data_4HFV # _entry.id 4HFV # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4HFV RCSB RCSB075414 WWPDB D_1000075414 # _pdbx_database_related.db_name TargetTrack _pdbx_database_related.db_id MCSG-APC108125 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4HFV _pdbx_database_status.recvd_initial_deposition_date 2012-10-05 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Michalska, K.' 1 'Xu, X.' 2 'Cui, H.' 3 'Savchenko, A.' 4 'Joachimiak, A.' 5 'Midwest Center for Structural Genomics (MCSG)' 6 # _citation.id primary _citation.title 'Diverse mechanisms of metaeffector activity in an intracellular bacterial pathogen, Legionella pneumophila.' _citation.journal_abbrev 'Mol Syst Biol' _citation.journal_volume 12 _citation.page_first 893 _citation.page_last 893 _citation.year 2016 _citation.journal_id_ASTM ? _citation.country UK _citation.journal_id_ISSN 1744-4292 _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 27986836 _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Urbanus, M.L.' 1 primary 'Quaile, A.T.' 2 primary 'Stogios, P.J.' 3 primary 'Morar, M.' 4 primary 'Rao, C.' 5 primary 'Di Leo, R.' 6 primary 'Evdokimova, E.' 7 primary 'Lam, M.' 8 primary 'Oatway, C.' 9 primary 'Cuff, M.E.' 10 primary 'Osipiuk, J.' 11 primary 'Michalska, K.' 12 primary 'Nocek, B.P.' 13 primary 'Taipale, M.' 14 primary 'Savchenko, A.' 15 primary 'Ensminger, A.W.' 16 # _cell.entry_id 4HFV _cell.length_a 43.339 _cell.length_b 43.339 _cell.length_c 205.621 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4HFV _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Uncharacterized protein' 22213.021 1 ? ? ? ? 2 non-polymer syn 'CITRIC ACID' 192.124 1 ? ? ? ? 3 non-polymer syn 'SUCCINIC ACID' 118.088 1 ? ? ? ? 4 water nat water 18.015 197 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;G(MSE)SFELVAYEKLKGSIRESIITLIKSHNEKAKIIEDKLEYSVKEVSRERQPQVLVLLKTIELLDNSSKEPEDKARV LNALAYYIRDQIAATYKYTSPDNSDFYKSLTISLDLNKDNNPNREDLAD(MSE)YSALEKFLRSHVYKNSDPRKGYLDKQ PFAIKHYSVVDDILELSDRVHKLRHEIIIAARDLHLLQ ; _entity_poly.pdbx_seq_one_letter_code_can ;GMSFELVAYEKLKGSIRESIITLIKSHNEKAKIIEDKLEYSVKEVSRERQPQVLVLLKTIELLDNSSKEPEDKARVLNAL AYYIRDQIAATYKYTSPDNSDFYKSLTISLDLNKDNNPNREDLADMYSALEKFLRSHVYKNSDPRKGYLDKQPFAIKHYS VVDDILELSDRVHKLRHEIIIAARDLHLLQ ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier MCSG-APC108125 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 MSE n 1 3 SER n 1 4 PHE n 1 5 GLU n 1 6 LEU n 1 7 VAL n 1 8 ALA n 1 9 TYR n 1 10 GLU n 1 11 LYS n 1 12 LEU n 1 13 LYS n 1 14 GLY n 1 15 SER n 1 16 ILE n 1 17 ARG n 1 18 GLU n 1 19 SER n 1 20 ILE n 1 21 ILE n 1 22 THR n 1 23 LEU n 1 24 ILE n 1 25 LYS n 1 26 SER n 1 27 HIS n 1 28 ASN n 1 29 GLU n 1 30 LYS n 1 31 ALA n 1 32 LYS n 1 33 ILE n 1 34 ILE n 1 35 GLU n 1 36 ASP n 1 37 LYS n 1 38 LEU n 1 39 GLU n 1 40 TYR n 1 41 SER n 1 42 VAL n 1 43 LYS n 1 44 GLU n 1 45 VAL n 1 46 SER n 1 47 ARG n 1 48 GLU n 1 49 ARG n 1 50 GLN n 1 51 PRO n 1 52 GLN n 1 53 VAL n 1 54 LEU n 1 55 VAL n 1 56 LEU n 1 57 LEU n 1 58 LYS n 1 59 THR n 1 60 ILE n 1 61 GLU n 1 62 LEU n 1 63 LEU n 1 64 ASP n 1 65 ASN n 1 66 SER n 1 67 SER n 1 68 LYS n 1 69 GLU n 1 70 PRO n 1 71 GLU n 1 72 ASP n 1 73 LYS n 1 74 ALA n 1 75 ARG n 1 76 VAL n 1 77 LEU n 1 78 ASN n 1 79 ALA n 1 80 LEU n 1 81 ALA n 1 82 TYR n 1 83 TYR n 1 84 ILE n 1 85 ARG n 1 86 ASP n 1 87 GLN n 1 88 ILE n 1 89 ALA n 1 90 ALA n 1 91 THR n 1 92 TYR n 1 93 LYS n 1 94 TYR n 1 95 THR n 1 96 SER n 1 97 PRO n 1 98 ASP n 1 99 ASN n 1 100 SER n 1 101 ASP n 1 102 PHE n 1 103 TYR n 1 104 LYS n 1 105 SER n 1 106 LEU n 1 107 THR n 1 108 ILE n 1 109 SER n 1 110 LEU n 1 111 ASP n 1 112 LEU n 1 113 ASN n 1 114 LYS n 1 115 ASP n 1 116 ASN n 1 117 ASN n 1 118 PRO n 1 119 ASN n 1 120 ARG n 1 121 GLU n 1 122 ASP n 1 123 LEU n 1 124 ALA n 1 125 ASP n 1 126 MSE n 1 127 TYR n 1 128 SER n 1 129 ALA n 1 130 LEU n 1 131 GLU n 1 132 LYS n 1 133 PHE n 1 134 LEU n 1 135 ARG n 1 136 SER n 1 137 HIS n 1 138 VAL n 1 139 TYR n 1 140 LYS n 1 141 ASN n 1 142 SER n 1 143 ASP n 1 144 PRO n 1 145 ARG n 1 146 LYS n 1 147 GLY n 1 148 TYR n 1 149 LEU n 1 150 ASP n 1 151 LYS n 1 152 GLN n 1 153 PRO n 1 154 PHE n 1 155 ALA n 1 156 ILE n 1 157 LYS n 1 158 HIS n 1 159 TYR n 1 160 SER n 1 161 VAL n 1 162 VAL n 1 163 ASP n 1 164 ASP n 1 165 ILE n 1 166 LEU n 1 167 GLU n 1 168 LEU n 1 169 SER n 1 170 ASP n 1 171 ARG n 1 172 VAL n 1 173 HIS n 1 174 LYS n 1 175 LEU n 1 176 ARG n 1 177 HIS n 1 178 GLU n 1 179 ILE n 1 180 ILE n 1 181 ILE n 1 182 ALA n 1 183 ALA n 1 184 ARG n 1 185 ASP n 1 186 LEU n 1 187 HIS n 1 188 LEU n 1 189 LEU n 1 190 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene lpg1851 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'Philadelphia 1' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Legionella pneumophila subsp. pneumophila' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 272624 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21-CodonPlus(DE3)-RIL' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'p15Tv lic' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q5ZUE7_LEGPH _struct_ref.pdbx_db_accession Q5ZUE7 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MSFELVAYEKLKGSIRESIITLIKSHNEKAKIIEDKLEYSVKEVSRERQPQVLVLLKTIELLDNSSKEPEDKARVLNALA YYIRDQIAATYKYTSPDNSDFYKSLTISLDLNKDNNPNREDLADMYSALEKFLRSHVYKNSDPRKGYLDKQPFAIKHYSV VDDILELSDRVHKLRHEIIIAARDLHLLQ ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4HFV _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 190 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q5ZUE7 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 189 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 189 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 4HFV _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q5ZUE7 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'EXPRESSION TAG' _struct_ref_seq_dif.pdbx_auth_seq_num 0 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CIT non-polymer . 'CITRIC ACID' ? 'C6 H8 O7' 192.124 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SIN non-polymer . 'SUCCINIC ACID' ? 'C4 H6 O4' 118.088 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4HFV _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.51 _exptl_crystal.density_percent_sol 50.99 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.0 _exptl_crystal_grow.pdbx_details '0.2 M diammonium citrate, 20% PEG3350, 1/70 thermolysin, pH 5.0, VAPOR DIFFUSION, HANGING DROP, temperature 295K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.details mirrors _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2012-07-14 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'double crystal' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9794534 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9794534 # _reflns.entry_id 4HFV _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.0 _reflns.d_resolution_high 1.90 _reflns.number_obs 18684 _reflns.number_all 18726 _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs 0.104 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 13.4 _reflns.B_iso_Wilson_estimate 21.0 _reflns.pdbx_redundancy 4.5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.90 _reflns_shell.d_res_low 1.93 _reflns_shell.percent_possible_all 99.2 _reflns_shell.Rmerge_I_obs 0.542 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.06 _reflns_shell.pdbx_redundancy 4.0 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 899 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.ls_percent_reflns_R_free 5.11 _refine.overall_SU_B ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_R_Free_selection_details random _refine.overall_FOM_free_R_set ? _refine.pdbx_data_cutoff_low_absF ? _refine.entry_id 4HFV _refine.aniso_B[2][3] ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_ML 0.20 _refine.aniso_B[1][3] ? _refine.pdbx_stereochemistry_target_values ML _refine.aniso_B[3][3] ? _refine.solvent_model_param_ksol ? _refine.ls_number_restraints ? _refine.aniso_B[1][1] ? _refine.pdbx_overall_ESU_R ? _refine.ls_R_factor_obs 0.1854 _refine.occupancy_min ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_starting_model ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.pdbx_isotropic_thermal_model isotropic _refine.pdbx_method_to_determine_struct MAD _refine.occupancy_max ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.correlation_coeff_Fo_to_Fc ? _refine.ls_number_reflns_R_free 951 _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 99.74 _refine.ls_R_factor_R_work 0.1829 _refine.overall_SU_R_free ? _refine.ls_d_res_high 1.901 _refine.pdbx_overall_ESU_R_Free ? _refine.B_iso_min ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.B_iso_mean ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.ls_R_factor_all 0.1854 _refine.aniso_B[2][2] ? _refine.B_iso_max ? _refine.pdbx_ls_sigma_I ? _refine.ls_d_res_low 27.723 _refine.pdbx_overall_phase_error 23.19 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.aniso_B[1][2] ? _refine.ls_R_factor_R_free 0.2336 _refine.ls_R_factor_R_free_error ? _refine.ls_number_reflns_obs 18596 _refine.overall_FOM_work_R_set ? _refine.ls_number_parameters ? _refine.details ;HYDROGEN ATOMS HAVE BEEN ADDED AT RIDING POSITIONS, THE PROTEIN WAS SUBJECTED TO IN SITU PROTEOLYSIS, THEREFORE THE EXACT LENGTH OF THE CRYSTALLIZED POLYPEPTIDE COULD NOT BE DETERMINED ; _refine.ls_number_reflns_all 18596 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.solvent_model_param_bsol ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1553 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 21 _refine_hist.number_atoms_solvent 197 _refine_hist.number_atoms_total 1771 _refine_hist.d_res_high 1.901 _refine_hist.d_res_low 27.723 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.015 ? ? 1663 ? 'X-RAY DIFFRACTION' f_angle_d 1.360 ? ? 2250 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 17.480 ? ? 655 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.080 ? ? 248 ? 'X-RAY DIFFRACTION' f_plane_restr 0.007 ? ? 293 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 1.9010 2.0012 2429 0.2503 100.00 0.2839 . . 147 . . . . 'X-RAY DIFFRACTION' . 2.0012 2.1266 2452 0.2076 100.00 0.2642 . . 155 . . . . 'X-RAY DIFFRACTION' . 2.1266 2.2907 2491 0.2099 100.00 0.2757 . . 135 . . . . 'X-RAY DIFFRACTION' . 2.2907 2.5211 2484 0.1752 100.00 0.2274 . . 132 . . . . 'X-RAY DIFFRACTION' . 2.5211 2.8856 2537 0.1740 100.00 0.2421 . . 127 . . . . 'X-RAY DIFFRACTION' . 2.8856 3.6342 2542 0.1827 100.00 0.2221 . . 125 . . . . 'X-RAY DIFFRACTION' . 3.6342 27.7255 2710 0.1653 99.00 0.2076 . . 130 . . . . 'X-RAY DIFFRACTION' # _struct.entry_id 4HFV _struct.title 'Crystal structure of lpg1851 protein from Legionella pneumophila (putative T4SS effector)' _struct.pdbx_descriptor 'Uncharacterized protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.pdbx_keywords 'Structural Genomics, Unknown Function' _struct_keywords.text 'Structural Genomics, PSI-Biology, Midwest Center for Structural Genomics, MCSG, effector, Unknown Function' _struct_keywords.entry_id 4HFV # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 _struct_biol.details 'THE AUTHOR STATES THAT THE BIOLOGICAL UNIT OF THIS PROTEIN IS UNKNOWN.' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 8 ? ASN A 28 ? ALA A 7 ASN A 27 1 ? 21 HELX_P HELX_P2 2 ILE A 34 ? VAL A 45 ? ILE A 33 VAL A 44 5 ? 12 HELX_P HELX_P3 3 GLU A 48 ? ASN A 65 ? GLU A 47 ASN A 64 1 ? 18 HELX_P HELX_P4 4 GLU A 69 ? THR A 91 ? GLU A 68 THR A 90 1 ? 23 HELX_P HELX_P5 5 SER A 96 ? ASN A 99 ? SER A 95 ASN A 98 5 ? 4 HELX_P HELX_P6 6 SER A 100 ? LEU A 110 ? SER A 99 LEU A 109 1 ? 11 HELX_P HELX_P7 7 ASN A 119 ? HIS A 137 ? ASN A 118 HIS A 136 1 ? 19 HELX_P HELX_P8 8 VAL A 138 ? GLY A 147 ? VAL A 137 GLY A 146 5 ? 10 HELX_P HELX_P9 9 SER A 160 ? LEU A 189 ? SER A 159 LEU A 188 1 ? 30 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A MSE 2 C ? ? ? 1_555 A SER 3 N ? ? A MSE 1 A SER 2 1_555 ? ? ? ? ? ? ? 1.336 ? covale2 covale ? ? A ASP 125 C ? ? ? 1_555 A MSE 126 N ? ? A ASP 124 A MSE 125 1_555 ? ? ? ? ? ? ? 1.339 ? covale3 covale ? ? A MSE 126 C ? ? ? 1_555 A TYR 127 N ? ? A MSE 125 A TYR 126 1_555 ? ? ? ? ? ? ? 1.332 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 14 'BINDING SITE FOR RESIDUE CIT A 301' AC2 Software ? ? ? ? 8 'BINDING SITE FOR RESIDUE SIN A 302' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 14 HIS A 27 ? HIS A 26 . ? 1_555 ? 2 AC1 14 SER A 46 ? SER A 45 . ? 1_555 ? 3 AC1 14 ARG A 49 ? ARG A 48 . ? 1_555 ? 4 AC1 14 SER A 100 ? SER A 99 . ? 1_555 ? 5 AC1 14 ASP A 101 ? ASP A 100 . ? 1_555 ? 6 AC1 14 PHE A 102 ? PHE A 101 . ? 1_555 ? 7 AC1 14 HOH D . ? HOH A 473 . ? 1_555 ? 8 AC1 14 HOH D . ? HOH A 492 . ? 1_555 ? 9 AC1 14 HOH D . ? HOH A 493 . ? 1_555 ? 10 AC1 14 HOH D . ? HOH A 494 . ? 1_555 ? 11 AC1 14 HOH D . ? HOH A 565 . ? 1_555 ? 12 AC1 14 HOH D . ? HOH A 566 . ? 1_555 ? 13 AC1 14 HOH D . ? HOH A 568 . ? 1_555 ? 14 AC1 14 HOH D . ? HOH A 591 . ? 1_555 ? 15 AC2 8 SER A 169 ? SER A 168 . ? 5_555 ? 16 AC2 8 SER A 169 ? SER A 168 . ? 1_555 ? 17 AC2 8 HIS A 173 ? HIS A 172 . ? 1_555 ? 18 AC2 8 HIS A 173 ? HIS A 172 . ? 5_555 ? 19 AC2 8 ARG A 176 ? ARG A 175 . ? 5_555 ? 20 AC2 8 ARG A 176 ? ARG A 175 . ? 1_555 ? 21 AC2 8 HOH D . ? HOH A 465 . ? 1_555 ? 22 AC2 8 HOH D . ? HOH A 465 . ? 5_555 ? # _database_PDB_matrix.entry_id 4HFV _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4HFV _atom_sites.fract_transf_matrix[1][1] 0.023074 _atom_sites.fract_transf_matrix[1][2] 0.013322 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.026643 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004863 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 MSE 2 1 1 MSE MSE A . n A 1 3 SER 3 2 2 SER SER A . n A 1 4 PHE 4 3 3 PHE PHE A . n A 1 5 GLU 5 4 4 GLU GLU A . n A 1 6 LEU 6 5 5 LEU LEU A . n A 1 7 VAL 7 6 6 VAL VAL A . n A 1 8 ALA 8 7 7 ALA ALA A . n A 1 9 TYR 9 8 8 TYR TYR A . n A 1 10 GLU 10 9 9 GLU GLU A . n A 1 11 LYS 11 10 10 LYS LYS A . n A 1 12 LEU 12 11 11 LEU LEU A . n A 1 13 LYS 13 12 12 LYS LYS A . n A 1 14 GLY 14 13 13 GLY GLY A . n A 1 15 SER 15 14 14 SER SER A . n A 1 16 ILE 16 15 15 ILE ILE A . n A 1 17 ARG 17 16 16 ARG ARG A . n A 1 18 GLU 18 17 17 GLU GLU A . n A 1 19 SER 19 18 18 SER SER A . n A 1 20 ILE 20 19 19 ILE ILE A . n A 1 21 ILE 21 20 20 ILE ILE A . n A 1 22 THR 22 21 21 THR THR A . n A 1 23 LEU 23 22 22 LEU LEU A . n A 1 24 ILE 24 23 23 ILE ILE A . n A 1 25 LYS 25 24 24 LYS LYS A . n A 1 26 SER 26 25 25 SER SER A . n A 1 27 HIS 27 26 26 HIS HIS A . n A 1 28 ASN 28 27 27 ASN ASN A . n A 1 29 GLU 29 28 28 GLU GLU A . n A 1 30 LYS 30 29 29 LYS LYS A . n A 1 31 ALA 31 30 30 ALA ALA A . n A 1 32 LYS 32 31 31 LYS LYS A . n A 1 33 ILE 33 32 32 ILE ILE A . n A 1 34 ILE 34 33 33 ILE ILE A . n A 1 35 GLU 35 34 34 GLU GLU A . n A 1 36 ASP 36 35 35 ASP ASP A . n A 1 37 LYS 37 36 36 LYS LYS A . n A 1 38 LEU 38 37 37 LEU LEU A . n A 1 39 GLU 39 38 38 GLU GLU A . n A 1 40 TYR 40 39 39 TYR TYR A . n A 1 41 SER 41 40 40 SER SER A . n A 1 42 VAL 42 41 41 VAL VAL A . n A 1 43 LYS 43 42 42 LYS LYS A . n A 1 44 GLU 44 43 43 GLU GLU A . n A 1 45 VAL 45 44 44 VAL VAL A . n A 1 46 SER 46 45 45 SER SER A . n A 1 47 ARG 47 46 46 ARG ARG A . n A 1 48 GLU 48 47 47 GLU GLU A . n A 1 49 ARG 49 48 48 ARG ARG A . n A 1 50 GLN 50 49 49 GLN GLN A . n A 1 51 PRO 51 50 50 PRO PRO A . n A 1 52 GLN 52 51 51 GLN GLN A . n A 1 53 VAL 53 52 52 VAL VAL A . n A 1 54 LEU 54 53 53 LEU LEU A . n A 1 55 VAL 55 54 54 VAL VAL A . n A 1 56 LEU 56 55 55 LEU LEU A . n A 1 57 LEU 57 56 56 LEU LEU A . n A 1 58 LYS 58 57 57 LYS LYS A . n A 1 59 THR 59 58 58 THR THR A . n A 1 60 ILE 60 59 59 ILE ILE A . n A 1 61 GLU 61 60 60 GLU GLU A . n A 1 62 LEU 62 61 61 LEU LEU A . n A 1 63 LEU 63 62 62 LEU LEU A . n A 1 64 ASP 64 63 63 ASP ASP A . n A 1 65 ASN 65 64 64 ASN ASN A . n A 1 66 SER 66 65 65 SER SER A . n A 1 67 SER 67 66 66 SER SER A . n A 1 68 LYS 68 67 67 LYS LYS A . n A 1 69 GLU 69 68 68 GLU GLU A . n A 1 70 PRO 70 69 69 PRO PRO A . n A 1 71 GLU 71 70 70 GLU GLU A . n A 1 72 ASP 72 71 71 ASP ASP A . n A 1 73 LYS 73 72 72 LYS LYS A . n A 1 74 ALA 74 73 73 ALA ALA A . n A 1 75 ARG 75 74 74 ARG ARG A . n A 1 76 VAL 76 75 75 VAL VAL A . n A 1 77 LEU 77 76 76 LEU LEU A . n A 1 78 ASN 78 77 77 ASN ASN A . n A 1 79 ALA 79 78 78 ALA ALA A . n A 1 80 LEU 80 79 79 LEU LEU A . n A 1 81 ALA 81 80 80 ALA ALA A . n A 1 82 TYR 82 81 81 TYR TYR A . n A 1 83 TYR 83 82 82 TYR TYR A . n A 1 84 ILE 84 83 83 ILE ILE A . n A 1 85 ARG 85 84 84 ARG ARG A . n A 1 86 ASP 86 85 85 ASP ASP A . n A 1 87 GLN 87 86 86 GLN GLN A . n A 1 88 ILE 88 87 87 ILE ILE A . n A 1 89 ALA 89 88 88 ALA ALA A . n A 1 90 ALA 90 89 89 ALA ALA A . n A 1 91 THR 91 90 90 THR THR A . n A 1 92 TYR 92 91 91 TYR TYR A . n A 1 93 LYS 93 92 92 LYS LYS A . n A 1 94 TYR 94 93 93 TYR TYR A . n A 1 95 THR 95 94 94 THR THR A . n A 1 96 SER 96 95 95 SER SER A . n A 1 97 PRO 97 96 96 PRO PRO A . n A 1 98 ASP 98 97 97 ASP ASP A . n A 1 99 ASN 99 98 98 ASN ASN A . n A 1 100 SER 100 99 99 SER SER A . n A 1 101 ASP 101 100 100 ASP ASP A . n A 1 102 PHE 102 101 101 PHE PHE A . n A 1 103 TYR 103 102 102 TYR TYR A . n A 1 104 LYS 104 103 103 LYS LYS A . n A 1 105 SER 105 104 104 SER SER A . n A 1 106 LEU 106 105 105 LEU LEU A . n A 1 107 THR 107 106 106 THR THR A . n A 1 108 ILE 108 107 107 ILE ILE A . n A 1 109 SER 109 108 108 SER SER A . n A 1 110 LEU 110 109 109 LEU LEU A . n A 1 111 ASP 111 110 110 ASP ASP A . n A 1 112 LEU 112 111 111 LEU LEU A . n A 1 113 ASN 113 112 112 ASN ASN A . n A 1 114 LYS 114 113 113 LYS LYS A . n A 1 115 ASP 115 114 114 ASP ASP A . n A 1 116 ASN 116 115 115 ASN ASN A . n A 1 117 ASN 117 116 116 ASN ASN A . n A 1 118 PRO 118 117 117 PRO PRO A . n A 1 119 ASN 119 118 118 ASN ASN A . n A 1 120 ARG 120 119 119 ARG ARG A . n A 1 121 GLU 121 120 120 GLU GLU A . n A 1 122 ASP 122 121 121 ASP ASP A . n A 1 123 LEU 123 122 122 LEU LEU A . n A 1 124 ALA 124 123 123 ALA ALA A . n A 1 125 ASP 125 124 124 ASP ASP A . n A 1 126 MSE 126 125 125 MSE MSE A . n A 1 127 TYR 127 126 126 TYR TYR A . n A 1 128 SER 128 127 127 SER SER A . n A 1 129 ALA 129 128 128 ALA ALA A . n A 1 130 LEU 130 129 129 LEU LEU A . n A 1 131 GLU 131 130 130 GLU GLU A . n A 1 132 LYS 132 131 131 LYS LYS A . n A 1 133 PHE 133 132 132 PHE PHE A . n A 1 134 LEU 134 133 133 LEU LEU A . n A 1 135 ARG 135 134 134 ARG ARG A . n A 1 136 SER 136 135 135 SER SER A . n A 1 137 HIS 137 136 136 HIS HIS A . n A 1 138 VAL 138 137 137 VAL VAL A . n A 1 139 TYR 139 138 138 TYR TYR A . n A 1 140 LYS 140 139 139 LYS LYS A . n A 1 141 ASN 141 140 140 ASN ASN A . n A 1 142 SER 142 141 141 SER SER A . n A 1 143 ASP 143 142 142 ASP ASP A . n A 1 144 PRO 144 143 143 PRO PRO A . n A 1 145 ARG 145 144 144 ARG ARG A . n A 1 146 LYS 146 145 145 LYS LYS A . n A 1 147 GLY 147 146 146 GLY GLY A . n A 1 148 TYR 148 147 147 TYR TYR A . n A 1 149 LEU 149 148 148 LEU LEU A . n A 1 150 ASP 150 149 149 ASP ASP A . n A 1 151 LYS 151 150 150 LYS LYS A . n A 1 152 GLN 152 151 151 GLN GLN A . n A 1 153 PRO 153 152 152 PRO PRO A . n A 1 154 PHE 154 153 153 PHE PHE A . n A 1 155 ALA 155 154 154 ALA ALA A . n A 1 156 ILE 156 155 155 ILE ILE A . n A 1 157 LYS 157 156 156 LYS LYS A . n A 1 158 HIS 158 157 157 HIS HIS A . n A 1 159 TYR 159 158 158 TYR TYR A . n A 1 160 SER 160 159 159 SER SER A . n A 1 161 VAL 161 160 160 VAL VAL A . n A 1 162 VAL 162 161 161 VAL VAL A . n A 1 163 ASP 163 162 162 ASP ASP A . n A 1 164 ASP 164 163 163 ASP ASP A . n A 1 165 ILE 165 164 164 ILE ILE A . n A 1 166 LEU 166 165 165 LEU LEU A . n A 1 167 GLU 167 166 166 GLU GLU A . n A 1 168 LEU 168 167 167 LEU LEU A . n A 1 169 SER 169 168 168 SER SER A . n A 1 170 ASP 170 169 169 ASP ASP A . n A 1 171 ARG 171 170 170 ARG ARG A . n A 1 172 VAL 172 171 171 VAL VAL A . n A 1 173 HIS 173 172 172 HIS HIS A . n A 1 174 LYS 174 173 173 LYS LYS A . n A 1 175 LEU 175 174 174 LEU LEU A . n A 1 176 ARG 176 175 175 ARG ARG A . n A 1 177 HIS 177 176 176 HIS HIS A . n A 1 178 GLU 178 177 177 GLU GLU A . n A 1 179 ILE 179 178 178 ILE ILE A . n A 1 180 ILE 180 179 179 ILE ILE A . n A 1 181 ILE 181 180 180 ILE ILE A . n A 1 182 ALA 182 181 181 ALA ALA A . n A 1 183 ALA 183 182 182 ALA ALA A . n A 1 184 ARG 184 183 183 ARG ARG A . n A 1 185 ASP 185 184 184 ASP ASP A . n A 1 186 LEU 186 185 185 LEU LEU A . n A 1 187 HIS 187 186 186 HIS HIS A . n A 1 188 LEU 188 187 187 LEU LEU A . n A 1 189 LEU 189 188 188 LEU LEU A . n A 1 190 GLN 190 189 189 GLN GLN A . n # _pdbx_SG_project.project_name PSI:Biology _pdbx_SG_project.full_name_of_center 'Midwest Center for Structural Genomics' _pdbx_SG_project.initial_of_center MCSG _pdbx_SG_project.id 1 # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 2 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 126 A MSE 125 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3450 ? 1 MORE -4 ? 1 'SSA (A^2)' 20260 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 5_555 x-y,-y,-z+1/3 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 68.5403333333 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-11-07 2 'Structure model' 1 1 2017-01-04 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined -4.3185 5.5612 12.7630 0.3267 0.2598 0.2979 0.0237 -0.0362 -0.0165 4.8141 2.8824 7.7140 -2.2371 1.5871 2.0118 -0.6403 -0.0054 1.1762 -0.3938 0.4457 -0.0273 -1.2526 0.6530 0.1322 'X-RAY DIFFRACTION' 2 ? refined -1.6961 -13.0332 4.1502 0.1327 0.1022 0.1357 -0.0171 0.0036 -0.0420 1.0824 1.0428 0.9291 -0.8111 -0.3363 0.4717 -0.0795 0.1493 -0.6202 -0.3779 -0.1150 0.5164 0.1032 -0.1982 0.0152 'X-RAY DIFFRACTION' 3 ? refined 0.2968 -24.2239 -2.3877 0.2894 0.1488 0.3136 -0.0270 0.0844 -0.1431 3.0823 3.8891 5.6533 -2.7465 0.0772 0.7937 -0.1877 0.0253 -1.1345 0.3494 -0.2147 0.6310 0.9396 -0.7289 0.5567 'X-RAY DIFFRACTION' 4 ? refined -1.0564 -23.0624 6.9704 0.5000 0.2154 0.2884 -0.0331 0.0850 -0.0510 2.7655 1.8630 6.7832 -0.8678 2.8345 -0.4404 0.1876 -0.1791 -0.7925 0.0856 -0.0341 0.4095 0.6965 -0.9635 0.4940 'X-RAY DIFFRACTION' 5 ? refined -3.7894 -14.5149 15.7876 -0.0648 0.1980 0.1188 -0.0484 0.0366 0.0188 1.0823 1.9964 2.6940 0.4882 -0.3833 -0.2710 -0.1100 0.1766 -0.1608 0.0098 -0.0274 0.2294 1.1714 -0.4658 -0.0296 'X-RAY DIFFRACTION' 6 ? refined 5.0029 -4.3534 11.7816 0.0939 0.1023 0.0792 -0.0006 -0.0027 0.0048 0.9691 1.6587 1.5356 0.8705 0.8155 0.2205 -0.0167 0.1310 0.0816 -0.0604 0.0035 -0.0072 -0.1405 -0.1252 -0.0036 'X-RAY DIFFRACTION' 7 ? refined 0.7467 6.9040 10.0360 0.4508 0.1468 0.1142 -0.0042 0.0255 -0.0239 7.9361 0.5212 1.8691 -1.6200 1.8343 0.1025 0.1861 0.9260 0.8798 0.0861 -0.5422 -0.0255 -1.6407 0.2420 -0.4066 'X-RAY DIFFRACTION' 8 ? refined -2.4238 -2.0979 24.3625 0.1636 0.1810 0.1069 0.0012 0.0003 -0.0353 0.5944 0.7269 3.5014 -0.2193 -0.4191 -0.3028 0.1670 -0.0452 0.1807 0.0624 -0.3081 0.5326 -0.6840 -0.0529 -0.1766 'X-RAY DIFFRACTION' 9 ? refined -2.0031 -18.2809 29.5647 0.2540 0.2241 0.1440 -0.0392 0.0421 -0.0288 1.4171 0.8752 0.5545 -0.5864 0.4209 -0.2341 -0.0349 -0.4491 0.0583 0.3402 0.0637 0.0362 0.5929 -0.0068 -0.0122 'X-RAY DIFFRACTION' 10 ? refined 5.2750 5.9935 29.3459 0.1549 0.1776 0.1401 -0.0115 0.0026 -0.0067 2.4050 4.6336 2.1373 -0.6917 -1.1185 0.1019 0.1050 0.1113 0.3898 0.3546 0.1067 -0.8081 -0.3993 0.0259 0.0050 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 1 : 7 ) ; 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 8 : 26 ) ; 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 27 : 33 ) ; 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 34 : 45 ) ; 'X-RAY DIFFRACTION' 5 5 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 46 : 68 ) ; 'X-RAY DIFFRACTION' 6 6 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 69 : 108 ) ; 'X-RAY DIFFRACTION' 7 7 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 109 : 118 ) ; 'X-RAY DIFFRACTION' 8 8 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 119 : 136 ) ; 'X-RAY DIFFRACTION' 9 9 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 137 : 159 ) ; 'X-RAY DIFFRACTION' 10 10 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 160 : 189 ) ; # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SBC-Collect 'data collection' . ? 1 autoSHARP phasing . ? 2 PHENIX refinement '(phenix.refine: 1.8_1069)' ? 3 HKL-3000 'data reduction' . ? 4 HKL-3000 'data scaling' . ? 5 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id TYR _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 93 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -154.30 _pdbx_validate_torsion.psi 1.09 # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id GLY _pdbx_unobs_or_zero_occ_residues.auth_seq_id 0 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id GLY _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CITRIC ACID' CIT 3 'SUCCINIC ACID' SIN 4 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CIT 1 301 1 CIT CIT A . C 3 SIN 1 302 1 SIN SIN A . D 4 HOH 1 401 1 HOH HOH A . D 4 HOH 2 402 2 HOH HOH A . D 4 HOH 3 403 3 HOH HOH A . D 4 HOH 4 404 4 HOH HOH A . D 4 HOH 5 405 5 HOH HOH A . D 4 HOH 6 406 6 HOH HOH A . D 4 HOH 7 407 7 HOH HOH A . D 4 HOH 8 408 8 HOH HOH A . D 4 HOH 9 409 9 HOH HOH A . D 4 HOH 10 410 10 HOH HOH A . D 4 HOH 11 411 11 HOH HOH A . D 4 HOH 12 412 12 HOH HOH A . D 4 HOH 13 413 13 HOH HOH A . D 4 HOH 14 414 14 HOH HOH A . D 4 HOH 15 415 15 HOH HOH A . D 4 HOH 16 416 16 HOH HOH A . D 4 HOH 17 417 17 HOH HOH A . D 4 HOH 18 418 18 HOH HOH A . D 4 HOH 19 419 19 HOH HOH A . D 4 HOH 20 420 20 HOH HOH A . D 4 HOH 21 421 21 HOH HOH A . D 4 HOH 22 422 22 HOH HOH A . D 4 HOH 23 423 23 HOH HOH A . D 4 HOH 24 424 24 HOH HOH A . D 4 HOH 25 425 25 HOH HOH A . D 4 HOH 26 426 26 HOH HOH A . D 4 HOH 27 427 27 HOH HOH A . D 4 HOH 28 428 28 HOH HOH A . D 4 HOH 29 429 29 HOH HOH A . D 4 HOH 30 430 30 HOH HOH A . D 4 HOH 31 431 31 HOH HOH A . D 4 HOH 32 432 32 HOH HOH A . D 4 HOH 33 433 33 HOH HOH A . D 4 HOH 34 434 34 HOH HOH A . D 4 HOH 35 435 35 HOH HOH A . D 4 HOH 36 436 36 HOH HOH A . D 4 HOH 37 437 37 HOH HOH A . D 4 HOH 38 438 38 HOH HOH A . D 4 HOH 39 439 39 HOH HOH A . D 4 HOH 40 440 40 HOH HOH A . D 4 HOH 41 441 41 HOH HOH A . D 4 HOH 42 442 42 HOH HOH A . D 4 HOH 43 443 43 HOH HOH A . D 4 HOH 44 444 44 HOH HOH A . D 4 HOH 45 445 45 HOH HOH A . D 4 HOH 46 446 46 HOH HOH A . D 4 HOH 47 447 47 HOH HOH A . D 4 HOH 48 448 48 HOH HOH A . D 4 HOH 49 449 49 HOH HOH A . D 4 HOH 50 450 50 HOH HOH A . D 4 HOH 51 451 51 HOH HOH A . D 4 HOH 52 452 52 HOH HOH A . D 4 HOH 53 453 53 HOH HOH A . D 4 HOH 54 454 54 HOH HOH A . D 4 HOH 55 455 55 HOH HOH A . D 4 HOH 56 456 56 HOH HOH A . D 4 HOH 57 457 57 HOH HOH A . D 4 HOH 58 458 58 HOH HOH A . D 4 HOH 59 459 59 HOH HOH A . D 4 HOH 60 460 60 HOH HOH A . D 4 HOH 61 461 61 HOH HOH A . D 4 HOH 62 462 62 HOH HOH A . D 4 HOH 63 463 63 HOH HOH A . D 4 HOH 64 464 64 HOH HOH A . D 4 HOH 65 465 65 HOH HOH A . D 4 HOH 66 466 66 HOH HOH A . D 4 HOH 67 467 67 HOH HOH A . D 4 HOH 68 468 68 HOH HOH A . D 4 HOH 69 469 69 HOH HOH A . D 4 HOH 70 470 70 HOH HOH A . D 4 HOH 71 471 71 HOH HOH A . D 4 HOH 72 472 72 HOH HOH A . D 4 HOH 73 473 73 HOH HOH A . D 4 HOH 74 474 74 HOH HOH A . D 4 HOH 75 475 75 HOH HOH A . D 4 HOH 76 476 76 HOH HOH A . D 4 HOH 77 477 77 HOH HOH A . D 4 HOH 78 478 78 HOH HOH A . D 4 HOH 79 479 79 HOH HOH A . D 4 HOH 80 480 80 HOH HOH A . D 4 HOH 81 481 81 HOH HOH A . D 4 HOH 82 482 82 HOH HOH A . D 4 HOH 83 483 83 HOH HOH A . D 4 HOH 84 484 84 HOH HOH A . D 4 HOH 85 485 85 HOH HOH A . D 4 HOH 86 486 86 HOH HOH A . D 4 HOH 87 487 87 HOH HOH A . D 4 HOH 88 488 88 HOH HOH A . D 4 HOH 89 489 89 HOH HOH A . D 4 HOH 90 490 90 HOH HOH A . D 4 HOH 91 491 91 HOH HOH A . D 4 HOH 92 492 92 HOH HOH A . D 4 HOH 93 493 93 HOH HOH A . D 4 HOH 94 494 94 HOH HOH A . D 4 HOH 95 495 95 HOH HOH A . D 4 HOH 96 496 96 HOH HOH A . D 4 HOH 97 497 97 HOH HOH A . D 4 HOH 98 498 98 HOH HOH A . D 4 HOH 99 499 99 HOH HOH A . D 4 HOH 100 500 100 HOH HOH A . D 4 HOH 101 501 101 HOH HOH A . D 4 HOH 102 502 102 HOH HOH A . D 4 HOH 103 503 103 HOH HOH A . D 4 HOH 104 504 104 HOH HOH A . D 4 HOH 105 505 105 HOH HOH A . D 4 HOH 106 506 106 HOH HOH A . D 4 HOH 107 507 107 HOH HOH A . D 4 HOH 108 508 108 HOH HOH A . D 4 HOH 109 509 109 HOH HOH A . D 4 HOH 110 510 110 HOH HOH A . D 4 HOH 111 511 111 HOH HOH A . D 4 HOH 112 512 112 HOH HOH A . D 4 HOH 113 513 113 HOH HOH A . D 4 HOH 114 514 114 HOH HOH A . D 4 HOH 115 515 115 HOH HOH A . D 4 HOH 116 516 116 HOH HOH A . D 4 HOH 117 517 117 HOH HOH A . D 4 HOH 118 518 118 HOH HOH A . D 4 HOH 119 519 119 HOH HOH A . D 4 HOH 120 520 120 HOH HOH A . D 4 HOH 121 521 121 HOH HOH A . D 4 HOH 122 522 122 HOH HOH A . D 4 HOH 123 523 123 HOH HOH A . D 4 HOH 124 524 124 HOH HOH A . D 4 HOH 125 525 125 HOH HOH A . D 4 HOH 126 526 126 HOH HOH A . D 4 HOH 127 527 127 HOH HOH A . D 4 HOH 128 528 128 HOH HOH A . D 4 HOH 129 529 129 HOH HOH A . D 4 HOH 130 530 130 HOH HOH A . D 4 HOH 131 531 131 HOH HOH A . D 4 HOH 132 532 132 HOH HOH A . D 4 HOH 133 533 133 HOH HOH A . D 4 HOH 134 534 134 HOH HOH A . D 4 HOH 135 535 135 HOH HOH A . D 4 HOH 136 536 136 HOH HOH A . D 4 HOH 137 537 137 HOH HOH A . D 4 HOH 138 538 138 HOH HOH A . D 4 HOH 139 539 139 HOH HOH A . D 4 HOH 140 540 140 HOH HOH A . D 4 HOH 141 541 141 HOH HOH A . D 4 HOH 142 542 142 HOH HOH A . D 4 HOH 143 543 143 HOH HOH A . D 4 HOH 144 544 144 HOH HOH A . D 4 HOH 145 545 145 HOH HOH A . D 4 HOH 146 546 146 HOH HOH A . D 4 HOH 147 547 147 HOH HOH A . D 4 HOH 148 548 148 HOH HOH A . D 4 HOH 149 549 149 HOH HOH A . D 4 HOH 150 550 150 HOH HOH A . D 4 HOH 151 551 151 HOH HOH A . D 4 HOH 152 552 152 HOH HOH A . D 4 HOH 153 553 153 HOH HOH A . D 4 HOH 154 554 154 HOH HOH A . D 4 HOH 155 555 155 HOH HOH A . D 4 HOH 156 556 156 HOH HOH A . D 4 HOH 157 557 157 HOH HOH A . D 4 HOH 158 558 158 HOH HOH A . D 4 HOH 159 559 159 HOH HOH A . D 4 HOH 160 560 160 HOH HOH A . D 4 HOH 161 561 161 HOH HOH A . D 4 HOH 162 562 162 HOH HOH A . D 4 HOH 163 563 163 HOH HOH A . D 4 HOH 164 564 164 HOH HOH A . D 4 HOH 165 565 165 HOH HOH A . D 4 HOH 166 566 166 HOH HOH A . D 4 HOH 167 567 167 HOH HOH A . D 4 HOH 168 568 168 HOH HOH A . D 4 HOH 169 569 169 HOH HOH A . D 4 HOH 170 570 170 HOH HOH A . D 4 HOH 171 571 171 HOH HOH A . D 4 HOH 172 572 172 HOH HOH A . D 4 HOH 173 573 173 HOH HOH A . D 4 HOH 174 574 174 HOH HOH A . D 4 HOH 175 575 175 HOH HOH A . D 4 HOH 176 576 176 HOH HOH A . D 4 HOH 177 577 177 HOH HOH A . D 4 HOH 178 578 178 HOH HOH A . D 4 HOH 179 579 179 HOH HOH A . D 4 HOH 180 580 180 HOH HOH A . D 4 HOH 181 581 181 HOH HOH A . D 4 HOH 182 582 182 HOH HOH A . D 4 HOH 183 583 183 HOH HOH A . D 4 HOH 184 584 184 HOH HOH A . D 4 HOH 185 585 185 HOH HOH A . D 4 HOH 186 586 186 HOH HOH A . D 4 HOH 187 587 187 HOH HOH A . D 4 HOH 188 588 188 HOH HOH A . D 4 HOH 189 589 189 HOH HOH A . D 4 HOH 190 590 190 HOH HOH A . D 4 HOH 191 591 191 HOH HOH A . D 4 HOH 192 592 192 HOH HOH A . D 4 HOH 193 593 193 HOH HOH A . D 4 HOH 194 594 194 HOH HOH A . D 4 HOH 195 595 195 HOH HOH A . D 4 HOH 196 596 196 HOH HOH A . D 4 HOH 197 597 197 HOH HOH A . #