data_4IN1 # _entry.id 4IN1 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.321 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4IN1 RCSB RCSB076957 WWPDB D_1000076957 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4IMQ . unspecified PDB 4IMZ . unspecified PDB 4IN2 . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4IN1 _pdbx_database_status.recvd_initial_deposition_date 2013-01-03 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Prasad, B.V.V.' 1 'Muhaxhiri, Z.' 2 'Deng, L.' 3 'Shanker, S.' 4 'Sankaran, B.' 5 'Estes, M.K.' 6 'Palzkill, T.' 7 'Song, Y.' 8 # _citation.id primary _citation.title 'Structural basis of substrate specificity and protease inhibition in norwalk virus.' _citation.journal_abbrev J.Virol. _citation.journal_volume 87 _citation.page_first 4281 _citation.page_last 4292 _citation.year 2013 _citation.journal_id_ASTM JOVIAM _citation.country US _citation.journal_id_ISSN 0022-538X _citation.journal_id_CSD 0825 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23365454 _citation.pdbx_database_id_DOI 10.1128/JVI.02869-12 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Muhaxhiri, Z.' 1 ? primary 'Deng, L.' 2 ? primary 'Shanker, S.' 3 ? primary 'Sankaran, B.' 4 ? primary 'Estes, M.K.' 5 ? primary 'Palzkill, T.' 6 ? primary 'Song, Y.' 7 ? primary 'Prasad, B.V.' 8 ? # _cell.entry_id 4IN1 _cell.length_a 124.197 _cell.length_b 124.197 _cell.length_c 49.680 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4IN1 _symmetry.space_group_name_H-M 'P 65 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man '3C-like protease' 19342.223 1 3.4.22.66 'I179T, N180A, F181L' 'norwalk virus protease (unp residues 1101-1281)' ? 2 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 3 water nat water 18.015 151 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Genome polyprotein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SAPPTLWSRVTKFGSGWGFWVSPTVFITTTHVVPTGVKEFFGEPLSSIAIHQAGEFTQFRFSKKMRPDLTGMVLEEGCPE GTVCSVLIKRDSGELLPLAVRMGAIASMRIQGRLVHGQSGMLLTGANAKGMDLGTIPGDCGAPYVHKRGNDWVVCGVHAA ATKSGNTVVCAVQAGEGEINFE ; _entity_poly.pdbx_seq_one_letter_code_can ;SAPPTLWSRVTKFGSGWGFWVSPTVFITTTHVVPTGVKEFFGEPLSSIAIHQAGEFTQFRFSKKMRPDLTGMVLEEGCPE GTVCSVLIKRDSGELLPLAVRMGAIASMRIQGRLVHGQSGMLLTGANAKGMDLGTIPGDCGAPYVHKRGNDWVVCGVHAA ATKSGNTVVCAVQAGEGEINFE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ALA n 1 3 PRO n 1 4 PRO n 1 5 THR n 1 6 LEU n 1 7 TRP n 1 8 SER n 1 9 ARG n 1 10 VAL n 1 11 THR n 1 12 LYS n 1 13 PHE n 1 14 GLY n 1 15 SER n 1 16 GLY n 1 17 TRP n 1 18 GLY n 1 19 PHE n 1 20 TRP n 1 21 VAL n 1 22 SER n 1 23 PRO n 1 24 THR n 1 25 VAL n 1 26 PHE n 1 27 ILE n 1 28 THR n 1 29 THR n 1 30 THR n 1 31 HIS n 1 32 VAL n 1 33 VAL n 1 34 PRO n 1 35 THR n 1 36 GLY n 1 37 VAL n 1 38 LYS n 1 39 GLU n 1 40 PHE n 1 41 PHE n 1 42 GLY n 1 43 GLU n 1 44 PRO n 1 45 LEU n 1 46 SER n 1 47 SER n 1 48 ILE n 1 49 ALA n 1 50 ILE n 1 51 HIS n 1 52 GLN n 1 53 ALA n 1 54 GLY n 1 55 GLU n 1 56 PHE n 1 57 THR n 1 58 GLN n 1 59 PHE n 1 60 ARG n 1 61 PHE n 1 62 SER n 1 63 LYS n 1 64 LYS n 1 65 MET n 1 66 ARG n 1 67 PRO n 1 68 ASP n 1 69 LEU n 1 70 THR n 1 71 GLY n 1 72 MET n 1 73 VAL n 1 74 LEU n 1 75 GLU n 1 76 GLU n 1 77 GLY n 1 78 CYS n 1 79 PRO n 1 80 GLU n 1 81 GLY n 1 82 THR n 1 83 VAL n 1 84 CYS n 1 85 SER n 1 86 VAL n 1 87 LEU n 1 88 ILE n 1 89 LYS n 1 90 ARG n 1 91 ASP n 1 92 SER n 1 93 GLY n 1 94 GLU n 1 95 LEU n 1 96 LEU n 1 97 PRO n 1 98 LEU n 1 99 ALA n 1 100 VAL n 1 101 ARG n 1 102 MET n 1 103 GLY n 1 104 ALA n 1 105 ILE n 1 106 ALA n 1 107 SER n 1 108 MET n 1 109 ARG n 1 110 ILE n 1 111 GLN n 1 112 GLY n 1 113 ARG n 1 114 LEU n 1 115 VAL n 1 116 HIS n 1 117 GLY n 1 118 GLN n 1 119 SER n 1 120 GLY n 1 121 MET n 1 122 LEU n 1 123 LEU n 1 124 THR n 1 125 GLY n 1 126 ALA n 1 127 ASN n 1 128 ALA n 1 129 LYS n 1 130 GLY n 1 131 MET n 1 132 ASP n 1 133 LEU n 1 134 GLY n 1 135 THR n 1 136 ILE n 1 137 PRO n 1 138 GLY n 1 139 ASP n 1 140 CYS n 1 141 GLY n 1 142 ALA n 1 143 PRO n 1 144 TYR n 1 145 VAL n 1 146 HIS n 1 147 LYS n 1 148 ARG n 1 149 GLY n 1 150 ASN n 1 151 ASP n 1 152 TRP n 1 153 VAL n 1 154 VAL n 1 155 CYS n 1 156 GLY n 1 157 VAL n 1 158 HIS n 1 159 ALA n 1 160 ALA n 1 161 ALA n 1 162 THR n 1 163 LYS n 1 164 SER n 1 165 GLY n 1 166 ASN n 1 167 THR n 1 168 VAL n 1 169 VAL n 1 170 CYS n 1 171 ALA n 1 172 VAL n 1 173 GLN n 1 174 ALA n 1 175 GLY n 1 176 GLU n 1 177 GLY n 1 178 GLU n 1 179 ILE n 1 180 ASN n 1 181 PHE n 1 182 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name Hu/NV/NV/1968/US _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ORF1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'GI/Human/United States/Norwalk/1968' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Norovirus Hu/1968/US' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 524364 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code POLG_NVN68 _struct_ref.pdbx_db_accession Q83883 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;APPTLWSRVTKFGSGWGFWVSPTVFITTTHVVPTGVKEFFGEPLSSIAIHQAGEFTQFRFSKKMRPDLTGMVLEEGCPEG TVCSVLIKRDSGELLPLAVRMGAIASMRIQGRLVHGQSGMLLTGANAKGMDLGTIPGDCGAPYVHKRGNDWVVCGVHAAA TKSGNTVVCAVQAGEGETALE ; _struct_ref.pdbx_align_begin 1101 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4IN1 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 182 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q83883 _struct_ref_seq.db_align_beg 1101 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 1281 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 181 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4IN1 SER A 1 ? UNP Q83883 ? ? 'expression tag' 0 1 1 4IN1 ILE A 179 ? UNP Q83883 THR 1278 'engineered mutation' 178 2 1 4IN1 ASN A 180 ? UNP Q83883 ALA 1279 'engineered mutation' 179 3 1 4IN1 PHE A 181 ? UNP Q83883 LEU 1280 'engineered mutation' 180 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4IN1 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.86 _exptl_crystal.density_percent_sol 56.98 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp 293.15 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.8 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '1.9 M lithium sulfate and 0.1 M sodium cacodylate, 25% glycerol, pH 6.8, VAPOR DIFFUSION, HANGING DROP, temperature 293.15K' # _diffrn.id 1 _diffrn.ambient_temp 77 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2011-03-12 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'ROSENBAUM-ROCK HIGH-RESOLUTION DOUBLE-CRYSTAL MONOCHROMATOR. LN2 COOLED FIRST CRYSTAL, SAGITTAL FOCUSING 2ND CRYSTAL' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97921 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_wavelength 0.97921 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4IN1 _reflns.observed_criterion_sigma_I 2.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 40.000 _reflns.d_resolution_high 2.050 _reflns.number_obs 14341 _reflns.number_all ? _reflns.percent_possible_obs 97.6 _reflns.pdbx_Rmerge_I_obs 0.105 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_CC_half ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_Rrim_I_all ? # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.05 _reflns_shell.d_res_low 2.09 _reflns_shell.percent_possible_all 5.3 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_Rrim_I_all ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4IN1 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 13848 _refine.ls_number_reflns_all 14341 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 35.85 _refine.ls_d_res_high 2.05 _refine.ls_percent_reflns_obs 94.4 _refine.ls_R_factor_obs 0.165 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.163 _refine.ls_R_factor_R_free 0.201 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.080 _refine.ls_number_reflns_R_free 704 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] -0.10220 _refine.aniso_B[2][2] -0.10220 _refine.aniso_B[3][3] 0.20450 _refine.aniso_B[1][2] -0.00000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.40 _refine.solvent_model_param_bsol 56.94 _refine.pdbx_solvent_vdw_probe_radii 1.00 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.72 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.150 _refine.pdbx_overall_phase_error 17.480 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1296 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 5 _refine_hist.number_atoms_solvent 151 _refine_hist.number_atoms_total 1452 _refine_hist.d_res_high 2.05 _refine_hist.d_res_low 35.85 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.006 ? ? 1359 'X-RAY DIFFRACTION' ? f_angle_d 1.015 ? ? 1854 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 12.773 ? ? 482 'X-RAY DIFFRACTION' ? f_chiral_restr 0.068 ? ? 210 'X-RAY DIFFRACTION' ? f_plane_restr 0.004 ? ? 239 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.number_reflns_obs _refine_ls_shell.R_factor_obs 'X-RAY DIFFRACTION' . 2.0500 2.2083 2430 0.1583 90.00 0.1960 . . 142 . . . . . 'X-RAY DIFFRACTION' . 2.2083 2.4305 2515 0.1645 92.00 0.2398 . . 139 . . . . . 'X-RAY DIFFRACTION' . 2.4305 2.7821 2588 0.1710 94.00 0.2152 . . 140 . . . . . 'X-RAY DIFFRACTION' . 2.7821 3.5046 2716 0.1531 97.00 0.1754 . . 128 . . . . . 'X-RAY DIFFRACTION' . 3.5046 35.8581 2895 0.1672 98.00 0.2008 . . 155 . . . . . # _struct.entry_id 4IN1 _struct.title 'Structural Basis of Substrate Specificity and Protease Inhibition in Norwalk Virus' _struct.pdbx_descriptor 'Genome polyprotein (E.C.3.6.1.15, 3.4.22.66, 2.7.7.48)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4IN1 _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'Protease, Hydrolase' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 3 ? ARG A 9 ? PRO A 2 ARG A 8 1 ? 7 HELX_P HELX_P2 2 HIS A 31 ? VAL A 33 ? HIS A 30 VAL A 32 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id disulf1 _struct_conn.conn_type_id disulf _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 78 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 155 _struct_conn.ptnr2_label_atom_id SG _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 77 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 154 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 2.062 _struct_conn.pdbx_value_order ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 2 ? C ? 8 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel C 5 6 ? anti-parallel C 6 7 ? anti-parallel C 7 8 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 10 ? PHE A 13 ? VAL A 9 PHE A 12 A 2 GLY A 16 ? TRP A 20 ? GLY A 15 TRP A 19 A 3 VAL A 25 ? THR A 29 ? VAL A 24 THR A 28 A 4 PHE A 56 ? PHE A 61 ? PHE A 55 PHE A 60 A 5 ILE A 48 ? ALA A 53 ? ILE A 47 ALA A 52 B 1 GLU A 39 ? PHE A 40 ? GLU A 38 PHE A 39 B 2 GLU A 43 ? PRO A 44 ? GLU A 42 PRO A 43 C 1 VAL A 73 ? LEU A 74 ? VAL A 72 LEU A 73 C 2 ASP A 151 ? ALA A 161 ? ASP A 150 ALA A 160 C 3 THR A 167 ? ALA A 171 ? THR A 166 ALA A 170 C 4 ARG A 113 ? LEU A 122 ? ARG A 112 LEU A 121 C 5 LEU A 95 ? ILE A 110 ? LEU A 94 ILE A 109 C 6 VAL A 83 ? LYS A 89 ? VAL A 82 LYS A 88 C 7 PRO A 143 ? ARG A 148 ? PRO A 142 ARG A 147 C 8 ASP A 151 ? ALA A 161 ? ASP A 150 ALA A 160 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N THR A 11 ? N THR A 10 O GLY A 18 ? O GLY A 17 A 2 3 N PHE A 19 ? N PHE A 18 O ILE A 27 ? O ILE A 26 A 3 4 N PHE A 26 ? N PHE A 25 O PHE A 59 ? O PHE A 58 A 4 5 O GLN A 58 ? O GLN A 57 N HIS A 51 ? N HIS A 50 B 1 2 N PHE A 40 ? N PHE A 39 O GLU A 43 ? O GLU A 42 C 1 2 N VAL A 73 ? N VAL A 72 O VAL A 154 ? O VAL A 153 C 2 3 N VAL A 157 ? N VAL A 156 O ALA A 171 ? O ALA A 170 C 3 4 O CYS A 170 ? O CYS A 169 N GLN A 118 ? N GLN A 117 C 4 5 O ARG A 113 ? O ARG A 112 N ILE A 110 ? N ILE A 109 C 5 6 O LEU A 96 ? O LEU A 95 N ILE A 88 ? N ILE A 87 C 6 7 N SER A 85 ? N SER A 84 O VAL A 145 ? O VAL A 144 C 7 8 N ARG A 148 ? N ARG A 147 O ASP A 151 ? O ASP A 150 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 5 _struct_site.details 'BINDING SITE FOR RESIDUE SO4 A 201' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 THR A 162 ? THR A 161 . ? 1_555 ? 2 AC1 5 SER A 164 ? SER A 163 . ? 1_555 ? 3 AC1 5 ASN A 166 ? ASN A 165 . ? 1_555 ? 4 AC1 5 THR A 167 ? THR A 166 . ? 1_555 ? 5 AC1 5 HOH C . ? HOH A 440 . ? 1_555 ? # _database_PDB_matrix.entry_id 4IN1 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4IN1 _atom_sites.fract_transf_matrix[1][1] 0.008052 _atom_sites.fract_transf_matrix[1][2] 0.004649 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009297 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.020129 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 0 0 SER SER A . n A 1 2 ALA 2 1 1 ALA ALA A . n A 1 3 PRO 3 2 2 PRO PRO A . n A 1 4 PRO 4 3 3 PRO PRO A . n A 1 5 THR 5 4 4 THR THR A . n A 1 6 LEU 6 5 5 LEU LEU A . n A 1 7 TRP 7 6 6 TRP TRP A . n A 1 8 SER 8 7 7 SER SER A . n A 1 9 ARG 9 8 8 ARG ARG A . n A 1 10 VAL 10 9 9 VAL VAL A . n A 1 11 THR 11 10 10 THR THR A . n A 1 12 LYS 12 11 11 LYS LYS A . n A 1 13 PHE 13 12 12 PHE PHE A . n A 1 14 GLY 14 13 13 GLY GLY A . n A 1 15 SER 15 14 14 SER SER A . n A 1 16 GLY 16 15 15 GLY GLY A . n A 1 17 TRP 17 16 16 TRP TRP A . n A 1 18 GLY 18 17 17 GLY GLY A . n A 1 19 PHE 19 18 18 PHE PHE A . n A 1 20 TRP 20 19 19 TRP TRP A . n A 1 21 VAL 21 20 20 VAL VAL A . n A 1 22 SER 22 21 21 SER SER A . n A 1 23 PRO 23 22 22 PRO PRO A . n A 1 24 THR 24 23 23 THR THR A . n A 1 25 VAL 25 24 24 VAL VAL A . n A 1 26 PHE 26 25 25 PHE PHE A . n A 1 27 ILE 27 26 26 ILE ILE A . n A 1 28 THR 28 27 27 THR THR A . n A 1 29 THR 29 28 28 THR THR A . n A 1 30 THR 30 29 29 THR THR A . n A 1 31 HIS 31 30 30 HIS HIS A . n A 1 32 VAL 32 31 31 VAL VAL A . n A 1 33 VAL 33 32 32 VAL VAL A . n A 1 34 PRO 34 33 33 PRO PRO A . n A 1 35 THR 35 34 34 THR THR A . n A 1 36 GLY 36 35 35 GLY GLY A . n A 1 37 VAL 37 36 36 VAL VAL A . n A 1 38 LYS 38 37 37 LYS LYS A . n A 1 39 GLU 39 38 38 GLU GLU A . n A 1 40 PHE 40 39 39 PHE PHE A . n A 1 41 PHE 41 40 40 PHE PHE A . n A 1 42 GLY 42 41 41 GLY GLY A . n A 1 43 GLU 43 42 42 GLU GLU A . n A 1 44 PRO 44 43 43 PRO PRO A . n A 1 45 LEU 45 44 44 LEU LEU A . n A 1 46 SER 46 45 45 SER SER A . n A 1 47 SER 47 46 46 SER SER A . n A 1 48 ILE 48 47 47 ILE ILE A . n A 1 49 ALA 49 48 48 ALA ALA A . n A 1 50 ILE 50 49 49 ILE ILE A . n A 1 51 HIS 51 50 50 HIS HIS A . n A 1 52 GLN 52 51 51 GLN GLN A . n A 1 53 ALA 53 52 52 ALA ALA A . n A 1 54 GLY 54 53 53 GLY GLY A . n A 1 55 GLU 55 54 54 GLU GLU A . n A 1 56 PHE 56 55 55 PHE PHE A . n A 1 57 THR 57 56 56 THR THR A . n A 1 58 GLN 58 57 57 GLN GLN A . n A 1 59 PHE 59 58 58 PHE PHE A . n A 1 60 ARG 60 59 59 ARG ARG A . n A 1 61 PHE 61 60 60 PHE PHE A . n A 1 62 SER 62 61 61 SER SER A . n A 1 63 LYS 63 62 62 LYS LYS A . n A 1 64 LYS 64 63 63 LYS LYS A . n A 1 65 MET 65 64 64 MET MET A . n A 1 66 ARG 66 65 65 ARG ARG A . n A 1 67 PRO 67 66 66 PRO PRO A . n A 1 68 ASP 68 67 67 ASP ASP A . n A 1 69 LEU 69 68 68 LEU LEU A . n A 1 70 THR 70 69 69 THR THR A . n A 1 71 GLY 71 70 70 GLY GLY A . n A 1 72 MET 72 71 71 MET MET A . n A 1 73 VAL 73 72 72 VAL VAL A . n A 1 74 LEU 74 73 73 LEU LEU A . n A 1 75 GLU 75 74 74 GLU GLU A . n A 1 76 GLU 76 75 75 GLU GLU A . n A 1 77 GLY 77 76 76 GLY GLY A . n A 1 78 CYS 78 77 77 CYS CYS A . n A 1 79 PRO 79 78 78 PRO PRO A . n A 1 80 GLU 80 79 79 GLU GLU A . n A 1 81 GLY 81 80 80 GLY GLY A . n A 1 82 THR 82 81 81 THR THR A . n A 1 83 VAL 83 82 82 VAL VAL A . n A 1 84 CYS 84 83 83 CYS CYS A . n A 1 85 SER 85 84 84 SER SER A . n A 1 86 VAL 86 85 85 VAL VAL A . n A 1 87 LEU 87 86 86 LEU LEU A . n A 1 88 ILE 88 87 87 ILE ILE A . n A 1 89 LYS 89 88 88 LYS LYS A . n A 1 90 ARG 90 89 89 ARG ARG A . n A 1 91 ASP 91 90 90 ASP ASP A . n A 1 92 SER 92 91 91 SER SER A . n A 1 93 GLY 93 92 92 GLY GLY A . n A 1 94 GLU 94 93 93 GLU GLU A . n A 1 95 LEU 95 94 94 LEU LEU A . n A 1 96 LEU 96 95 95 LEU LEU A . n A 1 97 PRO 97 96 96 PRO PRO A . n A 1 98 LEU 98 97 97 LEU LEU A . n A 1 99 ALA 99 98 98 ALA ALA A . n A 1 100 VAL 100 99 99 VAL VAL A . n A 1 101 ARG 101 100 100 ARG ARG A . n A 1 102 MET 102 101 101 MET MET A . n A 1 103 GLY 103 102 102 GLY GLY A . n A 1 104 ALA 104 103 103 ALA ALA A . n A 1 105 ILE 105 104 104 ILE ILE A . n A 1 106 ALA 106 105 105 ALA ALA A . n A 1 107 SER 107 106 106 SER SER A . n A 1 108 MET 108 107 107 MET MET A . n A 1 109 ARG 109 108 108 ARG ARG A . n A 1 110 ILE 110 109 109 ILE ILE A . n A 1 111 GLN 111 110 110 GLN GLN A . n A 1 112 GLY 112 111 111 GLY GLY A . n A 1 113 ARG 113 112 112 ARG ARG A . n A 1 114 LEU 114 113 113 LEU LEU A . n A 1 115 VAL 115 114 114 VAL VAL A . n A 1 116 HIS 116 115 115 HIS HIS A . n A 1 117 GLY 117 116 116 GLY GLY A . n A 1 118 GLN 118 117 117 GLN GLN A . n A 1 119 SER 119 118 118 SER SER A . n A 1 120 GLY 120 119 119 GLY GLY A . n A 1 121 MET 121 120 120 MET MET A . n A 1 122 LEU 122 121 121 LEU LEU A . n A 1 123 LEU 123 122 122 LEU LEU A . n A 1 124 THR 124 123 123 THR THR A . n A 1 125 GLY 125 124 ? ? ? A . n A 1 126 ALA 126 125 ? ? ? A . n A 1 127 ASN 127 126 ? ? ? A . n A 1 128 ALA 128 127 ? ? ? A . n A 1 129 LYS 129 128 ? ? ? A . n A 1 130 GLY 130 129 ? ? ? A . n A 1 131 MET 131 130 ? ? ? A . n A 1 132 ASP 132 131 ? ? ? A . n A 1 133 LEU 133 132 132 LEU ALA A . n A 1 134 GLY 134 133 133 GLY GLY A . n A 1 135 THR 135 134 134 THR THR A . n A 1 136 ILE 136 135 135 ILE ILE A . n A 1 137 PRO 137 136 136 PRO PRO A . n A 1 138 GLY 138 137 137 GLY GLY A . n A 1 139 ASP 139 138 138 ASP ASP A . n A 1 140 CYS 140 139 139 CYS ALA A . n A 1 141 GLY 141 140 140 GLY GLY A . n A 1 142 ALA 142 141 141 ALA ALA A . n A 1 143 PRO 143 142 142 PRO PRO A . n A 1 144 TYR 144 143 143 TYR TYR A . n A 1 145 VAL 145 144 144 VAL VAL A . n A 1 146 HIS 146 145 145 HIS HIS A . n A 1 147 LYS 147 146 146 LYS LYS A . n A 1 148 ARG 148 147 147 ARG ARG A . n A 1 149 GLY 149 148 148 GLY GLY A . n A 1 150 ASN 150 149 149 ASN ASN A . n A 1 151 ASP 151 150 150 ASP ASP A . n A 1 152 TRP 152 151 151 TRP TRP A . n A 1 153 VAL 153 152 152 VAL VAL A . n A 1 154 VAL 154 153 153 VAL VAL A . n A 1 155 CYS 155 154 154 CYS CYS A . n A 1 156 GLY 156 155 155 GLY GLY A . n A 1 157 VAL 157 156 156 VAL VAL A . n A 1 158 HIS 158 157 157 HIS HIS A . n A 1 159 ALA 159 158 158 ALA ALA A . n A 1 160 ALA 160 159 159 ALA ALA A . n A 1 161 ALA 161 160 160 ALA ALA A . n A 1 162 THR 162 161 161 THR THR A . n A 1 163 LYS 163 162 162 LYS LYS A . n A 1 164 SER 164 163 163 SER SER A . n A 1 165 GLY 165 164 164 GLY GLY A . n A 1 166 ASN 166 165 165 ASN ASN A . n A 1 167 THR 167 166 166 THR THR A . n A 1 168 VAL 168 167 167 VAL VAL A . n A 1 169 VAL 169 168 168 VAL VAL A . n A 1 170 CYS 170 169 169 CYS CYS A . n A 1 171 ALA 171 170 170 ALA ALA A . n A 1 172 VAL 172 171 171 VAL VAL A . n A 1 173 GLN 173 172 172 GLN GLN A . n A 1 174 ALA 174 173 173 ALA ALA A . n A 1 175 GLY 175 174 174 GLY GLY A . n A 1 176 GLU 176 175 175 GLU GLU A . n A 1 177 GLY 177 176 176 GLY GLY A . n A 1 178 GLU 178 177 177 GLU GLU A . n A 1 179 ILE 179 178 178 ILE ILE A . n A 1 180 ASN 180 179 179 ASN ASN A . n A 1 181 PHE 181 180 180 PHE PHE A . n A 1 182 GLU 182 181 181 GLU GLU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 1 201 1 SO4 SO4 A . C 3 HOH 1 301 1 HOH HOH A . C 3 HOH 2 302 2 HOH HOH A . C 3 HOH 3 303 3 HOH HOH A . C 3 HOH 4 304 4 HOH HOH A . C 3 HOH 5 305 5 HOH HOH A . C 3 HOH 6 306 6 HOH HOH A . C 3 HOH 7 307 7 HOH HOH A . C 3 HOH 8 308 8 HOH HOH A . C 3 HOH 9 309 9 HOH HOH A . C 3 HOH 10 310 10 HOH HOH A . C 3 HOH 11 311 11 HOH HOH A . C 3 HOH 12 312 12 HOH HOH A . C 3 HOH 13 313 14 HOH HOH A . C 3 HOH 14 314 15 HOH HOH A . C 3 HOH 15 315 16 HOH HOH A . C 3 HOH 16 316 17 HOH HOH A . C 3 HOH 17 317 18 HOH HOH A . C 3 HOH 18 318 19 HOH HOH A . C 3 HOH 19 319 20 HOH HOH A . C 3 HOH 20 320 21 HOH HOH A . C 3 HOH 21 321 22 HOH HOH A . C 3 HOH 22 322 23 HOH HOH A . C 3 HOH 23 323 24 HOH HOH A . C 3 HOH 24 324 25 HOH HOH A . C 3 HOH 25 325 26 HOH HOH A . C 3 HOH 26 326 27 HOH HOH A . C 3 HOH 27 327 28 HOH HOH A . C 3 HOH 28 328 29 HOH HOH A . C 3 HOH 29 329 30 HOH HOH A . C 3 HOH 30 330 31 HOH HOH A . C 3 HOH 31 331 32 HOH HOH A . C 3 HOH 32 332 33 HOH HOH A . C 3 HOH 33 333 34 HOH HOH A . C 3 HOH 34 334 35 HOH HOH A . C 3 HOH 35 335 36 HOH HOH A . C 3 HOH 36 336 37 HOH HOH A . C 3 HOH 37 337 38 HOH HOH A . C 3 HOH 38 338 39 HOH HOH A . C 3 HOH 39 339 40 HOH HOH A . C 3 HOH 40 340 41 HOH HOH A . C 3 HOH 41 341 42 HOH HOH A . C 3 HOH 42 342 43 HOH HOH A . C 3 HOH 43 343 44 HOH HOH A . C 3 HOH 44 344 45 HOH HOH A . C 3 HOH 45 345 46 HOH HOH A . C 3 HOH 46 346 47 HOH HOH A . C 3 HOH 47 347 48 HOH HOH A . C 3 HOH 48 348 49 HOH HOH A . C 3 HOH 49 349 50 HOH HOH A . C 3 HOH 50 350 51 HOH HOH A . C 3 HOH 51 351 52 HOH HOH A . C 3 HOH 52 352 53 HOH HOH A . C 3 HOH 53 353 54 HOH HOH A . C 3 HOH 54 354 55 HOH HOH A . C 3 HOH 55 355 56 HOH HOH A . C 3 HOH 56 356 57 HOH HOH A . C 3 HOH 57 357 58 HOH HOH A . C 3 HOH 58 358 59 HOH HOH A . C 3 HOH 59 359 60 HOH HOH A . C 3 HOH 60 360 61 HOH HOH A . C 3 HOH 61 361 62 HOH HOH A . C 3 HOH 62 362 63 HOH HOH A . C 3 HOH 63 363 64 HOH HOH A . C 3 HOH 64 364 65 HOH HOH A . C 3 HOH 65 365 66 HOH HOH A . C 3 HOH 66 366 67 HOH HOH A . C 3 HOH 67 367 68 HOH HOH A . C 3 HOH 68 368 69 HOH HOH A . C 3 HOH 69 369 70 HOH HOH A . C 3 HOH 70 370 71 HOH HOH A . C 3 HOH 71 371 72 HOH HOH A . C 3 HOH 72 372 73 HOH HOH A . C 3 HOH 73 373 74 HOH HOH A . C 3 HOH 74 374 75 HOH HOH A . C 3 HOH 75 375 76 HOH HOH A . C 3 HOH 76 376 77 HOH HOH A . C 3 HOH 77 377 78 HOH HOH A . C 3 HOH 78 378 79 HOH HOH A . C 3 HOH 79 379 80 HOH HOH A . C 3 HOH 80 380 81 HOH HOH A . C 3 HOH 81 381 82 HOH HOH A . C 3 HOH 82 382 83 HOH HOH A . C 3 HOH 83 383 84 HOH HOH A . C 3 HOH 84 384 85 HOH HOH A . C 3 HOH 85 385 86 HOH HOH A . C 3 HOH 86 386 87 HOH HOH A . C 3 HOH 87 387 88 HOH HOH A . C 3 HOH 88 388 89 HOH HOH A . C 3 HOH 89 389 90 HOH HOH A . C 3 HOH 90 390 91 HOH HOH A . C 3 HOH 91 391 92 HOH HOH A . C 3 HOH 92 392 93 HOH HOH A . C 3 HOH 93 393 94 HOH HOH A . C 3 HOH 94 394 95 HOH HOH A . C 3 HOH 95 395 96 HOH HOH A . C 3 HOH 96 396 97 HOH HOH A . C 3 HOH 97 397 98 HOH HOH A . C 3 HOH 98 398 99 HOH HOH A . C 3 HOH 99 399 100 HOH HOH A . C 3 HOH 100 400 101 HOH HOH A . C 3 HOH 101 401 102 HOH HOH A . C 3 HOH 102 402 103 HOH HOH A . C 3 HOH 103 403 104 HOH HOH A . C 3 HOH 104 404 105 HOH HOH A . C 3 HOH 105 405 106 HOH HOH A . C 3 HOH 106 406 107 HOH HOH A . C 3 HOH 107 407 108 HOH HOH A . C 3 HOH 108 408 109 HOH HOH A . C 3 HOH 109 409 110 HOH HOH A . C 3 HOH 110 410 111 HOH HOH A . C 3 HOH 111 411 112 HOH HOH A . C 3 HOH 112 412 113 HOH HOH A . C 3 HOH 113 413 114 HOH HOH A . C 3 HOH 114 414 115 HOH HOH A . C 3 HOH 115 415 116 HOH HOH A . C 3 HOH 116 416 117 HOH HOH A . C 3 HOH 117 417 118 HOH HOH A . C 3 HOH 118 418 119 HOH HOH A . C 3 HOH 119 419 120 HOH HOH A . C 3 HOH 120 420 121 HOH HOH A . C 3 HOH 121 421 122 HOH HOH A . C 3 HOH 122 422 123 HOH HOH A . C 3 HOH 123 423 124 HOH HOH A . C 3 HOH 124 424 126 HOH HOH A . C 3 HOH 125 425 127 HOH HOH A . C 3 HOH 126 426 128 HOH HOH A . C 3 HOH 127 427 129 HOH HOH A . C 3 HOH 128 428 130 HOH HOH A . C 3 HOH 129 429 131 HOH HOH A . C 3 HOH 130 430 132 HOH HOH A . C 3 HOH 131 431 133 HOH HOH A . C 3 HOH 132 432 134 HOH HOH A . C 3 HOH 133 433 135 HOH HOH A . C 3 HOH 134 434 136 HOH HOH A . C 3 HOH 135 435 137 HOH HOH A . C 3 HOH 136 436 138 HOH HOH A . C 3 HOH 137 437 139 HOH HOH A . C 3 HOH 138 438 140 HOH HOH A . C 3 HOH 139 439 141 HOH HOH A . C 3 HOH 140 440 142 HOH HOH A . C 3 HOH 141 441 143 HOH HOH A . C 3 HOH 142 442 144 HOH HOH A . C 3 HOH 143 443 145 HOH HOH A . C 3 HOH 144 444 146 HOH HOH A . C 3 HOH 145 445 147 HOH HOH A . C 3 HOH 146 446 148 HOH HOH A . C 3 HOH 147 447 149 HOH HOH A . C 3 HOH 148 448 150 HOH HOH A . C 3 HOH 149 449 151 HOH HOH A . C 3 HOH 150 450 152 HOH HOH A . C 3 HOH 151 451 154 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4000 ? 1 MORE -76 ? 1 'SSA (A^2)' 14850 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 7_555 y,x,-z+2/3 -0.5000000000 0.8660254038 0.0000000000 0.0000000000 0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 33.1200000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-02-20 2 'Structure model' 1 1 2013-04-10 3 'Structure model' 1 2 2020-01-29 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' reflns 2 3 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_reflns.pdbx_Rmerge_I_obs' 2 3 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 34.5419 31.6028 -3.4764 0.1446 0.1754 0.1388 0.0330 -0.0023 -0.0377 0.4486 0.3412 0.6756 -0.3664 -0.2847 0.0796 0.0182 0.0819 -0.0710 -0.0088 0.0269 0.0111 -0.0958 0.1357 -0.0350 'X-RAY DIFFRACTION' 2 ? refined 45.7003 41.0430 -8.5500 0.1768 0.2932 0.2679 -0.0544 0.0947 -0.0936 0.6500 0.1883 0.0777 0.2201 -0.1239 -0.1207 0.2678 -0.2133 0.0488 -0.0297 0.0393 -0.2233 -0.4443 0.4463 0.0781 'X-RAY DIFFRACTION' 3 ? refined 35.5186 44.4337 -6.1751 0.2204 0.2020 0.1627 0.0079 0.0550 -0.0273 0.5918 0.2605 0.3893 -0.0862 -0.4788 0.0967 0.2290 0.1813 0.1837 -0.0767 -0.0081 -0.0480 -0.4717 -0.0630 -0.1403 'X-RAY DIFFRACTION' 4 ? refined 32.7310 32.3454 -15.4317 0.1869 0.2033 0.1411 0.0398 0.0130 -0.0403 0.9129 0.5604 0.4083 -0.3549 0.0314 -0.0049 -0.0090 0.3307 -0.3149 -0.1108 -0.0959 0.0528 0.1600 0.0742 -0.0208 'X-RAY DIFFRACTION' 5 ? refined 27.9908 30.2293 3.9259 0.1832 0.1609 0.1767 0.0209 -0.0061 -0.0183 0.3489 0.4859 0.2373 -0.1970 -0.0192 0.2204 -0.0607 0.0173 0.1017 0.1192 -0.0110 -0.0793 0.1221 -0.0863 0.0492 'X-RAY DIFFRACTION' 6 ? refined 29.2953 35.6947 12.6733 0.1376 0.0989 0.1489 0.0663 0.0691 -0.0378 0.2370 0.3043 0.1568 -0.2562 -0.1649 0.1368 -0.1428 -0.1074 -0.0511 0.2118 0.0639 -0.0253 0.0811 0.0388 -0.2048 'X-RAY DIFFRACTION' 7 ? refined 29.4645 40.5277 13.2546 0.1736 0.2015 0.1548 0.0247 0.0441 -0.0154 0.4838 0.6483 0.3366 0.0990 0.3824 0.2204 -0.1659 -0.1120 0.1017 0.0505 0.0916 0.0422 0.0130 0.2738 -0.0495 'X-RAY DIFFRACTION' 8 ? refined 35.4467 28.6222 10.7425 0.1873 0.2328 0.1826 0.1017 0.0298 -0.0001 0.1869 0.2820 0.1179 0.0539 -0.0543 0.0191 -0.1578 0.0072 -0.0284 0.1185 0.2229 -0.0226 0.1799 0.1093 -0.0238 'X-RAY DIFFRACTION' 9 ? refined 26.8737 31.8620 6.7523 0.1217 0.1607 0.1690 0.0184 0.0108 0.0051 0.7273 0.8522 0.8368 0.0601 -0.0987 -0.0460 -0.0626 -0.0507 -0.2427 0.1443 0.1075 0.1510 0.0979 -0.1860 0.0170 'X-RAY DIFFRACTION' 10 ? refined 18.3538 49.7179 11.7522 0.2416 0.3316 0.2179 0.0953 0.0173 0.0246 0.1301 0.1138 0.1292 -0.0023 -0.1135 0.0654 -0.0366 0.0503 -0.1145 0.1707 -0.0106 0.0688 -0.1279 -0.3319 -0.0290 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resseq 0:31) ; 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resseq 32:43) ; 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resseq 44:60) ; 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resseq 61:70) ; 'X-RAY DIFFRACTION' 5 5 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resseq 71:93) ; 'X-RAY DIFFRACTION' 6 6 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resseq 94:111) ; 'X-RAY DIFFRACTION' 7 7 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resseq 112:121) ; 'X-RAY DIFFRACTION' 8 8 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resseq 122:141) ; 'X-RAY DIFFRACTION' 9 9 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resseq 142:170) ; 'X-RAY DIFFRACTION' 10 10 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resseq 171:181) ; # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-3000 'data collection' . ? 1 PHASER phasing . ? 2 PHENIX refinement '(phenix.refine: 1.7_650)' ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LEU 132 ? CG ? A LEU 133 CG 2 1 Y 1 A LEU 132 ? CD1 ? A LEU 133 CD1 3 1 Y 1 A LEU 132 ? CD2 ? A LEU 133 CD2 4 1 Y 1 A CYS 139 ? SG ? A CYS 140 SG 5 1 Y 1 A LYS 162 ? CG ? A LYS 163 CG 6 1 Y 1 A LYS 162 ? CD ? A LYS 163 CD 7 1 Y 1 A LYS 162 ? CE ? A LYS 163 CE 8 1 Y 1 A LYS 162 ? NZ ? A LYS 163 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 124 ? A GLY 125 2 1 Y 1 A ALA 125 ? A ALA 126 3 1 Y 1 A ASN 126 ? A ASN 127 4 1 Y 1 A ALA 127 ? A ALA 128 5 1 Y 1 A LYS 128 ? A LYS 129 6 1 Y 1 A GLY 129 ? A GLY 130 7 1 Y 1 A MET 130 ? A MET 131 8 1 Y 1 A ASP 131 ? A ASP 132 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 water HOH #