N1 ? ? C C 7 D DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C C 7 N4 ? ? ? 1_555 D DG 8 O6 ? ? C C 7 D DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C C 7 O2 ? ? ? 1_555 D DG 8 N2 ? ? C C 7 D DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C U 8 N3 ? ? ? 1_555 D DA 7 N1 ? ? C U 8 D DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C U 8 O4 ? ? ? 1_555 D DA 7 N6 ? ? C U 8 D DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C G 9 N1 ? ? ? 1_555 D DC 6 N3 ? ? C G 9 D DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C G 9 N2 ? ? ? 1_555 D DC 6 O2 ? ? C G 9 D DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C G 9 O6 ? ? ? 1_555 D DC 6 N4 ? ? C G 9 D DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C A 10 N1 ? ? ? 1_555 D DT 5 N3 ? ? C A 10 D DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C A 10 N6 ? ? ? 1_555 D DT 5 O4 ? ? C A 10 D DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? C U 11 N3 ? ? ? 1_555 D DA 4 N1 ? ? C U 11 D DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? C U 11 O4 ? ? ? 1_555 D DA 4 N6 ? ? C U 11 D DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? C U 12 N3 ? ? ? 1_555 D DA 3 N1 ? ? C U 12 D DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? C U 12 O4 ? ? ? 1_555 D DA 3 N6 ? ? C U 12 D DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? C C 13 N3 ? ? ? 1_555 D DG 2 N1 ? ? C C 13 D DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C C 13 N4 ? ? ? 1_555 D DG 2 O6 ? ? C C 13 D DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? C C 13 O2 ? ? ? 1_555 D DG 2 N2 ? ? C C 13 D DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C C 14 N3 ? ? ? 1_555 D DG 1 N1 ? ? C C 14 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? C C 14 N4 ? ? ? 1_555 D DG 1 O6 ? ? C C 14 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? C C 14 O2 ? ? ? 1_555 D DG 1 N2 ? ? C C 14 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ASN 15 A . ? ASN 15 A PRO 16 A ? PRO 16 A 1 9.91 2 ASN 15 B . ? ASN 15 B PRO 16 B ? PRO 16 B 1 8.05 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel A 4 5 ? parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? parallel B 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 32 ? THR A 43 ? THR A 32 THR A 43 A 2 GLY A 17 ? ASP A 27 ? GLY A 17 ASP A 27 A 3 ILE A 4 ? ALA A 12 ? ILE A 4 ALA A 12 A 4 VAL A 72 ? MET A 76 ? VAL A 72 MET A 76 A 5 LEU A 114 ? HIS A 118 ? LEU A 114 HIS A 118 B 1 THR B 32 ? THR B 43 ? THR B 32 THR B 43 B 2 GLY B 17 ? ASP B 27 ? GLY B 17 ASP B 27 B 3 ILE B 4 ? ALA B 12 ? ILE B 4 ALA B 12 B 4 VAL B 72 ? MET B 76 ? VAL B 72 MET B 76 B 5 LEU B 114 ? HIS B 118 ? LEU B 114 HIS B 118 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O SER A 36 ? O SER A 36 N VAL A 23 ? N VAL A 23 A 2 3 O VAL A 24 ? O VAL A 24 N TYR A 7 ? N TYR A 7 A 3 4 N ILE A 4 ? N ILE A 4 O GLU A 73 ? O GLU A 73 A 4 5 N VAL A 74 ? N VAL A 74 O VAL A 115 ? O VAL A 115 B 1 2 O THR B 43 ? O THR B 43 N GLY B 17 ? N GLY B 17 B 2 3 O VAL B 24 ? O VAL B 24 N TYR B 7 ? N TYR B 7 B 3 4 N ILE B 6 ? N ILE B 6 O ARG B 75 ? O ARG B 75 B 4 5 N VAL B 74 ? N VAL B 74 O VAL B 115 ? O VAL B 115 # _database_PDB_matrix.entry_id 4H8K _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4H8K _atom_sites.fract_transf_matrix[1][1] 0.023467 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.003223 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011018 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018153 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 ASN 2 2 ? ? ? A . n A 1 3 LYS 3 3 3 LYS LYS A . n A 1 4 ILE 4 4 4 ILE ILE A . n A 1 5 ILE 5 5 5 ILE ILE A . n A 1 6 ILE 6 6 6 ILE ILE A . n A 1 7 TYR 7 7 7 TYR TYR A . n A 1 8 THR 8 8 8 THR THR A . n A 1 9 ASP 9 9 9 ASP ASP A . n A 1 10 GLY 10 10 10 GLY GLY A . n A 1 11 GLY 11 11 11 GLY GLY A . n A 1 12 ALA 12 12 12 ALA ALA A . n A 1 13 ARG 13 13 13 ARG ARG A . n A 1 14 GLY 14 14 14 GLY GLY A . n A 1 15 ASN 15 15 15 ASN ASN A . n A 1 16 PRO 16 16 16 PRO PRO A . n A 1 17 GLY 17 17 17 GLY GLY A . n A 1 18 PRO 18 18 18 PRO PRO A . n A 1 19 ALA 19 19 19 ALA ALA A . n A 1 20 GLY 20 20 20 GLY GLY A . n A 1 21 ILE 21 21 21 ILE ILE A . n A 1 22 GLY 22 22 22 GLY GLY A . n A 1 23 VAL 23 23 23 VAL VAL A . n A 1 24 VAL 24 24 24 VAL VAL A . n A 1 25 ILE 25 25 25 ILE ILE A . n A 1 26 THR 26 26 26 THR THR A . n A 1 27 ASP 27 27 27 ASP ASP A . n A 1 28 GLU 28 28 28 GLU GLU A . n A 1 29 LYS 29 29 29 LYS LYS A . n A 1 30 GLY 30 30 30 GLY GLY A . n A 1 31 ASN 31 31 31 ASN ASN A . n A 1 32 THR 32 32 32 THR THR A . n A 1 33 LEU 33 33 33 LEU LEU A . n A 1 34 HIS 34 34 34 HIS HIS A . n A 1 35 GLU 35 35 35 GLU GLU A . n A 1 36 SER 36 36 36 SER SER A . n A 1 37 SER 37 37 37 SER SER A . n A 1 38 ALA 38 38 38 ALA ALA A . n A 1 39 TYR 39 39 39 TYR TYR A . n A 1 40 ILE 40 40 40 ILE ILE A . n A 1 41 GLY 41 41 41 GLY GLY A . n A 1 42 GLU 42 42 42 GLU GLU A . n A 1 43 THR 43 43 43 THR THR A . n A 1 44 THR 44 44 44 THR THR A . n A 1 45 ASN 45 45 45 ASN ASN A . n A 1 46 ASN 46 46 46 ASN ASN A . n A 1 47 VAL 47 47 47 VAL VAL A . n A 1 48 ALA 48 48 48 ALA ALA A . n A 1 49 GLU 49 49 49 GLU GLU A . n A 1 50 TYR 50 50 50 TYR TYR A . n A 1 51 GLU 51 51 51 GLU GLU A . n A 1 52 ALA 52 52 52 ALA ALA A . n A 1 53 LEU 53 53 53 LEU LEU A . n A 1 54 ILE 54 54 54 ILE ILE A . n A 1 55 ARG 55 55 55 ARG ARG A . n A 1 56 ALA 56 56 56 ALA ALA A . n A 1 57 LEU 57 57 57 LEU LEU A . n A 1 58 GLU 58 58 58 GLU GLU A . n A 1 59 ASP 59 59 59 ASP ASP A . n A 1 60 LEU 60 60 60 LEU LEU A . n A 1 61 GLN 61 61 61 GLN GLN A . n A 1 62 MET 62 62 62 MET MET A . n A 1 63 PHE 63 63 63 PHE PHE A . n A 1 64 GLY 64 64 64 GLY GLY A . n A 1 65 ASP 65 65 65 ASP ASP A . n A 1 66 LYS 66 66 66 LYS LYS A . n A 1 67 LEU 67 67 67 LEU LEU A . n A 1 68 VAL 68 68 68 VAL VAL A . n A 1 69 ASP 69 69 69 ASP ASP A . n A 1 70 MET 70 70 70 MET MET A . n A 1 71 GLU 71 71 71 GLU GLU A . n A 1 72 VAL 72 72 72 VAL VAL A . n A 1 73 GLU 73 73 73 GLU GLU A . n A 1 74 VAL 74 74 74 VAL VAL A . n A 1 75 ARG 75 75 75 ARG ARG A . n A 1 76 MET 76 76 76 MET MET A . n A 1 77 ASN 77 77 77 ASN ASN A . n A 1 78 SER 78 78 78 SER SER A . n A 1 79 GLU 79 79 79 GLU GLU A . n A 1 80 LEU 80 80 80 LEU LEU A . n A 1 81 ILE 81 81 81 ILE ILE A . n A 1 82 VAL 82 82 82 VAL VAL A . n A 1 83 ARG 83 83 83 ARG ARG A . n A 1 84 GLN 84 84 84 GLN GLN A . n A 1 85 MET 85 85 85 MET MET A . n A 1 86 GLN 86 86 86 GLN GLN A . n A 1 87 GLY 87 87 87 GLY GLY A . n A 1 88 VAL 88 88 88 VAL VAL A . n A 1 89 TYR 89 89 89 TYR TYR A . n A 1 90 LYS 90 90 90 LYS LYS A . n A 1 91 VAL 91 91 91 VAL VAL A . n A 1 92 LYS 92 92 92 LYS LYS A . n A 1 93 GLU 93 93 93 GLU GLU A . n A 1 94 PRO 94 94 94 PRO PRO A . n A 1 95 THR 95 95 95 THR THR A . n A 1 96 LEU 96 96 96 LEU LEU A . n A 1 97 LYS 97 97 97 LYS LYS A . n A 1 98 GLU 98 98 98 GLU GLU A . n A 1 99 LYS 99 99 99 LYS LYS A . n A 1 100 PHE 100 100 100 PHE PHE A . n A 1 101 ALA 101 101 101 ALA ALA A . n A 1 102 LYS 102 102 102 LYS LYS A . n A 1 103 ILE 103 103 103 ILE ILE A . n A 1 104 ALA 104 104 104 ALA ALA A . n A 1 105 HIS 105 105 105 HIS HIS A . n A 1 106 ILE 106 106 106 ILE ILE A . n A 1 107 LYS 107 107 107 LYS LYS A . n A 1 108 MET 108 108 108 MET MET A . n A 1 109 GLU 109 109 109 GLU GLU A . n A 1 110 ARG 110 110 110 ARG ARG A . n A 1 111 VAL 111 111 111 VAL VAL A . n A 1 112 PRO 112 112 112 PRO PRO A . n A 1 113 ASN 113 113 113 ASN ASN A . n A 1 114 LEU 114 114 114 LEU LEU A . n A 1 115 VAL 115 115 115 VAL VAL A . n A 1 116 PHE 116 116 116 PHE PHE A . n A 1 117 VAL 117 117 117 VAL VAL A . n A 1 118 HIS 118 118 118 HIS HIS A . n A 1 119 ILE 119 119 119 ILE ILE A . n A 1 120 PRO 120 120 120 PRO PRO A . n A 1 121 ARG 121 121 121 ARG ARG A . n A 1 122 GLU 122 122 122 GLU GLU A . n A 1 123 LYS 123 123 123 LYS LYS A . n A 1 124 ASN 124 124 124 ASN ASN A . n A 1 125 ALA 125 125 125 ALA ALA A . n A 1 126 ARG 126 126 126 ARG ARG A . n A 1 127 ALA 127 127 127 ALA ALA A . n A 1 128 ASP 128 128 128 ASP ASP A . n A 1 129 GLU 129 129 129 GLU GLU A . n A 1 130 LEU 130 130 130 LEU LEU A . n A 1 131 VAL 131 131 131 VAL VAL A . n A 1 132 ASN 132 132 132 ASN ASN A . n A 1 133 GLU 133 133 133 GLU GLU A . n A 1 134 ALA 134 134 134 ALA ALA A . n A 1 135 ILE 135 135 135 ILE ILE A . n A 1 136 ASP 136 136 136 ASP ASP A . n A 1 137 LYS 137 137 137 LYS LYS A . n A 1 138 ALA 138 138 138 ALA ALA A . n A 1 139 LEU 139 139 139 LEU LEU A . n A 1 140 SER 140 140 140 SER SER A . n B 1 1 MET 1 1 ? ? ? B . n B 1 2 ASN 2 2 ? ? ? B . n B 1 3 LYS 3 3 3 LYS LYS B . n B 1 4 ILE 4 4 4 ILE ILE B . n B 1 5 ILE 5 5 5 ILE ILE B . n B 1 6 ILE 6 6 6 ILE ILE B . n B 1 7 TYR 7 7 7 TYR TYR B . n B 1 8 THR 8 8 8 THR THR B . n B 1 9 ASP 9 9 9 ASP ASP B . n B 1 10 GLY 10 10 10 GLY GLY B . n B 1 11 GLY 11 11 11 GLY GLY B . n B 1 12 ALA 12 12 12 ALA ALA B . n B 1 13 ARG 13 13 13 ARG ARG B . n B 1 14 GLY 14 14 14 GLY GLY B . n B 1 15 ASN 15 15 15 ASN ASN B . n B 1 16 PRO 16 16 16 PRO PRO B . n B 1 17 GLY 17 17 17 GLY GLY B . n B 1 18 PRO 18 18 18 PRO PRO B . n B 1 19 ALA 19 19 19 ALA ALA B . n B 1 20 GLY 20 20 20 GLY GLY B . n B 1 21 ILE 21 21 21 ILE ILE B . n B 1 22 GLY 22 22 22 GLY GLY B . n B 1 23 VAL 23 23 23 VAL VAL B . n B 1 24 VAL 24 24 24 VAL VAL B . n B 1 25 ILE 25 25 25 ILE ILE B . n B 1 26 THR 26 26 26 THR THR B . n B 1 27 ASP 27 27 27 ASP ASP B . n B 1 28 GLU 28 28 28 GLU GLU B . n B 1 29 LYS 29 29 29 LYS LYS B . n B 1 30 GLY 30 30 30 GLY GLY B . n B 1 31 ASN 31 31 31 ASN ASN B . n B 1 32 THR 32 32 32 THR THR B . n B 1 33 LEU 33 33 33 LEU LEU B . n B 1 34 HIS 34 34 34 HIS HIS B . n B 1 35 GLU 35 35 35 GLU GLU B . n B 1 36 SER 36 36 36 SER SER B . n B 1 37 SER 37 37 37 SER SER B . n B 1 38 ALA 38 38 38 ALA ALA B . n B 1 39 TYR 39 39 39 TYR TYR B . n B 1 40 ILE 40 40 40 ILE ILE B . n B 1 41 GLY 41 41 41 GLY GLY B . n B 1 42 GLU 42 42 42 GLU GLU B . n B 1 43 THR 43 43 43 THR THR B . n B 1 44 THR 44 44 44 THR THR B . n B 1 45 ASN 45 45 45 ASN ASN B . n B 1 46 ASN 46 46 46 ASN ASN B . n B 1 47 VAL 47 47 47 VAL VAL B . n B 1 48 ALA 48 48 48 ALA ALA B . n B 1 49 GLU 49 49 49 GLU GLU B . n B 1 50 TYR 50 50 50 TYR TYR B . n B 1 51 GLU 51 51 51 GLU GLU B . n B 1 52 ALA 52 52 52 ALA ALA B . n B 1 53 LEU 53 53 53 LEU LEU B . n B 1 54 ILE 54 54 54 ILE ILE B . n B 1 55 ARG 55 55 55 ARG ARG B . n B 1 56 ALA 56 56 56 ALA ALA B . n B 1 57 LEU 57 57 57 LEU LEU B . n B 1 58 GLU 58 58 58 GLU GLU B . n B 1 59 ASP 59 59 59 ASP ASP B . n B 1 60 LEU 60 60 60 LEU LEU B . n B 1 61 GLN 61 61 61 GLN GLN B . n B 1 62 MET 62 62 62 MET MET B . n B 1 63 PHE 63 63 63 PHE PHE B . n B 1 64 GLY 64 64 64 GLY GLY B . n B 1 65 ASP 65 65 65 ASP ASP B . n B 1 66 LYS 66 66 66 LYS LYS B . n B 1 67 LEU 67 67 67 LEU LEU B . n B 1 68 VAL 68 68 68 VAL VAL B . n B 1 69 ASP 69 69 69 ASP ASP B . n B 1 70 MET 70 70 70 MET MET B . n B 1 71 GLU 71 71 71 GLU GLU B . n B 1 72 VAL 72 72 72 VAL VAL B . n B 1 73 GLU 73 73 73 GLU GLU B . n B 1 74 VAL 74 74 74 VAL VAL B . n B 1 75 ARG 75 75 75 ARG ARG B . n B 1 76 MET 76 76 76 MET MET B . n B 1 77 ASN 77 77 77 ASN ASN B . n B 1 78 SER 78 78 78 SER SER B . n B 1 79 GLU 79 79 79 GLU GLU B . n B 1 80 LEU 80 80 80 LEU LEU B . n B 1 81 ILE 81 81 81 ILE ILE B . n B 1 82 VAL 82 82 82 VAL VAL B . n B 1 83 ARG 83 83 83 ARG ARG B . n B 1 84 GLN 84 84 84 GLN GLN B . n B 1 85 MET 85 85 85 MET MET B . n B 1 86 GLN 86 86 86 GLN GLN B . n B 1 87 GLY 87 87 87 GLY GLY B . n B 1 88 VAL 88 88 88 VAL VAL B . n B 1 89 TYR 89 89 89 TYR TYR B . n B 1 90 LYS 90 90 90 LYS LYS B . n B 1 91 VAL 91 91 91 VAL VAL B . n B 1 92 LYS 92 92 92 LYS LYS B . n B 1 93 GLU 93 93 93 GLU GLU B . n B 1 94 PRO 94 94 94 PRO PRO B . n B 1 95 THR 95 95 95 THR THR B . n B 1 96 LEU 96 96 96 LEU LEU B . n B 1 97 LYS 97 97 97 LYS LYS B . n B 1 98 GLU 98 98 98 GLU GLU B . n B 1 99 LYS 99 99 99 LYS LYS B . n B 1 100 PHE 100 100 100 PHE PHE B . n B 1 101 ALA 101 101 101 ALA ALA B . n B 1 102 LYS 102 102 102 LYS LYS B . n B 1 103 ILE 103 103 103 ILE ILE B . n B 1 104 ALA 104 104 104 ALA ALA B . n B 1 105 HIS 105 105 105 HIS HIS B . n B 1 106 ILE 106 106 106 ILE ILE B . n B 1 107 LYS 107 107 107 LYS LYS B . n B 1 108 MET 108 108 108 MET MET B . n B 1 109 GLU 109 109 109 GLU GLU B . n B 1 110 ARG 110 110 110 ARG ARG B . n B 1 111 VAL 111 111 111 VAL VAL B . n B 1 112 PRO 112 112 112 PRO PRO B . n B 1 113 ASN 113 113 113 ASN ASN B . n B 1 114 LEU 114 114 114 LEU LEU B . n B 1 115 VAL 115 115 115 VAL VAL B . n B 1 116 PHE 116 116 116 PHE PHE B . n B 1 117 VAL 117 117 117 VAL VAL B . n B 1 118 HIS 118 118 118 HIS HIS B . n B 1 119 ILE 119 119 119 ILE ILE B . n B 1 120 PRO 120 120 120 PRO PRO B . n B 1 121 ARG 121 121 121 ARG ARG B . n B 1 122 GLU 122 122 122 GLU GLU B . n B 1 123 LYS 123 123 123 LYS LYS B . n B 1 124 ASN 124 124 124 ASN ASN B . n B 1 125 ALA 125 125 125 ALA ALA B . n B 1 126 ARG 126 126 126 ARG ARG B . n B 1 127 ALA 127 127 127 ALA ALA B . n B 1 128 ASP 128 128 128 ASP ASP B . n B 1 129 GLU 129 129 129 GLU GLU B . n B 1 130 LEU 130 130 130 LEU LEU B . n B 1 131 VAL 131 131 131 VAL VAL B . n B 1 132 ASN 132 132 132 ASN ASN B . n B 1 133 GLU 133 133 133 GLU GLU B . n B 1 134 ALA 134 134 134 ALA ALA B . n B 1 135 ILE 135 135 135 ILE ILE B . n B 1 136 ASP 136 136 136 ASP ASP B . n B 1 137 LYS 137 137 137 LYS LYS B . n B 1 138 ALA 138 138 138 ALA ALA B . n B 1 139 LEU 139 139 139 LEU LEU B . n B 1 140 SER 140 140 140 SER SER B . n C 2 1 C 1 1 1 C C C . n C 2 2 G 2 2 2 G G C . n C 2 3 A 3 3 3 A A C . n C 2 4 C 4 4 4 C C C . n C 2 5 A 5 5 5 A A C . n C 2 6 C 6 6 6 C C C . n C 2 7 C 7 7 7 C C C . n C 2 8 U 8 8 8 U U C . n C 2 9 G 9 9 9 G G C . n C 2 10 A 10 10 10 A A C . n C 2 11 U 11 11 11 U U C . n C 2 12 U 12 12 12 U U C . n C 2 13 C 13 13 13 C C C . n C 2 14 C 14 14 14 C C C . n D 3 1 DG 1 1 1 DG DG D . n D 3 2 DG 2 2 2 DG DG D . n D 3 3 DA 3 3 3 DA DA D . n D 3 4 DA 4 4 4 DA DA D . n D 3 5 DT 5 5 5 DT DT D . n D 3 6 DC 6 6 6 DC DC D . n D 3 7 DA 7 7 7 DA DA D . n D 3 8 DG 8 8 8 DG DG D . n D 3 9 DG 9 9 9 DG DG D . n D 3 10 DT 10 10 10 DT DT D . n D 3 11 DG 11 11 11 DG DG D . n D 3 12 DT 12 12 12 DT DT D . n D 3 13 DC 13 13 13 DC DC D . n D 3 14 DG 14 14 14 DG DG D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 HOH 1 201 5 HOH HOH A . E 4 HOH 2 202 7 HOH HOH A . E 4 HOH 3 203 9 HOH HOH A . E 4 HOH 4 204 27 HOH HOH A . E 4 HOH 5 205 34 HOH HOH A . E 4 HOH 6 206 41 HOH HOH A . E 4 HOH 7 207 42 HOH HOH A . E 4 HOH 8 208 45 HOH HOH A . E 4 HOH 9 209 48 HOH HOH A . E 4 HOH 10 210 49 HOH HOH A . E 4 HOH 11 211 50 HOH HOH A . E 4 HOH 12 212 51 HOH HOH A . E 4 HOH 13 213 53 HOH HOH A . E 4 HOH 14 214 58 HOH HOH A . E 4 HOH 15 215 59 HOH HOH A . E 4 HOH 16 216 61 HOH HOH A . E 4 HOH 17 217 66 HOH HOH A . E 4 HOH 18 218 70 HOH HOH A . E 4 HOH 19 219 76 HOH HOH A . E 4 HOH 20 220 79 HOH HOH A . E 4 HOH 21 221 83 HOH HOH A . E 4 HOH 22 222 89 HOH HOH A . E 4 HOH 23 223 95 HOH HOH A . E 4 HOH 24 224 65 HOH HOH A . F 4 HOH 1 201 1 HOH HOH B . F 4 HOH 2 202 2 HOH HOH B . F 4 HOH 3 203 13 HOH HOH B . F 4 HOH 4 204 14 HOH HOH B . F 4 HOH 5 205 16 HOH HOH B . F 4 HOH 6 206 20 HOH HOH B . F 4 HOH 7 207 21 HOH HOH B . F 4 HOH 8 208 22 HOH HOH B . F 4 HOH 9 209 23 HOH HOH B . F 4 HOH 10 210 24 HOH HOH B . F 4 HOH 11 211 26 HOH HOH B . F 4 HOH 12 212 29 HOH HOH B . F 4 HOH 13 213 30 HOH HOH B . F 4 HOH 14 214 32 HOH HOH B . F 4 HOH 15 215 33 HOH HOH B . F 4 HOH 16 216 36 HOH HOH B . F 4 HOH 17 217 37 HOH HOH B . F 4 HOH 18 218 38 HOH HOH B . F 4 HOH 19 219 39 HOH HOH B . F 4 HOH 20 220 43 HOH HOH B . F 4 HOH 21 221 44 HOH HOH B . F 4 HOH 22 222 46 HOH HOH B . F 4 HOH 23 223 54 HOH HOH B . F 4 HOH 24 224 55 HOH HOH B . F 4 HOH 25 225 56 HOH HOH B . F 4 HOH 26 226 60 HOH HOH B . F 4 HOH 27 227 64 HOH HOH B . F 4 HOH 28 228 68 HOH HOH B . F 4 HOH 29 229 69 HOH HOH B . F 4 HOH 30 230 78 HOH HOH B . F 4 HOH 31 231 84 HOH HOH B . F 4 HOH 32 232 90 HOH HOH B . F 4 HOH 33 233 92 HOH HOH B . F 4 HOH 34 234 93 HOH HOH B . F 4 HOH 35 235 94 HOH HOH B . G 4 HOH 1 101 4 HOH HOH C . G 4 HOH 2 102 6 HOH HOH C . G 4 HOH 3 103 10 HOH HOH C . G 4 HOH 4 104 11 HOH HOH C . G 4 HOH 5 105 15 HOH HOH C . G 4 HOH 6 106 35 HOH HOH C . G 4 HOH 7 107 52 HOH HOH C . G 4 HOH 8 108 62 HOH HOH C . G 4 HOH 9 109 67 HOH HOH C . G 4 HOH 10 110 71 HOH HOH C . G 4 HOH 11 111 72 HOH HOH C . G 4 HOH 12 112 77 HOH HOH C . G 4 HOH 13 113 80 HOH HOH C . G 4 HOH 14 114 91 HOH HOH C . H 4 HOH 1 101 3 HOH HOH D . H 4 HOH 2 102 8 HOH HOH D . H 4 HOH 3 103 12 HOH HOH D . H 4 HOH 4 104 17 HOH HOH D . H 4 HOH 5 105 19 HOH HOH D . H 4 HOH 6 106 25 HOH HOH D . H 4 HOH 7 107 28 HOH HOH D . H 4 HOH 8 108 31 HOH HOH D . H 4 HOH 9 109 40 HOH HOH D . H 4 HOH 10 110 47 HOH HOH D . H 4 HOH 11 111 57 HOH HOH D . H 4 HOH 12 112 63 HOH HOH D . H 4 HOH 13 113 74 HOH HOH D . H 4 HOH 14 114 75 HOH HOH D . H 4 HOH 15 115 81 HOH HOH D . H 4 HOH 16 116 82 HOH HOH D . H 4 HOH 17 117 85 HOH HOH D . H 4 HOH 18 118 86 HOH HOH D . H 4 HOH 19 119 88 HOH HOH D . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5020 ? 1 MORE -45 ? 1 'SSA (A^2)' 16470 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-09-25 2 'Structure model' 1 1 2023-11-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_initial_refinement_model 5 2 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_struct_ref_seq_dif.details' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 MOLREP phasing . ? 2 REFMAC refinement 5.5.0109 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 N B LYS 3 ? ? CE B MET 70 ? ? 1.77 2 1 CB B PHE 63 ? ? O B HOH 205 ? ? 1.98 3 1 O B PHE 63 ? ? CD1 B LEU 67 ? ? 2.09 4 1 O A GLN 61 ? ? N A GLY 64 ? ? 2.17 5 1 CG B GLN 61 ? ? OD2 B ASP 65 ? ? 2.18 6 1 OE1 A GLU 122 ? ? O A HOH 221 ? ? 2.19 7 1 O A GLN 61 ? ? N A PHE 63 ? ? 2.19 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" D DG 1 ? ? "C1'" D DG 1 ? ? N9 D DG 1 ? ? 110.18 108.30 1.88 0.30 N 2 1 "O4'" D DA 3 ? ? "C1'" D DA 3 ? ? N9 D DA 3 ? ? 111.72 108.30 3.42 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 MET A 62 ? ? -59.11 -1.99 2 1 LYS A 66 ? ? -137.20 -31.14 3 1 ASP A 69 ? ? 81.79 35.93 4 1 ASN B 15 ? ? 41.90 73.95 5 1 PHE B 63 ? ? -90.37 37.91 6 1 LYS B 66 ? ? -131.48 -32.26 7 1 VAL B 68 ? ? -164.68 -162.45 8 1 ASP B 69 ? ? 88.68 0.12 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A ASN 2 ? A ASN 2 3 1 Y 1 B MET 1 ? B MET 1 4 1 Y 1 B ASN 2 ? B ASN 2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 C OP3 O N N 111 C P P N N 112 C OP1 O N N 113 C OP2 O N N 114 C "O5'" O N N 115 C "C5'" C N N 116 C "C4'" C N R 117 C "O4'" O N N 118 C "C3'" C N S 119 C "O3'" O N N 120 C "C2'" C N R 121 C "O2'" O N N 122 C "C1'" C N R 123 C N1 N N N 124 C C2 C N N 125 C O2 O N N 126 C N3 N N N 127 C C4 C N N 128 C N4 N N N 129 C C5 C N N 130 C C6 C N N 131 C HOP3 H N N 132 C HOP2 H N N 133 C "H5'" H N N 134 C "H5''" H N N 135 C "H4'" H N N 136 C "H3'" H N N 137 C "HO3'" H N N 138 C "H2'" H N N 139 C "HO2'" H N N 140 C "H1'" H N N 141 C H41 H N N 142 C H42 H N N 143 C H5 H N N 144 C H6 H N N 145 DA OP3 O N N 146 DA P P N N 147 DA OP1 O N N 148 DA OP2 O N N 149 DA "O5'" O N N 150 DA "C5'" C N N 151 DA "C4'" C N R 152 DA "O4'" O N N 153 DA "C3'" C N S 154 DA "O3'" O N N 155 DA "C2'" C N N 156 DA "C1'" C N R 157 DA N9 N Y N 158 DA C8 C Y N 159 DA N7 N Y N 160 DA C5 C Y N 161 DA C6 C Y N 162 DA N6 N N N 163 DA N1 N Y N 164 DA C2 C Y N 165 DA N3 N Y N 166 DA C4 C Y N 167 DA HOP3 H N N 168 DA HOP2 H N N 169 DA "H5'" H N N 170 DA "H5''" H N N 171 DA "H4'" H N N 172 DA "H3'" H N N 173 DA "HO3'" H N N 174 DA "H2'" H N N 175 DA "H2''" H N N 176 DA "H1'" H N N 177 DA H8 H N N 178 DA H61 H N N 179 DA H62 H N N 180 DA H2 H N N 181 DC OP3 O N N 182 DC P P N N 183 DC OP1 O N N 184 DC OP2 O N N 185 DC "O5'" O N N 186 DC "C5'" C N N 187 DC "C4'" C N R 188 DC "O4'" O N N 189 DC "C3'" C N S 190 DC "O3'" O N N 191 DC "C2'" C N N 192 DC "C1'" C N R 193 DC N1 N N N 194 DC C2 C N N 195 DC O2 O N N 196 DC N3 N N N 197 DC C4 C N N 198 DC N4 N N N 199 DC C5 C N N 200 DC C6 C N N 201 DC HOP3 H N N 202 DC HOP2 H N N 203 DC "H5'" H N N 204 DC "H5''" H N N 205 DC "H4'" H N N 206 DC "H3'" H N N 207 DC "HO3'" H N N 208 DC "H2'" H N N 209 DC "H2''" H N N 210 DC "H1'" H N N 211 DC H41 H N N 212 DC H42 H N N 213 DC H5 H N N 214 DC H6 H N N 215 DG OP3 O N N 216 DG P P N N 217 DG OP1 O N N 218 DG OP2 O N N 219 DG "O5'" O N N 220 DG "C5'" C N N 221 DG "C4'" C N R 222 DG "O4'" O N N 223 DG "C3'" C N S 224 DG "O3'" O N N 225 DG "C2'" C N N 226 DG "C1'" C N R 227 DG N9 N Y N 228 DG C8 C Y N 229 DG N7 N Y N 230 DG C5 C Y N 231 DG C6 C N N 232 DG O6 O N N 233 DG N1 N N N 234 DG C2 C N N 235 DG N2 N N N 236 DG N3 N N N 237 DG C4 C Y N 238 DG HOP3 H N N 239 DG HOP2 H N N 240 DG "H5'" H N N 241 DG "H5''" H N N 242 DG "H4'" H N N 243 DG "H3'" H N N 244 DG "HO3'" H N N 245 DG "H2'" H N N 246 DG "H2''" H N N 247 DG "H1'" H N N 248 DG H8 H N N 249 DG H1 H N N 250 DG H21 H N N 251 DG H22 H N N 252 DT OP3 O N N 253 DT P P N N 254 DT OP1 O N N 255 DT OP2 O N N 256 DT "O5'" O N N 257 DT "C5'" C N N 258 DT "C4'" C N R 259 DT "O4'" O N N 260 DT "C3'" C N S 261 DT "O3'" O N N 262 DT "C2'" C N N 263 DT "C1'" C N R 264 DT N1 N N N 265 DT C2 C N N 266 DT O2 O N N 267 DT N3 N N N 268 DT C4 C N N 269 DT O4 O N N 270 DT C5 C N N 271 DT C7 C N N 272 DT C6 C N N 273 DT HOP3 H N N 274 DT HOP2 H N N 275 DT "H5'" H N N 276 DT "H5''" H N N 277 DT "H4'" H N N 278 DT "H3'" H N N 279 DT "HO3'" H N N 280 DT "H2'" H N N 281 DT "H2''" H N N 282 DT "H1'" H N N 283 DT H3 H N N 284 DT H71 H N N 285 DT H72 H N N 286 DT H73 H N N 287 DT H6 H N N 288 G OP3 O N N 289 G P P N N 290 G OP1 O N N 291 G OP2 O N N 292 G "O5'" O N N 293 G "C5'" C N N 294 G "C4'" C N R 295 G "O4'" O N N 296 G "C3'" C N S 297 G "O3'" O N N 298 G "C2'" C N R 299 G "O2'" O N N 300 G "C1'" C N R 301 G N9 N Y N 302 G C8 C Y N 303 G N7 N Y N 304 G C5 C Y N 305 G C6 C N N 306 G O6 O N N 307 G N1 N N N 308 G C2 C N N 309 G N2 N N N 310 G N3 N N N 311 G C4 C Y N 312 G HOP3 H N N 313 G HOP2 H N N 314 G "H5'" H N N 315 G "H5''" H N N 316 G "H4'" H N N 317 G "H3'" H N N 318 G "HO3'" H N N 319 G "H2'" H N N 320 G "HO2'" H N N 321 G "H1'" H N N 322 G H8 H N N 323 G H1 H N N 324 G H21 H N N 325 G H22 H N N 326 GLN N N N N 327 GLN CA C N S 328 GLN C C N N 329 GLN O O N N 330 GLN CB C N N 331 GLN CG C N N 332 GLN CD C N N 333 GLN OE1 O N N 334 GLN NE2 N N N 335 GLN OXT O N N 336 GLN H H N N 337 GLN H2 H N N 338 GLN HA H N N 339 GLN HB2 H N N 340 GLN HB3 H N N 341 GLN HG2 H N N 342 GLN HG3 H N N 343 GLN HE21 H N N 344 GLN HE22 H N N 345 GLN HXT H N N 346 GLU N N N N 347 GLU CA C N S 348 GLU C C N N 349 GLU O O N N 350 GLU CB C N N 351 GLU CG C N N 352 GLU CD C N N 353 GLU OE1 O N N 354 GLU OE2 O N N 355 GLU OXT O N N 356 GLU H H N N 357 GLU H2 H N N 358 GLU HA H N N 359 GLU HB2 H N N 360 GLU HB3 H N N 361 GLU HG2 H N N 362 GLU HG3 H N N 363 GLU HE2 H N N 364 GLU HXT H N N 365 GLY N N N N 366 GLY CA C N N 367 GLY C C N N 368 GLY O O N N 369 GLY OXT O N N 370 GLY H H N N 371 GLY H2 H N N 372 GLY HA2 H N N 373 GLY HA3 H N N 374 GLY HXT H N N 375 HIS N N N N 376 HIS CA C N S 377 HIS C C N N 378 HIS O O N N 379 HIS CB C N N 380 HIS CG C Y N 381 HIS ND1 N Y N 382 HIS CD2 C Y N 383 HIS CE1 C Y N 384 HIS NE2 N Y N 385 HIS OXT O N N 386 HIS H H N N 387 HIS H2 H N N 388 HIS HA H N N 389 HIS HB2 H N N 390 HIS HB3 H N N 391 HIS HD1 H N N 392 HIS HD2 H N N 393 HIS HE1 H N N 394 HIS HE2 H N N 395 HIS HXT H N N 396 HOH O O N N 397 HOH H1 H N N 398 HOH H2 H N N 399 ILE N N N N 400 ILE CA C N S 401 ILE C C N N 402 ILE O O N N 403 ILE CB C N S 404 ILE CG1 C N N 405 ILE CG2 C N N 406 ILE CD1 C N N 407 ILE OXT O N N 408 ILE H H N N 409 ILE H2 H N N 410 ILE HA H N N 411 ILE HB H N N 412 ILE HG12 H N N 413 ILE HG13 H N N 414 ILE HG21 H N N 415 ILE HG22 H N N 416 ILE HG23 H N N 417 ILE HD11 H N N 418 ILE HD12 H N N 419 ILE HD13 H N N 420 ILE HXT H N N 421 LEU N N N N 422 LEU CA C N S 423 LEU C C N N 424 LEU O O N N 425 LEU CB C N N 426 LEU CG C N N 427 LEU CD1 C N N 428 LEU CD2 C N N 429 LEU OXT O N N 430 LEU H H N N 431 LEU H2 H N N 432 LEU HA H N N 433 LEU HB2 H N N 434 LEU HB3 H N N 435 LEU HG H N N 436 LEU HD11 H N N 437 LEU HD12 H N N 438 LEU HD13 H N N 439 LEU HD21 H N N 440 LEU HD22 H N N 441 LEU HD23 H N N 442 LEU HXT H N N 443 LYS N N N N 444 LYS CA C N S 445 LYS C C N N 446 LYS O O N N 447 LYS CB C N N 448 LYS CG C N N 449 LYS CD C N N 450 LYS CE C N N 451 LYS NZ N N N 452 LYS OXT O N N 453 LYS H H N N 454 LYS H2 H N N 455 LYS HA H N N 456 LYS HB2 H N N 457 LYS HB3 H N N 458 LYS HG2 H N N 459 LYS HG3 H N N 460 LYS HD2 H N N 461 LYS HD3 H N N 462 LYS HE2 H N N 463 LYS HE3 H N N 464 LYS HZ1 H N N 465 LYS HZ2 H N N 466 LYS HZ3 H N N 467 LYS HXT H N N 468 MET N N N N 469 MET CA C N S 470 MET C C N N 471 MET O O N N 472 MET CB C N N 473 MET CG C N N 474 MET SD S N N 475 MET CE C N N 476 MET OXT O N N 477 MET H H N N 478 MET H2 H N N 479 MET HA H N N 480 MET HB2 H N N 481 MET HB3 H N N 482 MET HG2 H N N 483 MET HG3 H N N 484 MET HE1 H N N 485 MET HE2 H N N 486 MET HE3 H N N 487 MET HXT H N N 488 PHE N N N N 489 PHE CA C N S 490 PHE C C N N 491 PHE O O N N 492 PHE CB C N N 493 PHE CG C Y N 494 PHE CD1 C Y N 495 PHE CD2 C Y N 496 PHE CE1 C Y N 497 PHE CE2 C Y N 498 PHE CZ C Y N 499 PHE OXT O N N 500 PHE H H N N 501 PHE H2 H N N 502 PHE HA H N N 503 PHE HB2 H N N 504 PHE HB3 H N N 505 PHE HD1 H N N 506 PHE HD2 H N N 507 PHE HE1 H N N 508 PHE HE2 H N N 509 PHE HZ H N N 510 PHE HXT H N N 511 PRO N N N N 512 PRO CA C N S 513 PRO C C N N 514 PRO O O N N 515 PRO CB C N N 516 PRO CG C N N 517 PRO CD C N N 518 PRO OXT O N N 519 PRO H H N N 520 PRO HA H N N 521 PRO HB2 H N N 522 PRO HB3 H N N 523 PRO HG2 H N N 524 PRO HG3 H N N 525 PRO HD2 H N N 526 PRO HD3 H N N 527 PRO HXT H N N 528 SER N N N N 529 SER CA C N S 530 SER C C N N 531 SER O O N N 532 SER CB C N N 533 SER OG O N N 534 SER OXT O N N 535 SER H H N N 536 SER H2 H N N 537 SER HA H N N 538 SER HB2 H N N 539 SER HB3 H N N 540 SER HG H N N 541 SER HXT H N N 542 THR N N N N 543 THR CA C N S 544 THR C C N N 545 THR O O N N 546 THR CB C N R 547 THR OG1 O N N 548 THR CG2 C N N 549 THR OXT O N N 550 THR H H N N 551 THR H2 H N N 552 THR HA H N N 553 THR HB H N N 554 THR HG1 H N N 555 THR HG21 H N N 556 THR HG22 H N N 557 THR HG23 H N N 558 THR HXT H N N 559 TYR N N N N 560 TYR CA C N S 561 TYR C C N N 562 TYR O O N N 563 TYR CB C N N 564 TYR CG C Y N 565 TYR CD1 C Y N 566 TYR CD2 C Y N 567 TYR CE1 C Y N 568 TYR CE2 C Y N 569 TYR CZ C Y N 570 TYR OH O N N 571 TYR OXT O N N 572 TYR H H N N 573 TYR H2 H N N 574 TYR HA H N N 575 TYR HB2 H N N 576 TYR HB3 H N N 577 TYR HD1 H N N 578 TYR HD2 H N N 579 TYR HE1 H N N 580 TYR HE2 H N N 581 TYR HH H N N 582 TYR HXT H N N 583 U OP3 O N N 584 U P P N N 585 U OP1 O N N 586 U OP2 O N N 587 U "O5'" O N N 588 U "C5'" C N N 589 U "C4'" C N R 590 U "O4'" O N N 591 U "C3'" C N S 592 U "O3'" O N N 593 U "C2'" C N R 594 U "O2'" O N N 595 U "C1'" C N R 596 U N1 N N N 597 U C2 C N N 598 U O2 O N N 599 U N3 N N N 600 U C4 C N N 601 U O4 O N N 602 U C5 C N N 603 U C6 C N N 604 U HOP3 H N N 605 U HOP2 H N N 606 U "H5'" H N N 607 U "H5''" H N N 608 U "H4'" H N N 609 U "H3'" H N N 610 U "HO3'" H N N 611 U "H2'" H N N 612 U "HO2'" H N N 613 U "H1'" H N N 614 U H3 H N N 615 U H5 H N N 616 U H6 H N N 617 VAL N N N N 618 VAL CA C N S 619 VAL C C N N 620 VAL O O N N 621 VAL CB C N N 622 VAL CG1 C N N 623 VAL CG2 C N N 624 VAL OXT O N N 625 VAL H H N N 626 VAL H2 H N N 627 VAL HA H N N 628 VAL HB H N N 629 VAL HG11 H N N 630 VAL HG12 H N N 631 VAL HG13 H N N 632 VAL HG21 H N N 633 VAL HG22 H N N 634 VAL HG23 H N N 635 VAL HXT H N N 636 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 C OP3 P sing N N 109 C OP3 HOP3 sing N N 110 C P OP1 doub N N 111 C P OP2 sing N N 112 C P "O5'" sing N N 113 C OP2 HOP2 sing N N 114 C "O5'" "C5'" sing N N 115 C "C5'" "C4'" sing N N 116 C "C5'" "H5'" sing N N 117 C "C5'" "H5''" sing N N 118 C "C4'" "O4'" sing N N 119 C "C4'" "C3'" sing N N 120 C "C4'" "H4'" sing N N 121 C "O4'" "C1'" sing N N 122 C "C3'" "O3'" sing N N 123 C "C3'" "C2'" sing N N 124 C "C3'" "H3'" sing N N 125 C "O3'" "HO3'" sing N N 126 C "C2'" "O2'" sing N N 127 C "C2'" "C1'" sing N N 128 C "C2'" "H2'" sing N N 129 C "O2'" "HO2'" sing N N 130 C "C1'" N1 sing N N 131 C "C1'" "H1'" sing N N 132 C N1 C2 sing N N 133 C N1 C6 sing N N 134 C C2 O2 doub N N 135 C C2 N3 sing N N 136 C N3 C4 doub N N 137 C C4 N4 sing N N 138 C C4 C5 sing N N 139 C N4 H41 sing N N 140 C N4 H42 sing N N 141 C C5 C6 doub N N 142 C C5 H5 sing N N 143 C C6 H6 sing N N 144 DA OP3 P sing N N 145 DA OP3 HOP3 sing N N 146 DA P OP1 doub N N 147 DA P OP2 sing N N 148 DA P "O5'" sing N N 149 DA OP2 HOP2 sing N N 150 DA "O5'" "C5'" sing N N 151 DA "C5'" "C4'" sing N N 152 DA "C5'" "H5'" sing N N 153 DA "C5'" "H5''" sing N N 154 DA "C4'" "O4'" sing N N 155 DA "C4'" "C3'" sing N N 156 DA "C4'" "H4'" sing N N 157 DA "O4'" "C1'" sing N N 158 DA "C3'" "O3'" sing N N 159 DA "C3'" "C2'" sing N N 160 DA "C3'" "H3'" sing N N 161 DA "O3'" "HO3'" sing N N 162 DA "C2'" "C1'" sing N N 163 DA "C2'" "H2'" sing N N 164 DA "C2'" "H2''" sing N N 165 DA "C1'" N9 sing N N 166 DA "C1'" "H1'" sing N N 167 DA N9 C8 sing Y N 168 DA N9 C4 sing Y N 169 DA C8 N7 doub Y N 170 DA C8 H8 sing N N 171 DA N7 C5 sing Y N 172 DA C5 C6 sing Y N 173 DA C5 C4 doub Y N 174 DA C6 N6 sing N N 175 DA C6 N1 doub Y N 176 DA N6 H61 sing N N 177 DA N6 H62 sing N N 178 DA N1 C2 sing Y N 179 DA C2 N3 doub Y N 180 DA C2 H2 sing N N 181 DA N3 C4 sing Y N 182 DC OP3 P sing N N 183 DC OP3 HOP3 sing N N 184 DC P OP1 doub N N 185 DC P OP2 sing N N 186 DC P "O5'" sing N N 187 DC OP2 HOP2 sing N N 188 DC "O5'" "C5'" sing N N 189 DC "C5'" "C4'" sing N N 190 DC "C5'" "H5'" sing N N 191 DC "C5'" "H5''" sing N N 192 DC "C4'" "O4'" sing N N 193 DC "C4'" "C3'" sing N N 194 DC "C4'" "H4'" sing N N 195 DC "O4'" "C1'" sing N N 196 DC "C3'" "O3'" sing N N 197 DC "C3'" "C2'" sing N N 198 DC "C3'" "H3'" sing N N 199 DC "O3'" "HO3'" sing N N 200 DC "C2'" "C1'" sing N N 201 DC "C2'" "H2'" sing N N 202 DC "C2'" "H2''" sing N N 203 DC "C1'" N1 sing N N 204 DC "C1'" "H1'" sing N N 205 DC N1 C2 sing N N 206 DC N1 C6 sing N N 207 DC C2 O2 doub N N 208 DC C2 N3 sing N N 209 DC N3 C4 doub N N 210 DC C4 N4 sing N N 211 DC C4 C5 sing N N 212 DC N4 H41 sing N N 213 DC N4 H42 sing N N 214 DC C5 C6 doub N N 215 DC C5 H5 sing N N 216 DC C6 H6 sing N N 217 DG OP3 P sing N N 218 DG OP3 HOP3 sing N N 219 DG P OP1 doub N N 220 DG P OP2 sing N N 221 DG P "O5'" sing N N 222 DG OP2 HOP2 sing N N 223 DG "O5'" "C5'" sing N N 224 DG "C5'" "C4'" sing N N 225 DG "C5'" "H5'" sing N N 226 DG "C5'" "H5''" sing N N 227 DG "C4'" "O4'" sing N N 228 DG "C4'" "C3'" sing N N 229 DG "C4'" "H4'" sing N N 230 DG "O4'" "C1'" sing N N 231 DG "C3'" "O3'" sing N N 232 DG "C3'" "C2'" sing N N 233 DG "C3'" "H3'" sing N N 234 DG "O3'" "HO3'" sing N N 235 DG "C2'" "C1'" sing N N 236 DG "C2'" "H2'" sing N N 237 DG "C2'" "H2''" sing N N 238 DG "C1'" N9 sing N N 239 DG "C1'" "H1'" sing N N 240 DG N9 C8 sing Y N 241 DG N9 C4 sing Y N 242 DG C8 N7 doub Y N 243 DG C8 H8 sing N N 244 DG N7 C5 sing Y N 245 DG C5 C6 sing N N 246 DG C5 C4 doub Y N 247 DG C6 O6 doub N N 248 DG C6 N1 sing N N 249 DG N1 C2 sing N N 250 DG N1 H1 sing N N 251 DG C2 N2 sing N N 252 DG C2 N3 doub N N 253 DG N2 H21 sing N N 254 DG N2 H22 sing N N 255 DG N3 C4 sing N N 256 DT OP3 P sing N N 257 DT OP3 HOP3 sing N N 258 DT P OP1 doub N N 259 DT P OP2 sing N N 260 DT P "O5'" sing N N 261 DT OP2 HOP2 sing N N 262 DT "O5'" "C5'" sing N N 263 DT "C5'" "C4'" sing N N 264 DT "C5'" "H5'" sing N N 265 DT "C5'" "H5''" sing N N 266 DT "C4'" "O4'" sing N N 267 DT "C4'" "C3'" sing N N 268 DT "C4'" "H4'" sing N N 269 DT "O4'" "C1'" sing N N 270 DT "C3'" "O3'" sing N N 271 DT "C3'" "C2'" sing N N 272 DT "C3'" "H3'" sing N N 273 DT "O3'" "HO3'" sing N N 274 DT "C2'" "C1'" sing N N 275 DT "C2'" "H2'" sing N N 276 DT "C2'" "H2''" sing N N 277 DT "C1'" N1 sing N N 278 DT "C1'" "H1'" sing N N 279 DT N1 C2 sing N N 280 DT N1 C6 sing N N 281 DT C2 O2 doub N N 282 DT C2 N3 sing N N 283 DT N3 C4 sing N N 284 DT N3 H3 sing N N 285 DT C4 O4 doub N N 286 DT C4 C5 sing N N 287 DT C5 C7 sing N N 288 DT C5 C6 doub N N 289 DT C7 H71 sing N N 290 DT C7 H72 sing N N 291 DT C7 H73 sing N N 292 DT C6 H6 sing N N 293 G OP3 P sing N N 294 G OP3 HOP3 sing N N 295 G P OP1 doub N N 296 G P OP2 sing N N 297 G P "O5'" sing N N 298 G OP2 HOP2 sing N N 299 G "O5'" "C5'" sing N N 300 G "C5'" "C4'" sing N N 301 G "C5'" "H5'" sing N N 302 G "C5'" "H5''" sing N N 303 G "C4'" "O4'" sing N N 304 G "C4'" "C3'" sing N N 305 G "C4'" "H4'" sing N N 306 G "O4'" "C1'" sing N N 307 G "C3'" "O3'" sing N N 308 G "C3'" "C2'" sing N N 309 G "C3'" "H3'" sing N N 310 G "O3'" "HO3'" sing N N 311 G "C2'" "O2'" sing N N 312 G "C2'" "C1'" sing N N 313 G "C2'" "H2'" sing N N 314 G "O2'" "HO2'" sing N N 315 G "C1'" N9 sing N N 316 G "C1'" "H1'" sing N N 317 G N9 C8 sing Y N 318 G N9 C4 sing Y N 319 G C8 N7 doub Y N 320 G C8 H8 sing N N 321 G N7 C5 sing Y N 322 G C5 C6 sing N N 323 G C5 C4 doub Y N 324 G C6 O6 doub N N 325 G C6 N1 sing N N 326 G N1 C2 sing N N 327 G N1 H1 sing N N 328 G C2 N2 sing N N 329 G C2 N3 doub N N 330 G N2 H21 sing N N 331 G N2 H22 sing N N 332 G N3 C4 sing N N 333 GLN N CA sing N N 334 GLN N H sing N N 335 GLN N H2 sing N N 336 GLN CA C sing N N 337 GLN CA CB sing N N 338 GLN CA HA sing N N 339 GLN C O doub N N 340 GLN C OXT sing N N 341 GLN CB CG sing N N 342 GLN CB HB2 sing N N 343 GLN CB HB3 sing N N 344 GLN CG CD sing N N 345 GLN CG HG2 sing N N 346 GLN CG HG3 sing N N 347 GLN CD OE1 doub N N 348 GLN CD NE2 sing N N 349 GLN NE2 HE21 sing N N 350 GLN NE2 HE22 sing N N 351 GLN OXT HXT sing N N 352 GLU N CA sing N N 353 GLU N H sing N N 354 GLU N H2 sing N N 355 GLU CA C sing N N 356 GLU CA CB sing N N 357 GLU CA HA sing N N 358 GLU C O doub N N 359 GLU C OXT sing N N 360 GLU CB CG sing N N 361 GLU CB HB2 sing N N 362 GLU CB HB3 sing N N 363 GLU CG CD sing N N 364 GLU CG HG2 sing N N 365 GLU CG HG3 sing N N 366 GLU CD OE1 doub N N 367 GLU CD OE2 sing N N 368 GLU OE2 HE2 sing N N 369 GLU OXT HXT sing N N 370 GLY N CA sing N N 371 GLY N H sing N N 372 GLY N H2 sing N N 373 GLY CA C sing N N 374 GLY CA HA2 sing N N 375 GLY CA HA3 sing N N 376 GLY C O doub N N 377 GLY C OXT sing N N 378 GLY OXT HXT sing N N 379 HIS N CA sing N N 380 HIS N H sing N N 381 HIS N H2 sing N N 382 HIS CA C sing N N 383 HIS CA CB sing N N 384 HIS CA HA sing N N 385 HIS C O doub N N 386 HIS C OXT sing N N 387 HIS CB CG sing N N 388 HIS CB HB2 sing N N 389 HIS CB HB3 sing N N 390 HIS CG ND1 sing Y N 391 HIS CG CD2 doub Y N 392 HIS ND1 CE1 doub Y N 393 HIS ND1 HD1 sing N N 394 HIS CD2 NE2 sing Y N 395 HIS CD2 HD2 sing N N 396 HIS CE1 NE2 sing Y N 397 HIS CE1 HE1 sing N N 398 HIS NE2 HE2 sing N N 399 HIS OXT HXT sing N N 400 HOH O H1 sing N N 401 HOH O H2 sing N N 402 ILE N CA sing N N 403 ILE N H sing N N 404 ILE N H2 sing N N 405 ILE CA C sing N N 406 ILE CA CB sing N N 407 ILE CA HA sing N N 408 ILE C O doub N N 409 ILE C OXT sing N N 410 ILE CB CG1 sing N N 411 ILE CB CG2 sing N N 412 ILE CB HB sing N N 413 ILE CG1 CD1 sing N N 414 ILE CG1 HG12 sing N N 415 ILE CG1 HG13 sing N N 416 ILE CG2 HG21 sing N N 417 ILE CG2 HG22 sing N N 418 ILE CG2 HG23 sing N N 419 ILE CD1 HD11 sing N N 420 ILE CD1 HD12 sing N N 421 ILE CD1 HD13 sing N N 422 ILE OXT HXT sing N N 423 LEU N CA sing N N 424 LEU N H sing N N 425 LEU N H2 sing N N 426 LEU CA C sing N N 427 LEU CA CB sing N N 428 LEU CA HA sing N N 429 LEU C O doub N N 430 LEU C OXT sing N N 431 LEU CB CG sing N N 432 LEU CB HB2 sing N N 433 LEU CB HB3 sing N N 434 LEU CG CD1 sing N N 435 LEU CG CD2 sing N N 436 LEU CG HG sing N N 437 LEU CD1 HD11 sing N N 438 LEU CD1 HD12 sing N N 439 LEU CD1 HD13 sing N N 440 LEU CD2 HD21 sing N N 441 LEU CD2 HD22 sing N N 442 LEU CD2 HD23 sing N N 443 LEU OXT HXT sing N N 444 LYS N CA sing N N 445 LYS N H sing N N 446 LYS N H2 sing N N 447 LYS CA C sing N N 448 LYS CA CB sing N N 449 LYS CA HA sing N N 450 LYS C O doub N N 451 LYS C OXT sing N N 452 LYS CB CG sing N N 453 LYS CB HB2 sing N N 454 LYS CB HB3 sing N N 455 LYS CG CD sing N N 456 LYS CG HG2 sing N N 457 LYS CG HG3 sing N N 458 LYS CD CE sing N N 459 LYS CD HD2 sing N N 460 LYS CD HD3 sing N N 461 LYS CE NZ sing N N 462 LYS CE HE2 sing N N 463 LYS CE HE3 sing N N 464 LYS NZ HZ1 sing N N 465 LYS NZ HZ2 sing N N 466 LYS NZ HZ3 sing N N 467 LYS OXT HXT sing N N 468 MET N CA sing N N 469 MET N H sing N N 470 MET N H2 sing N N 471 MET CA C sing N N 472 MET CA CB sing N N 473 MET CA HA sing N N 474 MET C O doub N N 475 MET C OXT sing N N 476 MET CB CG sing N N 477 MET CB HB2 sing N N 478 MET CB HB3 sing N N 479 MET CG SD sing N N 480 MET CG HG2 sing N N 481 MET CG HG3 sing N N 482 MET SD CE sing N N 483 MET CE HE1 sing N N 484 MET CE HE2 sing N N 485 MET CE HE3 sing N N 486 MET OXT HXT sing N N 487 PHE N CA sing N N 488 PHE N H sing N N 489 PHE N H2 sing N N 490 PHE CA C sing N N 491 PHE CA CB sing N N 492 PHE CA HA sing N N 493 PHE C O doub N N 494 PHE C OXT sing N N 495 PHE CB CG sing N N 496 PHE CB HB2 sing N N 497 PHE CB HB3 sing N N 498 PHE CG CD1 doub Y N 499 PHE CG CD2 sing Y N 500 PHE CD1 CE1 sing Y N 501 PHE CD1 HD1 sing N N 502 PHE CD2 CE2 doub Y N 503 PHE CD2 HD2 sing N N 504 PHE CE1 CZ doub Y N 505 PHE CE1 HE1 sing N N 506 PHE CE2 CZ sing Y N 507 PHE CE2 HE2 sing N N 508 PHE CZ HZ sing N N 509 PHE OXT HXT sing N N 510 PRO N CA sing N N 511 PRO N CD sing N N 512 PRO N H sing N N 513 PRO CA C sing N N 514 PRO CA CB sing N N 515 PRO CA HA sing N N 516 PRO C O doub N N 517 PRO C OXT sing N N 518 PRO CB CG sing N N 519 PRO CB HB2 sing N N 520 PRO CB HB3 sing N N 521 PRO CG CD sing N N 522 PRO CG HG2 sing N N 523 PRO CG HG3 sing N N 524 PRO CD HD2 sing N N 525 PRO CD HD3 sing N N 526 PRO OXT HXT sing N N 527 SER N CA sing N N 528 SER N H sing N N 529 SER N H2 sing N N 530 SER CA C sing N N 531 SER CA CB sing N N 532 SER CA HA sing N N 533 SER C O doub N N 534 SER C OXT sing N N 535 SER CB OG sing N N 536 SER CB HB2 sing N N 537 SER CB HB3 sing N N 538 SER OG HG sing N N 539 SER OXT HXT sing N N 540 THR N CA sing N N 541 THR N H sing N N 542 THR N H2 sing N N 543 THR CA C sing N N 544 THR CA CB sing N N 545 THR CA HA sing N N 546 THR C O doub N N 547 THR C OXT sing N N 548 THR CB OG1 sing N N 549 THR CB CG2 sing N N 550 THR CB HB sing N N 551 THR OG1 HG1 sing N N 552 THR CG2 HG21 sing N N 553 THR CG2 HG22 sing N N 554 THR CG2 HG23 sing N N 555 THR OXT HXT sing N N 556 TYR N CA sing N N 557 TYR N H sing N N 558 TYR N H2 sing N N 559 TYR CA C sing N N 560 TYR CA CB sing N N 561 TYR CA HA sing N N 562 TYR C O doub N N 563 TYR C OXT sing N N 564 TYR CB CG sing N N 565 TYR CB HB2 sing N N 566 TYR CB HB3 sing N N 567 TYR CG CD1 doub Y N 568 TYR CG CD2 sing Y N 569 TYR CD1 CE1 sing Y N 570 TYR CD1 HD1 sing N N 571 TYR CD2 CE2 doub Y N 572 TYR CD2 HD2 sing N N 573 TYR CE1 CZ doub Y N 574 TYR CE1 HE1 sing N N 575 TYR CE2 CZ sing Y N 576 TYR CE2 HE2 sing N N 577 TYR CZ OH sing N N 578 TYR OH HH sing N N 579 TYR OXT HXT sing N N 580 U OP3 P sing N N 581 U OP3 HOP3 sing N N 582 U P OP1 doub N N 583 U P OP2 sing N N 584 U P "O5'" sing N N 585 U OP2 HOP2 sing N N 586 U "O5'" "C5'" sing N N 587 U "C5'" "C4'" sing N N 588 U "C5'" "H5'" sing N N 589 U "C5'" "H5''" sing N N 590 U "C4'" "O4'" sing N N 591 U "C4'" "C3'" sing N N 592 U "C4'" "H4'" sing N N 593 U "O4'" "C1'" sing N N 594 U "C3'" "O3'" sing N N 595 U "C3'" "C2'" sing N N 596 U "C3'" "H3'" sing N N 597 U "O3'" "HO3'" sing N N 598 U "C2'" "O2'" sing N N 599 U "C2'" "C1'" sing N N 600 U "C2'" "H2'" sing N N 601 U "O2'" "HO2'" sing N N 602 U "C1'" N1 sing N N 603 U "C1'" "H1'" sing N N 604 U N1 C2 sing N N 605 U N1 C6 sing N N 606 U C2 O2 doub N N 607 U C2 N3 sing N N 608 U N3 C4 sing N N 609 U N3 H3 sing N N 610 U C4 O4 doub N N 611 U C4 C5 sing N N 612 U C5 C6 doub N N 613 U C5 H5 sing N N 614 U C6 H6 sing N N 615 VAL N CA sing N N 616 VAL N H sing N N 617 VAL N H2 sing N N 618 VAL CA C sing N N 619 VAL CA CB sing N N 620 VAL CA HA sing N N 621 VAL C O doub N N 622 VAL C OXT sing N N 623 VAL CB CG1 sing N N 624 VAL CB CG2 sing N N 625 VAL CB HB sing N N 626 VAL CG1 HG11 sing N N 627 VAL CG1 HG12 sing N N 628 VAL CG1 HG13 sing N N 629 VAL CG2 HG21 sing N N 630 VAL CG2 HG22 sing N N 631 VAL CG2 HG23 sing N N 632 VAL OXT HXT sing N N 633 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4H8K 'double helix' 4H8K 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 C C 1 1_555 D DG 14 1_555 0.356 -0.261 -0.248 -3.995 -2.682 7.304 1 C_C1:DG14_D C 1 ? D 14 ? 19 1 1 C G 2 1_555 D DC 13 1_555 -0.210 -0.124 -0.193 -10.073 -15.665 3.739 2 C_G2:DC13_D C 2 ? D 13 ? 19 1 1 C A 3 1_555 D DT 12 1_555 -0.042 -0.196 -0.099 -5.559 -13.342 -0.659 3 C_A3:DT12_D C 3 ? D 12 ? 20 1 1 C C 4 1_555 D DG 11 1_555 0.160 -0.176 0.290 -0.350 -13.707 -0.726 4 C_C4:DG11_D C 4 ? D 11 ? 19 1 1 C A 5 1_555 D DT 10 1_555 0.341 -0.203 -0.007 -6.979 -9.472 0.390 5 C_A5:DT10_D C 5 ? D 10 ? 20 1 1 C C 6 1_555 D DG 9 1_555 -0.017 -0.232 0.274 -3.351 -9.958 0.270 6 C_C6:DG9_D C 6 ? D 9 ? 19 1 1 C C 7 1_555 D DG 8 1_555 0.095 -0.188 0.004 14.890 -18.520 0.764 7 C_C7:DG8_D C 7 ? D 8 ? 19 1 1 C U 8 1_555 D DA 7 1_555 -0.034 -0.122 0.086 -1.588 -12.820 4.907 8 C_U8:DA7_D C 8 ? D 7 ? 20 1 1 C G 9 1_555 D DC 6 1_555 -0.276 -0.071 -0.092 -5.282 -10.141 2.062 9 C_G9:DC6_D C 9 ? D 6 ? 19 1 1 C A 10 1_555 D DT 5 1_555 0.384 -0.288 -0.095 -4.450 -13.765 -1.588 10 C_A10:DT5_D C 10 ? D 5 ? 20 1 1 C U 11 1_555 D DA 4 1_555 -0.137 0.126 0.235 -4.593 -7.540 8.005 11 C_U11:DA4_D C 11 ? D 4 ? 20 1 1 C U 12 1_555 D DA 3 1_555 -0.228 -0.323 0.215 -6.578 -7.810 -1.577 12 C_U12:DA3_D C 12 ? D 3 ? 20 1 1 C C 13 1_555 D DG 2 1_555 0.121 -0.303 0.071 6.875 -11.114 -3.747 13 C_C13:DG2_D C 13 ? D 2 ? 19 1 1 C C 14 1_555 D DG 1 1_555 0.625 0.050 -0.330 6.742 -2.455 6.767 14 C_C14:DG1_D C 14 ? D 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 C C 1 1_555 D DG 14 1_555 C G 2 1_555 D DC 13 1_555 -0.086 -1.699 3.459 0.799 10.959 27.586 -5.541 0.330 2.605 21.913 -1.597 29.654 1 CC_C1G2:DC13DG14_DD C 1 ? D 14 ? C 2 ? D 13 ? 1 C G 2 1_555 D DC 13 1_555 C A 3 1_555 D DT 12 1_555 -0.864 -1.102 3.210 -0.158 0.561 35.942 -1.864 1.378 3.197 0.909 0.255 35.946 2 CC_G2A3:DT12DC13_DD C 2 ? D 13 ? C 3 ? D 12 ? 1 C A 3 1_555 D DT 12 1_555 C C 4 1_555 D DG 11 1_555 -0.211 -1.090 3.303 -2.989 9.593 24.510 -4.808 -0.294 2.697 21.479 6.692 26.461 3 CC_A3C4:DG11DT12_DD C 3 ? D 12 ? C 4 ? D 11 ? 1 C C 4 1_555 D DG 11 1_555 C A 5 1_555 D DT 10 1_555 0.736 -1.533 3.348 5.021 4.671 32.184 -3.512 -0.434 3.176 8.307 -8.931 32.888 4 CC_C4A5:DT10DG11_DD C 4 ? D 11 ? C 5 ? D 10 ? 1 C A 5 1_555 D DT 10 1_555 C C 6 1_555 D DG 9 1_555 0.357 -1.691 3.308 0.974 -2.829 31.577 -2.556 -0.467 3.452 -5.184 -1.786 31.715 5 CC_A5C6:DG9DT10_DD C 5 ? D 10 ? C 6 ? D 9 ? 1 C C 6 1_555 D DG 9 1_555 C C 7 1_555 D DG 8 1_555 1.064 -2.101 2.807 4.423 4.454 12.965 -11.624 -1.024 2.207 18.381 -18.252 14.399 6 CC_C6C7:DG8DG9_DD C 6 ? D 9 ? C 7 ? D 8 ? 1 C C 7 1_555 D DG 8 1_555 C U 8 1_555 D DA 7 1_555 0.299 -1.488 3.655 -2.509 7.026 38.330 -3.139 -0.774 3.316 10.579 3.777 39.023 7 CC_C7U8:DA7DG8_DD C 7 ? D 8 ? C 8 ? D 7 ? 1 C U 8 1_555 D DA 7 1_555 C G 9 1_555 D DC 6 1_555 -0.724 -1.439 3.414 -0.841 7.227 31.777 -3.823 1.144 3.039 12.987 1.512 32.579 8 CC_U8G9:DC6DA7_DD C 8 ? D 7 ? C 9 ? D 6 ? 1 C G 9 1_555 D DC 6 1_555 C A 10 1_555 D DT 5 1_555 -0.703 -1.294 3.327 -0.686 7.072 25.501 -4.644 1.360 2.886 15.637 1.516 26.457 9 CC_G9A10:DT5DC6_DD C 9 ? D 6 ? C 10 ? D 5 ? 1 C A 10 1_555 D DT 5 1_555 C U 11 1_555 D DA 4 1_555 1.122 -1.709 3.357 2.298 0.292 28.075 -3.582 -1.748 3.418 0.600 -4.727 28.169 10 CC_A10U11:DA4DT5_DD C 10 ? D 5 ? C 11 ? D 4 ? 1 C U 11 1_555 D DA 4 1_555 C U 12 1_555 D DA 3 1_555 0.168 -1.456 3.355 4.748 -1.977 32.256 -2.232 0.560 3.425 -3.531 -8.479 32.653 11 CC_U11U12:DA3DA4_DD C 11 ? D 4 ? C 12 ? D 3 ? 1 C U 12 1_555 D DA 3 1_555 C C 13 1_555 D DG 2 1_555 1.418 -1.997 2.891 1.918 8.643 20.257 -7.792 -3.129 2.003 23.196 -5.147 22.089 12 CC_U12C13:DG2DA3_DD C 12 ? D 3 ? C 13 ? D 2 ? 1 C C 13 1_555 D DG 2 1_555 C C 14 1_555 D DG 1 1_555 0.041 -1.876 3.415 -0.958 -1.817 35.744 -2.776 -0.212 3.501 -2.958 1.559 35.801 13 CC_C13C14:DG1DG2_DD C 13 ? D 2 ? C 14 ? D 1 ? # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3U3G _pdbx_initial_refinement_model.details ? #