data_4J39 # _entry.id 4J39 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4J39 pdb_00004j39 10.2210/pdb4j39/pdb NDB NA2233 ? ? RCSB RCSB077540 ? ? WWPDB D_1000077540 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-02-05 2 'Structure model' 1 1 2018-01-24 3 'Structure model' 1 2 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation_author 2 3 'Structure model' chem_comp_atom 3 3 'Structure model' chem_comp_bond 4 3 'Structure model' database_2 5 3 'Structure model' struct_ref_seq_dif 6 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation_author.name' 2 3 'Structure model' '_database_2.pdbx_DOI' 3 3 'Structure model' '_database_2.pdbx_database_accession' 4 3 'Structure model' '_struct_ref_seq_dif.details' 5 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.entry_id 4J39 _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2013-02-05 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4E5C 'siRNA comprising CUG/CGG repeats' unspecified PDB 4E6B . unspecified PDB 4E48 'siRNA comprising CUG/CUG repeats' unspecified PDB 1R9F 'Complex of p19 with 19mer RNA' unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tamjar, J.' 1 'Popov, A.N.' 2 'Malinina, L.' 3 # _citation.id primary _citation.title 'Procrustean bed of RNA silencing suppression' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Katorcha, E.' 1 ? primary 'Tamjar, J.' 2 ? primary 'Popov, A.N.' 3 ? primary 'Malinina, L.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'RNA silencing suppressor p19' 14513.208 1 ? ? 'UNP residues 27-149' ? 2 polymer syn "5'-R(P*CP*AP*GP*CP*AP*GP*CP*AP*GP*CP*CP*UP*GP*CP*UP*GP*CP*UP*G)-3'" 6068.665 1 ? ? ? 'siRNA p(CAG)3C(CUG)3' 3 non-polymer syn 'SULFATE ION' 96.063 4 ? ? ? ? 4 water nat water 18.015 151 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name '19 kDa symptom severity modulator' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GSHMTSPFKLPDESPSWTEWRLHNDETNSNQDNPLGFKESWGFGKVVFKRYLRYDRTEASLHRVLGSWTGDSVNYAASRF FGFDQIGCTYSIRFRGVSITVSGGSRTLQHLCEMAIRSKQELLQLAP ; ;GSHMTSPFKLPDESPSWTEWRLHNDETNSNQDNPLGFKESWGFGKVVFKRYLRYDRTEASLHRVLGSWTGDSVNYAASRF FGFDQIGCTYSIRFRGVSITVSGGSRTLQHLCEMAIRSKQELLQLAP ; A ? 2 polyribonucleotide no no CAGCAGCAGCCUGCUGCUG CAGCAGCAGCCUGCUGCUG B ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'SULFATE ION' SO4 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 THR n 1 6 SER n 1 7 PRO n 1 8 PHE n 1 9 LYS n 1 10 LEU n 1 11 PRO n 1 12 ASP n 1 13 GLU n 1 14 SER n 1 15 PRO n 1 16 SER n 1 17 TRP n 1 18 THR n 1 19 GLU n 1 20 TRP n 1 21 ARG n 1 22 LEU n 1 23 HIS n 1 24 ASN n 1 25 ASP n 1 26 GLU n 1 27 THR n 1 28 ASN n 1 29 SER n 1 30 ASN n 1 31 GLN n 1 32 ASP n 1 33 ASN n 1 34 PRO n 1 35 LEU n 1 36 GLY n 1 37 PHE n 1 38 LYS n 1 39 GLU n 1 40 SER n 1 41 TRP n 1 42 GLY n 1 43 PHE n 1 44 GLY n 1 45 LYS n 1 46 VAL n 1 47 VAL n 1 48 PHE n 1 49 LYS n 1 50 ARG n 1 51 TYR n 1 52 LEU n 1 53 ARG n 1 54 TYR n 1 55 ASP n 1 56 ARG n 1 57 THR n 1 58 GLU n 1 59 ALA n 1 60 SER n 1 61 LEU n 1 62 HIS n 1 63 ARG n 1 64 VAL n 1 65 LEU n 1 66 GLY n 1 67 SER n 1 68 TRP n 1 69 THR n 1 70 GLY n 1 71 ASP n 1 72 SER n 1 73 VAL n 1 74 ASN n 1 75 TYR n 1 76 ALA n 1 77 ALA n 1 78 SER n 1 79 ARG n 1 80 PHE n 1 81 PHE n 1 82 GLY n 1 83 PHE n 1 84 ASP n 1 85 GLN n 1 86 ILE n 1 87 GLY n 1 88 CYS n 1 89 THR n 1 90 TYR n 1 91 SER n 1 92 ILE n 1 93 ARG n 1 94 PHE n 1 95 ARG n 1 96 GLY n 1 97 VAL n 1 98 SER n 1 99 ILE n 1 100 THR n 1 101 VAL n 1 102 SER n 1 103 GLY n 1 104 GLY n 1 105 SER n 1 106 ARG n 1 107 THR n 1 108 LEU n 1 109 GLN n 1 110 HIS n 1 111 LEU n 1 112 CYS n 1 113 GLU n 1 114 MET n 1 115 ALA n 1 116 ILE n 1 117 ARG n 1 118 SER n 1 119 LYS n 1 120 GLN n 1 121 GLU n 1 122 LEU n 1 123 LEU n 1 124 GLN n 1 125 LEU n 1 126 ALA n 1 127 PRO n 2 1 C n 2 2 A n 2 3 G n 2 4 C n 2 5 A n 2 6 G n 2 7 C n 2 8 A n 2 9 G n 2 10 C n 2 11 C n 2 12 U n 2 13 G n 2 14 C n 2 15 U n 2 16 G n 2 17 C n 2 18 U n 2 19 G n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name TBSV _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ORF4 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Tomato bushy stunt virus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 12145 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 ? ? ? A . n A 1 2 SER 2 2 ? ? ? A . n A 1 3 HIS 3 3 ? ? ? A . n A 1 4 MET 4 4 4 MET MET A . n A 1 5 THR 5 5 5 THR THR A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 PRO 7 7 7 PRO PRO A . n A 1 8 PHE 8 8 8 PHE PHE A . n A 1 9 LYS 9 9 9 LYS LYS A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 PRO 11 11 11 PRO PRO A . n A 1 12 ASP 12 12 12 ASP ASP A . n A 1 13 GLU 13 13 13 GLU GLU A . n A 1 14 SER 14 14 14 SER SER A . n A 1 15 PRO 15 15 15 PRO PRO A . n A 1 16 SER 16 16 16 SER SER A . n A 1 17 TRP 17 17 17 TRP TRP A . n A 1 18 THR 18 18 18 THR THR A . n A 1 19 GLU 19 19 19 GLU GLU A . n A 1 20 TRP 20 20 20 TRP TRP A . n A 1 21 ARG 21 21 21 ARG ARG A . n A 1 22 LEU 22 22 22 LEU LEU A . n A 1 23 HIS 23 23 23 HIS HIS A . n A 1 24 ASN 24 24 24 ASN ASN A . n A 1 25 ASP 25 25 25 ASP ASP A . n A 1 26 GLU 26 26 26 GLU GLU A . n A 1 27 THR 27 27 27 THR THR A . n A 1 28 ASN 28 28 ? ? ? A . n A 1 29 SER 29 29 ? ? ? A . n A 1 30 ASN 30 30 30 ASN ASN A . n A 1 31 GLN 31 31 31 GLN GLN A . n A 1 32 ASP 32 32 32 ASP ASP A . n A 1 33 ASN 33 33 33 ASN ASN A . n A 1 34 PRO 34 34 34 PRO PRO A . n A 1 35 LEU 35 35 35 LEU LEU A . n A 1 36 GLY 36 36 36 GLY GLY A . n A 1 37 PHE 37 37 37 PHE PHE A . n A 1 38 LYS 38 38 38 LYS LYS A . n A 1 39 GLU 39 39 39 GLU GLU A . n A 1 40 SER 40 40 40 SER SER A . n A 1 41 TRP 41 41 41 TRP TRP A . n A 1 42 GLY 42 42 42 GLY GLY A . n A 1 43 PHE 43 43 43 PHE PHE A . n A 1 44 GLY 44 44 44 GLY GLY A . n A 1 45 LYS 45 45 45 LYS LYS A . n A 1 46 VAL 46 46 46 VAL VAL A . n A 1 47 VAL 47 47 47 VAL VAL A . n A 1 48 PHE 48 48 48 PHE PHE A . n A 1 49 LYS 49 49 49 LYS LYS A . n A 1 50 ARG 50 50 50 ARG ARG A . n A 1 51 TYR 51 51 51 TYR TYR A . n A 1 52 LEU 52 52 52 LEU LEU A . n A 1 53 ARG 53 53 53 ARG ARG A . n A 1 54 TYR 54 54 54 TYR TYR A . n A 1 55 ASP 55 55 55 ASP ASP A . n A 1 56 ARG 56 56 56 ARG ARG A . n A 1 57 THR 57 57 57 THR THR A . n A 1 58 GLU 58 58 58 GLU GLU A . n A 1 59 ALA 59 59 59 ALA ALA A . n A 1 60 SER 60 60 60 SER SER A . n A 1 61 LEU 61 61 61 LEU LEU A . n A 1 62 HIS 62 62 62 HIS HIS A . n A 1 63 ARG 63 63 63 ARG ARG A . n A 1 64 VAL 64 64 64 VAL VAL A . n A 1 65 LEU 65 65 65 LEU LEU A . n A 1 66 GLY 66 66 66 GLY GLY A . n A 1 67 SER 67 67 67 SER SER A . n A 1 68 TRP 68 68 68 TRP TRP A . n A 1 69 THR 69 69 69 THR THR A . n A 1 70 GLY 70 70 70 GLY GLY A . n A 1 71 ASP 71 71 71 ASP ASP A . n A 1 72 SER 72 72 72 SER SER A . n A 1 73 VAL 73 73 73 VAL VAL A . n A 1 74 ASN 74 74 74 ASN ASN A . n A 1 75 TYR 75 75 75 TYR TYR A . n A 1 76 ALA 76 76 76 ALA ALA A . n A 1 77 ALA 77 77 77 ALA ALA A . n A 1 78 SER 78 78 78 SER SER A . n A 1 79 ARG 79 79 79 ARG ARG A . n A 1 80 PHE 80 80 80 PHE PHE A . n A 1 81 PHE 81 81 81 PHE PHE A . n A 1 82 GLY 82 82 82 GLY GLY A . n A 1 83 PHE 83 83 83 PHE PHE A . n A 1 84 ASP 84 84 84 ASP ASP A . n A 1 85 GLN 85 85 85 GLN GLN A . n A 1 86 ILE 86 86 86 ILE ILE A . n A 1 87 GLY 87 87 87 GLY GLY A . n A 1 88 CYS 88 88 88 CYS CYS A . n A 1 89 THR 89 89 89 THR THR A . n A 1 90 TYR 90 90 90 TYR TYR A . n A 1 91 SER 91 91 91 SER SER A . n A 1 92 ILE 92 92 92 ILE ILE A . n A 1 93 ARG 93 93 93 ARG ARG A . n A 1 94 PHE 94 94 94 PHE PHE A . n A 1 95 ARG 95 95 95 ARG ARG A . n A 1 96 GLY 96 96 96 GLY GLY A . n A 1 97 VAL 97 97 97 VAL VAL A . n A 1 98 SER 98 98 98 SER SER A . n A 1 99 ILE 99 99 99 ILE ILE A . n A 1 100 THR 100 100 100 THR THR A . n A 1 101 VAL 101 101 101 VAL VAL A . n A 1 102 SER 102 102 102 SER SER A . n A 1 103 GLY 103 103 103 GLY GLY A . n A 1 104 GLY 104 104 104 GLY GLY A . n A 1 105 SER 105 105 105 SER SER A . n A 1 106 ARG 106 106 106 ARG ARG A . n A 1 107 THR 107 107 107 THR THR A . n A 1 108 LEU 108 108 108 LEU LEU A . n A 1 109 GLN 109 109 109 GLN GLN A . n A 1 110 HIS 110 110 110 HIS HIS A . n A 1 111 LEU 111 111 111 LEU LEU A . n A 1 112 CYS 112 112 112 CYS CYS A . n A 1 113 GLU 113 113 113 GLU GLU A . n A 1 114 MET 114 114 114 MET MET A . n A 1 115 ALA 115 115 115 ALA ALA A . n A 1 116 ILE 116 116 116 ILE ILE A . n A 1 117 ARG 117 117 117 ARG ARG A . n A 1 118 SER 118 118 118 SER SER A . n A 1 119 LYS 119 119 119 LYS LYS A . n A 1 120 GLN 120 120 120 GLN GLN A . n A 1 121 GLU 121 121 121 GLU GLU A . n A 1 122 LEU 122 122 122 LEU LEU A . n A 1 123 LEU 123 123 123 LEU LEU A . n A 1 124 GLN 124 124 124 GLN GLN A . n A 1 125 LEU 125 125 125 LEU LEU A . n A 1 126 ALA 126 126 126 ALA ALA A . n A 1 127 PRO 127 127 127 PRO PRO A . n B 2 1 C 1 1 1 C C B . n B 2 2 A 2 2 2 A A B . n B 2 3 G 3 3 3 G G B . n B 2 4 C 4 4 4 C C B . n B 2 5 A 5 5 5 A A B . n B 2 6 G 6 6 6 G G B . n B 2 7 C 7 7 7 C C B . n B 2 8 A 8 8 8 A A B . n B 2 9 G 9 9 9 G G B . n B 2 10 C 10 10 10 C C B . n B 2 11 C 11 11 11 C C B . n B 2 12 U 12 12 12 U U B . n B 2 13 G 13 13 13 G G B . n B 2 14 C 14 14 14 C C B . n B 2 15 U 15 15 15 U U B . n B 2 16 G 16 16 16 G G B . n B 2 17 C 17 17 17 C C B . n B 2 18 U 18 18 18 U U B . n B 2 19 G 19 19 19 G G B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SO4 1 201 1 SO4 SO4 A . D 3 SO4 1 202 2 SO4 SO4 A . E 3 SO4 1 203 3 SO4 SO4 A . F 3 SO4 1 204 4 SO4 SO4 A . G 4 HOH 1 301 1 HOH HOH A . G 4 HOH 2 302 2 HOH HOH A . G 4 HOH 3 303 3 HOH HOH A . G 4 HOH 4 304 4 HOH HOH A . G 4 HOH 5 305 5 HOH HOH A . G 4 HOH 6 306 6 HOH HOH A . G 4 HOH 7 307 7 HOH HOH A . G 4 HOH 8 308 8 HOH HOH A . G 4 HOH 9 309 9 HOH HOH A . G 4 HOH 10 310 10 HOH HOH A . G 4 HOH 11 311 11 HOH HOH A . G 4 HOH 12 312 12 HOH HOH A . G 4 HOH 13 313 13 HOH HOH A . G 4 HOH 14 314 14 HOH HOH A . G 4 HOH 15 315 15 HOH HOH A . G 4 HOH 16 316 16 HOH HOH A . G 4 HOH 17 317 17 HOH HOH A . G 4 HOH 18 318 18 HOH HOH A . G 4 HOH 19 319 19 HOH HOH A . G 4 HOH 20 320 20 HOH HOH A . G 4 HOH 21 321 21 HOH HOH A . G 4 HOH 22 322 22 HOH HOH A . G 4 HOH 23 323 23 HOH HOH A . G 4 HOH 24 324 24 HOH HOH A . G 4 HOH 25 325 25 HOH HOH A . G 4 HOH 26 326 26 HOH HOH A . G 4 HOH 27 327 27 HOH HOH A . G 4 HOH 28 328 28 HOH HOH A . G 4 HOH 29 329 29 HOH HOH A . G 4 HOH 30 330 30 HOH HOH A . G 4 HOH 31 331 31 HOH HOH A . G 4 HOH 32 332 32 HOH HOH A . G 4 HOH 33 333 33 HOH HOH A . G 4 HOH 34 334 34 HOH HOH A . G 4 HOH 35 335 35 HOH HOH A . G 4 HOH 36 336 36 HOH HOH A . G 4 HOH 37 337 37 HOH HOH A . G 4 HOH 38 338 38 HOH HOH A . G 4 HOH 39 339 39 HOH HOH A . G 4 HOH 40 340 40 HOH HOH A . G 4 HOH 41 341 41 HOH HOH A . G 4 HOH 42 342 42 HOH HOH A . G 4 HOH 43 343 43 HOH HOH A . G 4 HOH 44 344 44 HOH HOH A . G 4 HOH 45 345 45 HOH HOH A . G 4 HOH 46 346 46 HOH HOH A . G 4 HOH 47 347 47 HOH HOH A . G 4 HOH 48 348 48 HOH HOH A . G 4 HOH 49 349 49 HOH HOH A . G 4 HOH 50 350 50 HOH HOH A . G 4 HOH 51 351 51 HOH HOH A . G 4 HOH 52 352 52 HOH HOH A . G 4 HOH 53 353 53 HOH HOH A . G 4 HOH 54 354 54 HOH HOH A . G 4 HOH 55 355 55 HOH HOH A . G 4 HOH 56 356 56 HOH HOH A . G 4 HOH 57 357 57 HOH HOH A . G 4 HOH 58 358 58 HOH HOH A . G 4 HOH 59 359 59 HOH HOH A . G 4 HOH 60 360 60 HOH HOH A . G 4 HOH 61 361 61 HOH HOH A . G 4 HOH 62 362 62 HOH HOH A . G 4 HOH 63 363 63 HOH HOH A . G 4 HOH 64 364 64 HOH HOH A . G 4 HOH 65 365 65 HOH HOH A . G 4 HOH 66 366 66 HOH HOH A . G 4 HOH 67 367 67 HOH HOH A . G 4 HOH 68 368 68 HOH HOH A . G 4 HOH 69 369 69 HOH HOH A . G 4 HOH 70 370 70 HOH HOH A . G 4 HOH 71 371 71 HOH HOH A . G 4 HOH 72 372 72 HOH HOH A . G 4 HOH 73 373 73 HOH HOH A . G 4 HOH 74 374 74 HOH HOH A . G 4 HOH 75 375 75 HOH HOH A . G 4 HOH 76 376 76 HOH HOH A . G 4 HOH 77 377 77 HOH HOH A . G 4 HOH 78 378 78 HOH HOH A . G 4 HOH 79 379 79 HOH HOH A . G 4 HOH 80 380 80 HOH HOH A . G 4 HOH 81 381 81 HOH HOH A . G 4 HOH 82 382 82 HOH HOH A . G 4 HOH 83 383 83 HOH HOH A . G 4 HOH 84 384 84 HOH HOH A . G 4 HOH 85 385 85 HOH HOH A . G 4 HOH 86 386 86 HOH HOH A . G 4 HOH 87 387 87 HOH HOH A . G 4 HOH 88 388 88 HOH HOH A . G 4 HOH 89 389 89 HOH HOH A . G 4 HOH 90 390 90 HOH HOH A . G 4 HOH 91 391 91 HOH HOH A . G 4 HOH 92 392 92 HOH HOH A . G 4 HOH 93 393 93 HOH HOH A . G 4 HOH 94 394 94 HOH HOH A . G 4 HOH 95 395 95 HOH HOH A . G 4 HOH 96 396 96 HOH HOH A . G 4 HOH 97 397 97 HOH HOH A . G 4 HOH 98 398 98 HOH HOH A . G 4 HOH 99 399 99 HOH HOH A . G 4 HOH 100 400 100 HOH HOH A . G 4 HOH 101 401 101 HOH HOH A . G 4 HOH 102 402 102 HOH HOH A . G 4 HOH 103 403 103 HOH HOH A . G 4 HOH 104 404 104 HOH HOH A . G 4 HOH 105 405 105 HOH HOH A . G 4 HOH 106 406 106 HOH HOH A . G 4 HOH 107 407 107 HOH HOH A . G 4 HOH 108 408 111 HOH HOH A . G 4 HOH 109 409 112 HOH HOH A . G 4 HOH 110 410 113 HOH HOH A . G 4 HOH 111 411 114 HOH HOH A . G 4 HOH 112 412 115 HOH HOH A . G 4 HOH 113 413 116 HOH HOH A . G 4 HOH 114 414 122 HOH HOH A . G 4 HOH 115 415 132 HOH HOH A . G 4 HOH 116 416 147 HOH HOH A . G 4 HOH 117 417 152 HOH HOH A . H 4 HOH 1 101 108 HOH HOH B . H 4 HOH 2 102 109 HOH HOH B . H 4 HOH 3 103 110 HOH HOH B . H 4 HOH 4 104 117 HOH HOH B . H 4 HOH 5 105 118 HOH HOH B . H 4 HOH 6 106 119 HOH HOH B . H 4 HOH 7 107 120 HOH HOH B . H 4 HOH 8 108 121 HOH HOH B . H 4 HOH 9 109 123 HOH HOH B . H 4 HOH 10 110 124 HOH HOH B . H 4 HOH 11 111 125 HOH HOH B . H 4 HOH 12 112 126 HOH HOH B . H 4 HOH 13 113 127 HOH HOH B . H 4 HOH 14 114 128 HOH HOH B . H 4 HOH 15 115 129 HOH HOH B . H 4 HOH 16 116 130 HOH HOH B . H 4 HOH 17 117 131 HOH HOH B . H 4 HOH 18 118 133 HOH HOH B . H 4 HOH 19 119 134 HOH HOH B . H 4 HOH 20 120 136 HOH HOH B . H 4 HOH 21 121 137 HOH HOH B . H 4 HOH 22 122 138 HOH HOH B . H 4 HOH 23 123 139 HOH HOH B . H 4 HOH 24 124 140 HOH HOH B . H 4 HOH 25 125 141 HOH HOH B . H 4 HOH 26 126 142 HOH HOH B . H 4 HOH 27 127 143 HOH HOH B . H 4 HOH 28 128 144 HOH HOH B . H 4 HOH 29 129 145 HOH HOH B . H 4 HOH 30 130 146 HOH HOH B . H 4 HOH 31 131 148 HOH HOH B . H 4 HOH 32 132 149 HOH HOH B . H 4 HOH 33 133 150 HOH HOH B . H 4 HOH 34 134 151 HOH HOH B . # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 REFMAC 5.2.0019 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 2 PDB_EXTRACT 3.11 'April 22, 2011' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 ADSC Quantum ? ? ? ? 'data collection' ? ? ? 4 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 5 HKL-2000 . ? ? ? ? 'data scaling' ? ? ? 6 CNS . ? ? ? ? phasing ? ? ? # _cell.entry_id 4J39 _cell.length_a 90.611 _cell.length_b 90.611 _cell.length_c 148.521 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4J39 _symmetry.space_group_name_H-M 'H 3 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? # _exptl.entry_id 4J39 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.89 _exptl_crystal.density_percent_sol 57.44 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '1.3 mM ammonium sulfate, 0.1 M MES, pH 6, VAPOR DIFFUSION, HANGING DROP, temperature 291K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2011-11-22 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9724 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID23-1' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID23-1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9724 # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4J39 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 20.0 _reflns.d_resolution_high 1.7 _reflns.number_obs 25529 _reflns.number_all ? _reflns.percent_possible_obs 99.1 _reflns.pdbx_Rmerge_I_obs 0.075 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 13.3 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4.8 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4J39 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 24226 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 15.00 _refine.ls_d_res_high 1.70 _refine.ls_percent_reflns_obs 98.59 _refine.ls_R_factor_obs 0.18175 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.18048 _refine.ls_R_factor_R_free 0.20695 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.9 _refine.ls_number_reflns_R_free 1255 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min 0.330 _refine.occupancy_max 1.000 _refine.correlation_coeff_Fo_to_Fc 0.972 _refine.correlation_coeff_Fo_to_Fc_free 0.959 _refine.B_iso_mean 36.088 _refine.aniso_B[1][1] 2.77 _refine.aniso_B[2][2] 2.77 _refine.aniso_B[3][3] -4.16 _refine.aniso_B[1][2] 1.39 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.094 _refine.pdbx_overall_ESU_R_Free 0.093 _refine.overall_SU_ML 0.074 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 2.286 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 990 _refine_hist.pdbx_number_atoms_nucleic_acid 405 _refine_hist.pdbx_number_atoms_ligand 20 _refine_hist.number_atoms_solvent 151 _refine_hist.number_atoms_total 1566 _refine_hist.d_res_high 1.70 _refine_hist.d_res_low 15.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.028 0.021 ? 1521 'X-RAY DIFFRACTION' ? r_bond_other_d 0.001 0.020 ? 903 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.479 2.306 ? 2154 'X-RAY DIFFRACTION' ? r_angle_other_deg 2.595 3.000 ? 2205 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.963 5.000 ? 120 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 33.427 22.407 ? 54 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 14.347 15.000 ? 181 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 13.373 15.000 ? 11 'X-RAY DIFFRACTION' ? r_chiral_restr 0.218 0.200 ? 244 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.012 0.020 ? 1350 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 284 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.188 0.200 ? 79 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.149 0.200 ? 29 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.389 0.200 ? 73 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.189 0.200 ? 31 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.810 1.500 ? 607 'X-RAY DIFFRACTION' ? r_mcbond_other 0.535 1.500 ? 248 'X-RAY DIFFRACTION' ? r_mcangle_it 3.003 2.000 ? 982 'X-RAY DIFFRACTION' ? r_scbond_it 3.261 3.000 ? 914 'X-RAY DIFFRACTION' ? r_scangle_it 4.543 4.500 ? 1172 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.70 _refine_ls_shell.d_res_low 1.748 _refine_ls_shell.number_reflns_R_work 1604 _refine_ls_shell.R_factor_R_work 0.295 _refine_ls_shell.percent_reflns_obs 90.98 _refine_ls_shell.R_factor_R_free 0.270 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 101 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 4J39 _struct.title 'Crystal structure of p19 in complex with double-helical 19mer RNA p(CAG)3C(CUG)3' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4J39 _struct_keywords.text 'RNA silencing suppression, trinucleotide repeats, dimer, RNA BINDING PROTEIN-RNA complex' _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN/RNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 4 ? H N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP P19_TBSVK P69517 1 ;TSPFKLPDESPSWTEWRLHNDETNSNQDNPLGFKESWGFGKVVFKRYLRYDRTEASLHRVLGSWTGDSVNYAASRFFGFD QIGCTYSIRFRGVSITVSGGSRTLQHLCEMAIRSKQELLQLAP ; 27 ? 2 PDB 4J39 4J39 2 CAGCAGCAGCCUGCUGCUG 1 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4J39 A 5 ? 127 ? P69517 27 ? 149 ? 5 127 2 2 4J39 B 1 ? 19 ? 4J39 1 ? 19 ? 1 19 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4J39 GLY A 1 ? UNP P69517 ? ? 'expression tag' 1 1 1 4J39 SER A 2 ? UNP P69517 ? ? 'expression tag' 2 2 1 4J39 HIS A 3 ? UNP P69517 ? ? 'expression tag' 3 3 1 4J39 MET A 4 ? UNP P69517 ? ? 'expression tag' 4 4 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 8510 ? 1 MORE -153 ? 1 'SSA (A^2)' 17040 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_555 y,x,-z -0.5000000000 0.8660254038 0.0000000000 0.0000000000 0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # _struct_biol.id 1 _struct_biol.details 'THE BIOLOGICAL UNIT IS A P19 HOMODIMER BOUND TO DOUBLE-STRANDED RNA.' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 16 ? THR A 27 ? SER A 16 THR A 27 1 ? 12 HELX_P HELX_P2 2 THR A 57 ? GLY A 66 ? THR A 57 GLY A 66 1 ? 10 HELX_P HELX_P3 3 THR A 69 ? ARG A 79 ? THR A 69 ARG A 79 1 ? 11 HELX_P HELX_P4 4 THR A 107 ? LEU A 125 ? THR A 107 LEU A 125 1 ? 19 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? B C 1 N3 ? ? ? 1_555 B G 19 N1 ? ? B C 1 B G 19 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B C 1 N4 ? ? ? 1_555 B G 19 O6 ? ? B C 1 B G 19 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B C 1 O2 ? ? ? 1_555 B G 19 N2 ? ? B C 1 B G 19 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B A 2 N1 ? ? ? 1_555 B U 18 N3 ? ? B A 2 B U 18 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B A 2 N6 ? ? ? 1_555 B U 18 O4 ? ? B A 2 B U 18 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B G 3 N1 ? ? ? 1_555 B C 17 N3 ? ? B G 3 B C 17 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B G 3 N2 ? ? ? 1_555 B C 17 O2 ? ? B G 3 B C 17 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B G 3 O6 ? ? ? 1_555 B C 17 N4 ? ? B G 3 B C 17 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B C 4 N3 ? ? ? 1_555 B G 16 N1 ? ? B C 4 B G 16 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B C 4 N4 ? ? ? 1_555 B G 16 O6 ? ? B C 4 B G 16 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B C 4 O2 ? ? ? 1_555 B G 16 N2 ? ? B C 4 B G 16 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B A 5 N1 ? ? ? 1_555 B U 15 N3 ? ? B A 5 B U 15 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B A 5 N6 ? ? ? 1_555 B U 15 O4 ? ? B A 5 B U 15 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B G 6 N1 ? ? ? 1_555 B C 14 N3 ? ? B G 6 B C 14 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B G 6 N2 ? ? ? 1_555 B C 14 O2 ? ? B G 6 B C 14 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B G 6 O6 ? ? ? 1_555 B C 14 N4 ? ? B G 6 B C 14 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B C 7 N3 ? ? ? 1_555 B G 13 N1 ? ? B C 7 B G 13 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B C 7 N4 ? ? ? 1_555 B G 13 O6 ? ? B C 7 B G 13 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B C 7 O2 ? ? ? 1_555 B G 13 N2 ? ? B C 7 B G 13 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B A 8 N1 ? ? ? 1_555 B U 12 N3 ? ? B A 8 B U 12 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B A 8 N6 ? ? ? 1_555 B U 12 O4 ? ? B A 8 B U 12 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B G 9 N1 ? ? ? 1_555 B C 11 N3 ? ? B G 9 B C 11 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B G 9 N2 ? ? ? 1_555 B C 11 O2 ? ? B G 9 B C 11 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B G 9 O6 ? ? ? 1_555 B C 11 N4 ? ? B G 9 B C 11 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B C 11 N3 ? ? ? 1_555 B G 9 N1 ? ? B C 11 B G 9 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B C 11 N4 ? ? ? 1_555 B G 9 O6 ? ? B C 11 B G 9 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B C 11 O2 ? ? ? 1_555 B G 9 N2 ? ? B C 11 B G 9 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B U 12 N3 ? ? ? 1_555 B A 8 N1 ? ? B U 12 B A 8 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B U 12 O4 ? ? ? 1_555 B A 8 N6 ? ? B U 12 B A 8 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B G 13 N1 ? ? ? 1_555 B C 7 N3 ? ? B G 13 B C 7 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? B G 13 N2 ? ? ? 1_555 B C 7 O2 ? ? B G 13 B C 7 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? B G 13 O6 ? ? ? 1_555 B C 7 N4 ? ? B G 13 B C 7 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? B C 14 N3 ? ? ? 1_555 B G 6 N1 ? ? B C 14 B G 6 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? B C 14 N4 ? ? ? 1_555 B G 6 O6 ? ? B C 14 B G 6 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? B C 14 O2 ? ? ? 1_555 B G 6 N2 ? ? B C 14 B G 6 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? B U 15 N3 ? ? ? 1_555 B A 5 N1 ? ? B U 15 B A 5 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? B U 15 O4 ? ? ? 1_555 B A 5 N6 ? ? B U 15 B A 5 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? B G 16 N1 ? ? ? 1_555 B C 4 N3 ? ? B G 16 B C 4 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? B G 16 N2 ? ? ? 1_555 B C 4 O2 ? ? B G 16 B C 4 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? B G 16 O6 ? ? ? 1_555 B C 4 N4 ? ? B G 16 B C 4 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? B C 17 N3 ? ? ? 1_555 B G 3 N1 ? ? B C 17 B G 3 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? B C 17 N4 ? ? ? 1_555 B G 3 O6 ? ? B C 17 B G 3 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? B C 17 O2 ? ? ? 1_555 B G 3 N2 ? ? B C 17 B G 3 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? B U 18 N3 ? ? ? 1_555 B A 2 N1 ? ? B U 18 B A 2 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? B U 18 O4 ? ? ? 1_555 B A 2 N6 ? ? B U 18 B A 2 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? B G 19 N1 ? ? ? 1_555 B C 1 N3 ? ? B G 19 B C 1 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? B G 19 N2 ? ? ? 1_555 B C 1 O2 ? ? B G 19 B C 1 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? B G 19 O6 ? ? ? 1_555 B C 1 N4 ? ? B G 19 B C 1 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 4 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 46 ? ARG A 53 ? VAL A 46 ARG A 53 A 2 GLY A 36 ? PHE A 43 ? GLY A 36 PHE A 43 A 3 GLY A 87 ? PHE A 94 ? GLY A 87 PHE A 94 A 4 VAL A 97 ? GLY A 104 ? VAL A 97 GLY A 104 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ARG A 50 ? O ARG A 50 N GLU A 39 ? N GLU A 39 A 2 3 N GLY A 42 ? N GLY A 42 O THR A 89 ? O THR A 89 A 3 4 N TYR A 90 ? N TYR A 90 O VAL A 101 ? O VAL A 101 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SO4 201 ? 5 'BINDING SITE FOR RESIDUE SO4 A 201' AC2 Software A SO4 202 ? 5 'BINDING SITE FOR RESIDUE SO4 A 202' AC3 Software A SO4 203 ? 3 'BINDING SITE FOR RESIDUE SO4 A 203' AC4 Software A SO4 204 ? 5 'BINDING SITE FOR RESIDUE SO4 A 204' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 SER A 6 ? SER A 6 . ? 1_555 ? 2 AC1 5 PHE A 48 ? PHE A 48 . ? 1_555 ? 3 AC1 5 ARG A 50 ? ARG A 50 . ? 1_555 ? 4 AC1 5 HOH G . ? HOH A 315 . ? 1_555 ? 5 AC1 5 HOH G . ? HOH A 341 . ? 1_555 ? 6 AC2 5 SER A 16 ? SER A 16 . ? 1_555 ? 7 AC2 5 THR A 18 ? THR A 18 . ? 1_555 ? 8 AC2 5 HIS A 62 ? HIS A 62 . ? 12_555 ? 9 AC2 5 HOH G . ? HOH A 303 . ? 1_555 ? 10 AC2 5 HOH G . ? HOH A 316 . ? 1_555 ? 11 AC3 3 THR A 69 ? THR A 69 . ? 1_555 ? 12 AC3 3 GLY A 70 ? GLY A 70 . ? 1_555 ? 13 AC3 3 ILE A 116 ? ILE A 116 . ? 1_555 ? 14 AC4 5 GLN A 31 ? GLN A 31 . ? 1_555 ? 15 AC4 5 ARG A 93 ? ARG A 93 . ? 1_555 ? 16 AC4 5 ARG A 95 ? ARG A 95 . ? 1_555 ? 17 AC4 5 GLY A 96 ? GLY A 96 . ? 1_555 ? 18 AC4 5 HOH G . ? HOH A 357 . ? 1_555 ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 NE2 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 GLN _pdbx_validate_close_contact.auth_seq_id_1 120 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 A _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 402 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.10 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CE1 A TYR 90 ? ? CZ A TYR 90 ? ? 1.472 1.381 0.091 0.013 N 2 1 CB A CYS 112 ? ? SG A CYS 112 ? ? 1.920 1.818 0.102 0.017 N 3 1 P B C 1 ? A OP3 B C 1 ? A 1.486 1.607 -0.121 0.012 N 4 1 P B C 1 ? B OP3 B C 1 ? B 1.476 1.607 -0.131 0.012 N 5 1 "O5'" B G 9 ? ? "C5'" B G 9 ? ? 1.366 1.420 -0.054 0.009 N 6 1 N3 B G 13 ? ? C4 B G 13 ? ? 1.422 1.350 0.072 0.007 N 7 1 C2 B U 18 ? ? N3 B U 18 ? ? 1.416 1.373 0.043 0.007 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 OE1 A GLU 39 ? ? CD A GLU 39 ? ? OE2 A GLU 39 ? ? 130.69 123.30 7.39 1.20 N 2 1 CB A LEU 65 ? ? CG A LEU 65 ? ? CD1 A LEU 65 ? ? 122.92 111.00 11.92 1.70 N 3 1 CG1 A VAL 97 ? ? CB A VAL 97 ? ? CG2 A VAL 97 ? ? 123.22 110.90 12.32 1.60 N 4 1 NE A ARG 117 ? ? CZ A ARG 117 ? ? NH1 A ARG 117 ? ? 124.80 120.30 4.50 0.50 N 5 1 "O5'" B C 1 ? B P B C 1 ? B OP2 B C 1 ? B 97.02 105.70 -8.68 0.90 N 6 1 C2 B A 2 ? ? N3 B A 2 ? ? C4 B A 2 ? ? 106.94 110.60 -3.66 0.50 N 7 1 C5 B A 2 ? ? N7 B A 2 ? ? C8 B A 2 ? ? 100.79 103.90 -3.11 0.50 N 8 1 N3 B G 3 ? ? C4 B G 3 ? ? C5 B G 3 ? ? 131.74 128.60 3.14 0.50 N 9 1 N1 B C 4 ? ? C2 B C 4 ? ? O2 B C 4 ? ? 122.53 118.90 3.63 0.60 N 10 1 "O4'" B A 8 ? ? "C1'" B A 8 ? ? N9 B A 8 ? ? 113.95 108.50 5.45 0.70 N 11 1 "O4'" B C 10 ? ? "C1'" B C 10 ? ? N1 B C 10 ? ? 113.02 108.50 4.52 0.70 N 12 1 OP1 B C 11 ? ? P B C 11 ? ? OP2 B C 11 ? ? 129.68 119.60 10.08 1.50 N 13 1 "O5'" B C 11 ? ? P B C 11 ? ? OP2 B C 11 ? ? 99.62 105.70 -6.08 0.90 N 14 1 C2 B U 12 ? ? N3 B U 12 ? ? C4 B U 12 ? ? 130.85 127.00 3.85 0.60 N 15 1 "O4'" B U 18 ? ? "C1'" B U 18 ? ? N1 B U 18 ? ? 113.36 108.50 4.86 0.70 N # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 322 ? G HOH . 2 1 A HOH 365 ? G HOH . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 1 ? A GLY 1 2 1 Y 1 A SER 2 ? A SER 2 3 1 Y 1 A HIS 3 ? A HIS 3 4 1 Y 1 A ASN 28 ? A ASN 28 5 1 Y 1 A SER 29 ? A SER 29 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 C OP3 O N N 111 C P P N N 112 C OP1 O N N 113 C OP2 O N N 114 C "O5'" O N N 115 C "C5'" C N N 116 C "C4'" C N R 117 C "O4'" O N N 118 C "C3'" C N S 119 C "O3'" O N N 120 C "C2'" C N R 121 C "O2'" O N N 122 C "C1'" C N R 123 C N1 N N N 124 C C2 C N N 125 C O2 O N N 126 C N3 N N N 127 C C4 C N N 128 C N4 N N N 129 C C5 C N N 130 C C6 C N N 131 C HOP3 H N N 132 C HOP2 H N N 133 C "H5'" H N N 134 C "H5''" H N N 135 C "H4'" H N N 136 C "H3'" H N N 137 C "HO3'" H N N 138 C "H2'" H N N 139 C "HO2'" H N N 140 C "H1'" H N N 141 C H41 H N N 142 C H42 H N N 143 C H5 H N N 144 C H6 H N N 145 CYS N N N N 146 CYS CA C N R 147 CYS C C N N 148 CYS O O N N 149 CYS CB C N N 150 CYS SG S N N 151 CYS OXT O N N 152 CYS H H N N 153 CYS H2 H N N 154 CYS HA H N N 155 CYS HB2 H N N 156 CYS HB3 H N N 157 CYS HG H N N 158 CYS HXT H N N 159 G OP3 O N N 160 G P P N N 161 G OP1 O N N 162 G OP2 O N N 163 G "O5'" O N N 164 G "C5'" C N N 165 G "C4'" C N R 166 G "O4'" O N N 167 G "C3'" C N S 168 G "O3'" O N N 169 G "C2'" C N R 170 G "O2'" O N N 171 G "C1'" C N R 172 G N9 N Y N 173 G C8 C Y N 174 G N7 N Y N 175 G C5 C Y N 176 G C6 C N N 177 G O6 O N N 178 G N1 N N N 179 G C2 C N N 180 G N2 N N N 181 G N3 N N N 182 G C4 C Y N 183 G HOP3 H N N 184 G HOP2 H N N 185 G "H5'" H N N 186 G "H5''" H N N 187 G "H4'" H N N 188 G "H3'" H N N 189 G "HO3'" H N N 190 G "H2'" H N N 191 G "HO2'" H N N 192 G "H1'" H N N 193 G H8 H N N 194 G H1 H N N 195 G H21 H N N 196 G H22 H N N 197 GLN N N N N 198 GLN CA C N S 199 GLN C C N N 200 GLN O O N N 201 GLN CB C N N 202 GLN CG C N N 203 GLN CD C N N 204 GLN OE1 O N N 205 GLN NE2 N N N 206 GLN OXT O N N 207 GLN H H N N 208 GLN H2 H N N 209 GLN HA H N N 210 GLN HB2 H N N 211 GLN HB3 H N N 212 GLN HG2 H N N 213 GLN HG3 H N N 214 GLN HE21 H N N 215 GLN HE22 H N N 216 GLN HXT H N N 217 GLU N N N N 218 GLU CA C N S 219 GLU C C N N 220 GLU O O N N 221 GLU CB C N N 222 GLU CG C N N 223 GLU CD C N N 224 GLU OE1 O N N 225 GLU OE2 O N N 226 GLU OXT O N N 227 GLU H H N N 228 GLU H2 H N N 229 GLU HA H N N 230 GLU HB2 H N N 231 GLU HB3 H N N 232 GLU HG2 H N N 233 GLU HG3 H N N 234 GLU HE2 H N N 235 GLU HXT H N N 236 GLY N N N N 237 GLY CA C N N 238 GLY C C N N 239 GLY O O N N 240 GLY OXT O N N 241 GLY H H N N 242 GLY H2 H N N 243 GLY HA2 H N N 244 GLY HA3 H N N 245 GLY HXT H N N 246 HIS N N N N 247 HIS CA C N S 248 HIS C C N N 249 HIS O O N N 250 HIS CB C N N 251 HIS CG C Y N 252 HIS ND1 N Y N 253 HIS CD2 C Y N 254 HIS CE1 C Y N 255 HIS NE2 N Y N 256 HIS OXT O N N 257 HIS H H N N 258 HIS H2 H N N 259 HIS HA H N N 260 HIS HB2 H N N 261 HIS HB3 H N N 262 HIS HD1 H N N 263 HIS HD2 H N N 264 HIS HE1 H N N 265 HIS HE2 H N N 266 HIS HXT H N N 267 HOH O O N N 268 HOH H1 H N N 269 HOH H2 H N N 270 ILE N N N N 271 ILE CA C N S 272 ILE C C N N 273 ILE O O N N 274 ILE CB C N S 275 ILE CG1 C N N 276 ILE CG2 C N N 277 ILE CD1 C N N 278 ILE OXT O N N 279 ILE H H N N 280 ILE H2 H N N 281 ILE HA H N N 282 ILE HB H N N 283 ILE HG12 H N N 284 ILE HG13 H N N 285 ILE HG21 H N N 286 ILE HG22 H N N 287 ILE HG23 H N N 288 ILE HD11 H N N 289 ILE HD12 H N N 290 ILE HD13 H N N 291 ILE HXT H N N 292 LEU N N N N 293 LEU CA C N S 294 LEU C C N N 295 LEU O O N N 296 LEU CB C N N 297 LEU CG C N N 298 LEU CD1 C N N 299 LEU CD2 C N N 300 LEU OXT O N N 301 LEU H H N N 302 LEU H2 H N N 303 LEU HA H N N 304 LEU HB2 H N N 305 LEU HB3 H N N 306 LEU HG H N N 307 LEU HD11 H N N 308 LEU HD12 H N N 309 LEU HD13 H N N 310 LEU HD21 H N N 311 LEU HD22 H N N 312 LEU HD23 H N N 313 LEU HXT H N N 314 LYS N N N N 315 LYS CA C N S 316 LYS C C N N 317 LYS O O N N 318 LYS CB C N N 319 LYS CG C N N 320 LYS CD C N N 321 LYS CE C N N 322 LYS NZ N N N 323 LYS OXT O N N 324 LYS H H N N 325 LYS H2 H N N 326 LYS HA H N N 327 LYS HB2 H N N 328 LYS HB3 H N N 329 LYS HG2 H N N 330 LYS HG3 H N N 331 LYS HD2 H N N 332 LYS HD3 H N N 333 LYS HE2 H N N 334 LYS HE3 H N N 335 LYS HZ1 H N N 336 LYS HZ2 H N N 337 LYS HZ3 H N N 338 LYS HXT H N N 339 MET N N N N 340 MET CA C N S 341 MET C C N N 342 MET O O N N 343 MET CB C N N 344 MET CG C N N 345 MET SD S N N 346 MET CE C N N 347 MET OXT O N N 348 MET H H N N 349 MET H2 H N N 350 MET HA H N N 351 MET HB2 H N N 352 MET HB3 H N N 353 MET HG2 H N N 354 MET HG3 H N N 355 MET HE1 H N N 356 MET HE2 H N N 357 MET HE3 H N N 358 MET HXT H N N 359 PHE N N N N 360 PHE CA C N S 361 PHE C C N N 362 PHE O O N N 363 PHE CB C N N 364 PHE CG C Y N 365 PHE CD1 C Y N 366 PHE CD2 C Y N 367 PHE CE1 C Y N 368 PHE CE2 C Y N 369 PHE CZ C Y N 370 PHE OXT O N N 371 PHE H H N N 372 PHE H2 H N N 373 PHE HA H N N 374 PHE HB2 H N N 375 PHE HB3 H N N 376 PHE HD1 H N N 377 PHE HD2 H N N 378 PHE HE1 H N N 379 PHE HE2 H N N 380 PHE HZ H N N 381 PHE HXT H N N 382 PRO N N N N 383 PRO CA C N S 384 PRO C C N N 385 PRO O O N N 386 PRO CB C N N 387 PRO CG C N N 388 PRO CD C N N 389 PRO OXT O N N 390 PRO H H N N 391 PRO HA H N N 392 PRO HB2 H N N 393 PRO HB3 H N N 394 PRO HG2 H N N 395 PRO HG3 H N N 396 PRO HD2 H N N 397 PRO HD3 H N N 398 PRO HXT H N N 399 SER N N N N 400 SER CA C N S 401 SER C C N N 402 SER O O N N 403 SER CB C N N 404 SER OG O N N 405 SER OXT O N N 406 SER H H N N 407 SER H2 H N N 408 SER HA H N N 409 SER HB2 H N N 410 SER HB3 H N N 411 SER HG H N N 412 SER HXT H N N 413 SO4 S S N N 414 SO4 O1 O N N 415 SO4 O2 O N N 416 SO4 O3 O N N 417 SO4 O4 O N N 418 THR N N N N 419 THR CA C N S 420 THR C C N N 421 THR O O N N 422 THR CB C N R 423 THR OG1 O N N 424 THR CG2 C N N 425 THR OXT O N N 426 THR H H N N 427 THR H2 H N N 428 THR HA H N N 429 THR HB H N N 430 THR HG1 H N N 431 THR HG21 H N N 432 THR HG22 H N N 433 THR HG23 H N N 434 THR HXT H N N 435 TRP N N N N 436 TRP CA C N S 437 TRP C C N N 438 TRP O O N N 439 TRP CB C N N 440 TRP CG C Y N 441 TRP CD1 C Y N 442 TRP CD2 C Y N 443 TRP NE1 N Y N 444 TRP CE2 C Y N 445 TRP CE3 C Y N 446 TRP CZ2 C Y N 447 TRP CZ3 C Y N 448 TRP CH2 C Y N 449 TRP OXT O N N 450 TRP H H N N 451 TRP H2 H N N 452 TRP HA H N N 453 TRP HB2 H N N 454 TRP HB3 H N N 455 TRP HD1 H N N 456 TRP HE1 H N N 457 TRP HE3 H N N 458 TRP HZ2 H N N 459 TRP HZ3 H N N 460 TRP HH2 H N N 461 TRP HXT H N N 462 TYR N N N N 463 TYR CA C N S 464 TYR C C N N 465 TYR O O N N 466 TYR CB C N N 467 TYR CG C Y N 468 TYR CD1 C Y N 469 TYR CD2 C Y N 470 TYR CE1 C Y N 471 TYR CE2 C Y N 472 TYR CZ C Y N 473 TYR OH O N N 474 TYR OXT O N N 475 TYR H H N N 476 TYR H2 H N N 477 TYR HA H N N 478 TYR HB2 H N N 479 TYR HB3 H N N 480 TYR HD1 H N N 481 TYR HD2 H N N 482 TYR HE1 H N N 483 TYR HE2 H N N 484 TYR HH H N N 485 TYR HXT H N N 486 U OP3 O N N 487 U P P N N 488 U OP1 O N N 489 U OP2 O N N 490 U "O5'" O N N 491 U "C5'" C N N 492 U "C4'" C N R 493 U "O4'" O N N 494 U "C3'" C N S 495 U "O3'" O N N 496 U "C2'" C N R 497 U "O2'" O N N 498 U "C1'" C N R 499 U N1 N N N 500 U C2 C N N 501 U O2 O N N 502 U N3 N N N 503 U C4 C N N 504 U O4 O N N 505 U C5 C N N 506 U C6 C N N 507 U HOP3 H N N 508 U HOP2 H N N 509 U "H5'" H N N 510 U "H5''" H N N 511 U "H4'" H N N 512 U "H3'" H N N 513 U "HO3'" H N N 514 U "H2'" H N N 515 U "HO2'" H N N 516 U "H1'" H N N 517 U H3 H N N 518 U H5 H N N 519 U H6 H N N 520 VAL N N N N 521 VAL CA C N S 522 VAL C C N N 523 VAL O O N N 524 VAL CB C N N 525 VAL CG1 C N N 526 VAL CG2 C N N 527 VAL OXT O N N 528 VAL H H N N 529 VAL H2 H N N 530 VAL HA H N N 531 VAL HB H N N 532 VAL HG11 H N N 533 VAL HG12 H N N 534 VAL HG13 H N N 535 VAL HG21 H N N 536 VAL HG22 H N N 537 VAL HG23 H N N 538 VAL HXT H N N 539 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 C OP3 P sing N N 109 C OP3 HOP3 sing N N 110 C P OP1 doub N N 111 C P OP2 sing N N 112 C P "O5'" sing N N 113 C OP2 HOP2 sing N N 114 C "O5'" "C5'" sing N N 115 C "C5'" "C4'" sing N N 116 C "C5'" "H5'" sing N N 117 C "C5'" "H5''" sing N N 118 C "C4'" "O4'" sing N N 119 C "C4'" "C3'" sing N N 120 C "C4'" "H4'" sing N N 121 C "O4'" "C1'" sing N N 122 C "C3'" "O3'" sing N N 123 C "C3'" "C2'" sing N N 124 C "C3'" "H3'" sing N N 125 C "O3'" "HO3'" sing N N 126 C "C2'" "O2'" sing N N 127 C "C2'" "C1'" sing N N 128 C "C2'" "H2'" sing N N 129 C "O2'" "HO2'" sing N N 130 C "C1'" N1 sing N N 131 C "C1'" "H1'" sing N N 132 C N1 C2 sing N N 133 C N1 C6 sing N N 134 C C2 O2 doub N N 135 C C2 N3 sing N N 136 C N3 C4 doub N N 137 C C4 N4 sing N N 138 C C4 C5 sing N N 139 C N4 H41 sing N N 140 C N4 H42 sing N N 141 C C5 C6 doub N N 142 C C5 H5 sing N N 143 C C6 H6 sing N N 144 CYS N CA sing N N 145 CYS N H sing N N 146 CYS N H2 sing N N 147 CYS CA C sing N N 148 CYS CA CB sing N N 149 CYS CA HA sing N N 150 CYS C O doub N N 151 CYS C OXT sing N N 152 CYS CB SG sing N N 153 CYS CB HB2 sing N N 154 CYS CB HB3 sing N N 155 CYS SG HG sing N N 156 CYS OXT HXT sing N N 157 G OP3 P sing N N 158 G OP3 HOP3 sing N N 159 G P OP1 doub N N 160 G P OP2 sing N N 161 G P "O5'" sing N N 162 G OP2 HOP2 sing N N 163 G "O5'" "C5'" sing N N 164 G "C5'" "C4'" sing N N 165 G "C5'" "H5'" sing N N 166 G "C5'" "H5''" sing N N 167 G "C4'" "O4'" sing N N 168 G "C4'" "C3'" sing N N 169 G "C4'" "H4'" sing N N 170 G "O4'" "C1'" sing N N 171 G "C3'" "O3'" sing N N 172 G "C3'" "C2'" sing N N 173 G "C3'" "H3'" sing N N 174 G "O3'" "HO3'" sing N N 175 G "C2'" "O2'" sing N N 176 G "C2'" "C1'" sing N N 177 G "C2'" "H2'" sing N N 178 G "O2'" "HO2'" sing N N 179 G "C1'" N9 sing N N 180 G "C1'" "H1'" sing N N 181 G N9 C8 sing Y N 182 G N9 C4 sing Y N 183 G C8 N7 doub Y N 184 G C8 H8 sing N N 185 G N7 C5 sing Y N 186 G C5 C6 sing N N 187 G C5 C4 doub Y N 188 G C6 O6 doub N N 189 G C6 N1 sing N N 190 G N1 C2 sing N N 191 G N1 H1 sing N N 192 G C2 N2 sing N N 193 G C2 N3 doub N N 194 G N2 H21 sing N N 195 G N2 H22 sing N N 196 G N3 C4 sing N N 197 GLN N CA sing N N 198 GLN N H sing N N 199 GLN N H2 sing N N 200 GLN CA C sing N N 201 GLN CA CB sing N N 202 GLN CA HA sing N N 203 GLN C O doub N N 204 GLN C OXT sing N N 205 GLN CB CG sing N N 206 GLN CB HB2 sing N N 207 GLN CB HB3 sing N N 208 GLN CG CD sing N N 209 GLN CG HG2 sing N N 210 GLN CG HG3 sing N N 211 GLN CD OE1 doub N N 212 GLN CD NE2 sing N N 213 GLN NE2 HE21 sing N N 214 GLN NE2 HE22 sing N N 215 GLN OXT HXT sing N N 216 GLU N CA sing N N 217 GLU N H sing N N 218 GLU N H2 sing N N 219 GLU CA C sing N N 220 GLU CA CB sing N N 221 GLU CA HA sing N N 222 GLU C O doub N N 223 GLU C OXT sing N N 224 GLU CB CG sing N N 225 GLU CB HB2 sing N N 226 GLU CB HB3 sing N N 227 GLU CG CD sing N N 228 GLU CG HG2 sing N N 229 GLU CG HG3 sing N N 230 GLU CD OE1 doub N N 231 GLU CD OE2 sing N N 232 GLU OE2 HE2 sing N N 233 GLU OXT HXT sing N N 234 GLY N CA sing N N 235 GLY N H sing N N 236 GLY N H2 sing N N 237 GLY CA C sing N N 238 GLY CA HA2 sing N N 239 GLY CA HA3 sing N N 240 GLY C O doub N N 241 GLY C OXT sing N N 242 GLY OXT HXT sing N N 243 HIS N CA sing N N 244 HIS N H sing N N 245 HIS N H2 sing N N 246 HIS CA C sing N N 247 HIS CA CB sing N N 248 HIS CA HA sing N N 249 HIS C O doub N N 250 HIS C OXT sing N N 251 HIS CB CG sing N N 252 HIS CB HB2 sing N N 253 HIS CB HB3 sing N N 254 HIS CG ND1 sing Y N 255 HIS CG CD2 doub Y N 256 HIS ND1 CE1 doub Y N 257 HIS ND1 HD1 sing N N 258 HIS CD2 NE2 sing Y N 259 HIS CD2 HD2 sing N N 260 HIS CE1 NE2 sing Y N 261 HIS CE1 HE1 sing N N 262 HIS NE2 HE2 sing N N 263 HIS OXT HXT sing N N 264 HOH O H1 sing N N 265 HOH O H2 sing N N 266 ILE N CA sing N N 267 ILE N H sing N N 268 ILE N H2 sing N N 269 ILE CA C sing N N 270 ILE CA CB sing N N 271 ILE CA HA sing N N 272 ILE C O doub N N 273 ILE C OXT sing N N 274 ILE CB CG1 sing N N 275 ILE CB CG2 sing N N 276 ILE CB HB sing N N 277 ILE CG1 CD1 sing N N 278 ILE CG1 HG12 sing N N 279 ILE CG1 HG13 sing N N 280 ILE CG2 HG21 sing N N 281 ILE CG2 HG22 sing N N 282 ILE CG2 HG23 sing N N 283 ILE CD1 HD11 sing N N 284 ILE CD1 HD12 sing N N 285 ILE CD1 HD13 sing N N 286 ILE OXT HXT sing N N 287 LEU N CA sing N N 288 LEU N H sing N N 289 LEU N H2 sing N N 290 LEU CA C sing N N 291 LEU CA CB sing N N 292 LEU CA HA sing N N 293 LEU C O doub N N 294 LEU C OXT sing N N 295 LEU CB CG sing N N 296 LEU CB HB2 sing N N 297 LEU CB HB3 sing N N 298 LEU CG CD1 sing N N 299 LEU CG CD2 sing N N 300 LEU CG HG sing N N 301 LEU CD1 HD11 sing N N 302 LEU CD1 HD12 sing N N 303 LEU CD1 HD13 sing N N 304 LEU CD2 HD21 sing N N 305 LEU CD2 HD22 sing N N 306 LEU CD2 HD23 sing N N 307 LEU OXT HXT sing N N 308 LYS N CA sing N N 309 LYS N H sing N N 310 LYS N H2 sing N N 311 LYS CA C sing N N 312 LYS CA CB sing N N 313 LYS CA HA sing N N 314 LYS C O doub N N 315 LYS C OXT sing N N 316 LYS CB CG sing N N 317 LYS CB HB2 sing N N 318 LYS CB HB3 sing N N 319 LYS CG CD sing N N 320 LYS CG HG2 sing N N 321 LYS CG HG3 sing N N 322 LYS CD CE sing N N 323 LYS CD HD2 sing N N 324 LYS CD HD3 sing N N 325 LYS CE NZ sing N N 326 LYS CE HE2 sing N N 327 LYS CE HE3 sing N N 328 LYS NZ HZ1 sing N N 329 LYS NZ HZ2 sing N N 330 LYS NZ HZ3 sing N N 331 LYS OXT HXT sing N N 332 MET N CA sing N N 333 MET N H sing N N 334 MET N H2 sing N N 335 MET CA C sing N N 336 MET CA CB sing N N 337 MET CA HA sing N N 338 MET C O doub N N 339 MET C OXT sing N N 340 MET CB CG sing N N 341 MET CB HB2 sing N N 342 MET CB HB3 sing N N 343 MET CG SD sing N N 344 MET CG HG2 sing N N 345 MET CG HG3 sing N N 346 MET SD CE sing N N 347 MET CE HE1 sing N N 348 MET CE HE2 sing N N 349 MET CE HE3 sing N N 350 MET OXT HXT sing N N 351 PHE N CA sing N N 352 PHE N H sing N N 353 PHE N H2 sing N N 354 PHE CA C sing N N 355 PHE CA CB sing N N 356 PHE CA HA sing N N 357 PHE C O doub N N 358 PHE C OXT sing N N 359 PHE CB CG sing N N 360 PHE CB HB2 sing N N 361 PHE CB HB3 sing N N 362 PHE CG CD1 doub Y N 363 PHE CG CD2 sing Y N 364 PHE CD1 CE1 sing Y N 365 PHE CD1 HD1 sing N N 366 PHE CD2 CE2 doub Y N 367 PHE CD2 HD2 sing N N 368 PHE CE1 CZ doub Y N 369 PHE CE1 HE1 sing N N 370 PHE CE2 CZ sing Y N 371 PHE CE2 HE2 sing N N 372 PHE CZ HZ sing N N 373 PHE OXT HXT sing N N 374 PRO N CA sing N N 375 PRO N CD sing N N 376 PRO N H sing N N 377 PRO CA C sing N N 378 PRO CA CB sing N N 379 PRO CA HA sing N N 380 PRO C O doub N N 381 PRO C OXT sing N N 382 PRO CB CG sing N N 383 PRO CB HB2 sing N N 384 PRO CB HB3 sing N N 385 PRO CG CD sing N N 386 PRO CG HG2 sing N N 387 PRO CG HG3 sing N N 388 PRO CD HD2 sing N N 389 PRO CD HD3 sing N N 390 PRO OXT HXT sing N N 391 SER N CA sing N N 392 SER N H sing N N 393 SER N H2 sing N N 394 SER CA C sing N N 395 SER CA CB sing N N 396 SER CA HA sing N N 397 SER C O doub N N 398 SER C OXT sing N N 399 SER CB OG sing N N 400 SER CB HB2 sing N N 401 SER CB HB3 sing N N 402 SER OG HG sing N N 403 SER OXT HXT sing N N 404 SO4 S O1 doub N N 405 SO4 S O2 doub N N 406 SO4 S O3 sing N N 407 SO4 S O4 sing N N 408 THR N CA sing N N 409 THR N H sing N N 410 THR N H2 sing N N 411 THR CA C sing N N 412 THR CA CB sing N N 413 THR CA HA sing N N 414 THR C O doub N N 415 THR C OXT sing N N 416 THR CB OG1 sing N N 417 THR CB CG2 sing N N 418 THR CB HB sing N N 419 THR OG1 HG1 sing N N 420 THR CG2 HG21 sing N N 421 THR CG2 HG22 sing N N 422 THR CG2 HG23 sing N N 423 THR OXT HXT sing N N 424 TRP N CA sing N N 425 TRP N H sing N N 426 TRP N H2 sing N N 427 TRP CA C sing N N 428 TRP CA CB sing N N 429 TRP CA HA sing N N 430 TRP C O doub N N 431 TRP C OXT sing N N 432 TRP CB CG sing N N 433 TRP CB HB2 sing N N 434 TRP CB HB3 sing N N 435 TRP CG CD1 doub Y N 436 TRP CG CD2 sing Y N 437 TRP CD1 NE1 sing Y N 438 TRP CD1 HD1 sing N N 439 TRP CD2 CE2 doub Y N 440 TRP CD2 CE3 sing Y N 441 TRP NE1 CE2 sing Y N 442 TRP NE1 HE1 sing N N 443 TRP CE2 CZ2 sing Y N 444 TRP CE3 CZ3 doub Y N 445 TRP CE3 HE3 sing N N 446 TRP CZ2 CH2 doub Y N 447 TRP CZ2 HZ2 sing N N 448 TRP CZ3 CH2 sing Y N 449 TRP CZ3 HZ3 sing N N 450 TRP CH2 HH2 sing N N 451 TRP OXT HXT sing N N 452 TYR N CA sing N N 453 TYR N H sing N N 454 TYR N H2 sing N N 455 TYR CA C sing N N 456 TYR CA CB sing N N 457 TYR CA HA sing N N 458 TYR C O doub N N 459 TYR C OXT sing N N 460 TYR CB CG sing N N 461 TYR CB HB2 sing N N 462 TYR CB HB3 sing N N 463 TYR CG CD1 doub Y N 464 TYR CG CD2 sing Y N 465 TYR CD1 CE1 sing Y N 466 TYR CD1 HD1 sing N N 467 TYR CD2 CE2 doub Y N 468 TYR CD2 HD2 sing N N 469 TYR CE1 CZ doub Y N 470 TYR CE1 HE1 sing N N 471 TYR CE2 CZ sing Y N 472 TYR CE2 HE2 sing N N 473 TYR CZ OH sing N N 474 TYR OH HH sing N N 475 TYR OXT HXT sing N N 476 U OP3 P sing N N 477 U OP3 HOP3 sing N N 478 U P OP1 doub N N 479 U P OP2 sing N N 480 U P "O5'" sing N N 481 U OP2 HOP2 sing N N 482 U "O5'" "C5'" sing N N 483 U "C5'" "C4'" sing N N 484 U "C5'" "H5'" sing N N 485 U "C5'" "H5''" sing N N 486 U "C4'" "O4'" sing N N 487 U "C4'" "C3'" sing N N 488 U "C4'" "H4'" sing N N 489 U "O4'" "C1'" sing N N 490 U "C3'" "O3'" sing N N 491 U "C3'" "C2'" sing N N 492 U "C3'" "H3'" sing N N 493 U "O3'" "HO3'" sing N N 494 U "C2'" "O2'" sing N N 495 U "C2'" "C1'" sing N N 496 U "C2'" "H2'" sing N N 497 U "O2'" "HO2'" sing N N 498 U "C1'" N1 sing N N 499 U "C1'" "H1'" sing N N 500 U N1 C2 sing N N 501 U N1 C6 sing N N 502 U C2 O2 doub N N 503 U C2 N3 sing N N 504 U N3 C4 sing N N 505 U N3 H3 sing N N 506 U C4 O4 doub N N 507 U C4 C5 sing N N 508 U C5 C6 doub N N 509 U C5 H5 sing N N 510 U C6 H6 sing N N 511 VAL N CA sing N N 512 VAL N H sing N N 513 VAL N H2 sing N N 514 VAL CA C sing N N 515 VAL CA CB sing N N 516 VAL CA HA sing N N 517 VAL C O doub N N 518 VAL C OXT sing N N 519 VAL CB CG1 sing N N 520 VAL CB CG2 sing N N 521 VAL CB HB sing N N 522 VAL CG1 HG11 sing N N 523 VAL CG1 HG12 sing N N 524 VAL CG1 HG13 sing N N 525 VAL CG2 HG21 sing N N 526 VAL CG2 HG22 sing N N 527 VAL CG2 HG23 sing N N 528 VAL OXT HXT sing N N 529 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4J39 'double helix' 4J39 'a-form double helix' 4J39 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B C 1 1_555 B G 19 4_555 0.020 -0.129 -0.238 1.961 -9.524 -3.726 1 B_C1:G19_B B 1 ? B 19 ? 19 1 1 B A 2 1_555 B U 18 4_555 0.084 -0.129 0.000 -1.304 -8.789 3.200 2 B_A2:U18_B B 2 ? B 18 ? 20 1 1 B G 3 1_555 B C 17 4_555 -0.680 -0.144 -0.018 -2.484 -9.341 1.714 3 B_G3:C17_B B 3 ? B 17 ? 19 1 1 B C 4 1_555 B G 16 4_555 0.452 -0.283 -0.032 -2.711 -10.632 0.860 4 B_C4:G16_B B 4 ? B 16 ? 19 1 1 B A 5 1_555 B U 15 4_555 0.046 0.143 0.178 -1.445 -16.730 8.186 5 B_A5:U15_B B 5 ? B 15 ? 20 1 1 B G 6 1_555 B C 14 4_555 -0.375 -0.152 -0.203 -4.618 -13.655 3.080 6 B_G6:C14_B B 6 ? B 14 ? 19 1 1 B C 7 1_555 B G 13 4_555 0.271 -0.091 0.114 -6.326 -11.030 0.799 7 B_C7:G13_B B 7 ? B 13 ? 19 1 1 B A 8 1_555 B U 12 4_555 0.296 -0.105 0.221 -4.639 -9.349 1.724 8 B_A8:U12_B B 8 ? B 12 ? 20 1 1 B G 9 1_555 B C 11 4_555 -0.135 -0.208 0.116 -1.055 -11.886 -0.210 9 B_G9:C11_B B 9 ? B 11 ? 19 1 1 B C 11 1_555 B G 9 4_555 0.135 -0.208 0.116 1.055 -11.886 -0.210 10 B_C11:G9_B B 11 ? B 9 ? 19 1 1 B U 12 1_555 B A 8 4_555 -0.296 -0.105 0.221 4.639 -9.349 1.724 11 B_U12:A8_B B 12 ? B 8 ? 20 1 1 B G 13 1_555 B C 7 4_555 -0.271 -0.091 0.114 6.326 -11.030 0.799 12 B_G13:C7_B B 13 ? B 7 ? 19 1 1 B C 14 1_555 B G 6 4_555 0.375 -0.152 -0.203 4.618 -13.656 3.080 13 B_C14:G6_B B 14 ? B 6 ? 19 1 1 B U 15 1_555 B A 5 4_555 -0.046 0.143 0.178 1.445 -16.730 8.186 14 B_U15:A5_B B 15 ? B 5 ? 20 1 1 B G 16 1_555 B C 4 4_555 -0.452 -0.283 -0.032 2.711 -10.632 0.860 15 B_G16:C4_B B 16 ? B 4 ? 19 1 1 B C 17 1_555 B G 3 4_555 0.680 -0.144 -0.018 2.484 -9.341 1.714 16 B_C17:G3_B B 17 ? B 3 ? 19 1 1 B U 18 1_555 B A 2 4_555 -0.084 -0.129 0.000 1.304 -8.789 3.200 17 B_U18:A2_B B 18 ? B 2 ? 20 1 1 B G 19 1_555 B C 1 4_555 -0.020 -0.129 -0.238 -1.961 -9.524 -3.726 18 B_G19:C1_B B 19 ? B 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B C 1 1_555 B G 19 4_555 B A 2 1_555 B U 18 4_555 0.427 -1.678 3.325 -2.770 10.116 31.295 -4.566 -1.193 2.624 18.127 4.964 32.964 1 BB_C1A2:U18G19_BB B 1 ? B 19 ? B 2 ? B 18 ? 1 B A 2 1_555 B U 18 4_555 B G 3 1_555 B C 17 4_555 -0.121 -1.842 3.288 -0.334 6.223 26.170 -5.466 0.180 2.784 13.500 0.724 26.890 2 BB_A2G3:C17U18_BB B 2 ? B 18 ? B 3 ? B 17 ? 1 B G 3 1_555 B C 17 4_555 B C 4 1_555 B G 16 4_555 -0.079 -2.042 3.307 0.693 2.886 35.193 -3.787 0.230 3.133 4.762 -1.143 35.314 3 BB_G3C4:G16C17_BB B 3 ? B 17 ? B 4 ? B 16 ? 1 B C 4 1_555 B G 16 4_555 B A 5 1_555 B U 15 4_555 0.333 -1.887 3.104 1.088 10.540 24.119 -6.505 -0.488 2.118 23.807 -2.458 26.312 4 BB_C4A5:U15G16_BB B 4 ? B 16 ? B 5 ? B 15 ? 1 B A 5 1_555 B U 15 4_555 B G 6 1_555 B C 14 4_555 -0.353 -1.495 3.354 0.818 10.010 30.499 -4.425 0.779 2.729 18.411 -1.505 32.073 5 BB_A5G6:C14U15_BB B 5 ? B 15 ? B 6 ? B 14 ? 1 B G 6 1_555 B C 14 4_555 B C 7 1_555 B G 13 4_555 0.426 -1.640 3.341 0.089 5.949 32.331 -3.895 -0.738 3.001 10.571 -0.158 32.859 6 BB_G6C7:G13C14_BB B 6 ? B 14 ? B 7 ? B 13 ? 1 B C 7 1_555 B G 13 4_555 B A 8 1_555 B U 12 4_555 0.547 -1.700 3.077 3.620 8.758 30.200 -4.546 -0.414 2.543 16.312 -6.741 31.619 7 BB_C7A8:U12G13_BB B 7 ? B 13 ? B 8 ? B 12 ? 1 B A 8 1_555 B U 12 4_555 B G 9 1_555 B C 11 4_555 0.695 -1.902 3.142 4.362 7.377 25.454 -5.807 -0.486 2.580 16.168 -9.561 26.836 8 BB_A8G9:C11U12_BB B 8 ? B 12 ? B 9 ? B 11 ? 1 B G 9 1_555 B C 11 4_555 B C 11 1_555 B G 9 4_555 0.000 -3.170 6.322 0.000 8.138 70.120 -3.282 0.000 5.971 7.060 0.000 70.531 9 BB_G9C11:G9C11_BB B 9 ? B 11 ? B 11 ? B 9 ? 1 B C 11 1_555 B G 9 4_555 B U 12 1_555 B A 8 4_555 -0.695 -1.902 3.142 -4.362 7.377 25.454 -5.807 0.486 2.580 16.168 9.561 26.836 10 BB_C11U12:A8G9_BB B 11 ? B 9 ? B 12 ? B 8 ? 1 B U 12 1_555 B A 8 4_555 B G 13 1_555 B C 7 4_555 -0.547 -1.700 3.077 -3.620 8.758 30.200 -4.546 0.414 2.543 16.312 6.741 31.619 11 BB_U12G13:C7A8_BB B 12 ? B 8 ? B 13 ? B 7 ? 1 B G 13 1_555 B C 7 4_555 B C 14 1_555 B G 6 4_555 -0.426 -1.640 3.341 -0.089 5.949 32.331 -3.895 0.738 3.001 10.571 0.158 32.859 12 BB_G13C14:G6C7_BB B 13 ? B 7 ? B 14 ? B 6 ? 1 B C 14 1_555 B G 6 4_555 B U 15 1_555 B A 5 4_555 0.353 -1.495 3.354 -0.818 10.010 30.499 -4.425 -0.779 2.729 18.411 1.505 32.073 13 BB_C14U15:A5G6_BB B 14 ? B 6 ? B 15 ? B 5 ? 1 B U 15 1_555 B A 5 4_555 B G 16 1_555 B C 4 4_555 -0.333 -1.887 3.104 -1.088 10.540 24.119 -6.505 0.488 2.118 23.807 2.458 26.312 14 BB_U15G16:C4A5_BB B 15 ? B 5 ? B 16 ? B 4 ? 1 B G 16 1_555 B C 4 4_555 B C 17 1_555 B G 3 4_555 0.079 -2.042 3.307 -0.693 2.886 35.193 -3.787 -0.230 3.133 4.762 1.143 35.314 15 BB_G16C17:G3C4_BB B 16 ? B 4 ? B 17 ? B 3 ? 1 B C 17 1_555 B G 3 4_555 B U 18 1_555 B A 2 4_555 0.121 -1.842 3.288 0.334 6.223 26.170 -5.466 -0.180 2.784 13.500 -0.724 26.890 16 BB_C17U18:A2G3_BB B 17 ? B 3 ? B 18 ? B 2 ? 1 B U 18 1_555 B A 2 4_555 B G 19 1_555 B C 1 4_555 -0.427 -1.678 3.325 2.770 10.116 31.295 -4.566 1.193 2.624 18.127 -4.964 32.964 17 BB_U18G19:C1A2_BB B 18 ? B 2 ? B 19 ? B 1 ? # _atom_sites.entry_id 4J39 _atom_sites.fract_transf_matrix[1][1] 0.011036 _atom_sites.fract_transf_matrix[1][2] 0.006372 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012743 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006733 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_