data_4KYW # _entry.id 4KYW # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4KYW pdb_00004kyw 10.2210/pdb4kyw/pdb NDB NA2545 ? ? RCSB RCSB079968 ? ? WWPDB D_1000079968 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 4ESJ _pdbx_database_related.details 'RESTRICTION ENDONUCLEASE DPNI IN COMPLEX WITH TARGET DNA' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4KYW _pdbx_database_status.recvd_initial_deposition_date 2013-05-29 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Mierzejewska, K.' 1 'Siwek, W.' 2 'Czapinska, H.' 3 'Skowronek, K.' 4 'Bujnicki, J.M.' 5 'Bochtler, M.' 6 # _citation.id primary _citation.title 'Structural basis of the methylation specificity of R.DpnI.' _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 42 _citation.page_first 8745 _citation.page_last 8754 _citation.year 2014 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24966351 _citation.pdbx_database_id_DOI 10.1093/nar/gku546 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Mierzejewska, K.' 1 ? primary 'Siwek, W.' 2 ? primary 'Czapinska, H.' 3 ? primary 'Kaus-Drobek, M.' 4 ? primary 'Radlinska, M.' 5 ? primary 'Skowronek, K.' 6 ? primary 'Bujnicki, J.M.' 7 ? primary 'Dadlez, M.' 8 ? primary 'Bochtler, M.' 9 ? # _cell.entry_id 4KYW _cell.length_a 95.700 _cell.length_b 101.050 _cell.length_c 114.850 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4KYW _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Type-2 restriction enzyme DpnI' 30078.355 1 3.1.21.4 ? ? ? 2 polymer syn "5'-(*DC*DTP*DGP*DGP*6MAP*DTP*DCP*DCP*DAP*DG)-3'" 3059.031 4 ? ? ? ? 3 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? 4 non-polymer syn 'CALCIUM ION' 40.078 1 ? ? ? ? 5 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 6 water nat water 18.015 94 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'R.DpnI, Endonuclease DpnI, Type II restriction enzyme DpnI' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GPHMELHFNLELVETYKSNSQKARILTEDWVYRQSYCPNCGNNPLNHFENNRPVADFYCNHCSEEFELKSKKGNFSSTIN DGAYATMMKRVQADNNPNFFFLTYTKNFEVNNFLVLPKQFVTPKSIIQRKPLAPTANRAGWIGCNIDLSQVPSKGRIFLV QDGQVRDPEKVTKEFKQGLFLRKSSLSSRGWTIEILNCIDKIEGSEFTLEDMYRFESDLKNIFVKNNHIKEKIRQQLQIL RDKEIIEFKGRGKYRKL ; ;GPHMELHFNLELVETYKSNSQKARILTEDWVYRQSYCPNCGNNPLNHFENNRPVADFYCNHCSEEFELKSKKGNFSSTIN DGAYATMMKRVQADNNPNFFFLTYTKNFEVNNFLVLPKQFVTPKSIIQRKPLAPTANRAGWIGCNIDLSQVPSKGRIFLV QDGQVRDPEKVTKEFKQGLFLRKSSLSSRGWTIEILNCIDKIEGSEFTLEDMYRFESDLKNIFVKNNHIKEKIRQQLQIL RDKEIIEFKGRGKYRKL ; A ? 2 polydeoxyribonucleotide no yes '(DC)(DT)(DG)(DG)(6MA)(DT)(DC)(DC)(DA)(DG)' CTGGATCCAG C,D,E,F ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 HIS n 1 4 MET n 1 5 GLU n 1 6 LEU n 1 7 HIS n 1 8 PHE n 1 9 ASN n 1 10 LEU n 1 11 GLU n 1 12 LEU n 1 13 VAL n 1 14 GLU n 1 15 THR n 1 16 TYR n 1 17 LYS n 1 18 SER n 1 19 ASN n 1 20 SER n 1 21 GLN n 1 22 LYS n 1 23 ALA n 1 24 ARG n 1 25 ILE n 1 26 LEU n 1 27 THR n 1 28 GLU n 1 29 ASP n 1 30 TRP n 1 31 VAL n 1 32 TYR n 1 33 ARG n 1 34 GLN n 1 35 SER n 1 36 TYR n 1 37 CYS n 1 38 PRO n 1 39 ASN n 1 40 CYS n 1 41 GLY n 1 42 ASN n 1 43 ASN n 1 44 PRO n 1 45 LEU n 1 46 ASN n 1 47 HIS n 1 48 PHE n 1 49 GLU n 1 50 ASN n 1 51 ASN n 1 52 ARG n 1 53 PRO n 1 54 VAL n 1 55 ALA n 1 56 ASP n 1 57 PHE n 1 58 TYR n 1 59 CYS n 1 60 ASN n 1 61 HIS n 1 62 CYS n 1 63 SER n 1 64 GLU n 1 65 GLU n 1 66 PHE n 1 67 GLU n 1 68 LEU n 1 69 LYS n 1 70 SER n 1 71 LYS n 1 72 LYS n 1 73 GLY n 1 74 ASN n 1 75 PHE n 1 76 SER n 1 77 SER n 1 78 THR n 1 79 ILE n 1 80 ASN n 1 81 ASP n 1 82 GLY n 1 83 ALA n 1 84 TYR n 1 85 ALA n 1 86 THR n 1 87 MET n 1 88 MET n 1 89 LYS n 1 90 ARG n 1 91 VAL n 1 92 GLN n 1 93 ALA n 1 94 ASP n 1 95 ASN n 1 96 ASN n 1 97 PRO n 1 98 ASN n 1 99 PHE n 1 100 PHE n 1 101 PHE n 1 102 LEU n 1 103 THR n 1 104 TYR n 1 105 THR n 1 106 LYS n 1 107 ASN n 1 108 PHE n 1 109 GLU n 1 110 VAL n 1 111 ASN n 1 112 ASN n 1 113 PHE n 1 114 LEU n 1 115 VAL n 1 116 LEU n 1 117 PRO n 1 118 LYS n 1 119 GLN n 1 120 PHE n 1 121 VAL n 1 122 THR n 1 123 PRO n 1 124 LYS n 1 125 SER n 1 126 ILE n 1 127 ILE n 1 128 GLN n 1 129 ARG n 1 130 LYS n 1 131 PRO n 1 132 LEU n 1 133 ALA n 1 134 PRO n 1 135 THR n 1 136 ALA n 1 137 ASN n 1 138 ARG n 1 139 ALA n 1 140 GLY n 1 141 TRP n 1 142 ILE n 1 143 GLY n 1 144 CYS n 1 145 ASN n 1 146 ILE n 1 147 ASP n 1 148 LEU n 1 149 SER n 1 150 GLN n 1 151 VAL n 1 152 PRO n 1 153 SER n 1 154 LYS n 1 155 GLY n 1 156 ARG n 1 157 ILE n 1 158 PHE n 1 159 LEU n 1 160 VAL n 1 161 GLN n 1 162 ASP n 1 163 GLY n 1 164 GLN n 1 165 VAL n 1 166 ARG n 1 167 ASP n 1 168 PRO n 1 169 GLU n 1 170 LYS n 1 171 VAL n 1 172 THR n 1 173 LYS n 1 174 GLU n 1 175 PHE n 1 176 LYS n 1 177 GLN n 1 178 GLY n 1 179 LEU n 1 180 PHE n 1 181 LEU n 1 182 ARG n 1 183 LYS n 1 184 SER n 1 185 SER n 1 186 LEU n 1 187 SER n 1 188 SER n 1 189 ARG n 1 190 GLY n 1 191 TRP n 1 192 THR n 1 193 ILE n 1 194 GLU n 1 195 ILE n 1 196 LEU n 1 197 ASN n 1 198 CYS n 1 199 ILE n 1 200 ASP n 1 201 LYS n 1 202 ILE n 1 203 GLU n 1 204 GLY n 1 205 SER n 1 206 GLU n 1 207 PHE n 1 208 THR n 1 209 LEU n 1 210 GLU n 1 211 ASP n 1 212 MET n 1 213 TYR n 1 214 ARG n 1 215 PHE n 1 216 GLU n 1 217 SER n 1 218 ASP n 1 219 LEU n 1 220 LYS n 1 221 ASN n 1 222 ILE n 1 223 PHE n 1 224 VAL n 1 225 LYS n 1 226 ASN n 1 227 ASN n 1 228 HIS n 1 229 ILE n 1 230 LYS n 1 231 GLU n 1 232 LYS n 1 233 ILE n 1 234 ARG n 1 235 GLN n 1 236 GLN n 1 237 LEU n 1 238 GLN n 1 239 ILE n 1 240 LEU n 1 241 ARG n 1 242 ASP n 1 243 LYS n 1 244 GLU n 1 245 ILE n 1 246 ILE n 1 247 GLU n 1 248 PHE n 1 249 LYS n 1 250 GLY n 1 251 ARG n 1 252 GLY n 1 253 LYS n 1 254 TYR n 1 255 ARG n 1 256 LYS n 1 257 LEU n 2 1 DC n 2 2 DT n 2 3 DG n 2 4 DG n 2 5 6MA n 2 6 DT n 2 7 DC n 2 8 DC n 2 9 DA n 2 10 DG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'dpnC, spr1665, SP_1850' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain TIGR4 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Streptococcus pneumoniae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 170187 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ER2925 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET28 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'SYNTHETIC OLIGONUCLEOTIDE' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP T2D1_STRPN P0A459 1 ;MELHFNLELVETYKSNSQKARILTEDWVYRQSYCPNCGNNPLNHFENNRPVADFYCNHCSEEFELKSKKGNFSSTINDGA YATMMKRVQADNNPNFFFLTYTKNFEVNNFLVLPKQFVTPKSIIQRKPLAPTARRAGWIGCNIDLSQVPSKGRIFLVQDG QVRDPEKVTKEFKQGLFLRKSSLSSRGWTIEILNCIDKIEGSEFTLEDMYRFESDLKNIFVKNNHIKEKIRQQLQILRDK EIIEFKGRGKYRKL ; 1 ? 2 PDB 4KYW 4KYW 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4KYW A 4 ? 257 ? P0A459 1 ? 254 ? 1 254 2 2 4KYW C 1 ? 10 ? 4KYW 1 ? 10 ? 1 10 3 2 4KYW D 1 ? 10 ? 4KYW 1 ? 10 ? 1 10 4 2 4KYW E 1 ? 10 ? 4KYW 1 ? 10 ? 1 10 5 2 4KYW F 1 ? 10 ? 4KYW 1 ? 10 ? 1 10 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4KYW GLY A 1 ? UNP P0A459 ? ? 'expression tag' -2 1 1 4KYW PRO A 2 ? UNP P0A459 ? ? 'expression tag' -1 2 1 4KYW HIS A 3 ? UNP P0A459 ? ? 'expression tag' 0 3 1 4KYW ASN A 137 ? UNP P0A459 ARG 134 'engineered mutation' 134 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 6MA 'DNA linking' n "N6-METHYL-DEOXY-ADENOSINE-5'-MONOPHOSPHATE" ? 'C11 H16 N5 O6 P' 345.248 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.entry_id 4KYW _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.28 _exptl_crystal.density_percent_sol 62.51 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details ;160 mM CALCIUM ACETATE, 80 mM SODIUM CACODYLATE PH 6.5, 14.4% W/V PEG 8000, 20% V/V GLYCEROL, 10 mM SPERMIDINE., VAPOR DIFFUSION, SITTING DROP, temperature 277K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'PSI PILATUS 6M' _diffrn_detector.pdbx_collection_date 2012-10-02 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.23953 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'PETRA III, EMBL c/o DESY BEAMLINE P14 (MX2)' _diffrn_source.pdbx_synchrotron_site 'PETRA III, EMBL c/o DESY' _diffrn_source.pdbx_synchrotron_beamline 'P14 (MX2)' _diffrn_source.pdbx_wavelength 1.23953 _diffrn_source.pdbx_wavelength_list 1.23953 # _reflns.entry_id 4KYW _reflns.observed_criterion_sigma_I . _reflns.observed_criterion_sigma_F . _reflns.d_resolution_low 50.000 _reflns.d_resolution_high 2.35 _reflns.number_obs 23502 _reflns.number_all 23502 _reflns.percent_possible_obs 99.7 _reflns.pdbx_Rmerge_I_obs 0.049 _reflns.pdbx_Rsym_value 0.049 _reflns.pdbx_netI_over_sigmaI 20.51 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.37 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.35 _reflns_shell.d_res_low 2.41 _reflns_shell.percent_possible_all 99.9 _reflns_shell.Rmerge_I_obs 0.44 _reflns_shell.pdbx_Rsym_value 0.44 _reflns_shell.meanI_over_sigI_obs 4.14 _reflns_shell.pdbx_redundancy 6.68 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1720 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4KYW _refine.ls_number_reflns_obs 23477 _refine.ls_number_reflns_all 23477 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 46.23 _refine.ls_d_res_high 2.35 _refine.ls_percent_reflns_obs 99.72 _refine.ls_R_factor_obs 0.20216 _refine.ls_R_factor_all 0.20216 _refine.ls_R_factor_R_work 0.20125 _refine.ls_R_factor_R_free 0.21904 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 1204 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.954 _refine.correlation_coeff_Fo_to_Fc_free 0.949 _refine.B_iso_mean 43.385 _refine.aniso_B[1][1] -0.77 _refine.aniso_B[2][2] -0.42 _refine.aniso_B[3][3] 1.19 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;AT THE FLANK OF THE RECOGNITION SEQUENCE SHALLOW INTERCALATION OF AN UNKNOWN MOLECULE IS SUGGESTED BY ELECTRON DENSITY MAPS. WE HAVE NOT BEEN ABLE TO DISTINGUISH WHETHER THIS DENSITY SHOULD BE ACCOUNTED FOR BY A SECOND CONFORMER OF ASN77 OR EITHER B-MERCAPTOETHANOL, ACETATE OR AZIDE FROM THE BUFFER. THE DESIGNATION OF ONE OF THE IONS AS NA+ IS TENTATIVE ONLY. PROGRAM CNS HAS BEEN USED FOR DNA REFINEMENT. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. TLS REFINEMENT HAS BEEN USED. ; _refine.pdbx_starting_model 'PDB ENTRY 4ESJ' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.263 _refine.pdbx_overall_ESU_R_Free 0.193 _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2096 _refine_hist.pdbx_number_atoms_nucleic_acid 812 _refine_hist.pdbx_number_atoms_ligand 3 _refine_hist.number_atoms_solvent 94 _refine_hist.number_atoms_total 3005 _refine_hist.d_res_high 2.35 _refine_hist.d_res_low 46.23 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.011 0.022 ? 3070 ? 'X-RAY DIFFRACTION' r_bond_other_d 0.000 0.020 ? 1910 ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.340 2.288 ? 4302 ? 'X-RAY DIFFRACTION' r_angle_other_deg 3.804 3.000 ? 4674 ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 6.217 5.000 ? 256 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 37.887 24.435 ? 115 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 15.495 15.000 ? 405 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 19.589 15.000 ? 15 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.083 0.200 ? 461 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.012 0.020 ? 2828 ? 'X-RAY DIFFRACTION' r_gen_planes_other 0.010 0.020 ? 540 ? 'X-RAY DIFFRACTION' r_nbd_refined 0.197 0.200 ? 539 ? 'X-RAY DIFFRACTION' r_nbd_other 0.273 0.200 ? 2004 ? 'X-RAY DIFFRACTION' r_nbtor_refined 0.201 0.200 ? 1368 ? 'X-RAY DIFFRACTION' r_nbtor_other 0.109 0.200 ? 1332 ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_refined 0.189 0.200 ? 135 ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_other 0.071 0.200 ? 1 ? 'X-RAY DIFFRACTION' r_metal_ion_refined 0.218 0.200 ? 10 ? 'X-RAY DIFFRACTION' r_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_refined 0.140 0.200 ? 18 ? 'X-RAY DIFFRACTION' r_symmetry_vdw_other 0.222 0.200 ? 18 ? 'X-RAY DIFFRACTION' r_symmetry_hbond_refined 0.212 0.200 ? 5 ? 'X-RAY DIFFRACTION' r_symmetry_hbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcbond_it 0.675 1.500 ? 1279 ? 'X-RAY DIFFRACTION' r_mcbond_other 0.000 1.500 ? 513 ? 'X-RAY DIFFRACTION' r_mcangle_it 1.282 2.000 ? 2076 ? 'X-RAY DIFFRACTION' r_scbond_it 1.794 3.000 ? 1791 ? 'X-RAY DIFFRACTION' r_scangle_it 2.848 4.500 ? 2226 ? 'X-RAY DIFFRACTION' r_rigid_bond_restr ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_free ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_bonded ? ? ? ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.350 _refine_ls_shell.d_res_low 2.411 _refine_ls_shell.number_reflns_R_work 1626 _refine_ls_shell.R_factor_R_work 0.309 _refine_ls_shell.percent_reflns_obs 99.83 _refine_ls_shell.R_factor_R_free 0.319 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 90 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 1716 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4KYW _struct.title 'Restriction endonuclease DPNI in complex with two DNA molecules' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4KYW _struct_keywords.pdbx_keywords HYDROLASE/DNA _struct_keywords.text ;RESTRICTION ENDONUCLEASE-DNA COMPLEX, TYPE IIM, TYPE IIE, RESTRICTION ENZYME, DPNI, METHYLATION DEPENDENT, N6-METHYLADENINE, PD-(D/E)XK TYPE ENDONUCLEASE, WINGED HELIX DOMAIN, RESTRICTION ENDONUCLEASE, DNA BINDING, HYDROLASE-DNA COMPLEX ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 3 ? G N N 4 ? H N N 5 ? I N N 6 ? J N N 6 ? K N N 6 ? L N N 6 ? M N N 6 ? # _struct_biol.id 1 _struct_biol.details ;BIOLOGICAL UNIT CONTAINS PROTEIN CHAIN A AND TWO DOUBLE STRANDED DNA FRAGMENTS BOUND TO ITS N- AND C-TERMINAL DOMAINS. TO THE BEST OF OUR KNOWLEDGE THE OBSERVED COMPLEX CORRESPONDS TO THE ENZYME SUBSTRATE COMPLEX FORMED BY TYPE IIE R.DPNI RESTRICTION ENDONUCLEASE AND DOUBLE STRANDED DNA IN SOLUTION. THE PENTAMER (ACCORDING TO PDB CONVENTIONS) IS A COMPLEX OF THE ENZYME WITH TWO DOUBLE STRANDED DNA FRAGMENTS PRESENT IN THE CRYSTAL. ; # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 9 ? GLU A 14 ? ASN A 6 GLU A 11 5 ? 6 HELX_P HELX_P2 2 SER A 18 ? SER A 35 ? SER A 15 SER A 32 1 ? 18 HELX_P HELX_P3 3 TYR A 84 ? VAL A 91 ? TYR A 81 VAL A 88 1 ? 8 HELX_P HELX_P4 4 PRO A 117 ? VAL A 121 ? PRO A 114 VAL A 118 5 ? 5 HELX_P HELX_P5 5 THR A 122 ? LYS A 124 ? THR A 119 LYS A 121 5 ? 3 HELX_P HELX_P6 6 PRO A 152 ? ARG A 156 ? PRO A 149 ARG A 153 5 ? 5 HELX_P HELX_P7 7 ASP A 167 ? LEU A 179 ? ASP A 164 LEU A 176 1 ? 13 HELX_P HELX_P8 8 GLY A 190 ? ILE A 202 ? GLY A 187 ILE A 199 1 ? 13 HELX_P HELX_P9 9 LEU A 209 ? TYR A 213 ? LEU A 206 TYR A 210 1 ? 5 HELX_P HELX_P10 10 PHE A 215 ? PHE A 223 ? PHE A 212 PHE A 220 1 ? 9 HELX_P HELX_P11 11 HIS A 228 ? LYS A 243 ? HIS A 225 LYS A 240 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B DG 4 "O3'" ? ? ? 1_555 B 6MA 5 P ? ? C DG 4 C 6MA 5 1_555 ? ? ? ? ? ? ? 1.597 ? ? covale2 covale both ? B 6MA 5 "O3'" ? ? ? 1_555 B DT 6 P ? ? C 6MA 5 C DT 6 1_555 ? ? ? ? ? ? ? 1.608 ? ? covale3 covale both ? C DG 4 "O3'" ? ? ? 1_555 C 6MA 5 P ? ? D DG 4 D 6MA 5 1_555 ? ? ? ? ? ? ? 1.613 ? ? covale4 covale both ? C 6MA 5 "O3'" ? ? ? 1_555 C DT 6 P ? ? D 6MA 5 D DT 6 1_555 ? ? ? ? ? ? ? 1.608 ? ? covale5 covale both ? D DG 4 "O3'" ? ? ? 1_555 D 6MA 5 P ? ? E DG 4 E 6MA 5 1_555 ? ? ? ? ? ? ? 1.608 ? ? covale6 covale both ? D 6MA 5 "O3'" ? ? ? 1_555 D DT 6 P ? ? E 6MA 5 E DT 6 1_555 ? ? ? ? ? ? ? 1.606 ? ? covale7 covale both ? E DG 4 "O3'" ? ? ? 1_555 E 6MA 5 P ? ? F DG 4 F 6MA 5 1_555 ? ? ? ? ? ? ? 1.607 ? ? covale8 covale both ? E 6MA 5 "O3'" ? ? ? 1_555 E DT 6 P ? ? F 6MA 5 F DT 6 1_555 ? ? ? ? ? ? ? 1.607 ? ? hydrog1 hydrog ? ? B DC 1 N3 ? ? ? 1_555 C DG 10 N1 ? ? C DC 1 D DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DC 1 N4 ? ? ? 1_555 C DG 10 O6 ? ? C DC 1 D DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DC 1 O2 ? ? ? 1_555 C DG 10 N2 ? ? C DC 1 D DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DT 2 N3 ? ? ? 1_555 C DA 9 N1 ? ? C DT 2 D DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DT 2 O4 ? ? ? 1_555 C DA 9 N6 ? ? C DT 2 D DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DG 3 N1 ? ? ? 1_555 C DC 8 N3 ? ? C DG 3 D DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DG 3 N2 ? ? ? 1_555 C DC 8 O2 ? ? C DG 3 D DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DG 3 O6 ? ? ? 1_555 C DC 8 N4 ? ? C DG 3 D DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DG 4 N1 ? ? ? 1_555 C DC 7 N3 ? ? C DG 4 D DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DG 4 N2 ? ? ? 1_555 C DC 7 O2 ? ? C DG 4 D DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DG 4 O6 ? ? ? 1_555 C DC 7 N4 ? ? C DG 4 D DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B 6MA 5 N1 ? ? ? 1_555 C DT 6 N3 ? ? C 6MA 5 D DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B 6MA 5 N6 ? ? ? 1_555 C DT 6 O4 ? ? C 6MA 5 D DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DT 6 N3 ? ? ? 1_555 C 6MA 5 N1 ? ? C DT 6 D 6MA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DT 6 O4 ? ? ? 1_555 C 6MA 5 N6 ? ? C DT 6 D 6MA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DC 7 N3 ? ? ? 1_555 C DG 4 N1 ? ? C DC 7 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DC 7 N4 ? ? ? 1_555 C DG 4 O6 ? ? C DC 7 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DC 7 O2 ? ? ? 1_555 C DG 4 N2 ? ? C DC 7 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DC 8 N3 ? ? ? 1_555 C DG 3 N1 ? ? C DC 8 D DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B DC 8 N4 ? ? ? 1_555 C DG 3 O6 ? ? C DC 8 D DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DC 8 O2 ? ? ? 1_555 C DG 3 N2 ? ? C DC 8 D DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DA 9 N1 ? ? ? 1_555 C DT 2 N3 ? ? C DA 9 D DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B DA 9 N6 ? ? ? 1_555 C DT 2 O4 ? ? C DA 9 D DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B DG 10 N1 ? ? ? 1_555 C DC 1 N3 ? ? C DG 10 D DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B DG 10 N2 ? ? ? 1_555 C DC 1 O2 ? ? C DG 10 D DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B DG 10 O6 ? ? ? 1_555 C DC 1 N4 ? ? C DG 10 D DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? D DC 1 N3 ? ? ? 1_555 E DG 10 N1 ? ? E DC 1 F DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? D DC 1 N4 ? ? ? 1_555 E DG 10 O6 ? ? E DC 1 F DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? D DC 1 O2 ? ? ? 1_555 E DG 10 N2 ? ? E DC 1 F DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? D DT 2 N3 ? ? ? 1_555 E DA 9 N1 ? ? E DT 2 F DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? D DT 2 O4 ? ? ? 1_555 E DA 9 N6 ? ? E DT 2 F DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? D DG 3 N1 ? ? ? 1_555 E DC 8 N3 ? ? E DG 3 F DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? D DG 3 N2 ? ? ? 1_555 E DC 8 O2 ? ? E DG 3 F DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? D DG 3 O6 ? ? ? 1_555 E DC 8 N4 ? ? E DG 3 F DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? D DG 4 N1 ? ? ? 1_555 E DC 7 N3 ? ? E DG 4 F DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? D DG 4 N2 ? ? ? 1_555 E DC 7 O2 ? ? E DG 4 F DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? D DG 4 O6 ? ? ? 1_555 E DC 7 N4 ? ? E DG 4 F DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? D 6MA 5 N1 ? ? ? 1_555 E DT 6 N3 ? ? E 6MA 5 F DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? D 6MA 5 N6 ? ? ? 1_555 E DT 6 O4 ? ? E 6MA 5 F DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? D DT 6 N3 ? ? ? 1_555 E 6MA 5 N1 ? ? E DT 6 F 6MA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? D DT 6 O4 ? ? ? 1_555 E 6MA 5 N6 ? ? E DT 6 F 6MA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? D DC 7 N3 ? ? ? 1_555 E DG 4 N1 ? ? E DC 7 F DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? D DC 7 N4 ? ? ? 1_555 E DG 4 O6 ? ? E DC 7 F DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? D DC 7 O2 ? ? ? 1_555 E DG 4 N2 ? ? E DC 7 F DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? D DC 8 N3 ? ? ? 1_555 E DG 3 N1 ? ? E DC 8 F DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? D DC 8 N4 ? ? ? 1_555 E DG 3 O6 ? ? E DC 8 F DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? D DC 8 O2 ? ? ? 1_555 E DG 3 N2 ? ? E DC 8 F DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? D DA 9 N1 ? ? ? 1_555 E DT 2 N3 ? ? E DA 9 F DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? D DA 9 N6 ? ? ? 1_555 E DT 2 O4 ? ? E DA 9 F DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? D DG 10 N1 ? ? ? 1_555 E DC 1 N3 ? ? E DG 10 F DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? D DG 10 N2 ? ? ? 1_555 E DC 1 O2 ? ? E DG 10 F DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? D DG 10 O6 ? ? ? 1_555 E DC 1 N4 ? ? E DG 10 F DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ASN _struct_mon_prot_cis.label_seq_id 43 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ASN _struct_mon_prot_cis.auth_seq_id 40 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 44 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 41 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -2.60 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 7 ? B ? 3 ? C ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ASN A 46 ? HIS A 47 ? ASN A 43 HIS A 44 A 2 PHE A 57 ? TYR A 58 ? PHE A 54 TYR A 55 A 3 GLU A 65 ? LYS A 72 ? GLU A 62 LYS A 69 A 4 ASN A 98 ? TYR A 104 ? ASN A 95 TYR A 101 A 5 VAL A 110 ? LEU A 116 ? VAL A 107 LEU A 113 A 6 ILE A 157 ? GLN A 161 ? ILE A 154 GLN A 158 A 7 GLN A 164 ? VAL A 165 ? GLN A 161 VAL A 162 B 1 THR A 78 ? ALA A 83 ? THR A 75 ALA A 80 B 2 GLY A 143 ? ASP A 147 ? GLY A 140 ASP A 144 B 3 ILE A 126 ? GLN A 128 ? ILE A 123 GLN A 125 C 1 GLU A 206 ? THR A 208 ? GLU A 203 THR A 205 C 2 LYS A 253 ? LYS A 256 ? LYS A 250 LYS A 253 C 3 ILE A 246 ? PHE A 248 ? ILE A 243 PHE A 245 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ASN A 46 ? N ASN A 43 O TYR A 58 ? O TYR A 55 A 2 3 N PHE A 57 ? N PHE A 54 O PHE A 66 ? O PHE A 63 A 3 4 N GLU A 65 ? N GLU A 62 O ASN A 98 ? O ASN A 95 A 4 5 N THR A 103 ? N THR A 100 O ASN A 112 ? O ASN A 109 A 5 6 N PHE A 113 ? N PHE A 110 O LEU A 159 ? O LEU A 156 A 6 7 N GLN A 161 ? N GLN A 158 O GLN A 164 ? O GLN A 161 B 1 2 N ILE A 79 ? N ILE A 76 O ILE A 146 ? O ILE A 143 B 2 3 O ASN A 145 ? O ASN A 142 N ILE A 127 ? N ILE A 124 C 1 2 N PHE A 207 ? N PHE A 204 O TYR A 254 ? O TYR A 251 C 2 3 O ARG A 255 ? O ARG A 252 N GLU A 247 ? N GLU A 244 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 301 ? 4 'BINDING SITE FOR RESIDUE ZN A 301' AC2 Software A CA 302 ? 6 'BINDING SITE FOR RESIDUE CA A 302' AC3 Software A NA 303 ? 6 'BINDING SITE FOR RESIDUE NA A 303' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS A 37 ? CYS A 34 . ? 1_555 ? 2 AC1 4 CYS A 40 ? CYS A 37 . ? 1_555 ? 3 AC1 4 CYS A 59 ? CYS A 56 . ? 1_555 ? 4 AC1 4 CYS A 62 ? CYS A 59 . ? 1_555 ? 5 AC2 6 ASP A 56 ? ASP A 53 . ? 1_555 ? 6 AC2 6 GLU A 67 ? GLU A 64 . ? 1_555 ? 7 AC2 6 LEU A 68 ? LEU A 65 . ? 1_555 ? 8 AC2 6 HOH I . ? HOH A 425 . ? 1_555 ? 9 AC2 6 HOH I . ? HOH A 452 . ? 1_555 ? 10 AC2 6 DT B 6 ? DT C 6 . ? 1_555 ? 11 AC3 6 ASP A 56 ? ASP A 53 . ? 1_555 ? 12 AC3 6 HOH I . ? HOH A 403 . ? 1_555 ? 13 AC3 6 HOH I . ? HOH A 422 . ? 1_555 ? 14 AC3 6 HOH I . ? HOH A 443 . ? 1_555 ? 15 AC3 6 6MA B 5 ? 6MA C 5 . ? 1_555 ? 16 AC3 6 DT B 6 ? DT C 6 . ? 1_555 ? # _database_PDB_matrix.entry_id 4KYW _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4KYW _atom_sites.fract_transf_matrix[1][1] 0.010449 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009896 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008707 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA N NA O P S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -2 ? ? ? A . n A 1 2 PRO 2 -1 ? ? ? A . n A 1 3 HIS 3 0 ? ? ? A . n A 1 4 MET 4 1 1 MET MET A . n A 1 5 GLU 5 2 2 GLU GLU A . n A 1 6 LEU 6 3 3 LEU LEU A . n A 1 7 HIS 7 4 4 HIS HIS A . n A 1 8 PHE 8 5 5 PHE PHE A . n A 1 9 ASN 9 6 6 ASN ASN A . n A 1 10 LEU 10 7 7 LEU LEU A . n A 1 11 GLU 11 8 8 GLU GLU A . n A 1 12 LEU 12 9 9 LEU LEU A . n A 1 13 VAL 13 10 10 VAL VAL A . n A 1 14 GLU 14 11 11 GLU GLU A . n A 1 15 THR 15 12 12 THR THR A . n A 1 16 TYR 16 13 13 TYR TYR A . n A 1 17 LYS 17 14 14 LYS LYS A . n A 1 18 SER 18 15 15 SER SER A . n A 1 19 ASN 19 16 16 ASN ASN A . n A 1 20 SER 20 17 17 SER SER A . n A 1 21 GLN 21 18 18 GLN GLN A . n A 1 22 LYS 22 19 19 LYS LYS A . n A 1 23 ALA 23 20 20 ALA ALA A . n A 1 24 ARG 24 21 21 ARG ARG A . n A 1 25 ILE 25 22 22 ILE ILE A . n A 1 26 LEU 26 23 23 LEU LEU A . n A 1 27 THR 27 24 24 THR THR A . n A 1 28 GLU 28 25 25 GLU GLU A . n A 1 29 ASP 29 26 26 ASP ASP A . n A 1 30 TRP 30 27 27 TRP TRP A . n A 1 31 VAL 31 28 28 VAL VAL A . n A 1 32 TYR 32 29 29 TYR TYR A . n A 1 33 ARG 33 30 30 ARG ARG A . n A 1 34 GLN 34 31 31 GLN GLN A . n A 1 35 SER 35 32 32 SER SER A . n A 1 36 TYR 36 33 33 TYR TYR A . n A 1 37 CYS 37 34 34 CYS CYS A . n A 1 38 PRO 38 35 35 PRO PRO A . n A 1 39 ASN 39 36 36 ASN ASN A . n A 1 40 CYS 40 37 37 CYS CYS A . n A 1 41 GLY 41 38 38 GLY GLY A . n A 1 42 ASN 42 39 39 ASN ASN A . n A 1 43 ASN 43 40 40 ASN ASN A . n A 1 44 PRO 44 41 41 PRO PRO A . n A 1 45 LEU 45 42 42 LEU LEU A . n A 1 46 ASN 46 43 43 ASN ASN A . n A 1 47 HIS 47 44 44 HIS HIS A . n A 1 48 PHE 48 45 45 PHE PHE A . n A 1 49 GLU 49 46 46 GLU GLU A . n A 1 50 ASN 50 47 47 ASN ASN A . n A 1 51 ASN 51 48 48 ASN ASN A . n A 1 52 ARG 52 49 49 ARG ARG A . n A 1 53 PRO 53 50 50 PRO PRO A . n A 1 54 VAL 54 51 51 VAL VAL A . n A 1 55 ALA 55 52 52 ALA ALA A . n A 1 56 ASP 56 53 53 ASP ASP A . n A 1 57 PHE 57 54 54 PHE PHE A . n A 1 58 TYR 58 55 55 TYR TYR A . n A 1 59 CYS 59 56 56 CYS CYS A . n A 1 60 ASN 60 57 57 ASN ASN A . n A 1 61 HIS 61 58 58 HIS HIS A . n A 1 62 CYS 62 59 59 CYS CYS A . n A 1 63 SER 63 60 60 SER SER A . n A 1 64 GLU 64 61 61 GLU GLU A . n A 1 65 GLU 65 62 62 GLU GLU A . n A 1 66 PHE 66 63 63 PHE PHE A . n A 1 67 GLU 67 64 64 GLU GLU A . n A 1 68 LEU 68 65 65 LEU LEU A . n A 1 69 LYS 69 66 66 LYS LYS A . n A 1 70 SER 70 67 67 SER SER A . n A 1 71 LYS 71 68 68 LYS LYS A . n A 1 72 LYS 72 69 69 LYS LYS A . n A 1 73 GLY 73 70 70 GLY GLY A . n A 1 74 ASN 74 71 71 ASN ASN A . n A 1 75 PHE 75 72 72 PHE PHE A . n A 1 76 SER 76 73 73 SER SER A . n A 1 77 SER 77 74 74 SER SER A . n A 1 78 THR 78 75 75 THR THR A . n A 1 79 ILE 79 76 76 ILE ILE A . n A 1 80 ASN 80 77 77 ASN ASN A . n A 1 81 ASP 81 78 78 ASP ASP A . n A 1 82 GLY 82 79 79 GLY GLY A . n A 1 83 ALA 83 80 80 ALA ALA A . n A 1 84 TYR 84 81 81 TYR TYR A . n A 1 85 ALA 85 82 82 ALA ALA A . n A 1 86 THR 86 83 83 THR THR A . n A 1 87 MET 87 84 84 MET MET A . n A 1 88 MET 88 85 85 MET MET A . n A 1 89 LYS 89 86 86 LYS LYS A . n A 1 90 ARG 90 87 87 ARG ARG A . n A 1 91 VAL 91 88 88 VAL VAL A . n A 1 92 GLN 92 89 89 GLN GLN A . n A 1 93 ALA 93 90 90 ALA ALA A . n A 1 94 ASP 94 91 91 ASP ASP A . n A 1 95 ASN 95 92 92 ASN ASN A . n A 1 96 ASN 96 93 93 ASN ASN A . n A 1 97 PRO 97 94 94 PRO PRO A . n A 1 98 ASN 98 95 95 ASN ASN A . n A 1 99 PHE 99 96 96 PHE PHE A . n A 1 100 PHE 100 97 97 PHE PHE A . n A 1 101 PHE 101 98 98 PHE PHE A . n A 1 102 LEU 102 99 99 LEU LEU A . n A 1 103 THR 103 100 100 THR THR A . n A 1 104 TYR 104 101 101 TYR TYR A . n A 1 105 THR 105 102 102 THR THR A . n A 1 106 LYS 106 103 103 LYS LYS A . n A 1 107 ASN 107 104 104 ASN ASN A . n A 1 108 PHE 108 105 105 PHE PHE A . n A 1 109 GLU 109 106 106 GLU GLU A . n A 1 110 VAL 110 107 107 VAL VAL A . n A 1 111 ASN 111 108 108 ASN ASN A . n A 1 112 ASN 112 109 109 ASN ASN A . n A 1 113 PHE 113 110 110 PHE PHE A . n A 1 114 LEU 114 111 111 LEU LEU A . n A 1 115 VAL 115 112 112 VAL VAL A . n A 1 116 LEU 116 113 113 LEU LEU A . n A 1 117 PRO 117 114 114 PRO PRO A . n A 1 118 LYS 118 115 115 LYS LYS A . n A 1 119 GLN 119 116 116 GLN GLN A . n A 1 120 PHE 120 117 117 PHE PHE A . n A 1 121 VAL 121 118 118 VAL VAL A . n A 1 122 THR 122 119 119 THR THR A . n A 1 123 PRO 123 120 120 PRO PRO A . n A 1 124 LYS 124 121 121 LYS LYS A . n A 1 125 SER 125 122 122 SER SER A . n A 1 126 ILE 126 123 123 ILE ILE A . n A 1 127 ILE 127 124 124 ILE ILE A . n A 1 128 GLN 128 125 125 GLN GLN A . n A 1 129 ARG 129 126 126 ARG ARG A . n A 1 130 LYS 130 127 127 LYS LYS A . n A 1 131 PRO 131 128 128 PRO PRO A . n A 1 132 LEU 132 129 129 LEU LEU A . n A 1 133 ALA 133 130 130 ALA ALA A . n A 1 134 PRO 134 131 131 PRO PRO A . n A 1 135 THR 135 132 132 THR THR A . n A 1 136 ALA 136 133 133 ALA ALA A . n A 1 137 ASN 137 134 134 ASN ASN A . n A 1 138 ARG 138 135 135 ARG ARG A . n A 1 139 ALA 139 136 136 ALA ALA A . n A 1 140 GLY 140 137 137 GLY GLY A . n A 1 141 TRP 141 138 138 TRP TRP A . n A 1 142 ILE 142 139 139 ILE ILE A . n A 1 143 GLY 143 140 140 GLY GLY A . n A 1 144 CYS 144 141 141 CYS CYS A . n A 1 145 ASN 145 142 142 ASN ASN A . n A 1 146 ILE 146 143 143 ILE ILE A . n A 1 147 ASP 147 144 144 ASP ASP A . n A 1 148 LEU 148 145 145 LEU LEU A . n A 1 149 SER 149 146 146 SER SER A . n A 1 150 GLN 150 147 147 GLN GLN A . n A 1 151 VAL 151 148 148 VAL VAL A . n A 1 152 PRO 152 149 149 PRO PRO A . n A 1 153 SER 153 150 150 SER SER A . n A 1 154 LYS 154 151 151 LYS LYS A . n A 1 155 GLY 155 152 152 GLY GLY A . n A 1 156 ARG 156 153 153 ARG ARG A . n A 1 157 ILE 157 154 154 ILE ILE A . n A 1 158 PHE 158 155 155 PHE PHE A . n A 1 159 LEU 159 156 156 LEU LEU A . n A 1 160 VAL 160 157 157 VAL VAL A . n A 1 161 GLN 161 158 158 GLN GLN A . n A 1 162 ASP 162 159 159 ASP ASP A . n A 1 163 GLY 163 160 160 GLY GLY A . n A 1 164 GLN 164 161 161 GLN GLN A . n A 1 165 VAL 165 162 162 VAL VAL A . n A 1 166 ARG 166 163 163 ARG ARG A . n A 1 167 ASP 167 164 164 ASP ASP A . n A 1 168 PRO 168 165 165 PRO PRO A . n A 1 169 GLU 169 166 166 GLU GLU A . n A 1 170 LYS 170 167 167 LYS LYS A . n A 1 171 VAL 171 168 168 VAL VAL A . n A 1 172 THR 172 169 169 THR THR A . n A 1 173 LYS 173 170 170 LYS LYS A . n A 1 174 GLU 174 171 171 GLU GLU A . n A 1 175 PHE 175 172 172 PHE PHE A . n A 1 176 LYS 176 173 173 LYS LYS A . n A 1 177 GLN 177 174 174 GLN GLN A . n A 1 178 GLY 178 175 175 GLY GLY A . n A 1 179 LEU 179 176 176 LEU LEU A . n A 1 180 PHE 180 177 177 PHE PHE A . n A 1 181 LEU 181 178 178 LEU LEU A . n A 1 182 ARG 182 179 179 ARG ARG A . n A 1 183 LYS 183 180 180 LYS LYS A . n A 1 184 SER 184 181 181 SER SER A . n A 1 185 SER 185 182 182 SER SER A . n A 1 186 LEU 186 183 183 LEU LEU A . n A 1 187 SER 187 184 184 SER SER A . n A 1 188 SER 188 185 185 SER SER A . n A 1 189 ARG 189 186 186 ARG ARG A . n A 1 190 GLY 190 187 187 GLY GLY A . n A 1 191 TRP 191 188 188 TRP TRP A . n A 1 192 THR 192 189 189 THR THR A . n A 1 193 ILE 193 190 190 ILE ILE A . n A 1 194 GLU 194 191 191 GLU GLU A . n A 1 195 ILE 195 192 192 ILE ILE A . n A 1 196 LEU 196 193 193 LEU LEU A . n A 1 197 ASN 197 194 194 ASN ASN A . n A 1 198 CYS 198 195 195 CYS CYS A . n A 1 199 ILE 199 196 196 ILE ILE A . n A 1 200 ASP 200 197 197 ASP ASP A . n A 1 201 LYS 201 198 198 LYS LYS A . n A 1 202 ILE 202 199 199 ILE ILE A . n A 1 203 GLU 203 200 200 GLU GLU A . n A 1 204 GLY 204 201 201 GLY GLY A . n A 1 205 SER 205 202 202 SER SER A . n A 1 206 GLU 206 203 203 GLU GLU A . n A 1 207 PHE 207 204 204 PHE PHE A . n A 1 208 THR 208 205 205 THR THR A . n A 1 209 LEU 209 206 206 LEU LEU A . n A 1 210 GLU 210 207 207 GLU GLU A . n A 1 211 ASP 211 208 208 ASP ASP A . n A 1 212 MET 212 209 209 MET MET A . n A 1 213 TYR 213 210 210 TYR TYR A . n A 1 214 ARG 214 211 211 ARG ARG A . n A 1 215 PHE 215 212 212 PHE PHE A . n A 1 216 GLU 216 213 213 GLU GLU A . n A 1 217 SER 217 214 214 SER SER A . n A 1 218 ASP 218 215 215 ASP ASP A . n A 1 219 LEU 219 216 216 LEU LEU A . n A 1 220 LYS 220 217 217 LYS LYS A . n A 1 221 ASN 221 218 218 ASN ASN A . n A 1 222 ILE 222 219 219 ILE ILE A . n A 1 223 PHE 223 220 220 PHE PHE A . n A 1 224 VAL 224 221 221 VAL VAL A . n A 1 225 LYS 225 222 222 LYS LYS A . n A 1 226 ASN 226 223 223 ASN ASN A . n A 1 227 ASN 227 224 224 ASN ASN A . n A 1 228 HIS 228 225 225 HIS HIS A . n A 1 229 ILE 229 226 226 ILE ILE A . n A 1 230 LYS 230 227 227 LYS LYS A . n A 1 231 GLU 231 228 228 GLU GLU A . n A 1 232 LYS 232 229 229 LYS LYS A . n A 1 233 ILE 233 230 230 ILE ILE A . n A 1 234 ARG 234 231 231 ARG ARG A . n A 1 235 GLN 235 232 232 GLN GLN A . n A 1 236 GLN 236 233 233 GLN GLN A . n A 1 237 LEU 237 234 234 LEU LEU A . n A 1 238 GLN 238 235 235 GLN GLN A . n A 1 239 ILE 239 236 236 ILE ILE A . n A 1 240 LEU 240 237 237 LEU LEU A . n A 1 241 ARG 241 238 238 ARG ARG A . n A 1 242 ASP 242 239 239 ASP ASP A . n A 1 243 LYS 243 240 240 LYS LYS A . n A 1 244 GLU 244 241 241 GLU GLU A . n A 1 245 ILE 245 242 242 ILE ILE A . n A 1 246 ILE 246 243 243 ILE ILE A . n A 1 247 GLU 247 244 244 GLU GLU A . n A 1 248 PHE 248 245 245 PHE PHE A . n A 1 249 LYS 249 246 246 LYS LYS A . n A 1 250 GLY 250 247 247 GLY GLY A . n A 1 251 ARG 251 248 248 ARG ARG A . n A 1 252 GLY 252 249 249 GLY GLY A . n A 1 253 LYS 253 250 250 LYS LYS A . n A 1 254 TYR 254 251 251 TYR TYR A . n A 1 255 ARG 255 252 252 ARG ARG A . n A 1 256 LYS 256 253 253 LYS LYS A . n A 1 257 LEU 257 254 254 LEU LEU A . n B 2 1 DC 1 1 1 DC C C . n B 2 2 DT 2 2 2 DT T C . n B 2 3 DG 3 3 3 DG G C . n B 2 4 DG 4 4 4 DG G C . n B 2 5 6MA 5 5 5 6MA 6MA C . n B 2 6 DT 6 6 6 DT T C . n B 2 7 DC 7 7 7 DC C C . n B 2 8 DC 8 8 8 DC C C . n B 2 9 DA 9 9 9 DA A C . n B 2 10 DG 10 10 10 DG G C . n C 2 1 DC 1 1 1 DC C D . n C 2 2 DT 2 2 2 DT T D . n C 2 3 DG 3 3 3 DG G D . n C 2 4 DG 4 4 4 DG G D . n C 2 5 6MA 5 5 5 6MA 6MA D . n C 2 6 DT 6 6 6 DT T D . n C 2 7 DC 7 7 7 DC C D . n C 2 8 DC 8 8 8 DC C D . n C 2 9 DA 9 9 9 DA A D . n C 2 10 DG 10 10 10 DG G D . n D 2 1 DC 1 1 1 DC C E . n D 2 2 DT 2 2 2 DT T E . n D 2 3 DG 3 3 3 DG G E . n D 2 4 DG 4 4 4 DG G E . n D 2 5 6MA 5 5 5 6MA 6MA E . n D 2 6 DT 6 6 6 DT T E . n D 2 7 DC 7 7 7 DC C E . n D 2 8 DC 8 8 8 DC C E . n D 2 9 DA 9 9 9 DA A E . n D 2 10 DG 10 10 10 DG G E . n E 2 1 DC 1 1 1 DC C F . n E 2 2 DT 2 2 2 DT T F . n E 2 3 DG 3 3 3 DG G F . n E 2 4 DG 4 4 4 DG G F . n E 2 5 6MA 5 5 5 6MA 6MA F . n E 2 6 DT 6 6 6 DT T F . n E 2 7 DC 7 7 7 DC C F . n E 2 8 DC 8 8 8 DC C F . n E 2 9 DA 9 9 9 DA A F . n E 2 10 DG 10 10 10 DG G F . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code F 3 ZN 1 301 1 ZN ZN A . G 4 CA 1 302 2 CA CA A . H 5 NA 1 303 3 NA NA A . I 6 HOH 1 401 1 HOH HOH A . I 6 HOH 2 402 2 HOH HOH A . I 6 HOH 3 403 3 HOH HOH A . I 6 HOH 4 404 6 HOH HOH A . I 6 HOH 5 405 7 HOH HOH A . I 6 HOH 6 406 8 HOH HOH A . I 6 HOH 7 407 9 HOH HOH A . I 6 HOH 8 408 12 HOH HOH A . I 6 HOH 9 409 13 HOH HOH A . I 6 HOH 10 410 14 HOH HOH A . I 6 HOH 11 411 17 HOH HOH A . I 6 HOH 12 412 18 HOH HOH A . I 6 HOH 13 413 21 HOH HOH A . I 6 HOH 14 414 22 HOH HOH A . I 6 HOH 15 415 25 HOH HOH A . I 6 HOH 16 416 26 HOH HOH A . I 6 HOH 17 417 27 HOH HOH A . I 6 HOH 18 418 29 HOH HOH A . I 6 HOH 19 419 31 HOH HOH A . I 6 HOH 20 420 32 HOH HOH A . I 6 HOH 21 421 34 HOH HOH A . I 6 HOH 22 422 36 HOH HOH A . I 6 HOH 23 423 37 HOH HOH A . I 6 HOH 24 424 39 HOH HOH A . I 6 HOH 25 425 40 HOH HOH A . I 6 HOH 26 426 41 HOH HOH A . I 6 HOH 27 427 42 HOH HOH A . I 6 HOH 28 428 43 HOH HOH A . I 6 HOH 29 429 44 HOH HOH A . I 6 HOH 30 430 45 HOH HOH A . I 6 HOH 31 431 46 HOH HOH A . I 6 HOH 32 432 48 HOH HOH A . I 6 HOH 33 433 49 HOH HOH A . I 6 HOH 34 434 50 HOH HOH A . I 6 HOH 35 435 51 HOH HOH A . I 6 HOH 36 436 52 HOH HOH A . I 6 HOH 37 437 53 HOH HOH A . I 6 HOH 38 438 57 HOH HOH A . I 6 HOH 39 439 61 HOH HOH A . I 6 HOH 40 440 62 HOH HOH A . I 6 HOH 41 441 69 HOH HOH A . I 6 HOH 42 442 70 HOH HOH A . I 6 HOH 43 443 75 HOH HOH A . I 6 HOH 44 444 80 HOH HOH A . I 6 HOH 45 445 83 HOH HOH A . I 6 HOH 46 446 85 HOH HOH A . I 6 HOH 47 447 90 HOH HOH A . I 6 HOH 48 448 91 HOH HOH A . I 6 HOH 49 449 93 HOH HOH A . I 6 HOH 50 450 94 HOH HOH A . I 6 HOH 51 451 95 HOH HOH A . I 6 HOH 52 452 97 HOH HOH A . I 6 HOH 53 453 100 HOH HOH A . I 6 HOH 54 454 101 HOH HOH A . I 6 HOH 55 455 102 HOH HOH A . J 6 HOH 1 201 4 HOH HOH C . J 6 HOH 2 202 15 HOH HOH C . J 6 HOH 3 203 16 HOH HOH C . J 6 HOH 4 204 20 HOH HOH C . J 6 HOH 5 205 30 HOH HOH C . J 6 HOH 6 206 38 HOH HOH C . J 6 HOH 7 207 54 HOH HOH C . J 6 HOH 8 208 66 HOH HOH C . J 6 HOH 9 209 71 HOH HOH C . J 6 HOH 10 210 72 HOH HOH C . J 6 HOH 11 211 76 HOH HOH C . J 6 HOH 12 212 78 HOH HOH C . J 6 HOH 13 213 103 HOH HOH C . J 6 HOH 14 214 105 HOH HOH C . J 6 HOH 15 215 106 HOH HOH C . K 6 HOH 1 101 10 HOH HOH D . K 6 HOH 2 102 35 HOH HOH D . K 6 HOH 3 103 58 HOH HOH D . K 6 HOH 4 104 59 HOH HOH D . K 6 HOH 5 105 60 HOH HOH D . K 6 HOH 6 106 63 HOH HOH D . K 6 HOH 7 107 67 HOH HOH D . K 6 HOH 8 108 86 HOH HOH D . K 6 HOH 9 109 99 HOH HOH D . K 6 HOH 10 110 104 HOH HOH D . K 6 HOH 11 111 107 HOH HOH D . L 6 HOH 1 101 5 HOH HOH E . L 6 HOH 2 102 28 HOH HOH E . L 6 HOH 3 103 74 HOH HOH E . L 6 HOH 4 104 87 HOH HOH E . L 6 HOH 5 105 98 HOH HOH E . M 6 HOH 1 101 47 HOH HOH F . M 6 HOH 2 102 65 HOH HOH F . M 6 HOH 3 103 68 HOH HOH F . M 6 HOH 4 104 77 HOH HOH F . M 6 HOH 5 105 89 HOH HOH F . M 6 HOH 6 106 92 HOH HOH F . M 6 HOH 7 107 108 HOH HOH F . M 6 HOH 8 108 109 HOH HOH F . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 B 6MA 5 C 6MA 5 ? A ? 2 C 6MA 5 D 6MA 5 ? A ? 3 D 6MA 5 E 6MA 5 ? A ? 4 E 6MA 5 F 6MA 5 ? A ? # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 9680 ? 1 MORE -42 ? 1 'SSA (A^2)' 16660 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-06-04 2 'Structure model' 1 1 2014-07-02 3 'Structure model' 1 2 2014-07-09 4 'Structure model' 1 3 2014-08-20 5 'Structure model' 1 4 2018-03-07 6 'Structure model' 1 5 2023-09-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Database references' 4 5 'Structure model' 'Data collection' 5 6 'Structure model' 'Data collection' 6 6 'Structure model' 'Database references' 7 6 'Structure model' 'Derived calculations' 8 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' diffrn_source 2 6 'Structure model' chem_comp_atom 3 6 'Structure model' chem_comp_bond 4 6 'Structure model' database_2 5 6 'Structure model' pdbx_initial_refinement_model 6 6 'Structure model' struct_conn 7 6 'Structure model' struct_ref_seq_dif 8 6 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_diffrn_source.pdbx_synchrotron_site' 2 6 'Structure model' '_database_2.pdbx_DOI' 3 6 'Structure model' '_database_2.pdbx_database_accession' 4 6 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 5 6 'Structure model' '_struct_ref_seq_dif.details' 6 6 'Structure model' '_struct_site.pdbx_auth_asym_id' 7 6 'Structure model' '_struct_site.pdbx_auth_comp_id' 8 6 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined -35.8980 61.7160 -44.5240 0.0605 0.1110 -0.0444 -0.0136 0.0163 0.0115 0.9863 1.6433 2.5057 -0.6052 0.2395 -0.0195 -0.0248 0.0293 -0.0045 0.0654 0.1812 -0.1441 -0.1073 0.1609 0.3614 'X-RAY DIFFRACTION' 2 ? refined -12.9170 49.8850 -23.0390 -0.0626 0.0333 0.1340 0.1251 0.0749 0.0426 5.2790 3.2687 6.9367 -0.4907 -1.1320 -0.5751 -0.1319 0.1811 -0.0492 0.0292 0.2313 -0.2340 0.0068 -0.2114 0.0806 'X-RAY DIFFRACTION' 3 ? refined -50.8430 68.4980 -47.6200 0.0762 0.1011 0.0684 -0.0555 -0.0744 -0.0210 0.9907 1.3154 2.7803 -1.0393 -0.9890 0.5438 0.0059 -0.1622 0.1563 -0.0771 0.1352 0.2124 -0.3531 -0.0782 -0.1883 'X-RAY DIFFRACTION' 4 ? refined -20.5460 43.3600 -12.1760 0.0874 0.2324 0.1759 0.1814 0.0756 0.0328 2.3527 4.5193 2.3223 -2.2427 -0.2342 -0.3101 -0.2948 0.1417 0.1531 -0.0361 0.0866 -0.1188 0.6167 0.0430 -0.4644 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 1 A 182 ? . . . . ? 'X-RAY DIFFRACTION' 2 1 A 301 A 302 ? . . . . ? 'X-RAY DIFFRACTION' 3 1 A 303 A 303 ? . . . . ? 'X-RAY DIFFRACTION' 4 2 A 183 A 254 ? . . . . ? 'X-RAY DIFFRACTION' 5 3 C 1 C 10 ? . . . . ? 'X-RAY DIFFRACTION' 6 3 D 1 D 10 ? . . . . ? 'X-RAY DIFFRACTION' 7 4 E 1 E 10 ? . . . . ? 'X-RAY DIFFRACTION' 8 4 F 1 F 10 ? . . . . ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MOLREP phasing . ? 1 ARP/wARP 'model building' . ? 2 REFMAC refinement 5.2.0019 ? 3 XDS 'data reduction' . ? 4 XSCALE 'data scaling' . ? 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 78 ? ? -141.78 -155.14 2 1 ASN A 92 ? ? -103.09 44.74 3 1 ARG A 135 ? ? -94.76 59.43 4 1 ASP A 159 ? ? 39.24 54.77 5 1 PHE A 220 ? ? -116.18 70.84 6 1 HIS A 225 ? ? -142.27 54.64 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id DT _pdbx_validate_planes.auth_asym_id C _pdbx_validate_planes.auth_seq_id 6 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.063 _pdbx_validate_planes.type 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -2 ? A GLY 1 2 1 Y 1 A PRO -1 ? A PRO 2 3 1 Y 1 A HIS 0 ? A HIS 3 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 6MA OP3 O N N 1 6MA P P N N 2 6MA OP1 O N N 3 6MA OP2 O N N 4 6MA "O5'" O N N 5 6MA "C5'" C N N 6 6MA "C4'" C N R 7 6MA "O4'" O N N 8 6MA "C3'" C N S 9 6MA "O3'" O N N 10 6MA "C2'" C N N 11 6MA "C1'" C N R 12 6MA N9 N Y N 13 6MA C8 C Y N 14 6MA N7 N Y N 15 6MA C5 C Y N 16 6MA C6 C Y N 17 6MA N1 N Y N 18 6MA C2 C Y N 19 6MA N3 N Y N 20 6MA C4 C Y N 21 6MA N6 N N N 22 6MA C1 C N N 23 6MA HOP3 H N N 24 6MA HOP2 H N N 25 6MA "H5'" H N N 26 6MA "H5''" H N N 27 6MA "H4'" H N N 28 6MA "H3'" H N N 29 6MA "HO3'" H N N 30 6MA "H2'" H N N 31 6MA "H2''" H N N 32 6MA "H1'" H N N 33 6MA H8 H N N 34 6MA H2 H N N 35 6MA H61 H N N 36 6MA H11 H N N 37 6MA H12 H N N 38 6MA H13 H N N 39 ALA N N N N 40 ALA CA C N S 41 ALA C C N N 42 ALA O O N N 43 ALA CB C N N 44 ALA OXT O N N 45 ALA H H N N 46 ALA H2 H N N 47 ALA HA H N N 48 ALA HB1 H N N 49 ALA HB2 H N N 50 ALA HB3 H N N 51 ALA HXT H N N 52 ARG N N N N 53 ARG CA C N S 54 ARG C C N N 55 ARG O O N N 56 ARG CB C N N 57 ARG CG C N N 58 ARG CD C N N 59 ARG NE N N N 60 ARG CZ C N N 61 ARG NH1 N N N 62 ARG NH2 N N N 63 ARG OXT O N N 64 ARG H H N N 65 ARG H2 H N N 66 ARG HA H N N 67 ARG HB2 H N N 68 ARG HB3 H N N 69 ARG HG2 H N N 70 ARG HG3 H N N 71 ARG HD2 H N N 72 ARG HD3 H N N 73 ARG HE H N N 74 ARG HH11 H N N 75 ARG HH12 H N N 76 ARG HH21 H N N 77 ARG HH22 H N N 78 ARG HXT H N N 79 ASN N N N N 80 ASN CA C N S 81 ASN C C N N 82 ASN O O N N 83 ASN CB C N N 84 ASN CG C N N 85 ASN OD1 O N N 86 ASN ND2 N N N 87 ASN OXT O N N 88 ASN H H N N 89 ASN H2 H N N 90 ASN HA H N N 91 ASN HB2 H N N 92 ASN HB3 H N N 93 ASN HD21 H N N 94 ASN HD22 H N N 95 ASN HXT H N N 96 ASP N N N N 97 ASP CA C N S 98 ASP C C N N 99 ASP O O N N 100 ASP CB C N N 101 ASP CG C N N 102 ASP OD1 O N N 103 ASP OD2 O N N 104 ASP OXT O N N 105 ASP H H N N 106 ASP H2 H N N 107 ASP HA H N N 108 ASP HB2 H N N 109 ASP HB3 H N N 110 ASP HD2 H N N 111 ASP HXT H N N 112 CA CA CA N N 113 CYS N N N N 114 CYS CA C N R 115 CYS C C N N 116 CYS O O N N 117 CYS CB C N N 118 CYS SG S N N 119 CYS OXT O N N 120 CYS H H N N 121 CYS H2 H N N 122 CYS HA H N N 123 CYS HB2 H N N 124 CYS HB3 H N N 125 CYS HG H N N 126 CYS HXT H N N 127 DA OP3 O N N 128 DA P P N N 129 DA OP1 O N N 130 DA OP2 O N N 131 DA "O5'" O N N 132 DA "C5'" C N N 133 DA "C4'" C N R 134 DA "O4'" O N N 135 DA "C3'" C N S 136 DA "O3'" O N N 137 DA "C2'" C N N 138 DA "C1'" C N R 139 DA N9 N Y N 140 DA C8 C Y N 141 DA N7 N Y N 142 DA C5 C Y N 143 DA C6 C Y N 144 DA N6 N N N 145 DA N1 N Y N 146 DA C2 C Y N 147 DA N3 N Y N 148 DA C4 C Y N 149 DA HOP3 H N N 150 DA HOP2 H N N 151 DA "H5'" H N N 152 DA "H5''" H N N 153 DA "H4'" H N N 154 DA "H3'" H N N 155 DA "HO3'" H N N 156 DA "H2'" H N N 157 DA "H2''" H N N 158 DA "H1'" H N N 159 DA H8 H N N 160 DA H61 H N N 161 DA H62 H N N 162 DA H2 H N N 163 DC OP3 O N N 164 DC P P N N 165 DC OP1 O N N 166 DC OP2 O N N 167 DC "O5'" O N N 168 DC "C5'" C N N 169 DC "C4'" C N R 170 DC "O4'" O N N 171 DC "C3'" C N S 172 DC "O3'" O N N 173 DC "C2'" C N N 174 DC "C1'" C N R 175 DC N1 N N N 176 DC C2 C N N 177 DC O2 O N N 178 DC N3 N N N 179 DC C4 C N N 180 DC N4 N N N 181 DC C5 C N N 182 DC C6 C N N 183 DC HOP3 H N N 184 DC HOP2 H N N 185 DC "H5'" H N N 186 DC "H5''" H N N 187 DC "H4'" H N N 188 DC "H3'" H N N 189 DC "HO3'" H N N 190 DC "H2'" H N N 191 DC "H2''" H N N 192 DC "H1'" H N N 193 DC H41 H N N 194 DC H42 H N N 195 DC H5 H N N 196 DC H6 H N N 197 DG OP3 O N N 198 DG P P N N 199 DG OP1 O N N 200 DG OP2 O N N 201 DG "O5'" O N N 202 DG "C5'" C N N 203 DG "C4'" C N R 204 DG "O4'" O N N 205 DG "C3'" C N S 206 DG "O3'" O N N 207 DG "C2'" C N N 208 DG "C1'" C N R 209 DG N9 N Y N 210 DG C8 C Y N 211 DG N7 N Y N 212 DG C5 C Y N 213 DG C6 C N N 214 DG O6 O N N 215 DG N1 N N N 216 DG C2 C N N 217 DG N2 N N N 218 DG N3 N N N 219 DG C4 C Y N 220 DG HOP3 H N N 221 DG HOP2 H N N 222 DG "H5'" H N N 223 DG "H5''" H N N 224 DG "H4'" H N N 225 DG "H3'" H N N 226 DG "HO3'" H N N 227 DG "H2'" H N N 228 DG "H2''" H N N 229 DG "H1'" H N N 230 DG H8 H N N 231 DG H1 H N N 232 DG H21 H N N 233 DG H22 H N N 234 DT OP3 O N N 235 DT P P N N 236 DT OP1 O N N 237 DT OP2 O N N 238 DT "O5'" O N N 239 DT "C5'" C N N 240 DT "C4'" C N R 241 DT "O4'" O N N 242 DT "C3'" C N S 243 DT "O3'" O N N 244 DT "C2'" C N N 245 DT "C1'" C N R 246 DT N1 N N N 247 DT C2 C N N 248 DT O2 O N N 249 DT N3 N N N 250 DT C4 C N N 251 DT O4 O N N 252 DT C5 C N N 253 DT C7 C N N 254 DT C6 C N N 255 DT HOP3 H N N 256 DT HOP2 H N N 257 DT "H5'" H N N 258 DT "H5''" H N N 259 DT "H4'" H N N 260 DT "H3'" H N N 261 DT "HO3'" H N N 262 DT "H2'" H N N 263 DT "H2''" H N N 264 DT "H1'" H N N 265 DT H3 H N N 266 DT H71 H N N 267 DT H72 H N N 268 DT H73 H N N 269 DT H6 H N N 270 GLN N N N N 271 GLN CA C N S 272 GLN C C N N 273 GLN O O N N 274 GLN CB C N N 275 GLN CG C N N 276 GLN CD C N N 277 GLN OE1 O N N 278 GLN NE2 N N N 279 GLN OXT O N N 280 GLN H H N N 281 GLN H2 H N N 282 GLN HA H N N 283 GLN HB2 H N N 284 GLN HB3 H N N 285 GLN HG2 H N N 286 GLN HG3 H N N 287 GLN HE21 H N N 288 GLN HE22 H N N 289 GLN HXT H N N 290 GLU N N N N 291 GLU CA C N S 292 GLU C C N N 293 GLU O O N N 294 GLU CB C N N 295 GLU CG C N N 296 GLU CD C N N 297 GLU OE1 O N N 298 GLU OE2 O N N 299 GLU OXT O N N 300 GLU H H N N 301 GLU H2 H N N 302 GLU HA H N N 303 GLU HB2 H N N 304 GLU HB3 H N N 305 GLU HG2 H N N 306 GLU HG3 H N N 307 GLU HE2 H N N 308 GLU HXT H N N 309 GLY N N N N 310 GLY CA C N N 311 GLY C C N N 312 GLY O O N N 313 GLY OXT O N N 314 GLY H H N N 315 GLY H2 H N N 316 GLY HA2 H N N 317 GLY HA3 H N N 318 GLY HXT H N N 319 HIS N N N N 320 HIS CA C N S 321 HIS C C N N 322 HIS O O N N 323 HIS CB C N N 324 HIS CG C Y N 325 HIS ND1 N Y N 326 HIS CD2 C Y N 327 HIS CE1 C Y N 328 HIS NE2 N Y N 329 HIS OXT O N N 330 HIS H H N N 331 HIS H2 H N N 332 HIS HA H N N 333 HIS HB2 H N N 334 HIS HB3 H N N 335 HIS HD1 H N N 336 HIS HD2 H N N 337 HIS HE1 H N N 338 HIS HE2 H N N 339 HIS HXT H N N 340 HOH O O N N 341 HOH H1 H N N 342 HOH H2 H N N 343 ILE N N N N 344 ILE CA C N S 345 ILE C C N N 346 ILE O O N N 347 ILE CB C N S 348 ILE CG1 C N N 349 ILE CG2 C N N 350 ILE CD1 C N N 351 ILE OXT O N N 352 ILE H H N N 353 ILE H2 H N N 354 ILE HA H N N 355 ILE HB H N N 356 ILE HG12 H N N 357 ILE HG13 H N N 358 ILE HG21 H N N 359 ILE HG22 H N N 360 ILE HG23 H N N 361 ILE HD11 H N N 362 ILE HD12 H N N 363 ILE HD13 H N N 364 ILE HXT H N N 365 LEU N N N N 366 LEU CA C N S 367 LEU C C N N 368 LEU O O N N 369 LEU CB C N N 370 LEU CG C N N 371 LEU CD1 C N N 372 LEU CD2 C N N 373 LEU OXT O N N 374 LEU H H N N 375 LEU H2 H N N 376 LEU HA H N N 377 LEU HB2 H N N 378 LEU HB3 H N N 379 LEU HG H N N 380 LEU HD11 H N N 381 LEU HD12 H N N 382 LEU HD13 H N N 383 LEU HD21 H N N 384 LEU HD22 H N N 385 LEU HD23 H N N 386 LEU HXT H N N 387 LYS N N N N 388 LYS CA C N S 389 LYS C C N N 390 LYS O O N N 391 LYS CB C N N 392 LYS CG C N N 393 LYS CD C N N 394 LYS CE C N N 395 LYS NZ N N N 396 LYS OXT O N N 397 LYS H H N N 398 LYS H2 H N N 399 LYS HA H N N 400 LYS HB2 H N N 401 LYS HB3 H N N 402 LYS HG2 H N N 403 LYS HG3 H N N 404 LYS HD2 H N N 405 LYS HD3 H N N 406 LYS HE2 H N N 407 LYS HE3 H N N 408 LYS HZ1 H N N 409 LYS HZ2 H N N 410 LYS HZ3 H N N 411 LYS HXT H N N 412 MET N N N N 413 MET CA C N S 414 MET C C N N 415 MET O O N N 416 MET CB C N N 417 MET CG C N N 418 MET SD S N N 419 MET CE C N N 420 MET OXT O N N 421 MET H H N N 422 MET H2 H N N 423 MET HA H N N 424 MET HB2 H N N 425 MET HB3 H N N 426 MET HG2 H N N 427 MET HG3 H N N 428 MET HE1 H N N 429 MET HE2 H N N 430 MET HE3 H N N 431 MET HXT H N N 432 NA NA NA N N 433 PHE N N N N 434 PHE CA C N S 435 PHE C C N N 436 PHE O O N N 437 PHE CB C N N 438 PHE CG C Y N 439 PHE CD1 C Y N 440 PHE CD2 C Y N 441 PHE CE1 C Y N 442 PHE CE2 C Y N 443 PHE CZ C Y N 444 PHE OXT O N N 445 PHE H H N N 446 PHE H2 H N N 447 PHE HA H N N 448 PHE HB2 H N N 449 PHE HB3 H N N 450 PHE HD1 H N N 451 PHE HD2 H N N 452 PHE HE1 H N N 453 PHE HE2 H N N 454 PHE HZ H N N 455 PHE HXT H N N 456 PRO N N N N 457 PRO CA C N S 458 PRO C C N N 459 PRO O O N N 460 PRO CB C N N 461 PRO CG C N N 462 PRO CD C N N 463 PRO OXT O N N 464 PRO H H N N 465 PRO HA H N N 466 PRO HB2 H N N 467 PRO HB3 H N N 468 PRO HG2 H N N 469 PRO HG3 H N N 470 PRO HD2 H N N 471 PRO HD3 H N N 472 PRO HXT H N N 473 SER N N N N 474 SER CA C N S 475 SER C C N N 476 SER O O N N 477 SER CB C N N 478 SER OG O N N 479 SER OXT O N N 480 SER H H N N 481 SER H2 H N N 482 SER HA H N N 483 SER HB2 H N N 484 SER HB3 H N N 485 SER HG H N N 486 SER HXT H N N 487 THR N N N N 488 THR CA C N S 489 THR C C N N 490 THR O O N N 491 THR CB C N R 492 THR OG1 O N N 493 THR CG2 C N N 494 THR OXT O N N 495 THR H H N N 496 THR H2 H N N 497 THR HA H N N 498 THR HB H N N 499 THR HG1 H N N 500 THR HG21 H N N 501 THR HG22 H N N 502 THR HG23 H N N 503 THR HXT H N N 504 TRP N N N N 505 TRP CA C N S 506 TRP C C N N 507 TRP O O N N 508 TRP CB C N N 509 TRP CG C Y N 510 TRP CD1 C Y N 511 TRP CD2 C Y N 512 TRP NE1 N Y N 513 TRP CE2 C Y N 514 TRP CE3 C Y N 515 TRP CZ2 C Y N 516 TRP CZ3 C Y N 517 TRP CH2 C Y N 518 TRP OXT O N N 519 TRP H H N N 520 TRP H2 H N N 521 TRP HA H N N 522 TRP HB2 H N N 523 TRP HB3 H N N 524 TRP HD1 H N N 525 TRP HE1 H N N 526 TRP HE3 H N N 527 TRP HZ2 H N N 528 TRP HZ3 H N N 529 TRP HH2 H N N 530 TRP HXT H N N 531 TYR N N N N 532 TYR CA C N S 533 TYR C C N N 534 TYR O O N N 535 TYR CB C N N 536 TYR CG C Y N 537 TYR CD1 C Y N 538 TYR CD2 C Y N 539 TYR CE1 C Y N 540 TYR CE2 C Y N 541 TYR CZ C Y N 542 TYR OH O N N 543 TYR OXT O N N 544 TYR H H N N 545 TYR H2 H N N 546 TYR HA H N N 547 TYR HB2 H N N 548 TYR HB3 H N N 549 TYR HD1 H N N 550 TYR HD2 H N N 551 TYR HE1 H N N 552 TYR HE2 H N N 553 TYR HH H N N 554 TYR HXT H N N 555 VAL N N N N 556 VAL CA C N S 557 VAL C C N N 558 VAL O O N N 559 VAL CB C N N 560 VAL CG1 C N N 561 VAL CG2 C N N 562 VAL OXT O N N 563 VAL H H N N 564 VAL H2 H N N 565 VAL HA H N N 566 VAL HB H N N 567 VAL HG11 H N N 568 VAL HG12 H N N 569 VAL HG13 H N N 570 VAL HG21 H N N 571 VAL HG22 H N N 572 VAL HG23 H N N 573 VAL HXT H N N 574 ZN ZN ZN N N 575 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 6MA OP3 P sing N N 1 6MA OP3 HOP3 sing N N 2 6MA P OP1 doub N N 3 6MA P OP2 sing N N 4 6MA P "O5'" sing N N 5 6MA OP2 HOP2 sing N N 6 6MA "O5'" "C5'" sing N N 7 6MA "C5'" "C4'" sing N N 8 6MA "C5'" "H5'" sing N N 9 6MA "C5'" "H5''" sing N N 10 6MA "C4'" "O4'" sing N N 11 6MA "C4'" "C3'" sing N N 12 6MA "C4'" "H4'" sing N N 13 6MA "O4'" "C1'" sing N N 14 6MA "C3'" "O3'" sing N N 15 6MA "C3'" "C2'" sing N N 16 6MA "C3'" "H3'" sing N N 17 6MA "O3'" "HO3'" sing N N 18 6MA "C2'" "C1'" sing N N 19 6MA "C2'" "H2'" sing N N 20 6MA "C2'" "H2''" sing N N 21 6MA "C1'" N9 sing N N 22 6MA "C1'" "H1'" sing N N 23 6MA N9 C8 sing Y N 24 6MA N9 C4 sing Y N 25 6MA C8 N7 doub Y N 26 6MA C8 H8 sing N N 27 6MA N7 C5 sing Y N 28 6MA C5 C6 sing Y N 29 6MA C5 C4 doub Y N 30 6MA C6 N1 doub Y N 31 6MA C6 N6 sing N N 32 6MA N1 C2 sing Y N 33 6MA C2 N3 doub Y N 34 6MA C2 H2 sing N N 35 6MA N3 C4 sing Y N 36 6MA N6 C1 sing N N 37 6MA N6 H61 sing N N 38 6MA C1 H11 sing N N 39 6MA C1 H12 sing N N 40 6MA C1 H13 sing N N 41 ALA N CA sing N N 42 ALA N H sing N N 43 ALA N H2 sing N N 44 ALA CA C sing N N 45 ALA CA CB sing N N 46 ALA CA HA sing N N 47 ALA C O doub N N 48 ALA C OXT sing N N 49 ALA CB HB1 sing N N 50 ALA CB HB2 sing N N 51 ALA CB HB3 sing N N 52 ALA OXT HXT sing N N 53 ARG N CA sing N N 54 ARG N H sing N N 55 ARG N H2 sing N N 56 ARG CA C sing N N 57 ARG CA CB sing N N 58 ARG CA HA sing N N 59 ARG C O doub N N 60 ARG C OXT sing N N 61 ARG CB CG sing N N 62 ARG CB HB2 sing N N 63 ARG CB HB3 sing N N 64 ARG CG CD sing N N 65 ARG CG HG2 sing N N 66 ARG CG HG3 sing N N 67 ARG CD NE sing N N 68 ARG CD HD2 sing N N 69 ARG CD HD3 sing N N 70 ARG NE CZ sing N N 71 ARG NE HE sing N N 72 ARG CZ NH1 sing N N 73 ARG CZ NH2 doub N N 74 ARG NH1 HH11 sing N N 75 ARG NH1 HH12 sing N N 76 ARG NH2 HH21 sing N N 77 ARG NH2 HH22 sing N N 78 ARG OXT HXT sing N N 79 ASN N CA sing N N 80 ASN N H sing N N 81 ASN N H2 sing N N 82 ASN CA C sing N N 83 ASN CA CB sing N N 84 ASN CA HA sing N N 85 ASN C O doub N N 86 ASN C OXT sing N N 87 ASN CB CG sing N N 88 ASN CB HB2 sing N N 89 ASN CB HB3 sing N N 90 ASN CG OD1 doub N N 91 ASN CG ND2 sing N N 92 ASN ND2 HD21 sing N N 93 ASN ND2 HD22 sing N N 94 ASN OXT HXT sing N N 95 ASP N CA sing N N 96 ASP N H sing N N 97 ASP N H2 sing N N 98 ASP CA C sing N N 99 ASP CA CB sing N N 100 ASP CA HA sing N N 101 ASP C O doub N N 102 ASP C OXT sing N N 103 ASP CB CG sing N N 104 ASP CB HB2 sing N N 105 ASP CB HB3 sing N N 106 ASP CG OD1 doub N N 107 ASP CG OD2 sing N N 108 ASP OD2 HD2 sing N N 109 ASP OXT HXT sing N N 110 CYS N CA sing N N 111 CYS N H sing N N 112 CYS N H2 sing N N 113 CYS CA C sing N N 114 CYS CA CB sing N N 115 CYS CA HA sing N N 116 CYS C O doub N N 117 CYS C OXT sing N N 118 CYS CB SG sing N N 119 CYS CB HB2 sing N N 120 CYS CB HB3 sing N N 121 CYS SG HG sing N N 122 CYS OXT HXT sing N N 123 DA OP3 P sing N N 124 DA OP3 HOP3 sing N N 125 DA P OP1 doub N N 126 DA P OP2 sing N N 127 DA P "O5'" sing N N 128 DA OP2 HOP2 sing N N 129 DA "O5'" "C5'" sing N N 130 DA "C5'" "C4'" sing N N 131 DA "C5'" "H5'" sing N N 132 DA "C5'" "H5''" sing N N 133 DA "C4'" "O4'" sing N N 134 DA "C4'" "C3'" sing N N 135 DA "C4'" "H4'" sing N N 136 DA "O4'" "C1'" sing N N 137 DA "C3'" "O3'" sing N N 138 DA "C3'" "C2'" sing N N 139 DA "C3'" "H3'" sing N N 140 DA "O3'" "HO3'" sing N N 141 DA "C2'" "C1'" sing N N 142 DA "C2'" "H2'" sing N N 143 DA "C2'" "H2''" sing N N 144 DA "C1'" N9 sing N N 145 DA "C1'" "H1'" sing N N 146 DA N9 C8 sing Y N 147 DA N9 C4 sing Y N 148 DA C8 N7 doub Y N 149 DA C8 H8 sing N N 150 DA N7 C5 sing Y N 151 DA C5 C6 sing Y N 152 DA C5 C4 doub Y N 153 DA C6 N6 sing N N 154 DA C6 N1 doub Y N 155 DA N6 H61 sing N N 156 DA N6 H62 sing N N 157 DA N1 C2 sing Y N 158 DA C2 N3 doub Y N 159 DA C2 H2 sing N N 160 DA N3 C4 sing Y N 161 DC OP3 P sing N N 162 DC OP3 HOP3 sing N N 163 DC P OP1 doub N N 164 DC P OP2 sing N N 165 DC P "O5'" sing N N 166 DC OP2 HOP2 sing N N 167 DC "O5'" "C5'" sing N N 168 DC "C5'" "C4'" sing N N 169 DC "C5'" "H5'" sing N N 170 DC "C5'" "H5''" sing N N 171 DC "C4'" "O4'" sing N N 172 DC "C4'" "C3'" sing N N 173 DC "C4'" "H4'" sing N N 174 DC "O4'" "C1'" sing N N 175 DC "C3'" "O3'" sing N N 176 DC "C3'" "C2'" sing N N 177 DC "C3'" "H3'" sing N N 178 DC "O3'" "HO3'" sing N N 179 DC "C2'" "C1'" sing N N 180 DC "C2'" "H2'" sing N N 181 DC "C2'" "H2''" sing N N 182 DC "C1'" N1 sing N N 183 DC "C1'" "H1'" sing N N 184 DC N1 C2 sing N N 185 DC N1 C6 sing N N 186 DC C2 O2 doub N N 187 DC C2 N3 sing N N 188 DC N3 C4 doub N N 189 DC C4 N4 sing N N 190 DC C4 C5 sing N N 191 DC N4 H41 sing N N 192 DC N4 H42 sing N N 193 DC C5 C6 doub N N 194 DC C5 H5 sing N N 195 DC C6 H6 sing N N 196 DG OP3 P sing N N 197 DG OP3 HOP3 sing N N 198 DG P OP1 doub N N 199 DG P OP2 sing N N 200 DG P "O5'" sing N N 201 DG OP2 HOP2 sing N N 202 DG "O5'" "C5'" sing N N 203 DG "C5'" "C4'" sing N N 204 DG "C5'" "H5'" sing N N 205 DG "C5'" "H5''" sing N N 206 DG "C4'" "O4'" sing N N 207 DG "C4'" "C3'" sing N N 208 DG "C4'" "H4'" sing N N 209 DG "O4'" "C1'" sing N N 210 DG "C3'" "O3'" sing N N 211 DG "C3'" "C2'" sing N N 212 DG "C3'" "H3'" sing N N 213 DG "O3'" "HO3'" sing N N 214 DG "C2'" "C1'" sing N N 215 DG "C2'" "H2'" sing N N 216 DG "C2'" "H2''" sing N N 217 DG "C1'" N9 sing N N 218 DG "C1'" "H1'" sing N N 219 DG N9 C8 sing Y N 220 DG N9 C4 sing Y N 221 DG C8 N7 doub Y N 222 DG C8 H8 sing N N 223 DG N7 C5 sing Y N 224 DG C5 C6 sing N N 225 DG C5 C4 doub Y N 226 DG C6 O6 doub N N 227 DG C6 N1 sing N N 228 DG N1 C2 sing N N 229 DG N1 H1 sing N N 230 DG C2 N2 sing N N 231 DG C2 N3 doub N N 232 DG N2 H21 sing N N 233 DG N2 H22 sing N N 234 DG N3 C4 sing N N 235 DT OP3 P sing N N 236 DT OP3 HOP3 sing N N 237 DT P OP1 doub N N 238 DT P OP2 sing N N 239 DT P "O5'" sing N N 240 DT OP2 HOP2 sing N N 241 DT "O5'" "C5'" sing N N 242 DT "C5'" "C4'" sing N N 243 DT "C5'" "H5'" sing N N 244 DT "C5'" "H5''" sing N N 245 DT "C4'" "O4'" sing N N 246 DT "C4'" "C3'" sing N N 247 DT "C4'" "H4'" sing N N 248 DT "O4'" "C1'" sing N N 249 DT "C3'" "O3'" sing N N 250 DT "C3'" "C2'" sing N N 251 DT "C3'" "H3'" sing N N 252 DT "O3'" "HO3'" sing N N 253 DT "C2'" "C1'" sing N N 254 DT "C2'" "H2'" sing N N 255 DT "C2'" "H2''" sing N N 256 DT "C1'" N1 sing N N 257 DT "C1'" "H1'" sing N N 258 DT N1 C2 sing N N 259 DT N1 C6 sing N N 260 DT C2 O2 doub N N 261 DT C2 N3 sing N N 262 DT N3 C4 sing N N 263 DT N3 H3 sing N N 264 DT C4 O4 doub N N 265 DT C4 C5 sing N N 266 DT C5 C7 sing N N 267 DT C5 C6 doub N N 268 DT C7 H71 sing N N 269 DT C7 H72 sing N N 270 DT C7 H73 sing N N 271 DT C6 H6 sing N N 272 GLN N CA sing N N 273 GLN N H sing N N 274 GLN N H2 sing N N 275 GLN CA C sing N N 276 GLN CA CB sing N N 277 GLN CA HA sing N N 278 GLN C O doub N N 279 GLN C OXT sing N N 280 GLN CB CG sing N N 281 GLN CB HB2 sing N N 282 GLN CB HB3 sing N N 283 GLN CG CD sing N N 284 GLN CG HG2 sing N N 285 GLN CG HG3 sing N N 286 GLN CD OE1 doub N N 287 GLN CD NE2 sing N N 288 GLN NE2 HE21 sing N N 289 GLN NE2 HE22 sing N N 290 GLN OXT HXT sing N N 291 GLU N CA sing N N 292 GLU N H sing N N 293 GLU N H2 sing N N 294 GLU CA C sing N N 295 GLU CA CB sing N N 296 GLU CA HA sing N N 297 GLU C O doub N N 298 GLU C OXT sing N N 299 GLU CB CG sing N N 300 GLU CB HB2 sing N N 301 GLU CB HB3 sing N N 302 GLU CG CD sing N N 303 GLU CG HG2 sing N N 304 GLU CG HG3 sing N N 305 GLU CD OE1 doub N N 306 GLU CD OE2 sing N N 307 GLU OE2 HE2 sing N N 308 GLU OXT HXT sing N N 309 GLY N CA sing N N 310 GLY N H sing N N 311 GLY N H2 sing N N 312 GLY CA C sing N N 313 GLY CA HA2 sing N N 314 GLY CA HA3 sing N N 315 GLY C O doub N N 316 GLY C OXT sing N N 317 GLY OXT HXT sing N N 318 HIS N CA sing N N 319 HIS N H sing N N 320 HIS N H2 sing N N 321 HIS CA C sing N N 322 HIS CA CB sing N N 323 HIS CA HA sing N N 324 HIS C O doub N N 325 HIS C OXT sing N N 326 HIS CB CG sing N N 327 HIS CB HB2 sing N N 328 HIS CB HB3 sing N N 329 HIS CG ND1 sing Y N 330 HIS CG CD2 doub Y N 331 HIS ND1 CE1 doub Y N 332 HIS ND1 HD1 sing N N 333 HIS CD2 NE2 sing Y N 334 HIS CD2 HD2 sing N N 335 HIS CE1 NE2 sing Y N 336 HIS CE1 HE1 sing N N 337 HIS NE2 HE2 sing N N 338 HIS OXT HXT sing N N 339 HOH O H1 sing N N 340 HOH O H2 sing N N 341 ILE N CA sing N N 342 ILE N H sing N N 343 ILE N H2 sing N N 344 ILE CA C sing N N 345 ILE CA CB sing N N 346 ILE CA HA sing N N 347 ILE C O doub N N 348 ILE C OXT sing N N 349 ILE CB CG1 sing N N 350 ILE CB CG2 sing N N 351 ILE CB HB sing N N 352 ILE CG1 CD1 sing N N 353 ILE CG1 HG12 sing N N 354 ILE CG1 HG13 sing N N 355 ILE CG2 HG21 sing N N 356 ILE CG2 HG22 sing N N 357 ILE CG2 HG23 sing N N 358 ILE CD1 HD11 sing N N 359 ILE CD1 HD12 sing N N 360 ILE CD1 HD13 sing N N 361 ILE OXT HXT sing N N 362 LEU N CA sing N N 363 LEU N H sing N N 364 LEU N H2 sing N N 365 LEU CA C sing N N 366 LEU CA CB sing N N 367 LEU CA HA sing N N 368 LEU C O doub N N 369 LEU C OXT sing N N 370 LEU CB CG sing N N 371 LEU CB HB2 sing N N 372 LEU CB HB3 sing N N 373 LEU CG CD1 sing N N 374 LEU CG CD2 sing N N 375 LEU CG HG sing N N 376 LEU CD1 HD11 sing N N 377 LEU CD1 HD12 sing N N 378 LEU CD1 HD13 sing N N 379 LEU CD2 HD21 sing N N 380 LEU CD2 HD22 sing N N 381 LEU CD2 HD23 sing N N 382 LEU OXT HXT sing N N 383 LYS N CA sing N N 384 LYS N H sing N N 385 LYS N H2 sing N N 386 LYS CA C sing N N 387 LYS CA CB sing N N 388 LYS CA HA sing N N 389 LYS C O doub N N 390 LYS C OXT sing N N 391 LYS CB CG sing N N 392 LYS CB HB2 sing N N 393 LYS CB HB3 sing N N 394 LYS CG CD sing N N 395 LYS CG HG2 sing N N 396 LYS CG HG3 sing N N 397 LYS CD CE sing N N 398 LYS CD HD2 sing N N 399 LYS CD HD3 sing N N 400 LYS CE NZ sing N N 401 LYS CE HE2 sing N N 402 LYS CE HE3 sing N N 403 LYS NZ HZ1 sing N N 404 LYS NZ HZ2 sing N N 405 LYS NZ HZ3 sing N N 406 LYS OXT HXT sing N N 407 MET N CA sing N N 408 MET N H sing N N 409 MET N H2 sing N N 410 MET CA C sing N N 411 MET CA CB sing N N 412 MET CA HA sing N N 413 MET C O doub N N 414 MET C OXT sing N N 415 MET CB CG sing N N 416 MET CB HB2 sing N N 417 MET CB HB3 sing N N 418 MET CG SD sing N N 419 MET CG HG2 sing N N 420 MET CG HG3 sing N N 421 MET SD CE sing N N 422 MET CE HE1 sing N N 423 MET CE HE2 sing N N 424 MET CE HE3 sing N N 425 MET OXT HXT sing N N 426 PHE N CA sing N N 427 PHE N H sing N N 428 PHE N H2 sing N N 429 PHE CA C sing N N 430 PHE CA CB sing N N 431 PHE CA HA sing N N 432 PHE C O doub N N 433 PHE C OXT sing N N 434 PHE CB CG sing N N 435 PHE CB HB2 sing N N 436 PHE CB HB3 sing N N 437 PHE CG CD1 doub Y N 438 PHE CG CD2 sing Y N 439 PHE CD1 CE1 sing Y N 440 PHE CD1 HD1 sing N N 441 PHE CD2 CE2 doub Y N 442 PHE CD2 HD2 sing N N 443 PHE CE1 CZ doub Y N 444 PHE CE1 HE1 sing N N 445 PHE CE2 CZ sing Y N 446 PHE CE2 HE2 sing N N 447 PHE CZ HZ sing N N 448 PHE OXT HXT sing N N 449 PRO N CA sing N N 450 PRO N CD sing N N 451 PRO N H sing N N 452 PRO CA C sing N N 453 PRO CA CB sing N N 454 PRO CA HA sing N N 455 PRO C O doub N N 456 PRO C OXT sing N N 457 PRO CB CG sing N N 458 PRO CB HB2 sing N N 459 PRO CB HB3 sing N N 460 PRO CG CD sing N N 461 PRO CG HG2 sing N N 462 PRO CG HG3 sing N N 463 PRO CD HD2 sing N N 464 PRO CD HD3 sing N N 465 PRO OXT HXT sing N N 466 SER N CA sing N N 467 SER N H sing N N 468 SER N H2 sing N N 469 SER CA C sing N N 470 SER CA CB sing N N 471 SER CA HA sing N N 472 SER C O doub N N 473 SER C OXT sing N N 474 SER CB OG sing N N 475 SER CB HB2 sing N N 476 SER CB HB3 sing N N 477 SER OG HG sing N N 478 SER OXT HXT sing N N 479 THR N CA sing N N 480 THR N H sing N N 481 THR N H2 sing N N 482 THR CA C sing N N 483 THR CA CB sing N N 484 THR CA HA sing N N 485 THR C O doub N N 486 THR C OXT sing N N 487 THR CB OG1 sing N N 488 THR CB CG2 sing N N 489 THR CB HB sing N N 490 THR OG1 HG1 sing N N 491 THR CG2 HG21 sing N N 492 THR CG2 HG22 sing N N 493 THR CG2 HG23 sing N N 494 THR OXT HXT sing N N 495 TRP N CA sing N N 496 TRP N H sing N N 497 TRP N H2 sing N N 498 TRP CA C sing N N 499 TRP CA CB sing N N 500 TRP CA HA sing N N 501 TRP C O doub N N 502 TRP C OXT sing N N 503 TRP CB CG sing N N 504 TRP CB HB2 sing N N 505 TRP CB HB3 sing N N 506 TRP CG CD1 doub Y N 507 TRP CG CD2 sing Y N 508 TRP CD1 NE1 sing Y N 509 TRP CD1 HD1 sing N N 510 TRP CD2 CE2 doub Y N 511 TRP CD2 CE3 sing Y N 512 TRP NE1 CE2 sing Y N 513 TRP NE1 HE1 sing N N 514 TRP CE2 CZ2 sing Y N 515 TRP CE3 CZ3 doub Y N 516 TRP CE3 HE3 sing N N 517 TRP CZ2 CH2 doub Y N 518 TRP CZ2 HZ2 sing N N 519 TRP CZ3 CH2 sing Y N 520 TRP CZ3 HZ3 sing N N 521 TRP CH2 HH2 sing N N 522 TRP OXT HXT sing N N 523 TYR N CA sing N N 524 TYR N H sing N N 525 TYR N H2 sing N N 526 TYR CA C sing N N 527 TYR CA CB sing N N 528 TYR CA HA sing N N 529 TYR C O doub N N 530 TYR C OXT sing N N 531 TYR CB CG sing N N 532 TYR CB HB2 sing N N 533 TYR CB HB3 sing N N 534 TYR CG CD1 doub Y N 535 TYR CG CD2 sing Y N 536 TYR CD1 CE1 sing Y N 537 TYR CD1 HD1 sing N N 538 TYR CD2 CE2 doub Y N 539 TYR CD2 HD2 sing N N 540 TYR CE1 CZ doub Y N 541 TYR CE1 HE1 sing N N 542 TYR CE2 CZ sing Y N 543 TYR CE2 HE2 sing N N 544 TYR CZ OH sing N N 545 TYR OH HH sing N N 546 TYR OXT HXT sing N N 547 VAL N CA sing N N 548 VAL N H sing N N 549 VAL N H2 sing N N 550 VAL CA C sing N N 551 VAL CA CB sing N N 552 VAL CA HA sing N N 553 VAL C O doub N N 554 VAL C OXT sing N N 555 VAL CB CG1 sing N N 556 VAL CB CG2 sing N N 557 VAL CB HB sing N N 558 VAL CG1 HG11 sing N N 559 VAL CG1 HG12 sing N N 560 VAL CG1 HG13 sing N N 561 VAL CG2 HG21 sing N N 562 VAL CG2 HG22 sing N N 563 VAL CG2 HG23 sing N N 564 VAL OXT HXT sing N N 565 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4KYW 'double helix' 4KYW 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DC 1 1_555 C DG 10 1_555 0.191 -0.246 0.477 -16.534 -9.384 -0.640 1 C_DC1:DG10_D C 1 ? D 10 ? 19 1 1 B DT 2 1_555 C DA 9 1_555 -0.358 -0.186 0.074 -6.035 4.859 1.133 2 C_DT2:DA9_D C 2 ? D 9 ? 20 1 1 B DG 3 1_555 C DC 8 1_555 -0.171 -0.088 0.059 12.238 3.322 -0.626 3 C_DG3:DC8_D C 3 ? D 8 ? 19 1 1 B DG 4 1_555 C DC 7 1_555 -0.265 -0.075 0.041 -2.402 -12.333 1.272 4 C_DG4:DC7_D C 4 ? D 7 ? 19 1 1 B 6MA 5 1_555 C DT 6 1_555 0.391 -0.067 -0.287 -18.631 -14.123 9.111 5 C_6MA5:DT6_D C 5 ? D 6 ? 20 1 1 B DT 6 1_555 C 6MA 5 1_555 -0.063 -0.256 -0.129 -9.755 -0.898 8.910 6 C_DT6:6MA5_D C 6 ? D 5 ? 20 1 1 B DC 7 1_555 C DG 4 1_555 0.268 -0.346 -0.597 13.111 25.509 -0.854 7 C_DC7:DG4_D C 7 ? D 4 ? 19 1 1 B DC 8 1_555 C DG 3 1_555 -0.136 -0.013 0.283 -2.771 -7.565 -2.334 8 C_DC8:DG3_D C 8 ? D 3 ? 19 1 1 B DA 9 1_555 C DT 2 1_555 0.367 -0.132 0.105 4.833 -11.848 2.202 9 C_DA9:DT2_D C 9 ? D 2 ? 20 1 1 B DG 10 1_555 C DC 1 1_555 0.124 -0.320 -0.178 5.215 -10.534 -0.146 10 C_DG10:DC1_D C 10 ? D 1 ? 19 1 1 D DC 1 1_555 E DG 10 1_555 0.103 -0.263 0.247 -11.937 -5.318 0.535 11 E_DC1:DG10_F E 1 ? F 10 ? 19 1 1 D DT 2 1_555 E DA 9 1_555 -0.383 -0.179 -0.016 2.093 -2.150 2.626 12 E_DT2:DA9_F E 2 ? F 9 ? 20 1 1 D DG 3 1_555 E DC 8 1_555 -0.239 -0.234 0.232 1.200 -4.320 -4.792 13 E_DG3:DC8_F E 3 ? F 8 ? 19 1 1 D DG 4 1_555 E DC 7 1_555 0.509 -0.283 -0.027 2.729 -6.153 -1.012 14 E_DG4:DC7_F E 4 ? F 7 ? 19 1 1 D 6MA 5 1_555 E DT 6 1_555 0.354 -0.177 -0.247 -2.667 -2.337 4.800 15 E_6MA5:DT6_F E 5 ? F 6 ? 20 1 1 D DT 6 1_555 E 6MA 5 1_555 -0.218 -0.136 0.024 -3.897 -3.772 4.157 16 E_DT6:6MA5_F E 6 ? F 5 ? 20 1 1 D DC 7 1_555 E DG 4 1_555 0.459 -0.028 0.082 -5.024 -3.761 2.258 17 E_DC7:DG4_F E 7 ? F 4 ? 19 1 1 D DC 8 1_555 E DG 3 1_555 0.028 -0.114 -0.374 7.674 4.629 -0.603 18 E_DC8:DG3_F E 8 ? F 3 ? 19 1 1 D DA 9 1_555 E DT 2 1_555 0.296 -0.204 0.136 13.502 -17.145 0.868 19 E_DA9:DT2_F E 9 ? F 2 ? 20 1 1 D DG 10 1_555 E DC 1 1_555 -0.010 -0.388 0.558 15.690 -10.519 -5.033 20 E_DG10:DC1_F E 10 ? F 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DC 1 1_555 C DG 10 1_555 B DT 2 1_555 C DA 9 1_555 0.889 0.079 3.112 7.638 4.057 33.897 -0.472 -0.346 3.219 6.822 -12.843 34.952 1 CC_DC1DT2:DA9DG10_DD C 1 ? D 10 ? C 2 ? D 9 ? 1 B DT 2 1_555 C DA 9 1_555 B DG 3 1_555 C DC 8 1_555 0.373 -0.186 3.010 1.009 2.528 27.481 -0.956 -0.556 2.993 5.305 -2.116 27.613 2 CC_DT2DG3:DC8DA9_DD C 2 ? D 9 ? C 3 ? D 8 ? 1 B DG 3 1_555 C DC 8 1_555 B DG 4 1_555 C DC 7 1_555 0.032 -0.782 3.751 -2.559 -1.812 36.344 -0.960 -0.459 3.774 -2.898 4.093 36.474 3 CC_DG3DG4:DC7DC8_DD C 3 ? D 8 ? C 4 ? D 7 ? 1 B DG 4 1_555 C DC 7 1_555 B 6MA 5 1_555 C DT 6 1_555 0.181 -1.448 3.643 1.876 8.686 36.835 -3.422 -0.022 3.236 13.506 -2.917 37.855 4 CC_DG46MA5:DT6DC7_DD C 4 ? D 7 ? C 5 ? D 6 ? 1 B 6MA 5 1_555 C DT 6 1_555 B DT 6 1_555 C 6MA 5 1_555 -0.435 -0.944 3.166 1.704 4.283 30.782 -2.534 1.118 2.982 8.013 -3.187 31.117 5 CC_6MA5DT6:6MA5DT6_DD C 5 ? D 6 ? C 6 ? D 5 ? 1 B DT 6 1_555 C 6MA 5 1_555 B DC 7 1_555 C DG 4 1_555 0.471 0.405 3.286 2.707 6.760 26.031 -0.901 -0.300 3.314 14.647 -5.865 27.013 6 CC_DT6DC7:DG46MA5_DD C 6 ? D 5 ? C 7 ? D 4 ? 1 B DC 7 1_555 C DG 4 1_555 B DC 8 1_555 C DG 3 1_555 -0.285 -0.185 4.739 -2.768 -26.896 32.899 3.858 -0.029 3.848 -40.122 4.129 42.345 7 CC_DC7DC8:DG3DG4_DD C 7 ? D 4 ? C 8 ? D 3 ? 1 B DC 8 1_555 C DG 3 1_555 B DA 9 1_555 C DT 2 1_555 0.608 0.509 3.142 2.635 8.279 37.333 -0.246 -0.601 3.212 12.723 -4.050 38.296 8 CC_DC8DA9:DT2DG3_DD C 8 ? D 3 ? C 9 ? D 2 ? 1 B DA 9 1_555 C DT 2 1_555 B DG 10 1_555 C DC 1 1_555 0.167 0.263 3.361 2.947 9.183 28.631 -1.445 0.305 3.287 17.938 -5.757 30.179 9 CC_DA9DG10:DC1DT2_DD C 9 ? D 2 ? C 10 ? D 1 ? 1 D DC 1 1_555 E DG 10 1_555 D DT 2 1_555 E DA 9 1_555 0.127 0.252 3.018 1.929 2.476 26.915 -0.044 0.182 3.030 5.297 -4.127 27.094 10 EE_DC1DT2:DA9DG10_FF E 1 ? F 10 ? E 2 ? F 9 ? 1 D DT 2 1_555 E DA 9 1_555 D DG 3 1_555 E DC 8 1_555 -0.220 0.263 3.356 -4.388 0.544 40.651 0.316 -0.181 3.364 0.780 6.294 40.881 11 EE_DT2DG3:DC8DA9_FF E 2 ? F 9 ? E 3 ? F 8 ? 1 D DG 3 1_555 E DC 8 1_555 D DG 4 1_555 E DC 7 1_555 0.116 -0.431 3.333 1.769 0.678 40.133 -0.706 0.037 3.327 0.988 -2.577 40.176 12 EE_DG3DG4:DC7DC8_FF E 3 ? F 8 ? E 4 ? F 7 ? 1 D DG 4 1_555 E DC 7 1_555 D 6MA 5 1_555 E DT 6 1_555 0.332 -0.939 3.647 0.759 -6.433 32.849 -0.416 -0.433 3.765 -11.240 -1.326 33.465 13 EE_DG46MA5:DT6DC7_FF E 4 ? F 7 ? E 5 ? F 6 ? 1 D 6MA 5 1_555 E DT 6 1_555 D DT 6 1_555 E 6MA 5 1_555 -0.369 -1.338 3.486 -1.517 -3.221 27.572 -1.940 0.370 3.630 -6.722 3.165 27.796 14 EE_6MA5DT6:6MA5DT6_FF E 5 ? F 6 ? E 6 ? F 5 ? 1 D DT 6 1_555 E 6MA 5 1_555 D DC 7 1_555 E DG 4 1_555 -0.198 -0.754 3.375 -0.877 -4.556 38.829 -0.555 0.186 3.442 -6.824 1.313 39.094 15 EE_DT6DC7:DG46MA5_FF E 6 ? F 5 ? E 7 ? F 4 ? 1 D DC 7 1_555 E DG 4 1_555 D DC 8 1_555 E DG 3 1_555 0.332 0.128 3.150 3.763 0.925 31.393 0.070 0.065 3.169 1.701 -6.920 31.625 16 EE_DC7DC8:DG3DG4_FF E 7 ? F 4 ? E 8 ? F 3 ? 1 D DC 8 1_555 E DG 3 1_555 D DA 9 1_555 E DT 2 1_555 -0.877 1.446 3.231 -2.252 -3.415 43.852 2.243 0.962 3.154 -4.560 3.008 44.033 17 EE_DC8DA9:DT2DG3_FF E 8 ? F 3 ? E 9 ? F 2 ? 1 D DA 9 1_555 E DT 2 1_555 D DG 10 1_555 E DC 1 1_555 0.803 0.123 3.241 -5.404 -1.942 32.884 0.526 -2.269 3.062 -3.399 9.456 33.368 18 EE_DA9DG10:DC1DT2_FF E 9 ? F 2 ? E 10 ? F 1 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'ZINC ION' ZN 4 'CALCIUM ION' CA 5 'SODIUM ION' NA 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4ESJ _pdbx_initial_refinement_model.details 'PDB ENTRY 4ESJ' #