data_4HTE # _entry.id 4HTE # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.292 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4HTE RCSB RCSB075896 WWPDB D_1000075896 # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 4HT4 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 4HTE _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2012-11-01 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _audit_author.name 'Betts, L.' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Molecular basis of antibiotic multiresistance transfer in Staphylococcus aureus.' _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 110 _citation.page_first 2804 _citation.page_last 2809 _citation.year 2013 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23359708 _citation.pdbx_database_id_DOI 10.1073/pnas.1219701110 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Edwards, J.S.' 1 primary 'Betts, L.' 2 primary 'Frazier, M.L.' 3 primary 'Pollet, R.M.' 4 primary 'Kwong, S.M.' 5 primary 'Walton, W.G.' 6 primary 'Ballentine, W.K.' 7 primary 'Huang, J.J.' 8 primary 'Habibi, S.' 9 primary 'Del Campo, M.' 10 primary 'Meier, J.L.' 11 primary 'Dervan, P.B.' 12 primary 'Firth, N.' 13 primary 'Redinbo, M.R.' 14 # _cell.entry_id 4HTE _cell.length_a 75.284 _cell.length_b 75.284 _cell.length_c 179.849 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4HTE _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Nicking enzyme' 42173.566 1 ? 'E404A, K4045, E406A' 'unp residues 254-593' ? 2 non-polymer syn 'CALCIUM ION' 40.078 1 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'OriT nickase, OriT nickase Nes, OriT relaxase Nes' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;L(MSE)FNEVDD(MSE)KSHKLNAFSY(MSE)NKSDSTTLKN(MSE)AKDLKIYVTPIN(MSE)YKENERLYDLKQKTSL ITDDEDRLNKIEDIEDRQKKLESINEVFEKQAGIFFDKNYPDQSLNYSDDEKIFITRTILNDRDVLPANNELEDIVKEKR IKEAQISLNTVLGNRDISLESIAAASNFFADKLSNILEKNNLSFDDVLENKHEG(MSE)EDSLKIDYYTNKLEVFRNAEN ILEDYYDVQIKELFTDDEDYKAFNEVTDIKEKQQLIDFKTYHGTENTIE(MSE)LETGNFIPKYSDEDRKYITEQVKLLQ EKEFKPNKNQHDKFVFGAIQKKLLSEYDFDYSDNNDLKHLYQESNEVGDEISKDNIEEFYE ; _entity_poly.pdbx_seq_one_letter_code_can ;LMFNEVDDMKSHKLNAFSYMNKSDSTTLKNMAKDLKIYVTPINMYKENERLYDLKQKTSLITDDEDRLNKIEDIEDRQKK LESINEVFEKQAGIFFDKNYPDQSLNYSDDEKIFITRTILNDRDVLPANNELEDIVKEKRIKEAQISLNTVLGNRDISLE SIAAASNFFADKLSNILEKNNLSFDDVLENKHEGMEDSLKIDYYTNKLEVFRNAENILEDYYDVQIKELFTDDEDYKAFN EVTDIKEKQQLIDFKTYHGTENTIEMLETGNFIPKYSDEDRKYITEQVKLLQEKEFKPNKNQHDKFVFGAIQKKLLSEYD FDYSDNNDLKHLYQESNEVGDEISKDNIEEFYE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LEU n 1 2 MSE n 1 3 PHE n 1 4 ASN n 1 5 GLU n 1 6 VAL n 1 7 ASP n 1 8 ASP n 1 9 MSE n 1 10 LYS n 1 11 SER n 1 12 HIS n 1 13 LYS n 1 14 LEU n 1 15 ASN n 1 16 ALA n 1 17 PHE n 1 18 SER n 1 19 TYR n 1 20 MSE n 1 21 ASN n 1 22 LYS n 1 23 SER n 1 24 ASP n 1 25 SER n 1 26 THR n 1 27 THR n 1 28 LEU n 1 29 LYS n 1 30 ASN n 1 31 MSE n 1 32 ALA n 1 33 LYS n 1 34 ASP n 1 35 LEU n 1 36 LYS n 1 37 ILE n 1 38 TYR n 1 39 VAL n 1 40 THR n 1 41 PRO n 1 42 ILE n 1 43 ASN n 1 44 MSE n 1 45 TYR n 1 46 LYS n 1 47 GLU n 1 48 ASN n 1 49 GLU n 1 50 ARG n 1 51 LEU n 1 52 TYR n 1 53 ASP n 1 54 LEU n 1 55 LYS n 1 56 GLN n 1 57 LYS n 1 58 THR n 1 59 SER n 1 60 LEU n 1 61 ILE n 1 62 THR n 1 63 ASP n 1 64 ASP n 1 65 GLU n 1 66 ASP n 1 67 ARG n 1 68 LEU n 1 69 ASN n 1 70 LYS n 1 71 ILE n 1 72 GLU n 1 73 ASP n 1 74 ILE n 1 75 GLU n 1 76 ASP n 1 77 ARG n 1 78 GLN n 1 79 LYS n 1 80 LYS n 1 81 LEU n 1 82 GLU n 1 83 SER n 1 84 ILE n 1 85 ASN n 1 86 GLU n 1 87 VAL n 1 88 PHE n 1 89 GLU n 1 90 LYS n 1 91 GLN n 1 92 ALA n 1 93 GLY n 1 94 ILE n 1 95 PHE n 1 96 PHE n 1 97 ASP n 1 98 LYS n 1 99 ASN n 1 100 TYR n 1 101 PRO n 1 102 ASP n 1 103 GLN n 1 104 SER n 1 105 LEU n 1 106 ASN n 1 107 TYR n 1 108 SER n 1 109 ASP n 1 110 ASP n 1 111 GLU n 1 112 LYS n 1 113 ILE n 1 114 PHE n 1 115 ILE n 1 116 THR n 1 117 ARG n 1 118 THR n 1 119 ILE n 1 120 LEU n 1 121 ASN n 1 122 ASP n 1 123 ARG n 1 124 ASP n 1 125 VAL n 1 126 LEU n 1 127 PRO n 1 128 ALA n 1 129 ASN n 1 130 ASN n 1 131 GLU n 1 132 LEU n 1 133 GLU n 1 134 ASP n 1 135 ILE n 1 136 VAL n 1 137 LYS n 1 138 GLU n 1 139 LYS n 1 140 ARG n 1 141 ILE n 1 142 LYS n 1 143 GLU n 1 144 ALA n 1 145 GLN n 1 146 ILE n 1 147 SER n 1 148 LEU n 1 149 ASN n 1 150 THR n 1 151 VAL n 1 152 LEU n 1 153 GLY n 1 154 ASN n 1 155 ARG n 1 156 ASP n 1 157 ILE n 1 158 SER n 1 159 LEU n 1 160 GLU n 1 161 SER n 1 162 ILE n 1 163 ALA n 1 164 ALA n 1 165 ALA n 1 166 SER n 1 167 ASN n 1 168 PHE n 1 169 PHE n 1 170 ALA n 1 171 ASP n 1 172 LYS n 1 173 LEU n 1 174 SER n 1 175 ASN n 1 176 ILE n 1 177 LEU n 1 178 GLU n 1 179 LYS n 1 180 ASN n 1 181 ASN n 1 182 LEU n 1 183 SER n 1 184 PHE n 1 185 ASP n 1 186 ASP n 1 187 VAL n 1 188 LEU n 1 189 GLU n 1 190 ASN n 1 191 LYS n 1 192 HIS n 1 193 GLU n 1 194 GLY n 1 195 MSE n 1 196 GLU n 1 197 ASP n 1 198 SER n 1 199 LEU n 1 200 LYS n 1 201 ILE n 1 202 ASP n 1 203 TYR n 1 204 TYR n 1 205 THR n 1 206 ASN n 1 207 LYS n 1 208 LEU n 1 209 GLU n 1 210 VAL n 1 211 PHE n 1 212 ARG n 1 213 ASN n 1 214 ALA n 1 215 GLU n 1 216 ASN n 1 217 ILE n 1 218 LEU n 1 219 GLU n 1 220 ASP n 1 221 TYR n 1 222 TYR n 1 223 ASP n 1 224 VAL n 1 225 GLN n 1 226 ILE n 1 227 LYS n 1 228 GLU n 1 229 LEU n 1 230 PHE n 1 231 THR n 1 232 ASP n 1 233 ASP n 1 234 GLU n 1 235 ASP n 1 236 TYR n 1 237 LYS n 1 238 ALA n 1 239 PHE n 1 240 ASN n 1 241 GLU n 1 242 VAL n 1 243 THR n 1 244 ASP n 1 245 ILE n 1 246 LYS n 1 247 GLU n 1 248 LYS n 1 249 GLN n 1 250 GLN n 1 251 LEU n 1 252 ILE n 1 253 ASP n 1 254 PHE n 1 255 LYS n 1 256 THR n 1 257 TYR n 1 258 HIS n 1 259 GLY n 1 260 THR n 1 261 GLU n 1 262 ASN n 1 263 THR n 1 264 ILE n 1 265 GLU n 1 266 MSE n 1 267 LEU n 1 268 GLU n 1 269 THR n 1 270 GLY n 1 271 ASN n 1 272 PHE n 1 273 ILE n 1 274 PRO n 1 275 LYS n 1 276 TYR n 1 277 SER n 1 278 ASP n 1 279 GLU n 1 280 ASP n 1 281 ARG n 1 282 LYS n 1 283 TYR n 1 284 ILE n 1 285 THR n 1 286 GLU n 1 287 GLN n 1 288 VAL n 1 289 LYS n 1 290 LEU n 1 291 LEU n 1 292 GLN n 1 293 GLU n 1 294 LYS n 1 295 GLU n 1 296 PHE n 1 297 LYS n 1 298 PRO n 1 299 ASN n 1 300 LYS n 1 301 ASN n 1 302 GLN n 1 303 HIS n 1 304 ASP n 1 305 LYS n 1 306 PHE n 1 307 VAL n 1 308 PHE n 1 309 GLY n 1 310 ALA n 1 311 ILE n 1 312 GLN n 1 313 LYS n 1 314 LYS n 1 315 LEU n 1 316 LEU n 1 317 SER n 1 318 GLU n 1 319 TYR n 1 320 ASP n 1 321 PHE n 1 322 ASP n 1 323 TYR n 1 324 SER n 1 325 ASP n 1 326 ASN n 1 327 ASN n 1 328 ASP n 1 329 LEU n 1 330 LYS n 1 331 HIS n 1 332 LEU n 1 333 TYR n 1 334 GLN n 1 335 GLU n 1 336 SER n 1 337 ASN n 1 338 GLU n 1 339 VAL n 1 340 GLY n 1 341 ASP n 1 342 GLU n 1 343 ILE n 1 344 SER n 1 345 LYS n 1 346 ASP n 1 347 ASN n 1 348 ILE n 1 349 GLU n 1 350 GLU n 1 351 PHE n 1 352 TYR n 1 353 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'nes, NES from pLW1043, PGO1_p08, SAP014A_018, SAP015D_002, SAP068A_007, SAP069A_033, SAP079A_020, SAP080A_038, SAP082A_025, VRA0057' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Staphylococcus aureus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1280 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 AI' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pCPD-lasso _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code O87361_STAAU _struct_ref.pdbx_db_accession O87361 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;KLNAFSYMNKSDSTTLKNMAKDLKIYVTPINMYKENERLYDLKQKTSLITDDEDRLNKIEDIEDRQKKLESINEVFEKQA GIFFDKNYPDQSLNYSDDEKIFITRTILNDRDVLPANNELEDIVKEKRIKEAQISLNTVLGNRDISLESIEKESNFFADK LSNILEKNNLSFDDVLENKHEGMEDSLKIDYYTNKLEVFRNAENILEDYYDVQIKELFTDDEDYKAFNEVTDIKEKQQLI DFKTYHGTENTIEMLETGNFIPKYSDEDRKYITEQVKLLQEKEFKPNKNQHDKFVFGAIQKKLLSEYDFDYSDNNDLKHL YQESNEVGDEISKDNIEEFY ; _struct_ref.pdbx_align_begin 254 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4HTE _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 13 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 352 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O87361 _struct_ref_seq.db_align_beg 254 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 593 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 254 _struct_ref_seq.pdbx_auth_seq_align_end 593 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4HTE LEU A 1 ? UNP O87361 ? ? 'EXPRESSION TAG' 242 1 1 4HTE MSE A 2 ? UNP O87361 ? ? 'EXPRESSION TAG' 243 2 1 4HTE PHE A 3 ? UNP O87361 ? ? 'EXPRESSION TAG' 244 3 1 4HTE ASN A 4 ? UNP O87361 ? ? 'EXPRESSION TAG' 245 4 1 4HTE GLU A 5 ? UNP O87361 ? ? 'EXPRESSION TAG' 246 5 1 4HTE VAL A 6 ? UNP O87361 ? ? 'EXPRESSION TAG' 247 6 1 4HTE ASP A 7 ? UNP O87361 ? ? 'EXPRESSION TAG' 248 7 1 4HTE ASP A 8 ? UNP O87361 ? ? 'EXPRESSION TAG' 249 8 1 4HTE MSE A 9 ? UNP O87361 ? ? 'EXPRESSION TAG' 250 9 1 4HTE LYS A 10 ? UNP O87361 ? ? 'EXPRESSION TAG' 251 10 1 4HTE SER A 11 ? UNP O87361 ? ? 'EXPRESSION TAG' 252 11 1 4HTE HIS A 12 ? UNP O87361 ? ? 'EXPRESSION TAG' 253 12 1 4HTE GLU A 353 ? UNP O87361 ? ? 'EXPRESSION TAG' 594 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4HTE _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.14 _exptl_crystal.density_percent_sol 60.86 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '12-16% PEG 6000, 0.1 M Tris-HCl pH 8.0, 0.5 M LiCl, 12.5% glycerol, and 5% PEG-400, vapor diffusion, hanging drop, temperature 293K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type ? _diffrn_detector.pdbx_collection_date 2011-08 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'MULTIPLE WAVELENGTH ANOMALOUS SCATTERING' _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.97935 1.0 2 0.97954 1.0 3 0.94936 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 23-ID-B' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 23-ID-B _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list '0.97935,0.97954, 0.94936' # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4HTE _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 100.000 _reflns.d_resolution_high 3.000 _reflns.number_obs 11051 _reflns.number_all ? _reflns.percent_possible_obs 99.700 _reflns.pdbx_Rmerge_I_obs 0.083 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 8.200 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 9.400 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # loop_ _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_unique_obs _reflns_shell.pdbx_chi_squared 1 1 3.000 3.050 100.000 0.770 ? 2.8 9.700 ? ? ? ? ? ? 1 2 3.050 3.110 100.000 0.595 ? 4.06 9.700 ? ? ? ? ? ? 1 3 3.110 3.170 100.000 0.527 ? 4.06 9.600 ? ? ? ? ? ? 1 4 3.170 3.230 100.000 0.466 ? 4.9 9.700 ? ? ? ? ? ? 1 5 3.230 3.300 100.000 0.364 ? ? 9.600 ? ? ? ? ? ? 1 6 3.300 3.380 100.000 0.284 ? ? 9.600 ? ? ? ? ? ? 1 7 3.380 3.460 100.000 0.217 ? ? 9.600 ? ? ? ? ? ? 1 8 3.460 3.560 100.000 0.199 ? ? 9.600 ? ? ? ? ? ? 1 9 3.560 3.660 100.000 0.151 ? ? 9.700 ? ? ? ? ? ? 1 10 3.660 3.780 100.000 0.134 ? ? 9.500 ? ? ? ? ? ? 1 11 3.780 3.910 100.000 0.107 ? ? 9.500 ? ? ? ? ? ? 1 12 3.910 4.070 100.000 0.089 ? ? 9.600 ? ? ? ? ? ? 1 13 4.070 4.260 100.000 0.082 ? ? 9.500 ? ? ? ? ? ? 1 14 4.260 4.480 100.000 0.072 ? ? 9.400 ? ? ? ? ? ? 1 15 4.480 4.760 100.000 0.066 ? ? 9.400 ? ? ? ? ? ? 1 16 4.760 5.130 100.000 0.067 ? ? 9.300 ? ? ? ? ? ? 1 17 5.130 5.650 100.000 0.067 ? ? 9.300 ? ? ? ? ? ? 1 18 5.650 6.460 100.000 0.064 ? ? 9.100 ? ? ? ? ? ? 1 19 6.460 8.140 99.300 0.050 ? ? 8.900 ? ? ? ? ? ? 1 20 8.140 100.000 95.300 0.036 ? 70. 8.100 ? ? ? ? ? ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4HTE _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 10958 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.79 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 45.809 _refine.ls_d_res_high 3.000 _refine.ls_percent_reflns_obs 99.76 _refine.ls_R_factor_obs 0.2699 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2674 _refine.ls_R_factor_R_free 0.2916 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.01 _refine.ls_number_reflns_R_free 1097 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min 0.560 _refine.occupancy_max 1.000 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] -1.8312 _refine.aniso_B[2][2] -1.8312 _refine.aniso_B[3][3] 3.6623 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] -0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.298 _refine.solvent_model_param_bsol 18.338 _refine.pdbx_solvent_vdw_probe_radii 1.10 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.86 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.41 _refine.pdbx_overall_phase_error 29.20 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2675 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 2676 _refine_hist.d_res_high 3.000 _refine_hist.d_res_low 45.809 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.003 ? ? 2717 'X-RAY DIFFRACTION' ? f_angle_d 0.553 ? ? 3688 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 15.263 ? ? 977 'X-RAY DIFFRACTION' ? f_chiral_restr 0.036 ? ? 410 'X-RAY DIFFRACTION' ? f_plane_restr 0.001 ? ? 491 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.number_reflns_obs 'X-RAY DIFFRACTION' . 3.0001 3.1366 1210 0.3684 100.00 0.4302 . . 134 . . . . 'X-RAY DIFFRACTION' . 3.1366 3.3019 1188 0.3327 100.00 0.4064 . . 132 . . . . 'X-RAY DIFFRACTION' . 3.3019 3.5087 1205 0.2975 100.00 0.3093 . . 135 . . . . 'X-RAY DIFFRACTION' . 3.5087 3.7795 1223 0.2721 100.00 0.3105 . . 135 . . . . 'X-RAY DIFFRACTION' . 3.7795 4.1596 1210 0.2418 100.00 0.2456 . . 135 . . . . 'X-RAY DIFFRACTION' . 4.1596 4.7610 1239 0.2217 100.00 0.2358 . . 137 . . . . 'X-RAY DIFFRACTION' . 4.7610 5.9962 1251 0.2892 100.00 0.3181 . . 139 . . . . 'X-RAY DIFFRACTION' . 5.9962 45.8142 1335 0.2373 99.00 0.2547 . . 150 . . . . # _struct.entry_id 4HTE _struct.title 'Crystal Structure of the C-terminal domain of Nicking Enzyme from Staphylococcus aureus' _struct.pdbx_descriptor 'Nicking enzyme' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4HTE _struct_keywords.text 'vancomycin resistance plasmid, DNA relaxase, conjugative transfer, NES Cterminal domain, alpha-helical, Hydrolase' _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details 'biological unit is the same as asym.' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 21 ? LYS A 36 ? ASN A 262 LYS A 277 1 ? 16 HELX_P HELX_P2 2 THR A 40 ? SER A 59 ? THR A 281 SER A 300 1 ? 20 HELX_P HELX_P3 3 ASP A 63 ? TYR A 100 ? ASP A 304 TYR A 341 1 ? 38 HELX_P HELX_P4 4 SER A 108 ? ARG A 123 ? SER A 349 ARG A 364 1 ? 16 HELX_P HELX_P5 5 ASN A 129 ? GLY A 153 ? ASN A 370 GLY A 394 1 ? 25 HELX_P HELX_P6 6 SER A 158 ? ASN A 180 ? SER A 399 ASN A 421 1 ? 23 HELX_P HELX_P7 7 SER A 183 ? GLU A 189 ? SER A 424 GLU A 430 1 ? 7 HELX_P HELX_P8 8 ASP A 197 ? GLU A 228 ? ASP A 438 GLU A 469 1 ? 32 HELX_P HELX_P9 9 ASP A 232 ? THR A 243 ? ASP A 473 THR A 484 1 ? 12 HELX_P HELX_P10 10 ASP A 244 ? GLY A 270 ? ASP A 485 GLY A 511 1 ? 27 HELX_P HELX_P11 11 SER A 277 ? LYS A 294 ? SER A 518 LYS A 535 1 ? 18 HELX_P HELX_P12 12 ASN A 301 ? ASP A 320 ? ASN A 542 ASP A 561 1 ? 20 HELX_P HELX_P13 13 ASN A 326 ? GLY A 340 ? ASN A 567 GLY A 581 1 ? 15 HELX_P HELX_P14 14 ASP A 341 ? TYR A 352 ? ASP A 582 TYR A 593 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A TYR 19 C ? ? ? 1_555 A MSE 20 N ? ? A TYR 260 A MSE 261 1_555 ? ? ? ? ? ? ? 1.330 ? covale2 covale ? ? A MSE 20 C ? ? ? 1_555 A ASN 21 N ? ? A MSE 261 A ASN 262 1_555 ? ? ? ? ? ? ? 1.330 ? covale3 covale ? ? A ASN 30 C ? ? ? 1_555 A MSE 31 N ? ? A ASN 271 A MSE 272 1_555 ? ? ? ? ? ? ? 1.328 ? covale4 covale ? ? A MSE 31 C ? ? ? 1_555 A ALA 32 N ? ? A MSE 272 A ALA 273 1_555 ? ? ? ? ? ? ? 1.328 ? covale5 covale ? ? A ASN 43 C ? ? ? 1_555 A MSE 44 N ? ? A ASN 284 A MSE 285 1_555 ? ? ? ? ? ? ? 1.328 ? covale6 covale ? ? A MSE 44 C ? ? ? 1_555 A TYR 45 N ? ? A MSE 285 A TYR 286 1_555 ? ? ? ? ? ? ? 1.327 ? covale7 covale ? ? A GLY 194 C ? ? ? 1_555 A MSE 195 N ? ? A GLY 435 A MSE 436 1_555 ? ? ? ? ? ? ? 1.328 ? covale8 covale ? ? A MSE 195 C ? ? ? 1_555 A GLU 196 N ? ? A MSE 436 A GLU 437 1_555 ? ? ? ? ? ? ? 1.328 ? covale9 covale ? ? A GLU 265 C ? ? ? 1_555 A MSE 266 N ? ? A GLU 506 A MSE 507 1_555 ? ? ? ? ? ? ? 1.328 ? covale10 covale ? ? A MSE 266 C ? ? ? 1_555 A LEU 267 N ? ? A MSE 507 A LEU 508 1_555 ? ? ? ? ? ? ? 1.329 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 1 _struct_site.details 'BINDING SITE FOR RESIDUE CA A 601' # _struct_site_gen.id 1 _struct_site_gen.site_id AC1 _struct_site_gen.pdbx_num_res 1 _struct_site_gen.label_comp_id ASP _struct_site_gen.label_asym_id A _struct_site_gen.label_seq_id 320 _struct_site_gen.pdbx_auth_ins_code ? _struct_site_gen.auth_comp_id ASP _struct_site_gen.auth_asym_id A _struct_site_gen.auth_seq_id 561 _struct_site_gen.label_atom_id . _struct_site_gen.label_alt_id ? _struct_site_gen.symmetry 1_555 _struct_site_gen.details ? # _atom_sites.entry_id 4HTE _atom_sites.fract_transf_matrix[1][1] 0.013283 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013283 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005560 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA H N O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LEU 1 242 ? ? ? A . n A 1 2 MSE 2 243 ? ? ? A . n A 1 3 PHE 3 244 ? ? ? A . n A 1 4 ASN 4 245 ? ? ? A . n A 1 5 GLU 5 246 ? ? ? A . n A 1 6 VAL 6 247 ? ? ? A . n A 1 7 ASP 7 248 ? ? ? A . n A 1 8 ASP 8 249 ? ? ? A . n A 1 9 MSE 9 250 ? ? ? A . n A 1 10 LYS 10 251 ? ? ? A . n A 1 11 SER 11 252 ? ? ? A . n A 1 12 HIS 12 253 ? ? ? A . n A 1 13 LYS 13 254 254 LYS LYS A . n A 1 14 LEU 14 255 255 LEU LEU A . n A 1 15 ASN 15 256 256 ASN ASN A . n A 1 16 ALA 16 257 257 ALA ALA A . n A 1 17 PHE 17 258 258 PHE PHE A . n A 1 18 SER 18 259 259 SER SER A . n A 1 19 TYR 19 260 260 TYR TYR A . n A 1 20 MSE 20 261 261 MSE MSE A . n A 1 21 ASN 21 262 262 ASN ASN A . n A 1 22 LYS 22 263 263 LYS LYS A . n A 1 23 SER 23 264 264 SER SER A . n A 1 24 ASP 24 265 265 ASP ASP A . n A 1 25 SER 25 266 266 SER SER A . n A 1 26 THR 26 267 267 THR THR A . n A 1 27 THR 27 268 268 THR THR A . n A 1 28 LEU 28 269 269 LEU LEU A . n A 1 29 LYS 29 270 270 LYS LYS A . n A 1 30 ASN 30 271 271 ASN ASN A . n A 1 31 MSE 31 272 272 MSE MSE A . n A 1 32 ALA 32 273 273 ALA ALA A . n A 1 33 LYS 33 274 274 LYS LYS A . n A 1 34 ASP 34 275 275 ASP ASP A . n A 1 35 LEU 35 276 276 LEU LEU A . n A 1 36 LYS 36 277 277 LYS LYS A . n A 1 37 ILE 37 278 278 ILE ILE A . n A 1 38 TYR 38 279 279 TYR TYR A . n A 1 39 VAL 39 280 280 VAL VAL A . n A 1 40 THR 40 281 281 THR THR A . n A 1 41 PRO 41 282 282 PRO PRO A . n A 1 42 ILE 42 283 283 ILE ILE A . n A 1 43 ASN 43 284 284 ASN ASN A . n A 1 44 MSE 44 285 285 MSE MSE A . n A 1 45 TYR 45 286 286 TYR TYR A . n A 1 46 LYS 46 287 287 LYS LYS A . n A 1 47 GLU 47 288 288 GLU GLU A . n A 1 48 ASN 48 289 289 ASN ASN A . n A 1 49 GLU 49 290 290 GLU GLU A . n A 1 50 ARG 50 291 291 ARG ARG A . n A 1 51 LEU 51 292 292 LEU LEU A . n A 1 52 TYR 52 293 293 TYR TYR A . n A 1 53 ASP 53 294 294 ASP ASP A . n A 1 54 LEU 54 295 295 LEU LEU A . n A 1 55 LYS 55 296 296 LYS LYS A . n A 1 56 GLN 56 297 297 GLN GLN A . n A 1 57 LYS 57 298 298 LYS LYS A . n A 1 58 THR 58 299 299 THR THR A . n A 1 59 SER 59 300 300 SER SER A . n A 1 60 LEU 60 301 301 LEU LEU A . n A 1 61 ILE 61 302 302 ILE ALA A . n A 1 62 THR 62 303 303 THR THR A . n A 1 63 ASP 63 304 304 ASP ASP A . n A 1 64 ASP 64 305 305 ASP ASP A . n A 1 65 GLU 65 306 306 GLU GLU A . n A 1 66 ASP 66 307 307 ASP ASP A . n A 1 67 ARG 67 308 308 ARG ARG A . n A 1 68 LEU 68 309 309 LEU LEU A . n A 1 69 ASN 69 310 310 ASN ASN A . n A 1 70 LYS 70 311 311 LYS LYS A . n A 1 71 ILE 71 312 312 ILE ILE A . n A 1 72 GLU 72 313 313 GLU GLU A . n A 1 73 ASP 73 314 314 ASP ASP A . n A 1 74 ILE 74 315 315 ILE ILE A . n A 1 75 GLU 75 316 316 GLU GLU A . n A 1 76 ASP 76 317 317 ASP ASP A . n A 1 77 ARG 77 318 318 ARG ARG A . n A 1 78 GLN 78 319 319 GLN GLN A . n A 1 79 LYS 79 320 320 LYS LYS A . n A 1 80 LYS 80 321 321 LYS LYS A . n A 1 81 LEU 81 322 322 LEU LEU A . n A 1 82 GLU 82 323 323 GLU GLU A . n A 1 83 SER 83 324 324 SER SER A . n A 1 84 ILE 84 325 325 ILE ILE A . n A 1 85 ASN 85 326 326 ASN ASN A . n A 1 86 GLU 86 327 327 GLU GLU A . n A 1 87 VAL 87 328 328 VAL VAL A . n A 1 88 PHE 88 329 329 PHE PHE A . n A 1 89 GLU 89 330 330 GLU GLU A . n A 1 90 LYS 90 331 331 LYS LYS A . n A 1 91 GLN 91 332 332 GLN GLN A . n A 1 92 ALA 92 333 333 ALA ALA A . n A 1 93 GLY 93 334 334 GLY GLY A . n A 1 94 ILE 94 335 335 ILE ILE A . n A 1 95 PHE 95 336 336 PHE PHE A . n A 1 96 PHE 96 337 337 PHE PHE A . n A 1 97 ASP 97 338 338 ASP ASP A . n A 1 98 LYS 98 339 339 LYS LYS A . n A 1 99 ASN 99 340 340 ASN ASN A . n A 1 100 TYR 100 341 341 TYR TYR A . n A 1 101 PRO 101 342 342 PRO PRO A . n A 1 102 ASP 102 343 343 ASP ASP A . n A 1 103 GLN 103 344 344 GLN GLN A . n A 1 104 SER 104 345 345 SER SER A . n A 1 105 LEU 105 346 346 LEU LEU A . n A 1 106 ASN 106 347 347 ASN ASN A . n A 1 107 TYR 107 348 348 TYR TYR A . n A 1 108 SER 108 349 349 SER SER A . n A 1 109 ASP 109 350 350 ASP ASP A . n A 1 110 ASP 110 351 351 ASP ASP A . n A 1 111 GLU 111 352 352 GLU GLU A . n A 1 112 LYS 112 353 353 LYS LYS A . n A 1 113 ILE 113 354 354 ILE ILE A . n A 1 114 PHE 114 355 355 PHE PHE A . n A 1 115 ILE 115 356 356 ILE ILE A . n A 1 116 THR 116 357 357 THR THR A . n A 1 117 ARG 117 358 358 ARG ARG A . n A 1 118 THR 118 359 359 THR THR A . n A 1 119 ILE 119 360 360 ILE ILE A . n A 1 120 LEU 120 361 361 LEU LEU A . n A 1 121 ASN 121 362 362 ASN ASN A . n A 1 122 ASP 122 363 363 ASP ASP A . n A 1 123 ARG 123 364 364 ARG ARG A . n A 1 124 ASP 124 365 365 ASP ASP A . n A 1 125 VAL 125 366 366 VAL VAL A . n A 1 126 LEU 126 367 367 LEU LEU A . n A 1 127 PRO 127 368 368 PRO ALA A . n A 1 128 ALA 128 369 369 ALA ALA A . n A 1 129 ASN 129 370 370 ASN ASN A . n A 1 130 ASN 130 371 371 ASN ASN A . n A 1 131 GLU 131 372 372 GLU GLU A . n A 1 132 LEU 132 373 373 LEU LEU A . n A 1 133 GLU 133 374 374 GLU GLU A . n A 1 134 ASP 134 375 375 ASP ASP A . n A 1 135 ILE 135 376 376 ILE ILE A . n A 1 136 VAL 136 377 377 VAL VAL A . n A 1 137 LYS 137 378 378 LYS LYS A . n A 1 138 GLU 138 379 379 GLU GLU A . n A 1 139 LYS 139 380 380 LYS LYS A . n A 1 140 ARG 140 381 381 ARG ARG A . n A 1 141 ILE 141 382 382 ILE ILE A . n A 1 142 LYS 142 383 383 LYS LYS A . n A 1 143 GLU 143 384 384 GLU GLU A . n A 1 144 ALA 144 385 385 ALA ALA A . n A 1 145 GLN 145 386 386 GLN GLN A . n A 1 146 ILE 146 387 387 ILE ILE A . n A 1 147 SER 147 388 388 SER SER A . n A 1 148 LEU 148 389 389 LEU LEU A . n A 1 149 ASN 149 390 390 ASN ASN A . n A 1 150 THR 150 391 391 THR THR A . n A 1 151 VAL 151 392 392 VAL VAL A . n A 1 152 LEU 152 393 393 LEU LEU A . n A 1 153 GLY 153 394 394 GLY GLY A . n A 1 154 ASN 154 395 395 ASN ASN A . n A 1 155 ARG 155 396 396 ARG ARG A . n A 1 156 ASP 156 397 397 ASP ASP A . n A 1 157 ILE 157 398 398 ILE ILE A . n A 1 158 SER 158 399 399 SER SER A . n A 1 159 LEU 159 400 400 LEU LEU A . n A 1 160 GLU 160 401 401 GLU GLU A . n A 1 161 SER 161 402 402 SER SER A . n A 1 162 ILE 162 403 403 ILE ILE A . n A 1 163 ALA 163 404 404 ALA ALA A . n A 1 164 ALA 164 405 405 ALA ALA A . n A 1 165 ALA 165 406 406 ALA ALA A . n A 1 166 SER 166 407 407 SER SER A . n A 1 167 ASN 167 408 408 ASN ASN A . n A 1 168 PHE 168 409 409 PHE PHE A . n A 1 169 PHE 169 410 410 PHE PHE A . n A 1 170 ALA 170 411 411 ALA ALA A . n A 1 171 ASP 171 412 412 ASP ASP A . n A 1 172 LYS 172 413 413 LYS LYS A . n A 1 173 LEU 173 414 414 LEU LEU A . n A 1 174 SER 174 415 415 SER SER A . n A 1 175 ASN 175 416 416 ASN ASN A . n A 1 176 ILE 176 417 417 ILE ILE A . n A 1 177 LEU 177 418 418 LEU LEU A . n A 1 178 GLU 178 419 419 GLU GLU A . n A 1 179 LYS 179 420 420 LYS LYS A . n A 1 180 ASN 180 421 421 ASN ASN A . n A 1 181 ASN 181 422 422 ASN ASN A . n A 1 182 LEU 182 423 423 LEU LEU A . n A 1 183 SER 183 424 424 SER SER A . n A 1 184 PHE 184 425 425 PHE PHE A . n A 1 185 ASP 185 426 426 ASP ASP A . n A 1 186 ASP 186 427 427 ASP ASP A . n A 1 187 VAL 187 428 428 VAL VAL A . n A 1 188 LEU 188 429 429 LEU LEU A . n A 1 189 GLU 189 430 430 GLU GLU A . n A 1 190 ASN 190 431 431 ASN ASN A . n A 1 191 LYS 191 432 432 LYS LYS A . n A 1 192 HIS 192 433 433 HIS HIS A . n A 1 193 GLU 193 434 434 GLU GLU A . n A 1 194 GLY 194 435 435 GLY GLY A . n A 1 195 MSE 195 436 436 MSE MSE A . n A 1 196 GLU 196 437 437 GLU GLU A . n A 1 197 ASP 197 438 438 ASP ASP A . n A 1 198 SER 198 439 439 SER SER A . n A 1 199 LEU 199 440 440 LEU LEU A . n A 1 200 LYS 200 441 441 LYS LYS A . n A 1 201 ILE 201 442 442 ILE ILE A . n A 1 202 ASP 202 443 443 ASP ASP A . n A 1 203 TYR 203 444 444 TYR TYR A . n A 1 204 TYR 204 445 445 TYR TYR A . n A 1 205 THR 205 446 446 THR THR A . n A 1 206 ASN 206 447 447 ASN ASN A . n A 1 207 LYS 207 448 448 LYS LYS A . n A 1 208 LEU 208 449 449 LEU LEU A . n A 1 209 GLU 209 450 450 GLU GLU A . n A 1 210 VAL 210 451 451 VAL VAL A . n A 1 211 PHE 211 452 452 PHE PHE A . n A 1 212 ARG 212 453 453 ARG ARG A . n A 1 213 ASN 213 454 454 ASN ASN A . n A 1 214 ALA 214 455 455 ALA ALA A . n A 1 215 GLU 215 456 456 GLU GLU A . n A 1 216 ASN 216 457 457 ASN ASN A . n A 1 217 ILE 217 458 458 ILE ILE A . n A 1 218 LEU 218 459 459 LEU LEU A . n A 1 219 GLU 219 460 460 GLU GLU A . n A 1 220 ASP 220 461 461 ASP ASP A . n A 1 221 TYR 221 462 462 TYR TYR A . n A 1 222 TYR 222 463 463 TYR TYR A . n A 1 223 ASP 223 464 464 ASP ASP A . n A 1 224 VAL 224 465 465 VAL VAL A . n A 1 225 GLN 225 466 466 GLN GLN A . n A 1 226 ILE 226 467 467 ILE ILE A . n A 1 227 LYS 227 468 468 LYS LYS A . n A 1 228 GLU 228 469 469 GLU GLU A . n A 1 229 LEU 229 470 470 LEU LEU A . n A 1 230 PHE 230 471 471 PHE PHE A . n A 1 231 THR 231 472 472 THR THR A . n A 1 232 ASP 232 473 473 ASP ASP A . n A 1 233 ASP 233 474 474 ASP ASP A . n A 1 234 GLU 234 475 475 GLU GLU A . n A 1 235 ASP 235 476 476 ASP ASP A . n A 1 236 TYR 236 477 477 TYR TYR A . n A 1 237 LYS 237 478 478 LYS LYS A . n A 1 238 ALA 238 479 479 ALA ALA A . n A 1 239 PHE 239 480 480 PHE PHE A . n A 1 240 ASN 240 481 481 ASN ASN A . n A 1 241 GLU 241 482 482 GLU GLU A . n A 1 242 VAL 242 483 483 VAL VAL A . n A 1 243 THR 243 484 484 THR THR A . n A 1 244 ASP 244 485 485 ASP ASP A . n A 1 245 ILE 245 486 486 ILE ILE A . n A 1 246 LYS 246 487 487 LYS LYS A . n A 1 247 GLU 247 488 488 GLU GLU A . n A 1 248 LYS 248 489 489 LYS LYS A . n A 1 249 GLN 249 490 490 GLN GLN A . n A 1 250 GLN 250 491 491 GLN GLN A . n A 1 251 LEU 251 492 492 LEU LEU A . n A 1 252 ILE 252 493 493 ILE ILE A . n A 1 253 ASP 253 494 494 ASP ASP A . n A 1 254 PHE 254 495 495 PHE PHE A . n A 1 255 LYS 255 496 496 LYS LYS A . n A 1 256 THR 256 497 497 THR THR A . n A 1 257 TYR 257 498 498 TYR TYR A . n A 1 258 HIS 258 499 499 HIS HIS A . n A 1 259 GLY 259 500 500 GLY GLY A . n A 1 260 THR 260 501 501 THR THR A . n A 1 261 GLU 261 502 502 GLU GLU A . n A 1 262 ASN 262 503 503 ASN ASN A . n A 1 263 THR 263 504 504 THR THR A . n A 1 264 ILE 264 505 505 ILE ILE A . n A 1 265 GLU 265 506 506 GLU GLU A . n A 1 266 MSE 266 507 507 MSE MSE A . n A 1 267 LEU 267 508 508 LEU LEU A . n A 1 268 GLU 268 509 509 GLU GLU A . n A 1 269 THR 269 510 510 THR THR A . n A 1 270 GLY 270 511 511 GLY GLY A . n A 1 271 ASN 271 512 512 ASN ASN A . n A 1 272 PHE 272 513 513 PHE PHE A . n A 1 273 ILE 273 514 514 ILE ILE A . n A 1 274 PRO 274 515 515 PRO PRO A . n A 1 275 LYS 275 516 516 LYS LYS A . n A 1 276 TYR 276 517 517 TYR TYR A . n A 1 277 SER 277 518 518 SER SER A . n A 1 278 ASP 278 519 519 ASP ASP A . n A 1 279 GLU 279 520 520 GLU GLU A . n A 1 280 ASP 280 521 521 ASP ASP A . n A 1 281 ARG 281 522 522 ARG ARG A . n A 1 282 LYS 282 523 523 LYS LYS A . n A 1 283 TYR 283 524 524 TYR TYR A . n A 1 284 ILE 284 525 525 ILE ILE A . n A 1 285 THR 285 526 526 THR THR A . n A 1 286 GLU 286 527 527 GLU GLU A . n A 1 287 GLN 287 528 528 GLN GLN A . n A 1 288 VAL 288 529 529 VAL VAL A . n A 1 289 LYS 289 530 530 LYS LYS A . n A 1 290 LEU 290 531 531 LEU LEU A . n A 1 291 LEU 291 532 532 LEU LEU A . n A 1 292 GLN 292 533 533 GLN GLN A . n A 1 293 GLU 293 534 534 GLU GLU A . n A 1 294 LYS 294 535 535 LYS LYS A . n A 1 295 GLU 295 536 536 GLU GLU A . n A 1 296 PHE 296 537 537 PHE PHE A . n A 1 297 LYS 297 538 538 LYS LYS A . n A 1 298 PRO 298 539 539 PRO PRO A . n A 1 299 ASN 299 540 540 ASN ASN A . n A 1 300 LYS 300 541 541 LYS LYS A . n A 1 301 ASN 301 542 542 ASN ASN A . n A 1 302 GLN 302 543 543 GLN GLN A . n A 1 303 HIS 303 544 544 HIS HIS A . n A 1 304 ASP 304 545 545 ASP ASP A . n A 1 305 LYS 305 546 546 LYS LYS A . n A 1 306 PHE 306 547 547 PHE PHE A . n A 1 307 VAL 307 548 548 VAL VAL A . n A 1 308 PHE 308 549 549 PHE PHE A . n A 1 309 GLY 309 550 550 GLY GLY A . n A 1 310 ALA 310 551 551 ALA ALA A . n A 1 311 ILE 311 552 552 ILE ILE A . n A 1 312 GLN 312 553 553 GLN GLN A . n A 1 313 LYS 313 554 554 LYS LYS A . n A 1 314 LYS 314 555 555 LYS LYS A . n A 1 315 LEU 315 556 556 LEU LEU A . n A 1 316 LEU 316 557 557 LEU LEU A . n A 1 317 SER 317 558 558 SER SER A . n A 1 318 GLU 318 559 559 GLU GLU A . n A 1 319 TYR 319 560 560 TYR TYR A . n A 1 320 ASP 320 561 561 ASP ASP A . n A 1 321 PHE 321 562 562 PHE PHE A . n A 1 322 ASP 322 563 563 ASP ASP A . n A 1 323 TYR 323 564 564 TYR TYR A . n A 1 324 SER 324 565 565 SER SER A . n A 1 325 ASP 325 566 566 ASP ASP A . n A 1 326 ASN 326 567 567 ASN ASN A . n A 1 327 ASN 327 568 568 ASN ASN A . n A 1 328 ASP 328 569 569 ASP ASP A . n A 1 329 LEU 329 570 570 LEU LEU A . n A 1 330 LYS 330 571 571 LYS LYS A . n A 1 331 HIS 331 572 572 HIS HIS A . n A 1 332 LEU 332 573 573 LEU LEU A . n A 1 333 TYR 333 574 574 TYR TYR A . n A 1 334 GLN 334 575 575 GLN GLN A . n A 1 335 GLU 335 576 576 GLU GLU A . n A 1 336 SER 336 577 577 SER SER A . n A 1 337 ASN 337 578 578 ASN ASN A . n A 1 338 GLU 338 579 579 GLU GLU A . n A 1 339 VAL 339 580 580 VAL VAL A . n A 1 340 GLY 340 581 581 GLY GLY A . n A 1 341 ASP 341 582 582 ASP ASP A . n A 1 342 GLU 342 583 583 GLU GLU A . n A 1 343 ILE 343 584 584 ILE ILE A . n A 1 344 SER 344 585 585 SER SER A . n A 1 345 LYS 345 586 586 LYS LYS A . n A 1 346 ASP 346 587 587 ASP ASP A . n A 1 347 ASN 347 588 588 ASN ASN A . n A 1 348 ILE 348 589 589 ILE ILE A . n A 1 349 GLU 349 590 590 GLU GLU A . n A 1 350 GLU 350 591 591 GLU GLU A . n A 1 351 PHE 351 592 592 PHE PHE A . n A 1 352 TYR 352 593 593 TYR TYR A . n A 1 353 GLU 353 594 ? ? ? A . n # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id CA _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 601 _pdbx_nonpoly_scheme.auth_seq_num 1 _pdbx_nonpoly_scheme.pdb_mon_id CA _pdbx_nonpoly_scheme.auth_mon_id CA _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 20 A MSE 261 ? MET SELENOMETHIONINE 2 A MSE 31 A MSE 272 ? MET SELENOMETHIONINE 3 A MSE 44 A MSE 285 ? MET SELENOMETHIONINE 4 A MSE 195 A MSE 436 ? MET SELENOMETHIONINE 5 A MSE 266 A MSE 507 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-01-30 2 'Structure model' 1 1 2013-02-13 3 'Structure model' 1 2 2013-03-06 4 'Structure model' 1 3 2017-11-15 5 'Structure model' 1 4 2018-04-04 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Refinement description' 4 5 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' diffrn_source # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.classification' 2 4 'Structure model' '_software.contact_author' 3 4 'Structure model' '_software.contact_author_email' 4 4 'Structure model' '_software.date' 5 4 'Structure model' '_software.language' 6 4 'Structure model' '_software.location' 7 4 'Structure model' '_software.name' 8 4 'Structure model' '_software.type' 9 4 'Structure model' '_software.version' 10 5 'Structure model' '_diffrn_source.pdbx_synchrotron_beamline' 11 5 'Structure model' '_diffrn_source.type' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 52.5715 9.8758 169.6853 1.3643 0.1981 0.4449 -0.1389 0.2309 0.0440 1.1466 2.4054 1.6034 0.9526 0.0562 -0.6510 0.0754 -1.0759 0.2304 0.5547 -0.1568 0.1308 0.4763 -0.1402 0.1541 'X-RAY DIFFRACTION' 2 ? refined 68.3403 30.3374 163.4201 0.8126 0.2347 0.3598 -0.0611 0.1099 -0.0125 2.7167 2.8324 2.6023 -1.6422 -0.8524 0.8951 0.0827 -0.2619 -0.1046 0.4867 -0.0131 0.0339 -0.2494 0.9393 0.0204 'X-RAY DIFFRACTION' 3 ? refined 80.9071 26.1326 137.8020 0.5526 0.6873 0.3858 -0.0962 0.1316 0.0030 5.2117 2.6152 4.6648 1.1900 1.8731 0.9180 0.0806 -0.1306 0.1881 -0.0043 0.1747 -0.3090 -0.9039 0.3779 -0.1383 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? ;chain 'A' and ((resseq 254:389)) ; 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? ;chain 'A' and ((resseq 395:514)) ; 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? ;chain 'A' and ((resseq 516:593)) ; # _phasing.method MAD # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 SOLVE . ? program 'Tom Terwilliger' terwilliger@LANL.gov phasing http://www.solve.lanl.gov/ ? ? 4 RESOLVE . ? program 'Thomas C. Terwilliger' terwilliger@lanl.gov phasing http://www.solve.lanl.gov/ ? ? 5 PHENIX 1.7.3_928 ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 6 PDB_EXTRACT 3.11 'April 22, 2011' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A GLY 500 ? ? OG1 A THR 504 ? ? 2.00 2 1 O A PHE 355 ? ? OG1 A THR 359 ? ? 2.15 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ILE A 302 ? ? -16.34 -57.31 2 1 THR A 303 ? ? 103.88 -53.96 3 1 ASP A 304 ? ? -57.89 100.07 4 1 VAL A 366 ? ? 68.11 -162.92 5 1 PRO A 368 ? ? -42.07 -72.51 6 1 ALA A 369 ? ? 105.81 108.82 7 1 ASN A 370 ? ? 16.83 -75.39 8 1 ASP A 561 ? ? 81.98 34.29 9 1 ASN A 567 ? ? 83.88 -11.05 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 270 ? CG ? A LYS 29 CG 2 1 Y 1 A LYS 270 ? CD ? A LYS 29 CD 3 1 Y 1 A LYS 270 ? CE ? A LYS 29 CE 4 1 Y 1 A LYS 270 ? NZ ? A LYS 29 NZ 5 1 Y 1 A LYS 274 ? CG ? A LYS 33 CG 6 1 Y 1 A LYS 274 ? CD ? A LYS 33 CD 7 1 Y 1 A LYS 274 ? CE ? A LYS 33 CE 8 1 Y 1 A LYS 274 ? NZ ? A LYS 33 NZ 9 1 Y 1 A LYS 277 ? CG ? A LYS 36 CG 10 1 Y 1 A LYS 277 ? CD ? A LYS 36 CD 11 1 Y 1 A LYS 277 ? CE ? A LYS 36 CE 12 1 Y 1 A LYS 277 ? NZ ? A LYS 36 NZ 13 1 Y 1 A LYS 296 ? CG ? A LYS 55 CG 14 1 Y 1 A LYS 296 ? CD ? A LYS 55 CD 15 1 Y 1 A LYS 296 ? CE ? A LYS 55 CE 16 1 Y 1 A LYS 296 ? NZ ? A LYS 55 NZ 17 1 Y 1 A ILE 302 ? CG1 ? A ILE 61 CG1 18 1 Y 1 A ILE 302 ? CG2 ? A ILE 61 CG2 19 1 Y 1 A ILE 302 ? CD1 ? A ILE 61 CD1 20 1 Y 1 A ASP 304 ? CG ? A ASP 63 CG 21 1 Y 1 A ASP 304 ? OD1 ? A ASP 63 OD1 22 1 Y 1 A ASP 304 ? OD2 ? A ASP 63 OD2 23 1 Y 1 A ASP 305 ? CG ? A ASP 64 CG 24 1 Y 1 A ASP 305 ? OD1 ? A ASP 64 OD1 25 1 Y 1 A ASP 305 ? OD2 ? A ASP 64 OD2 26 1 Y 1 A GLU 306 ? CG ? A GLU 65 CG 27 1 Y 1 A GLU 306 ? CD ? A GLU 65 CD 28 1 Y 1 A GLU 306 ? OE1 ? A GLU 65 OE1 29 1 Y 1 A GLU 306 ? OE2 ? A GLU 65 OE2 30 1 Y 1 A LEU 309 ? CG ? A LEU 68 CG 31 1 Y 1 A LEU 309 ? CD1 ? A LEU 68 CD1 32 1 Y 1 A LEU 309 ? CD2 ? A LEU 68 CD2 33 1 Y 1 A ASN 310 ? CG ? A ASN 69 CG 34 1 Y 1 A ASN 310 ? OD1 ? A ASN 69 OD1 35 1 Y 1 A ASN 310 ? ND2 ? A ASN 69 ND2 36 1 Y 1 A LYS 311 ? CG ? A LYS 70 CG 37 1 Y 1 A LYS 311 ? CD ? A LYS 70 CD 38 1 Y 1 A LYS 311 ? CE ? A LYS 70 CE 39 1 Y 1 A LYS 311 ? NZ ? A LYS 70 NZ 40 1 Y 1 A ILE 312 ? CG1 ? A ILE 71 CG1 41 1 Y 1 A ILE 312 ? CG2 ? A ILE 71 CG2 42 1 Y 1 A ILE 312 ? CD1 ? A ILE 71 CD1 43 1 Y 1 A GLU 313 ? CG ? A GLU 72 CG 44 1 Y 1 A GLU 313 ? CD ? A GLU 72 CD 45 1 Y 1 A GLU 313 ? OE1 ? A GLU 72 OE1 46 1 Y 1 A GLU 313 ? OE2 ? A GLU 72 OE2 47 1 Y 1 A GLU 316 ? CG ? A GLU 75 CG 48 1 Y 1 A GLU 316 ? CD ? A GLU 75 CD 49 1 Y 1 A GLU 316 ? OE1 ? A GLU 75 OE1 50 1 Y 1 A GLU 316 ? OE2 ? A GLU 75 OE2 51 1 Y 1 A ASP 317 ? CG ? A ASP 76 CG 52 1 Y 1 A ASP 317 ? OD1 ? A ASP 76 OD1 53 1 Y 1 A ASP 317 ? OD2 ? A ASP 76 OD2 54 1 Y 1 A LYS 320 ? CG ? A LYS 79 CG 55 1 Y 1 A LYS 320 ? CD ? A LYS 79 CD 56 1 Y 1 A LYS 320 ? CE ? A LYS 79 CE 57 1 Y 1 A LYS 320 ? NZ ? A LYS 79 NZ 58 1 Y 1 A VAL 366 ? CG1 ? A VAL 125 CG1 59 1 Y 1 A VAL 366 ? CG2 ? A VAL 125 CG2 60 1 Y 1 A PRO 368 ? CG ? A PRO 127 CG 61 1 Y 1 A PRO 368 ? CD ? A PRO 127 CD 62 1 Y 1 A ASN 371 ? CG ? A ASN 130 CG 63 1 Y 1 A ASN 371 ? OD1 ? A ASN 130 OD1 64 1 Y 1 A ASN 371 ? ND2 ? A ASN 130 ND2 65 1 Y 1 A GLU 372 ? CG ? A GLU 131 CG 66 1 Y 1 A GLU 372 ? CD ? A GLU 131 CD 67 1 Y 1 A GLU 372 ? OE1 ? A GLU 131 OE1 68 1 Y 1 A GLU 372 ? OE2 ? A GLU 131 OE2 69 1 Y 1 A ARG 381 ? CG ? A ARG 140 CG 70 1 Y 1 A ARG 381 ? CD ? A ARG 140 CD 71 1 Y 1 A ARG 381 ? NE ? A ARG 140 NE 72 1 Y 1 A ARG 381 ? CZ ? A ARG 140 CZ 73 1 Y 1 A ARG 381 ? NH1 ? A ARG 140 NH1 74 1 Y 1 A ARG 381 ? NH2 ? A ARG 140 NH2 75 1 Y 1 A LYS 468 ? CG ? A LYS 227 CG 76 1 Y 1 A LYS 468 ? CD ? A LYS 227 CD 77 1 Y 1 A LYS 468 ? CE ? A LYS 227 CE 78 1 Y 1 A LYS 468 ? NZ ? A LYS 227 NZ 79 1 Y 1 A THR 472 ? OG1 ? A THR 231 OG1 80 1 Y 1 A THR 472 ? CG2 ? A THR 231 CG2 81 1 Y 1 A ASP 473 ? CG ? A ASP 232 CG 82 1 Y 1 A ASP 473 ? OD1 ? A ASP 232 OD1 83 1 Y 1 A ASP 473 ? OD2 ? A ASP 232 OD2 84 1 Y 1 A ASP 474 ? CG ? A ASP 233 CG 85 1 Y 1 A ASP 474 ? OD1 ? A ASP 233 OD1 86 1 Y 1 A ASP 474 ? OD2 ? A ASP 233 OD2 87 1 Y 1 A GLU 475 ? CG ? A GLU 234 CG 88 1 Y 1 A GLU 475 ? CD ? A GLU 234 CD 89 1 Y 1 A GLU 475 ? OE1 ? A GLU 234 OE1 90 1 Y 1 A GLU 475 ? OE2 ? A GLU 234 OE2 91 1 Y 1 A LYS 478 ? CG ? A LYS 237 CG 92 1 Y 1 A LYS 478 ? CD ? A LYS 237 CD 93 1 Y 1 A LYS 478 ? CE ? A LYS 237 CE 94 1 Y 1 A LYS 478 ? NZ ? A LYS 237 NZ 95 1 Y 1 A GLU 482 ? CG ? A GLU 241 CG 96 1 Y 1 A GLU 482 ? CD ? A GLU 241 CD 97 1 Y 1 A GLU 482 ? OE1 ? A GLU 241 OE1 98 1 Y 1 A GLU 482 ? OE2 ? A GLU 241 OE2 99 1 Y 1 A LYS 487 ? CG ? A LYS 246 CG 100 1 Y 1 A LYS 487 ? CD ? A LYS 246 CD 101 1 Y 1 A LYS 487 ? CE ? A LYS 246 CE 102 1 Y 1 A LYS 487 ? NZ ? A LYS 246 NZ 103 1 Y 1 A GLU 488 ? CG ? A GLU 247 CG 104 1 Y 1 A GLU 488 ? CD ? A GLU 247 CD 105 1 Y 1 A GLU 488 ? OE1 ? A GLU 247 OE1 106 1 Y 1 A GLU 488 ? OE2 ? A GLU 247 OE2 107 1 Y 1 A GLU 520 ? CG ? A GLU 279 CG 108 1 Y 1 A GLU 520 ? CD ? A GLU 279 CD 109 1 Y 1 A GLU 520 ? OE1 ? A GLU 279 OE1 110 1 Y 1 A GLU 520 ? OE2 ? A GLU 279 OE2 111 1 Y 1 A LYS 523 ? CG ? A LYS 282 CG 112 1 Y 1 A LYS 523 ? CD ? A LYS 282 CD 113 1 Y 1 A LYS 523 ? CE ? A LYS 282 CE 114 1 Y 1 A LYS 523 ? NZ ? A LYS 282 NZ 115 1 Y 1 A LYS 530 ? CG ? A LYS 289 CG 116 1 Y 1 A LYS 530 ? CD ? A LYS 289 CD 117 1 Y 1 A LYS 530 ? CE ? A LYS 289 CE 118 1 Y 1 A LYS 530 ? NZ ? A LYS 289 NZ 119 1 Y 1 A LYS 535 ? CG ? A LYS 294 CG 120 1 Y 1 A LYS 535 ? CD ? A LYS 294 CD 121 1 Y 1 A LYS 535 ? CE ? A LYS 294 CE 122 1 Y 1 A LYS 535 ? NZ ? A LYS 294 NZ 123 1 Y 1 A LYS 538 ? CG ? A LYS 297 CG 124 1 Y 1 A LYS 538 ? CD ? A LYS 297 CD 125 1 Y 1 A LYS 538 ? CE ? A LYS 297 CE 126 1 Y 1 A LYS 538 ? NZ ? A LYS 297 NZ 127 1 Y 1 A ASN 540 ? CG ? A ASN 299 CG 128 1 Y 1 A ASN 540 ? OD1 ? A ASN 299 OD1 129 1 Y 1 A ASN 540 ? ND2 ? A ASN 299 ND2 130 1 Y 1 A LYS 541 ? CG ? A LYS 300 CG 131 1 Y 1 A LYS 541 ? CD ? A LYS 300 CD 132 1 Y 1 A LYS 541 ? CE ? A LYS 300 CE 133 1 Y 1 A LYS 541 ? NZ ? A LYS 300 NZ 134 1 Y 1 A GLN 543 ? CG ? A GLN 302 CG 135 1 Y 1 A GLN 543 ? CD ? A GLN 302 CD 136 1 Y 1 A GLN 543 ? OE1 ? A GLN 302 OE1 137 1 Y 1 A GLN 543 ? NE2 ? A GLN 302 NE2 138 1 Y 1 A LYS 546 ? CG ? A LYS 305 CG 139 1 Y 1 A LYS 546 ? CD ? A LYS 305 CD 140 1 Y 1 A LYS 546 ? CE ? A LYS 305 CE 141 1 Y 1 A LYS 546 ? NZ ? A LYS 305 NZ 142 1 Y 1 A LYS 571 ? CG ? A LYS 330 CG 143 1 Y 1 A LYS 571 ? CD ? A LYS 330 CD 144 1 Y 1 A LYS 571 ? CE ? A LYS 330 CE 145 1 Y 1 A LYS 571 ? NZ ? A LYS 330 NZ 146 1 Y 1 A GLU 583 ? CG ? A GLU 342 CG 147 1 Y 1 A GLU 583 ? CD ? A GLU 342 CD 148 1 Y 1 A GLU 583 ? OE1 ? A GLU 342 OE1 149 1 Y 1 A GLU 583 ? OE2 ? A GLU 342 OE2 150 1 Y 1 A ILE 584 ? CG1 ? A ILE 343 CG1 151 1 Y 1 A ILE 584 ? CG2 ? A ILE 343 CG2 152 1 Y 1 A ILE 584 ? CD1 ? A ILE 343 CD1 153 1 Y 1 A LYS 586 ? CG ? A LYS 345 CG 154 1 Y 1 A LYS 586 ? CD ? A LYS 345 CD 155 1 Y 1 A LYS 586 ? CE ? A LYS 345 CE 156 1 Y 1 A LYS 586 ? NZ ? A LYS 345 NZ 157 1 Y 1 A GLU 591 ? CG ? A GLU 350 CG 158 1 Y 1 A GLU 591 ? CD ? A GLU 350 CD 159 1 Y 1 A GLU 591 ? OE1 ? A GLU 350 OE1 160 1 Y 1 A GLU 591 ? OE2 ? A GLU 350 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A LEU 242 ? A LEU 1 2 1 Y 1 A MSE 243 ? A MSE 2 3 1 Y 1 A PHE 244 ? A PHE 3 4 1 Y 1 A ASN 245 ? A ASN 4 5 1 Y 1 A GLU 246 ? A GLU 5 6 1 Y 1 A VAL 247 ? A VAL 6 7 1 Y 1 A ASP 248 ? A ASP 7 8 1 Y 1 A ASP 249 ? A ASP 8 9 1 Y 1 A MSE 250 ? A MSE 9 10 1 Y 1 A LYS 251 ? A LYS 10 11 1 Y 1 A SER 252 ? A SER 11 12 1 Y 1 A HIS 253 ? A HIS 12 13 1 Y 1 A GLU 594 ? A GLU 353 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name 'CALCIUM ION' _pdbx_entity_nonpoly.comp_id CA #