data_4L12 # _entry.id 4L12 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.382 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4L12 pdb_00004l12 10.2210/pdb4l12/pdb RCSB RCSB080046 ? ? WWPDB D_1000080046 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4L13 . unspecified PDB 4L1I . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4L12 _pdbx_database_status.recvd_initial_deposition_date 2013-06-01 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Zhang, Y.' 1 'Weber, I.T.' 2 # _citation.id primary _citation.title 'Structural basis for a hand-like site in the calcium sensor CatchER with fast kinetics.' _citation.journal_abbrev 'Acta Crystallogr.,Sect.D' _citation.journal_volume 69 _citation.page_first 2309 _citation.page_last 2319 _citation.year 2013 _citation.journal_id_ASTM ABCRE6 _citation.country DK _citation.journal_id_ISSN 0907-4449 _citation.journal_id_CSD 0766 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24311573 _citation.pdbx_database_id_DOI 10.1107/S0907444913021306 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zhang, Y.' 1 ? primary 'Reddish, F.' 2 ? primary 'Tang, S.' 3 ? primary 'Zhuo, Y.' 4 ? primary 'Wang, Y.F.' 5 ? primary 'Yang, J.J.' 6 ? primary 'Weber, I.T.' 7 ? # _cell.entry_id 4L12 _cell.length_a 61.062 _cell.length_b 88.334 _cell.length_c 118.167 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4L12 _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'EGFP-based Calcium Sensor CatchER' 26141.316 1 ? 'F64L, S65T, S147E, M153T, V163A, S202D, Q204E, F223E, T225E' 'SEE REMARK 999' ? 2 non-polymer syn 'GADOLINIUM ATOM' 157.250 2 ? ? ? ? 3 water nat water 18.015 138 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Green fluorescent protein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;MVSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLKFICTTGKLPVPWPTLVTTL(CRO)VQCFSRYPDH MKQHDFFKSAMPEGYVQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNEHNVYITADKQ KNGIKANFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLDTESALSKDPNEKRDHMVLLEEVEAAGITL ; _entity_poly.pdbx_seq_one_letter_code_can ;MVSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLKFICTTGKLPVPWPTLVTTLTYGVQCFSRYPDHMK QHDFFKSAMPEGYVQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNEHNVYITADKQKN GIKANFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLDTESALSKDPNEKRDHMVLLEEVEAAGITL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 VAL n 1 3 SER n 1 4 LYS n 1 5 GLY n 1 6 GLU n 1 7 GLU n 1 8 LEU n 1 9 PHE n 1 10 THR n 1 11 GLY n 1 12 VAL n 1 13 VAL n 1 14 PRO n 1 15 ILE n 1 16 LEU n 1 17 VAL n 1 18 GLU n 1 19 LEU n 1 20 ASP n 1 21 GLY n 1 22 ASP n 1 23 VAL n 1 24 ASN n 1 25 GLY n 1 26 HIS n 1 27 LYS n 1 28 PHE n 1 29 SER n 1 30 VAL n 1 31 SER n 1 32 GLY n 1 33 GLU n 1 34 GLY n 1 35 GLU n 1 36 GLY n 1 37 ASP n 1 38 ALA n 1 39 THR n 1 40 TYR n 1 41 GLY n 1 42 LYS n 1 43 LEU n 1 44 THR n 1 45 LEU n 1 46 LYS n 1 47 PHE n 1 48 ILE n 1 49 CYS n 1 50 THR n 1 51 THR n 1 52 GLY n 1 53 LYS n 1 54 LEU n 1 55 PRO n 1 56 VAL n 1 57 PRO n 1 58 TRP n 1 59 PRO n 1 60 THR n 1 61 LEU n 1 62 VAL n 1 63 THR n 1 64 THR n 1 65 LEU n 1 66 CRO n 1 67 VAL n 1 68 GLN n 1 69 CYS n 1 70 PHE n 1 71 SER n 1 72 ARG n 1 73 TYR n 1 74 PRO n 1 75 ASP n 1 76 HIS n 1 77 MET n 1 78 LYS n 1 79 GLN n 1 80 HIS n 1 81 ASP n 1 82 PHE n 1 83 PHE n 1 84 LYS n 1 85 SER n 1 86 ALA n 1 87 MET n 1 88 PRO n 1 89 GLU n 1 90 GLY n 1 91 TYR n 1 92 VAL n 1 93 GLN n 1 94 GLU n 1 95 ARG n 1 96 THR n 1 97 ILE n 1 98 PHE n 1 99 PHE n 1 100 LYS n 1 101 ASP n 1 102 ASP n 1 103 GLY n 1 104 ASN n 1 105 TYR n 1 106 LYS n 1 107 THR n 1 108 ARG n 1 109 ALA n 1 110 GLU n 1 111 VAL n 1 112 LYS n 1 113 PHE n 1 114 GLU n 1 115 GLY n 1 116 ASP n 1 117 THR n 1 118 LEU n 1 119 VAL n 1 120 ASN n 1 121 ARG n 1 122 ILE n 1 123 GLU n 1 124 LEU n 1 125 LYS n 1 126 GLY n 1 127 ILE n 1 128 ASP n 1 129 PHE n 1 130 LYS n 1 131 GLU n 1 132 ASP n 1 133 GLY n 1 134 ASN n 1 135 ILE n 1 136 LEU n 1 137 GLY n 1 138 HIS n 1 139 LYS n 1 140 LEU n 1 141 GLU n 1 142 TYR n 1 143 ASN n 1 144 TYR n 1 145 ASN n 1 146 GLU n 1 147 HIS n 1 148 ASN n 1 149 VAL n 1 150 TYR n 1 151 ILE n 1 152 THR n 1 153 ALA n 1 154 ASP n 1 155 LYS n 1 156 GLN n 1 157 LYS n 1 158 ASN n 1 159 GLY n 1 160 ILE n 1 161 LYS n 1 162 ALA n 1 163 ASN n 1 164 PHE n 1 165 LYS n 1 166 ILE n 1 167 ARG n 1 168 HIS n 1 169 ASN n 1 170 ILE n 1 171 GLU n 1 172 ASP n 1 173 GLY n 1 174 SER n 1 175 VAL n 1 176 GLN n 1 177 LEU n 1 178 ALA n 1 179 ASP n 1 180 HIS n 1 181 TYR n 1 182 GLN n 1 183 GLN n 1 184 ASN n 1 185 THR n 1 186 PRO n 1 187 ILE n 1 188 GLY n 1 189 ASP n 1 190 GLY n 1 191 PRO n 1 192 VAL n 1 193 LEU n 1 194 LEU n 1 195 PRO n 1 196 ASP n 1 197 ASN n 1 198 HIS n 1 199 TYR n 1 200 LEU n 1 201 ASP n 1 202 THR n 1 203 GLU n 1 204 SER n 1 205 ALA n 1 206 LEU n 1 207 SER n 1 208 LYS n 1 209 ASP n 1 210 PRO n 1 211 ASN n 1 212 GLU n 1 213 LYS n 1 214 ARG n 1 215 ASP n 1 216 HIS n 1 217 MET n 1 218 VAL n 1 219 LEU n 1 220 LEU n 1 221 GLU n 1 222 GLU n 1 223 VAL n 1 224 GLU n 1 225 ALA n 1 226 ALA n 1 227 GLY n 1 228 ILE n 1 229 THR n 1 230 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name Jellyfish _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene GFP _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Aequorea victoria' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 6100 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code GFP_AEQVI _struct_ref.pdbx_db_accession P42212 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLKFICTTGKLPVPWPTLVTTFSYGVQCFSRYPDHMKQH DFFKSAMPEGYVQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIMADKQKNGI KVNFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLLEFVTAAGIT ; _struct_ref.pdbx_align_begin 2 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4L12 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 229 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P42212 _struct_ref_seq.db_align_beg 2 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 230 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 230 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4L12 MET A 1 ? UNP P42212 ? ? 'expression tag' 0 1 1 4L12 VAL A 2 ? UNP P42212 ? ? 'expression tag' 1 2 1 4L12 LEU A 65 ? UNP P42212 PHE 64 'engineered mutation' 64 3 1 4L12 CRO A 66 ? UNP P42212 SER 65 chromophore 66 4 1 4L12 CRO A 66 ? UNP P42212 TYR 66 chromophore 66 5 1 4L12 CRO A 66 ? UNP P42212 GLY 67 chromophore 66 6 1 4L12 GLU A 146 ? UNP P42212 SER 147 'engineered mutation' 147 7 1 4L12 THR A 152 ? UNP P42212 MET 153 'engineered mutation' 153 8 1 4L12 ALA A 162 ? UNP P42212 VAL 163 'engineered mutation' 163 9 1 4L12 ASP A 201 ? UNP P42212 SER 202 'engineered mutation' 202 10 1 4L12 GLU A 203 ? UNP P42212 GLN 204 'engineered mutation' 204 11 1 4L12 GLU A 222 ? UNP P42212 PHE 223 'engineered mutation' 223 12 1 4L12 GLU A 224 ? UNP P42212 THR 225 'engineered mutation' 225 13 1 4L12 LEU A 230 ? UNP P42212 ? ? 'expression tag' 231 14 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CRO 'L-peptide linking' n '{2-[(1R,2R)-1-amino-2-hydroxypropyl]-4-(4-hydroxybenzylidene)-5-oxo-4,5-dihydro-1H-imidazol-1-yl}acetic acid' 'PEPTIDE DERIVED CHROMOPHORE' 'C15 H17 N3 O5' 319.313 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GD non-polymer . 'GADOLINIUM ATOM' ? Gd 157.250 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4L12 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.05 _exptl_crystal.density_percent_sol 59.64 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details ;51 mM HEPES, pH 7.0, 1 mM beta-mercaptoethanol, 50 mM sodium acetate, 17% PEG4000, 2 mM gadolinium chloride, VAPOR DIFFUSION, HANGING DROP, temperature 298K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date 2011-02-23 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'double crystal Si(220)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 22-BM' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 22-BM _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0 # _reflns.entry_id 4L12 _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 50 _reflns.d_resolution_high 1.78 _reflns.number_obs 30260 _reflns.number_all 30260 _reflns.percent_possible_obs 98.3 _reflns.pdbx_Rmerge_I_obs 0.085 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 14.2 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 7.2 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.78 _reflns_shell.d_res_low 1.84 _reflns_shell.percent_possible_all 93.8 _reflns_shell.Rmerge_I_obs 0.185 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 8.7 _reflns_shell.pdbx_redundancy 6.3 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4L12 _refine.ls_number_reflns_obs 28732 _refine.ls_number_reflns_all 30260 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 27.13 _refine.ls_d_res_high 1.78 _refine.ls_percent_reflns_obs 98.19 _refine.ls_R_factor_obs 0.19720 _refine.ls_R_factor_all 0.1972 _refine.ls_R_factor_R_work 0.19604 _refine.ls_R_factor_R_free 0.21965 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 1526 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.950 _refine.correlation_coeff_Fo_to_Fc_free 0.942 _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 2OKW' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.114 _refine.pdbx_overall_ESU_R_Free 0.107 _refine.overall_SU_ML 0.070 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 2.199 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1842 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 2 _refine_hist.number_atoms_solvent 138 _refine_hist.number_atoms_total 1982 _refine_hist.d_res_high 1.78 _refine_hist.d_res_low 27.13 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.014 0.022 ? 1973 ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.594 1.976 ? 2682 ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 6.946 5.000 ? 249 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 31.643 25.842 ? 101 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 13.274 15.000 ? 354 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 8.549 15.000 ? 6 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.101 0.200 ? 290 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.007 0.020 ? 1519 ? 'X-RAY DIFFRACTION' r_nbd_refined 0.249 0.200 ? 832 ? 'X-RAY DIFFRACTION' r_nbtor_refined 0.304 0.200 ? 1288 ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_refined 0.128 0.200 ? 141 ? 'X-RAY DIFFRACTION' r_metal_ion_refined 0.172 0.200 ? 3 ? 'X-RAY DIFFRACTION' r_symmetry_vdw_refined 0.205 0.200 ? 37 ? 'X-RAY DIFFRACTION' r_symmetry_hbond_refined 0.139 0.200 ? 14 ? 'X-RAY DIFFRACTION' r_mcbond_it 0.959 1.500 ? 1217 ? 'X-RAY DIFFRACTION' r_mcangle_it 1.537 2.000 ? 1924 ? 'X-RAY DIFFRACTION' r_scbond_it 2.370 3.000 ? 893 ? 'X-RAY DIFFRACTION' r_scangle_it 3.705 4.500 ? 750 ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.78 _refine_ls_shell.d_res_low 1.829 _refine_ls_shell.number_reflns_R_work 1917 _refine_ls_shell.R_factor_R_work 0.253 _refine_ls_shell.percent_reflns_obs 90.54 _refine_ls_shell.R_factor_R_free 0.253 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 92 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4L12 _struct.title 'Crystal structure of EGFP-based Calcium Sensor CatchER complexed with Gd' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4L12 _struct_keywords.pdbx_keywords 'CALCIUM BINDING PROTEIN' _struct_keywords.text 'chromophore, luminescence, fluorescent protein, calcium sensor, metal ions, gadolinium, CALCIUM BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LYS A 4 ? THR A 10 ? LYS A 3 THR A 9 5 ? 7 HELX_P HELX_P2 2 ALA A 38 ? TYR A 40 ? ALA A 37 TYR A 39 5 ? 3 HELX_P HELX_P3 3 PRO A 57 ? VAL A 62 ? PRO A 56 VAL A 61 5 ? 6 HELX_P HELX_P4 4 VAL A 67 ? SER A 71 ? VAL A 68 SER A 72 5 ? 5 HELX_P HELX_P5 5 PRO A 74 ? HIS A 80 ? PRO A 75 HIS A 81 5 ? 7 HELX_P HELX_P6 6 ASP A 81 ? ALA A 86 ? ASP A 82 ALA A 87 1 ? 6 HELX_P HELX_P7 7 LYS A 155 ? ASN A 158 ? LYS A 156 ASN A 159 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A LEU 65 C ? ? ? 1_555 A CRO 66 N1 ? ? A LEU 64 A CRO 66 1_555 ? ? ? ? ? ? ? 1.505 ? ? covale2 covale both ? A CRO 66 C3 ? ? ? 1_555 A VAL 67 N ? ? A CRO 66 A VAL 68 1_555 ? ? ? ? ? ? ? 1.418 ? ? metalc1 metalc ? ? A GLU 146 OE2 ? ? ? 1_555 B GD . GD ? ? A GLU 147 A GD 501 1_555 ? ? ? ? ? ? ? 2.203 ? ? metalc2 metalc ? ? A GLU 146 OE1 ? ? ? 1_555 B GD . GD ? ? A GLU 147 A GD 501 1_555 ? ? ? ? ? ? ? 3.388 ? ? metalc3 metalc ? ? A ASP 201 OD2 ? ? ? 1_555 B GD . GD ? ? A ASP 202 A GD 501 1_555 ? ? ? ? ? ? ? 2.543 ? ? metalc4 metalc ? ? A ASP 201 OD1 ? ? ? 1_555 B GD . GD ? ? A ASP 202 A GD 501 1_555 ? ? ? ? ? ? ? 2.557 ? ? metalc5 metalc ? ? A GLU 203 OE1 ? ? ? 1_555 B GD . GD ? ? A GLU 204 A GD 501 1_555 ? ? ? ? ? ? ? 2.655 ? ? metalc6 metalc ? ? A GLU 203 OE2 ? ? ? 1_555 C GD . GD ? ? A GLU 204 A GD 502 1_555 ? ? ? ? ? ? ? 2.925 ? ? metalc7 metalc ? ? A GLU 203 OE1 ? ? ? 1_555 C GD . GD ? ? A GLU 204 A GD 502 1_555 ? ? ? ? ? ? ? 3.199 ? ? metalc8 metalc ? ? B GD . GD ? ? ? 1_555 D HOH . O ? ? A GD 501 A HOH 726 1_555 ? ? ? ? ? ? ? 2.136 ? ? metalc9 metalc ? ? C GD . GD ? ? ? 1_555 D HOH . O ? ? A GD 502 A HOH 674 1_555 ? ? ? ? ? ? ? 2.887 ? ? metalc10 metalc ? ? C GD . GD ? ? ? 1_555 D HOH . O ? ? A GD 502 A HOH 727 1_555 ? ? ? ? ? ? ? 2.239 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id MET _struct_mon_prot_cis.label_seq_id 87 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id MET _struct_mon_prot_cis.auth_seq_id 88 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 88 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 89 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 3.46 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 12 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel A 8 9 ? anti-parallel A 9 10 ? anti-parallel A 10 11 ? anti-parallel A 11 12 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 13 ? VAL A 23 ? VAL A 12 VAL A 22 A 2 HIS A 26 ? ASP A 37 ? HIS A 25 ASP A 36 A 3 LYS A 42 ? CYS A 49 ? LYS A 41 CYS A 48 A 4 HIS A 216 ? ALA A 226 ? HIS A 217 ALA A 227 A 5 HIS A 198 ? SER A 207 ? HIS A 199 SER A 208 A 6 HIS A 147 ? ASP A 154 ? HIS A 148 ASP A 155 A 7 GLY A 159 ? ASN A 169 ? GLY A 160 ASN A 170 A 8 VAL A 175 ? PRO A 186 ? VAL A 176 PRO A 187 A 9 TYR A 91 ? PHE A 99 ? TYR A 92 PHE A 100 A 10 ASN A 104 ? GLU A 114 ? ASN A 105 GLU A 115 A 11 THR A 117 ? ILE A 127 ? THR A 118 ILE A 128 A 12 VAL A 13 ? VAL A 23 ? VAL A 12 VAL A 22 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLY A 21 ? N GLY A 20 O PHE A 28 ? O PHE A 27 A 2 3 N ASP A 37 ? N ASP A 36 O LYS A 42 ? O LYS A 41 A 3 4 N LEU A 45 ? N LEU A 44 O LEU A 219 ? O LEU A 220 A 4 5 O GLU A 224 ? O GLU A 225 N ASP A 201 ? N ASP A 202 A 5 6 O HIS A 198 ? O HIS A 199 N ILE A 151 ? N ILE A 152 A 6 7 N ASP A 154 ? N ASP A 155 O GLY A 159 ? O GLY A 160 A 7 8 N HIS A 168 ? N HIS A 169 O GLN A 176 ? O GLN A 177 A 8 9 O GLN A 183 ? O GLN A 184 N GLU A 94 ? N GLU A 95 A 9 10 N ILE A 97 ? N ILE A 98 O TYR A 105 ? O TYR A 106 A 10 11 N LYS A 112 ? N LYS A 113 O VAL A 119 ? O VAL A 120 A 11 12 O ILE A 122 ? O ILE A 123 N GLU A 18 ? N GLU A 17 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A GD 501 ? 5 'BINDING SITE FOR RESIDUE GD A 501' AC2 Software A GD 502 ? 4 'BINDING SITE FOR RESIDUE GD A 502' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 GLU A 146 ? GLU A 147 . ? 1_555 ? 2 AC1 5 ASP A 201 ? ASP A 202 . ? 1_555 ? 3 AC1 5 GLU A 203 ? GLU A 204 . ? 1_555 ? 4 AC1 5 GD C . ? GD A 502 . ? 1_555 ? 5 AC1 5 HOH D . ? HOH A 726 . ? 1_555 ? 6 AC2 4 GLU A 203 ? GLU A 204 . ? 1_555 ? 7 AC2 4 GD B . ? GD A 501 . ? 1_555 ? 8 AC2 4 HOH D . ? HOH A 674 . ? 1_555 ? 9 AC2 4 HOH D . ? HOH A 727 . ? 1_555 ? # _database_PDB_matrix.entry_id 4L12 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4L12 _atom_sites.fract_transf_matrix[1][1] 0.016377 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011321 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008463 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C GD N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 0 0 MET MET A . n A 1 2 VAL 2 1 1 VAL VAL A . n A 1 3 SER 3 2 2 SER SER A . n A 1 4 LYS 4 3 3 LYS LYS A . n A 1 5 GLY 5 4 4 GLY GLY A . n A 1 6 GLU 6 5 5 GLU GLU A . n A 1 7 GLU 7 6 6 GLU GLU A . n A 1 8 LEU 8 7 7 LEU LEU A . n A 1 9 PHE 9 8 8 PHE PHE A . n A 1 10 THR 10 9 9 THR THR A . n A 1 11 GLY 11 10 10 GLY GLY A . n A 1 12 VAL 12 11 11 VAL VAL A . n A 1 13 VAL 13 12 12 VAL VAL A . n A 1 14 PRO 14 13 13 PRO PRO A . n A 1 15 ILE 15 14 14 ILE ILE A . n A 1 16 LEU 16 15 15 LEU LEU A . n A 1 17 VAL 17 16 16 VAL VAL A . n A 1 18 GLU 18 17 17 GLU GLU A . n A 1 19 LEU 19 18 18 LEU LEU A . n A 1 20 ASP 20 19 19 ASP ASP A . n A 1 21 GLY 21 20 20 GLY GLY A . n A 1 22 ASP 22 21 21 ASP ASP A . n A 1 23 VAL 23 22 22 VAL VAL A . n A 1 24 ASN 24 23 23 ASN ASN A . n A 1 25 GLY 25 24 24 GLY GLY A . n A 1 26 HIS 26 25 25 HIS HIS A . n A 1 27 LYS 27 26 26 LYS LYS A . n A 1 28 PHE 28 27 27 PHE PHE A . n A 1 29 SER 29 28 28 SER SER A . n A 1 30 VAL 30 29 29 VAL VAL A . n A 1 31 SER 31 30 30 SER SER A . n A 1 32 GLY 32 31 31 GLY GLY A . n A 1 33 GLU 33 32 32 GLU GLU A . n A 1 34 GLY 34 33 33 GLY GLY A . n A 1 35 GLU 35 34 34 GLU GLU A . n A 1 36 GLY 36 35 35 GLY GLY A . n A 1 37 ASP 37 36 36 ASP ASP A . n A 1 38 ALA 38 37 37 ALA ALA A . n A 1 39 THR 39 38 38 THR THR A . n A 1 40 TYR 40 39 39 TYR TYR A . n A 1 41 GLY 41 40 40 GLY GLY A . n A 1 42 LYS 42 41 41 LYS LYS A . n A 1 43 LEU 43 42 42 LEU LEU A . n A 1 44 THR 44 43 43 THR THR A . n A 1 45 LEU 45 44 44 LEU LEU A . n A 1 46 LYS 46 45 45 LYS LYS A . n A 1 47 PHE 47 46 46 PHE PHE A . n A 1 48 ILE 48 47 47 ILE ILE A . n A 1 49 CYS 49 48 48 CYS CYS A . n A 1 50 THR 50 49 49 THR THR A . n A 1 51 THR 51 50 50 THR THR A . n A 1 52 GLY 52 51 51 GLY GLY A . n A 1 53 LYS 53 52 52 LYS LYS A . n A 1 54 LEU 54 53 53 LEU LEU A . n A 1 55 PRO 55 54 54 PRO PRO A . n A 1 56 VAL 56 55 55 VAL VAL A . n A 1 57 PRO 57 56 56 PRO PRO A . n A 1 58 TRP 58 57 57 TRP TRP A . n A 1 59 PRO 59 58 58 PRO PRO A . n A 1 60 THR 60 59 59 THR THR A . n A 1 61 LEU 61 60 60 LEU LEU A . n A 1 62 VAL 62 61 61 VAL VAL A . n A 1 63 THR 63 62 62 THR THR A . n A 1 64 THR 64 63 63 THR THR A . n A 1 65 LEU 65 64 64 LEU LEU A . n A 1 66 CRO 66 66 66 CRO CRO A . n A 1 67 VAL 67 68 68 VAL VAL A . n A 1 68 GLN 68 69 69 GLN GLN A . n A 1 69 CYS 69 70 70 CYS CYS A . n A 1 70 PHE 70 71 71 PHE PHE A . n A 1 71 SER 71 72 72 SER SER A . n A 1 72 ARG 72 73 73 ARG ARG A . n A 1 73 TYR 73 74 74 TYR TYR A . n A 1 74 PRO 74 75 75 PRO PRO A . n A 1 75 ASP 75 76 76 ASP ASP A . n A 1 76 HIS 76 77 77 HIS HIS A . n A 1 77 MET 77 78 78 MET MET A . n A 1 78 LYS 78 79 79 LYS LYS A . n A 1 79 GLN 79 80 80 GLN GLN A . n A 1 80 HIS 80 81 81 HIS HIS A . n A 1 81 ASP 81 82 82 ASP ASP A . n A 1 82 PHE 82 83 83 PHE PHE A . n A 1 83 PHE 83 84 84 PHE PHE A . n A 1 84 LYS 84 85 85 LYS LYS A . n A 1 85 SER 85 86 86 SER SER A . n A 1 86 ALA 86 87 87 ALA ALA A . n A 1 87 MET 87 88 88 MET MET A . n A 1 88 PRO 88 89 89 PRO PRO A . n A 1 89 GLU 89 90 90 GLU GLU A . n A 1 90 GLY 90 91 91 GLY GLY A . n A 1 91 TYR 91 92 92 TYR TYR A . n A 1 92 VAL 92 93 93 VAL VAL A . n A 1 93 GLN 93 94 94 GLN GLN A . n A 1 94 GLU 94 95 95 GLU GLU A . n A 1 95 ARG 95 96 96 ARG ARG A . n A 1 96 THR 96 97 97 THR THR A . n A 1 97 ILE 97 98 98 ILE ILE A . n A 1 98 PHE 98 99 99 PHE PHE A . n A 1 99 PHE 99 100 100 PHE PHE A . n A 1 100 LYS 100 101 101 LYS LYS A . n A 1 101 ASP 101 102 102 ASP ASP A . n A 1 102 ASP 102 103 103 ASP ASP A . n A 1 103 GLY 103 104 104 GLY GLY A . n A 1 104 ASN 104 105 105 ASN ASN A . n A 1 105 TYR 105 106 106 TYR TYR A . n A 1 106 LYS 106 107 107 LYS LYS A . n A 1 107 THR 107 108 108 THR THR A . n A 1 108 ARG 108 109 109 ARG ARG A . n A 1 109 ALA 109 110 110 ALA ALA A . n A 1 110 GLU 110 111 111 GLU GLU A . n A 1 111 VAL 111 112 112 VAL VAL A . n A 1 112 LYS 112 113 113 LYS LYS A . n A 1 113 PHE 113 114 114 PHE PHE A . n A 1 114 GLU 114 115 115 GLU GLU A . n A 1 115 GLY 115 116 116 GLY GLY A . n A 1 116 ASP 116 117 117 ASP ASP A . n A 1 117 THR 117 118 118 THR THR A . n A 1 118 LEU 118 119 119 LEU LEU A . n A 1 119 VAL 119 120 120 VAL VAL A . n A 1 120 ASN 120 121 121 ASN ASN A . n A 1 121 ARG 121 122 122 ARG ARG A . n A 1 122 ILE 122 123 123 ILE ILE A . n A 1 123 GLU 123 124 124 GLU GLU A . n A 1 124 LEU 124 125 125 LEU LEU A . n A 1 125 LYS 125 126 126 LYS LYS A . n A 1 126 GLY 126 127 127 GLY GLY A . n A 1 127 ILE 127 128 128 ILE ILE A . n A 1 128 ASP 128 129 129 ASP ASP A . n A 1 129 PHE 129 130 130 PHE PHE A . n A 1 130 LYS 130 131 131 LYS LYS A . n A 1 131 GLU 131 132 132 GLU GLU A . n A 1 132 ASP 132 133 133 ASP ASP A . n A 1 133 GLY 133 134 134 GLY GLY A . n A 1 134 ASN 134 135 135 ASN ASN A . n A 1 135 ILE 135 136 136 ILE ILE A . n A 1 136 LEU 136 137 137 LEU LEU A . n A 1 137 GLY 137 138 138 GLY GLY A . n A 1 138 HIS 138 139 139 HIS HIS A . n A 1 139 LYS 139 140 140 LYS LYS A . n A 1 140 LEU 140 141 141 LEU LEU A . n A 1 141 GLU 141 142 142 GLU GLU A . n A 1 142 TYR 142 143 143 TYR TYR A . n A 1 143 ASN 143 144 144 ASN ASN A . n A 1 144 TYR 144 145 145 TYR TYR A . n A 1 145 ASN 145 146 146 ASN ASN A . n A 1 146 GLU 146 147 147 GLU GLU A . n A 1 147 HIS 147 148 148 HIS HIS A . n A 1 148 ASN 148 149 149 ASN ASN A . n A 1 149 VAL 149 150 150 VAL VAL A . n A 1 150 TYR 150 151 151 TYR TYR A . n A 1 151 ILE 151 152 152 ILE ILE A . n A 1 152 THR 152 153 153 THR THR A . n A 1 153 ALA 153 154 154 ALA ALA A . n A 1 154 ASP 154 155 155 ASP ASP A . n A 1 155 LYS 155 156 156 LYS LYS A . n A 1 156 GLN 156 157 157 GLN GLN A . n A 1 157 LYS 157 158 158 LYS LYS A . n A 1 158 ASN 158 159 159 ASN ASN A . n A 1 159 GLY 159 160 160 GLY GLY A . n A 1 160 ILE 160 161 161 ILE ILE A . n A 1 161 LYS 161 162 162 LYS LYS A . n A 1 162 ALA 162 163 163 ALA ALA A . n A 1 163 ASN 163 164 164 ASN ASN A . n A 1 164 PHE 164 165 165 PHE PHE A . n A 1 165 LYS 165 166 166 LYS LYS A . n A 1 166 ILE 166 167 167 ILE ILE A . n A 1 167 ARG 167 168 168 ARG ARG A . n A 1 168 HIS 168 169 169 HIS HIS A . n A 1 169 ASN 169 170 170 ASN ASN A . n A 1 170 ILE 170 171 171 ILE ILE A . n A 1 171 GLU 171 172 172 GLU GLU A . n A 1 172 ASP 172 173 173 ASP ASP A . n A 1 173 GLY 173 174 174 GLY GLY A . n A 1 174 SER 174 175 175 SER SER A . n A 1 175 VAL 175 176 176 VAL VAL A . n A 1 176 GLN 176 177 177 GLN GLN A . n A 1 177 LEU 177 178 178 LEU LEU A . n A 1 178 ALA 178 179 179 ALA ALA A . n A 1 179 ASP 179 180 180 ASP ASP A . n A 1 180 HIS 180 181 181 HIS HIS A . n A 1 181 TYR 181 182 182 TYR TYR A . n A 1 182 GLN 182 183 183 GLN GLN A . n A 1 183 GLN 183 184 184 GLN GLN A . n A 1 184 ASN 184 185 185 ASN ASN A . n A 1 185 THR 185 186 186 THR THR A . n A 1 186 PRO 186 187 187 PRO PRO A . n A 1 187 ILE 187 188 188 ILE ILE A . n A 1 188 GLY 188 189 189 GLY GLY A . n A 1 189 ASP 189 190 190 ASP ASP A . n A 1 190 GLY 190 191 191 GLY GLY A . n A 1 191 PRO 191 192 192 PRO PRO A . n A 1 192 VAL 192 193 193 VAL VAL A . n A 1 193 LEU 193 194 194 LEU LEU A . n A 1 194 LEU 194 195 195 LEU LEU A . n A 1 195 PRO 195 196 196 PRO PRO A . n A 1 196 ASP 196 197 197 ASP ASP A . n A 1 197 ASN 197 198 198 ASN ASN A . n A 1 198 HIS 198 199 199 HIS HIS A . n A 1 199 TYR 199 200 200 TYR TYR A . n A 1 200 LEU 200 201 201 LEU LEU A . n A 1 201 ASP 201 202 202 ASP ASP A . n A 1 202 THR 202 203 203 THR THR A . n A 1 203 GLU 203 204 204 GLU GLU A . n A 1 204 SER 204 205 205 SER SER A . n A 1 205 ALA 205 206 206 ALA ALA A . n A 1 206 LEU 206 207 207 LEU LEU A . n A 1 207 SER 207 208 208 SER SER A . n A 1 208 LYS 208 209 209 LYS LYS A . n A 1 209 ASP 209 210 210 ASP ASP A . n A 1 210 PRO 210 211 211 PRO PRO A . n A 1 211 ASN 211 212 212 ASN ASN A . n A 1 212 GLU 212 213 213 GLU GLU A . n A 1 213 LYS 213 214 214 LYS LYS A . n A 1 214 ARG 214 215 215 ARG ARG A . n A 1 215 ASP 215 216 216 ASP ASP A . n A 1 216 HIS 216 217 217 HIS HIS A . n A 1 217 MET 217 218 218 MET MET A . n A 1 218 VAL 218 219 219 VAL VAL A . n A 1 219 LEU 219 220 220 LEU LEU A . n A 1 220 LEU 220 221 221 LEU LEU A . n A 1 221 GLU 221 222 222 GLU GLU A . n A 1 222 GLU 222 223 223 GLU GLU A . n A 1 223 VAL 223 224 224 VAL VAL A . n A 1 224 GLU 224 225 225 GLU GLU A . n A 1 225 ALA 225 226 226 ALA ALA A . n A 1 226 ALA 226 227 227 ALA ALA A . n A 1 227 GLY 227 228 228 GLY GLY A . n A 1 228 ILE 228 229 229 ILE ILE A . n A 1 229 THR 229 230 230 THR THR A . n A 1 230 LEU 230 231 231 LEU LEU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GD 1 501 501 GD GD A . C 2 GD 1 502 502 GD GD A . D 3 HOH 1 601 1 HOH HOH A . D 3 HOH 2 602 2 HOH HOH A . D 3 HOH 3 603 3 HOH HOH A . D 3 HOH 4 604 4 HOH HOH A . D 3 HOH 5 605 5 HOH HOH A . D 3 HOH 6 606 6 HOH HOH A . D 3 HOH 7 607 7 HOH HOH A . D 3 HOH 8 608 8 HOH HOH A . D 3 HOH 9 609 9 HOH HOH A . D 3 HOH 10 610 10 HOH HOH A . D 3 HOH 11 611 11 HOH HOH A . D 3 HOH 12 612 12 HOH HOH A . D 3 HOH 13 613 13 HOH HOH A . D 3 HOH 14 614 14 HOH HOH A . D 3 HOH 15 615 15 HOH HOH A . D 3 HOH 16 616 16 HOH HOH A . D 3 HOH 17 617 17 HOH HOH A . D 3 HOH 18 618 18 HOH HOH A . D 3 HOH 19 619 19 HOH HOH A . D 3 HOH 20 620 20 HOH HOH A . D 3 HOH 21 621 21 HOH HOH A . D 3 HOH 22 622 22 HOH HOH A . D 3 HOH 23 623 23 HOH HOH A . D 3 HOH 24 624 24 HOH HOH A . D 3 HOH 25 625 25 HOH HOH A . D 3 HOH 26 626 26 HOH HOH A . D 3 HOH 27 627 27 HOH HOH A . D 3 HOH 28 628 28 HOH HOH A . D 3 HOH 29 629 29 HOH HOH A . D 3 HOH 30 630 30 HOH HOH A . D 3 HOH 31 631 31 HOH HOH A . D 3 HOH 32 632 32 HOH HOH A . D 3 HOH 33 633 33 HOH HOH A . D 3 HOH 34 634 34 HOH HOH A . D 3 HOH 35 635 35 HOH HOH A . D 3 HOH 36 636 36 HOH HOH A . D 3 HOH 37 637 37 HOH HOH A . D 3 HOH 38 638 38 HOH HOH A . D 3 HOH 39 639 39 HOH HOH A . D 3 HOH 40 640 40 HOH HOH A . D 3 HOH 41 641 41 HOH HOH A . D 3 HOH 42 642 42 HOH HOH A . D 3 HOH 43 643 43 HOH HOH A . D 3 HOH 44 644 44 HOH HOH A . D 3 HOH 45 645 45 HOH HOH A . D 3 HOH 46 646 46 HOH HOH A . D 3 HOH 47 647 47 HOH HOH A . D 3 HOH 48 648 48 HOH HOH A . D 3 HOH 49 649 49 HOH HOH A . D 3 HOH 50 650 50 HOH HOH A . D 3 HOH 51 651 51 HOH HOH A . D 3 HOH 52 652 52 HOH HOH A . D 3 HOH 53 653 53 HOH HOH A . D 3 HOH 54 654 54 HOH HOH A . D 3 HOH 55 655 55 HOH HOH A . D 3 HOH 56 656 56 HOH HOH A . D 3 HOH 57 657 57 HOH HOH A . D 3 HOH 58 658 58 HOH HOH A . D 3 HOH 59 659 59 HOH HOH A . D 3 HOH 60 660 60 HOH HOH A . D 3 HOH 61 661 61 HOH HOH A . D 3 HOH 62 662 62 HOH HOH A . D 3 HOH 63 663 63 HOH HOH A . D 3 HOH 64 664 64 HOH HOH A . D 3 HOH 65 665 65 HOH HOH A . D 3 HOH 66 666 66 HOH HOH A . D 3 HOH 67 667 67 HOH HOH A . D 3 HOH 68 668 68 HOH HOH A . D 3 HOH 69 669 69 HOH HOH A . D 3 HOH 70 670 70 HOH HOH A . D 3 HOH 71 671 71 HOH HOH A . D 3 HOH 72 672 72 HOH HOH A . D 3 HOH 73 673 73 HOH HOH A . D 3 HOH 74 674 74 HOH HOH A . D 3 HOH 75 675 75 HOH HOH A . D 3 HOH 76 676 76 HOH HOH A . D 3 HOH 77 677 77 HOH HOH A . D 3 HOH 78 678 78 HOH HOH A . D 3 HOH 79 679 79 HOH HOH A . D 3 HOH 80 680 80 HOH HOH A . D 3 HOH 81 681 81 HOH HOH A . D 3 HOH 82 682 82 HOH HOH A . D 3 HOH 83 683 83 HOH HOH A . D 3 HOH 84 684 84 HOH HOH A . D 3 HOH 85 685 85 HOH HOH A . D 3 HOH 86 686 86 HOH HOH A . D 3 HOH 87 687 87 HOH HOH A . D 3 HOH 88 688 88 HOH HOH A . D 3 HOH 89 689 89 HOH HOH A . D 3 HOH 90 690 90 HOH HOH A . D 3 HOH 91 691 91 HOH HOH A . D 3 HOH 92 692 92 HOH HOH A . D 3 HOH 93 693 93 HOH HOH A . D 3 HOH 94 694 94 HOH HOH A . D 3 HOH 95 695 95 HOH HOH A . D 3 HOH 96 696 96 HOH HOH A . D 3 HOH 97 697 97 HOH HOH A . D 3 HOH 98 698 98 HOH HOH A . D 3 HOH 99 699 99 HOH HOH A . D 3 HOH 100 700 100 HOH HOH A . D 3 HOH 101 701 101 HOH HOH A . D 3 HOH 102 702 102 HOH HOH A . D 3 HOH 103 703 103 HOH HOH A . D 3 HOH 104 704 104 HOH HOH A . D 3 HOH 105 705 105 HOH HOH A . D 3 HOH 106 706 106 HOH HOH A . D 3 HOH 107 707 107 HOH HOH A . D 3 HOH 108 708 108 HOH HOH A . D 3 HOH 109 709 109 HOH HOH A . D 3 HOH 110 710 110 HOH HOH A . D 3 HOH 111 711 111 HOH HOH A . D 3 HOH 112 712 112 HOH HOH A . D 3 HOH 113 713 113 HOH HOH A . D 3 HOH 114 714 114 HOH HOH A . D 3 HOH 115 715 115 HOH HOH A . D 3 HOH 116 716 116 HOH HOH A . D 3 HOH 117 717 117 HOH HOH A . D 3 HOH 118 718 118 HOH HOH A . D 3 HOH 119 719 119 HOH HOH A . D 3 HOH 120 720 120 HOH HOH A . D 3 HOH 121 721 121 HOH HOH A . D 3 HOH 122 722 122 HOH HOH A . D 3 HOH 123 723 123 HOH HOH A . D 3 HOH 124 724 124 HOH HOH A . D 3 HOH 125 725 125 HOH HOH A . D 3 HOH 126 726 126 HOH HOH A . D 3 HOH 127 727 127 HOH HOH A . D 3 HOH 128 728 128 HOH HOH A . D 3 HOH 129 729 129 HOH HOH A . D 3 HOH 130 730 130 HOH HOH A . D 3 HOH 131 731 131 HOH HOH A . D 3 HOH 132 732 132 HOH HOH A . D 3 HOH 133 733 133 HOH HOH A . D 3 HOH 134 734 134 HOH HOH A . D 3 HOH 135 735 135 HOH HOH A . D 3 HOH 136 736 136 HOH HOH A . D 3 HOH 137 737 137 HOH HOH A . D 3 HOH 138 738 138 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A CRO 66 A CRO 66 ? THR 'CIRCULARIZED TRI-PEPTIDE CHROMOPHORE' 2 A CRO 66 A CRO 66 ? TYR 'CIRCULARIZED TRI-PEPTIDE CHROMOPHORE' 3 A CRO 66 A CRO 66 ? GLY 'CIRCULARIZED TRI-PEPTIDE CHROMOPHORE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 636 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id D _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OE2 ? A GLU 146 ? A GLU 147 ? 1_555 GD ? B GD . ? A GD 501 ? 1_555 OE1 ? A GLU 146 ? A GLU 147 ? 1_555 40.0 ? 2 OE2 ? A GLU 146 ? A GLU 147 ? 1_555 GD ? B GD . ? A GD 501 ? 1_555 OD2 ? A ASP 201 ? A ASP 202 ? 1_555 94.0 ? 3 OE1 ? A GLU 146 ? A GLU 147 ? 1_555 GD ? B GD . ? A GD 501 ? 1_555 OD2 ? A ASP 201 ? A ASP 202 ? 1_555 132.3 ? 4 OE2 ? A GLU 146 ? A GLU 147 ? 1_555 GD ? B GD . ? A GD 501 ? 1_555 OD1 ? A ASP 201 ? A ASP 202 ? 1_555 73.0 ? 5 OE1 ? A GLU 146 ? A GLU 147 ? 1_555 GD ? B GD . ? A GD 501 ? 1_555 OD1 ? A ASP 201 ? A ASP 202 ? 1_555 94.0 ? 6 OD2 ? A ASP 201 ? A ASP 202 ? 1_555 GD ? B GD . ? A GD 501 ? 1_555 OD1 ? A ASP 201 ? A ASP 202 ? 1_555 50.7 ? 7 OE2 ? A GLU 146 ? A GLU 147 ? 1_555 GD ? B GD . ? A GD 501 ? 1_555 OE1 ? A GLU 203 ? A GLU 204 ? 1_555 95.1 ? 8 OE1 ? A GLU 146 ? A GLU 147 ? 1_555 GD ? B GD . ? A GD 501 ? 1_555 OE1 ? A GLU 203 ? A GLU 204 ? 1_555 56.4 ? 9 OD2 ? A ASP 201 ? A ASP 202 ? 1_555 GD ? B GD . ? A GD 501 ? 1_555 OE1 ? A GLU 203 ? A GLU 204 ? 1_555 150.3 ? 10 OD1 ? A ASP 201 ? A ASP 202 ? 1_555 GD ? B GD . ? A GD 501 ? 1_555 OE1 ? A GLU 203 ? A GLU 204 ? 1_555 105.8 ? 11 OE2 ? A GLU 146 ? A GLU 147 ? 1_555 GD ? B GD . ? A GD 501 ? 1_555 O ? D HOH . ? A HOH 726 ? 1_555 72.6 ? 12 OE1 ? A GLU 146 ? A GLU 147 ? 1_555 GD ? B GD . ? A GD 501 ? 1_555 O ? D HOH . ? A HOH 726 ? 1_555 49.3 ? 13 OD2 ? A ASP 201 ? A ASP 202 ? 1_555 GD ? B GD . ? A GD 501 ? 1_555 O ? D HOH . ? A HOH 726 ? 1_555 146.1 ? 14 OD1 ? A ASP 201 ? A ASP 202 ? 1_555 GD ? B GD . ? A GD 501 ? 1_555 O ? D HOH . ? A HOH 726 ? 1_555 142.6 ? 15 OE1 ? A GLU 203 ? A GLU 204 ? 1_555 GD ? B GD . ? A GD 501 ? 1_555 O ? D HOH . ? A HOH 726 ? 1_555 63.4 ? 16 OE2 ? A GLU 203 ? A GLU 204 ? 1_555 GD ? C GD . ? A GD 502 ? 1_555 OE1 ? A GLU 203 ? A GLU 204 ? 1_555 41.6 ? 17 OE2 ? A GLU 203 ? A GLU 204 ? 1_555 GD ? C GD . ? A GD 502 ? 1_555 O ? D HOH . ? A HOH 674 ? 1_555 46.3 ? 18 OE1 ? A GLU 203 ? A GLU 204 ? 1_555 GD ? C GD . ? A GD 502 ? 1_555 O ? D HOH . ? A HOH 674 ? 1_555 60.8 ? 19 OE2 ? A GLU 203 ? A GLU 204 ? 1_555 GD ? C GD . ? A GD 502 ? 1_555 O ? D HOH . ? A HOH 727 ? 1_555 81.1 ? 20 OE1 ? A GLU 203 ? A GLU 204 ? 1_555 GD ? C GD . ? A GD 502 ? 1_555 O ? D HOH . ? A HOH 727 ? 1_555 91.3 ? 21 O ? D HOH . ? A HOH 674 ? 1_555 GD ? C GD . ? A GD 502 ? 1_555 O ? D HOH . ? A HOH 727 ? 1_555 125.6 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-12-11 2 'Structure model' 1 1 2014-01-08 3 'Structure model' 1 2 2023-09-20 4 'Structure model' 1 3 2023-12-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' 6 4 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' pdbx_struct_conn_angle 6 3 'Structure model' struct_conn 7 3 'Structure model' struct_ref_seq_dif 8 3 'Structure model' struct_site 9 4 'Structure model' chem_comp_atom 10 4 'Structure model' chem_comp_bond # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 10 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 11 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 12 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 13 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 14 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 15 3 'Structure model' '_pdbx_struct_conn_angle.value' 16 3 'Structure model' '_struct_conn.pdbx_dist_value' 17 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 18 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 19 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 20 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 21 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 22 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 23 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 24 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 25 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 26 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 27 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 28 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 29 3 'Structure model' '_struct_ref_seq_dif.details' 30 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 31 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 32 3 'Structure model' '_struct_site.pdbx_auth_seq_id' 33 4 'Structure model' '_chem_comp_atom.atom_id' 34 4 'Structure model' '_chem_comp_bond.atom_id_2' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SERGUI 'data collection' . ? 1 MOLREP phasing . ? 2 REFMAC refinement 5.2.0019 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # _pdbx_entry_details.entry_id 4L12 _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details 'RESIDUE SER 65 UNDERWENT MUTATION TO THR 65. THR 65, TYR 66, AND GLY 67 CIRCULARIZED INTO ONE CHROMOPHORE.' _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASN _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 159 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id B _pdbx_validate_torsion.phi -44.95 _pdbx_validate_torsion.psi 104.80 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CRO N1 N N N 74 CRO CA1 C N R 75 CRO CB1 C N R 76 CRO CG1 C N N 77 CRO OG1 O N N 78 CRO C1 C N N 79 CRO N2 N N N 80 CRO N3 N N N 81 CRO C2 C N N 82 CRO O2 O N N 83 CRO CA2 C N N 84 CRO CA3 C N N 85 CRO C3 C N N 86 CRO O3 O N N 87 CRO CB2 C N N 88 CRO CG2 C Y N 89 CRO CD1 C Y N 90 CRO CD2 C Y N 91 CRO CE1 C Y N 92 CRO CE2 C Y N 93 CRO CZ C Y N 94 CRO OH O N N 95 CRO OXT O N N 96 CRO H H N N 97 CRO H2 H N N 98 CRO HA1 H N N 99 CRO HB1 H N N 100 CRO HG11 H N N 101 CRO HG12 H N N 102 CRO HG13 H N N 103 CRO HOG1 H N N 104 CRO HA31 H N N 105 CRO HA32 H N N 106 CRO HXT H N N 107 CRO HB2 H N N 108 CRO HD1 H N N 109 CRO HD2 H N N 110 CRO HE1 H N N 111 CRO HE2 H N N 112 CRO HOH H N N 113 CYS N N N N 114 CYS CA C N R 115 CYS C C N N 116 CYS O O N N 117 CYS CB C N N 118 CYS SG S N N 119 CYS OXT O N N 120 CYS H H N N 121 CYS H2 H N N 122 CYS HA H N N 123 CYS HB2 H N N 124 CYS HB3 H N N 125 CYS HG H N N 126 CYS HXT H N N 127 GD GD GD N N 128 GLN N N N N 129 GLN CA C N S 130 GLN C C N N 131 GLN O O N N 132 GLN CB C N N 133 GLN CG C N N 134 GLN CD C N N 135 GLN OE1 O N N 136 GLN NE2 N N N 137 GLN OXT O N N 138 GLN H H N N 139 GLN H2 H N N 140 GLN HA H N N 141 GLN HB2 H N N 142 GLN HB3 H N N 143 GLN HG2 H N N 144 GLN HG3 H N N 145 GLN HE21 H N N 146 GLN HE22 H N N 147 GLN HXT H N N 148 GLU N N N N 149 GLU CA C N S 150 GLU C C N N 151 GLU O O N N 152 GLU CB C N N 153 GLU CG C N N 154 GLU CD C N N 155 GLU OE1 O N N 156 GLU OE2 O N N 157 GLU OXT O N N 158 GLU H H N N 159 GLU H2 H N N 160 GLU HA H N N 161 GLU HB2 H N N 162 GLU HB3 H N N 163 GLU HG2 H N N 164 GLU HG3 H N N 165 GLU HE2 H N N 166 GLU HXT H N N 167 GLY N N N N 168 GLY CA C N N 169 GLY C C N N 170 GLY O O N N 171 GLY OXT O N N 172 GLY H H N N 173 GLY H2 H N N 174 GLY HA2 H N N 175 GLY HA3 H N N 176 GLY HXT H N N 177 HIS N N N N 178 HIS CA C N S 179 HIS C C N N 180 HIS O O N N 181 HIS CB C N N 182 HIS CG C Y N 183 HIS ND1 N Y N 184 HIS CD2 C Y N 185 HIS CE1 C Y N 186 HIS NE2 N Y N 187 HIS OXT O N N 188 HIS H H N N 189 HIS H2 H N N 190 HIS HA H N N 191 HIS HB2 H N N 192 HIS HB3 H N N 193 HIS HD1 H N N 194 HIS HD2 H N N 195 HIS HE1 H N N 196 HIS HE2 H N N 197 HIS HXT H N N 198 HOH O O N N 199 HOH H1 H N N 200 HOH H2 H N N 201 ILE N N N N 202 ILE CA C N S 203 ILE C C N N 204 ILE O O N N 205 ILE CB C N S 206 ILE CG1 C N N 207 ILE CG2 C N N 208 ILE CD1 C N N 209 ILE OXT O N N 210 ILE H H N N 211 ILE H2 H N N 212 ILE HA H N N 213 ILE HB H N N 214 ILE HG12 H N N 215 ILE HG13 H N N 216 ILE HG21 H N N 217 ILE HG22 H N N 218 ILE HG23 H N N 219 ILE HD11 H N N 220 ILE HD12 H N N 221 ILE HD13 H N N 222 ILE HXT H N N 223 LEU N N N N 224 LEU CA C N S 225 LEU C C N N 226 LEU O O N N 227 LEU CB C N N 228 LEU CG C N N 229 LEU CD1 C N N 230 LEU CD2 C N N 231 LEU OXT O N N 232 LEU H H N N 233 LEU H2 H N N 234 LEU HA H N N 235 LEU HB2 H N N 236 LEU HB3 H N N 237 LEU HG H N N 238 LEU HD11 H N N 239 LEU HD12 H N N 240 LEU HD13 H N N 241 LEU HD21 H N N 242 LEU HD22 H N N 243 LEU HD23 H N N 244 LEU HXT H N N 245 LYS N N N N 246 LYS CA C N S 247 LYS C C N N 248 LYS O O N N 249 LYS CB C N N 250 LYS CG C N N 251 LYS CD C N N 252 LYS CE C N N 253 LYS NZ N N N 254 LYS OXT O N N 255 LYS H H N N 256 LYS H2 H N N 257 LYS HA H N N 258 LYS HB2 H N N 259 LYS HB3 H N N 260 LYS HG2 H N N 261 LYS HG3 H N N 262 LYS HD2 H N N 263 LYS HD3 H N N 264 LYS HE2 H N N 265 LYS HE3 H N N 266 LYS HZ1 H N N 267 LYS HZ2 H N N 268 LYS HZ3 H N N 269 LYS HXT H N N 270 MET N N N N 271 MET CA C N S 272 MET C C N N 273 MET O O N N 274 MET CB C N N 275 MET CG C N N 276 MET SD S N N 277 MET CE C N N 278 MET OXT O N N 279 MET H H N N 280 MET H2 H N N 281 MET HA H N N 282 MET HB2 H N N 283 MET HB3 H N N 284 MET HG2 H N N 285 MET HG3 H N N 286 MET HE1 H N N 287 MET HE2 H N N 288 MET HE3 H N N 289 MET HXT H N N 290 PHE N N N N 291 PHE CA C N S 292 PHE C C N N 293 PHE O O N N 294 PHE CB C N N 295 PHE CG C Y N 296 PHE CD1 C Y N 297 PHE CD2 C Y N 298 PHE CE1 C Y N 299 PHE CE2 C Y N 300 PHE CZ C Y N 301 PHE OXT O N N 302 PHE H H N N 303 PHE H2 H N N 304 PHE HA H N N 305 PHE HB2 H N N 306 PHE HB3 H N N 307 PHE HD1 H N N 308 PHE HD2 H N N 309 PHE HE1 H N N 310 PHE HE2 H N N 311 PHE HZ H N N 312 PHE HXT H N N 313 PRO N N N N 314 PRO CA C N S 315 PRO C C N N 316 PRO O O N N 317 PRO CB C N N 318 PRO CG C N N 319 PRO CD C N N 320 PRO OXT O N N 321 PRO H H N N 322 PRO HA H N N 323 PRO HB2 H N N 324 PRO HB3 H N N 325 PRO HG2 H N N 326 PRO HG3 H N N 327 PRO HD2 H N N 328 PRO HD3 H N N 329 PRO HXT H N N 330 SER N N N N 331 SER CA C N S 332 SER C C N N 333 SER O O N N 334 SER CB C N N 335 SER OG O N N 336 SER OXT O N N 337 SER H H N N 338 SER H2 H N N 339 SER HA H N N 340 SER HB2 H N N 341 SER HB3 H N N 342 SER HG H N N 343 SER HXT H N N 344 THR N N N N 345 THR CA C N S 346 THR C C N N 347 THR O O N N 348 THR CB C N R 349 THR OG1 O N N 350 THR CG2 C N N 351 THR OXT O N N 352 THR H H N N 353 THR H2 H N N 354 THR HA H N N 355 THR HB H N N 356 THR HG1 H N N 357 THR HG21 H N N 358 THR HG22 H N N 359 THR HG23 H N N 360 THR HXT H N N 361 TRP N N N N 362 TRP CA C N S 363 TRP C C N N 364 TRP O O N N 365 TRP CB C N N 366 TRP CG C Y N 367 TRP CD1 C Y N 368 TRP CD2 C Y N 369 TRP NE1 N Y N 370 TRP CE2 C Y N 371 TRP CE3 C Y N 372 TRP CZ2 C Y N 373 TRP CZ3 C Y N 374 TRP CH2 C Y N 375 TRP OXT O N N 376 TRP H H N N 377 TRP H2 H N N 378 TRP HA H N N 379 TRP HB2 H N N 380 TRP HB3 H N N 381 TRP HD1 H N N 382 TRP HE1 H N N 383 TRP HE3 H N N 384 TRP HZ2 H N N 385 TRP HZ3 H N N 386 TRP HH2 H N N 387 TRP HXT H N N 388 TYR N N N N 389 TYR CA C N S 390 TYR C C N N 391 TYR O O N N 392 TYR CB C N N 393 TYR CG C Y N 394 TYR CD1 C Y N 395 TYR CD2 C Y N 396 TYR CE1 C Y N 397 TYR CE2 C Y N 398 TYR CZ C Y N 399 TYR OH O N N 400 TYR OXT O N N 401 TYR H H N N 402 TYR H2 H N N 403 TYR HA H N N 404 TYR HB2 H N N 405 TYR HB3 H N N 406 TYR HD1 H N N 407 TYR HD2 H N N 408 TYR HE1 H N N 409 TYR HE2 H N N 410 TYR HH H N N 411 TYR HXT H N N 412 VAL N N N N 413 VAL CA C N S 414 VAL C C N N 415 VAL O O N N 416 VAL CB C N N 417 VAL CG1 C N N 418 VAL CG2 C N N 419 VAL OXT O N N 420 VAL H H N N 421 VAL H2 H N N 422 VAL HA H N N 423 VAL HB H N N 424 VAL HG11 H N N 425 VAL HG12 H N N 426 VAL HG13 H N N 427 VAL HG21 H N N 428 VAL HG22 H N N 429 VAL HG23 H N N 430 VAL HXT H N N 431 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CRO CG1 CB1 sing N N 70 CRO OG1 CB1 sing N N 71 CRO CB1 CA1 sing N N 72 CRO N1 CA1 sing N N 73 CRO OH CZ sing N N 74 CRO CE1 CZ doub Y N 75 CRO CE1 CD1 sing Y N 76 CRO CA1 C1 sing N N 77 CRO CZ CE2 sing Y N 78 CRO CD1 CG2 doub Y N 79 CRO N2 C1 doub N N 80 CRO N2 CA2 sing N N 81 CRO C1 N3 sing N N 82 CRO CE2 CD2 doub Y N 83 CRO CG2 CD2 sing Y N 84 CRO CG2 CB2 sing N N 85 CRO N3 CA3 sing N N 86 CRO N3 C2 sing N N 87 CRO CA2 CB2 doub N Z 88 CRO CA2 C2 sing N N 89 CRO CA3 C3 sing N N 90 CRO OXT C3 sing N N 91 CRO C3 O3 doub N N 92 CRO C2 O2 doub N N 93 CRO N1 H sing N N 94 CRO N1 H2 sing N N 95 CRO CA1 HA1 sing N N 96 CRO CB1 HB1 sing N N 97 CRO CG1 HG11 sing N N 98 CRO CG1 HG12 sing N N 99 CRO CG1 HG13 sing N N 100 CRO OG1 HOG1 sing N N 101 CRO CA3 HA31 sing N N 102 CRO CA3 HA32 sing N N 103 CRO OXT HXT sing N N 104 CRO CB2 HB2 sing N N 105 CRO CD1 HD1 sing N N 106 CRO CD2 HD2 sing N N 107 CRO CE1 HE1 sing N N 108 CRO CE2 HE2 sing N N 109 CRO OH HOH sing N N 110 CYS N CA sing N N 111 CYS N H sing N N 112 CYS N H2 sing N N 113 CYS CA C sing N N 114 CYS CA CB sing N N 115 CYS CA HA sing N N 116 CYS C O doub N N 117 CYS C OXT sing N N 118 CYS CB SG sing N N 119 CYS CB HB2 sing N N 120 CYS CB HB3 sing N N 121 CYS SG HG sing N N 122 CYS OXT HXT sing N N 123 GLN N CA sing N N 124 GLN N H sing N N 125 GLN N H2 sing N N 126 GLN CA C sing N N 127 GLN CA CB sing N N 128 GLN CA HA sing N N 129 GLN C O doub N N 130 GLN C OXT sing N N 131 GLN CB CG sing N N 132 GLN CB HB2 sing N N 133 GLN CB HB3 sing N N 134 GLN CG CD sing N N 135 GLN CG HG2 sing N N 136 GLN CG HG3 sing N N 137 GLN CD OE1 doub N N 138 GLN CD NE2 sing N N 139 GLN NE2 HE21 sing N N 140 GLN NE2 HE22 sing N N 141 GLN OXT HXT sing N N 142 GLU N CA sing N N 143 GLU N H sing N N 144 GLU N H2 sing N N 145 GLU CA C sing N N 146 GLU CA CB sing N N 147 GLU CA HA sing N N 148 GLU C O doub N N 149 GLU C OXT sing N N 150 GLU CB CG sing N N 151 GLU CB HB2 sing N N 152 GLU CB HB3 sing N N 153 GLU CG CD sing N N 154 GLU CG HG2 sing N N 155 GLU CG HG3 sing N N 156 GLU CD OE1 doub N N 157 GLU CD OE2 sing N N 158 GLU OE2 HE2 sing N N 159 GLU OXT HXT sing N N 160 GLY N CA sing N N 161 GLY N H sing N N 162 GLY N H2 sing N N 163 GLY CA C sing N N 164 GLY CA HA2 sing N N 165 GLY CA HA3 sing N N 166 GLY C O doub N N 167 GLY C OXT sing N N 168 GLY OXT HXT sing N N 169 HIS N CA sing N N 170 HIS N H sing N N 171 HIS N H2 sing N N 172 HIS CA C sing N N 173 HIS CA CB sing N N 174 HIS CA HA sing N N 175 HIS C O doub N N 176 HIS C OXT sing N N 177 HIS CB CG sing N N 178 HIS CB HB2 sing N N 179 HIS CB HB3 sing N N 180 HIS CG ND1 sing Y N 181 HIS CG CD2 doub Y N 182 HIS ND1 CE1 doub Y N 183 HIS ND1 HD1 sing N N 184 HIS CD2 NE2 sing Y N 185 HIS CD2 HD2 sing N N 186 HIS CE1 NE2 sing Y N 187 HIS CE1 HE1 sing N N 188 HIS NE2 HE2 sing N N 189 HIS OXT HXT sing N N 190 HOH O H1 sing N N 191 HOH O H2 sing N N 192 ILE N CA sing N N 193 ILE N H sing N N 194 ILE N H2 sing N N 195 ILE CA C sing N N 196 ILE CA CB sing N N 197 ILE CA HA sing N N 198 ILE C O doub N N 199 ILE C OXT sing N N 200 ILE CB CG1 sing N N 201 ILE CB CG2 sing N N 202 ILE CB HB sing N N 203 ILE CG1 CD1 sing N N 204 ILE CG1 HG12 sing N N 205 ILE CG1 HG13 sing N N 206 ILE CG2 HG21 sing N N 207 ILE CG2 HG22 sing N N 208 ILE CG2 HG23 sing N N 209 ILE CD1 HD11 sing N N 210 ILE CD1 HD12 sing N N 211 ILE CD1 HD13 sing N N 212 ILE OXT HXT sing N N 213 LEU N CA sing N N 214 LEU N H sing N N 215 LEU N H2 sing N N 216 LEU CA C sing N N 217 LEU CA CB sing N N 218 LEU CA HA sing N N 219 LEU C O doub N N 220 LEU C OXT sing N N 221 LEU CB CG sing N N 222 LEU CB HB2 sing N N 223 LEU CB HB3 sing N N 224 LEU CG CD1 sing N N 225 LEU CG CD2 sing N N 226 LEU CG HG sing N N 227 LEU CD1 HD11 sing N N 228 LEU CD1 HD12 sing N N 229 LEU CD1 HD13 sing N N 230 LEU CD2 HD21 sing N N 231 LEU CD2 HD22 sing N N 232 LEU CD2 HD23 sing N N 233 LEU OXT HXT sing N N 234 LYS N CA sing N N 235 LYS N H sing N N 236 LYS N H2 sing N N 237 LYS CA C sing N N 238 LYS CA CB sing N N 239 LYS CA HA sing N N 240 LYS C O doub N N 241 LYS C OXT sing N N 242 LYS CB CG sing N N 243 LYS CB HB2 sing N N 244 LYS CB HB3 sing N N 245 LYS CG CD sing N N 246 LYS CG HG2 sing N N 247 LYS CG HG3 sing N N 248 LYS CD CE sing N N 249 LYS CD HD2 sing N N 250 LYS CD HD3 sing N N 251 LYS CE NZ sing N N 252 LYS CE HE2 sing N N 253 LYS CE HE3 sing N N 254 LYS NZ HZ1 sing N N 255 LYS NZ HZ2 sing N N 256 LYS NZ HZ3 sing N N 257 LYS OXT HXT sing N N 258 MET N CA sing N N 259 MET N H sing N N 260 MET N H2 sing N N 261 MET CA C sing N N 262 MET CA CB sing N N 263 MET CA HA sing N N 264 MET C O doub N N 265 MET C OXT sing N N 266 MET CB CG sing N N 267 MET CB HB2 sing N N 268 MET CB HB3 sing N N 269 MET CG SD sing N N 270 MET CG HG2 sing N N 271 MET CG HG3 sing N N 272 MET SD CE sing N N 273 MET CE HE1 sing N N 274 MET CE HE2 sing N N 275 MET CE HE3 sing N N 276 MET OXT HXT sing N N 277 PHE N CA sing N N 278 PHE N H sing N N 279 PHE N H2 sing N N 280 PHE CA C sing N N 281 PHE CA CB sing N N 282 PHE CA HA sing N N 283 PHE C O doub N N 284 PHE C OXT sing N N 285 PHE CB CG sing N N 286 PHE CB HB2 sing N N 287 PHE CB HB3 sing N N 288 PHE CG CD1 doub Y N 289 PHE CG CD2 sing Y N 290 PHE CD1 CE1 sing Y N 291 PHE CD1 HD1 sing N N 292 PHE CD2 CE2 doub Y N 293 PHE CD2 HD2 sing N N 294 PHE CE1 CZ doub Y N 295 PHE CE1 HE1 sing N N 296 PHE CE2 CZ sing Y N 297 PHE CE2 HE2 sing N N 298 PHE CZ HZ sing N N 299 PHE OXT HXT sing N N 300 PRO N CA sing N N 301 PRO N CD sing N N 302 PRO N H sing N N 303 PRO CA C sing N N 304 PRO CA CB sing N N 305 PRO CA HA sing N N 306 PRO C O doub N N 307 PRO C OXT sing N N 308 PRO CB CG sing N N 309 PRO CB HB2 sing N N 310 PRO CB HB3 sing N N 311 PRO CG CD sing N N 312 PRO CG HG2 sing N N 313 PRO CG HG3 sing N N 314 PRO CD HD2 sing N N 315 PRO CD HD3 sing N N 316 PRO OXT HXT sing N N 317 SER N CA sing N N 318 SER N H sing N N 319 SER N H2 sing N N 320 SER CA C sing N N 321 SER CA CB sing N N 322 SER CA HA sing N N 323 SER C O doub N N 324 SER C OXT sing N N 325 SER CB OG sing N N 326 SER CB HB2 sing N N 327 SER CB HB3 sing N N 328 SER OG HG sing N N 329 SER OXT HXT sing N N 330 THR N CA sing N N 331 THR N H sing N N 332 THR N H2 sing N N 333 THR CA C sing N N 334 THR CA CB sing N N 335 THR CA HA sing N N 336 THR C O doub N N 337 THR C OXT sing N N 338 THR CB OG1 sing N N 339 THR CB CG2 sing N N 340 THR CB HB sing N N 341 THR OG1 HG1 sing N N 342 THR CG2 HG21 sing N N 343 THR CG2 HG22 sing N N 344 THR CG2 HG23 sing N N 345 THR OXT HXT sing N N 346 TRP N CA sing N N 347 TRP N H sing N N 348 TRP N H2 sing N N 349 TRP CA C sing N N 350 TRP CA CB sing N N 351 TRP CA HA sing N N 352 TRP C O doub N N 353 TRP C OXT sing N N 354 TRP CB CG sing N N 355 TRP CB HB2 sing N N 356 TRP CB HB3 sing N N 357 TRP CG CD1 doub Y N 358 TRP CG CD2 sing Y N 359 TRP CD1 NE1 sing Y N 360 TRP CD1 HD1 sing N N 361 TRP CD2 CE2 doub Y N 362 TRP CD2 CE3 sing Y N 363 TRP NE1 CE2 sing Y N 364 TRP NE1 HE1 sing N N 365 TRP CE2 CZ2 sing Y N 366 TRP CE3 CZ3 doub Y N 367 TRP CE3 HE3 sing N N 368 TRP CZ2 CH2 doub Y N 369 TRP CZ2 HZ2 sing N N 370 TRP CZ3 CH2 sing Y N 371 TRP CZ3 HZ3 sing N N 372 TRP CH2 HH2 sing N N 373 TRP OXT HXT sing N N 374 TYR N CA sing N N 375 TYR N H sing N N 376 TYR N H2 sing N N 377 TYR CA C sing N N 378 TYR CA CB sing N N 379 TYR CA HA sing N N 380 TYR C O doub N N 381 TYR C OXT sing N N 382 TYR CB CG sing N N 383 TYR CB HB2 sing N N 384 TYR CB HB3 sing N N 385 TYR CG CD1 doub Y N 386 TYR CG CD2 sing Y N 387 TYR CD1 CE1 sing Y N 388 TYR CD1 HD1 sing N N 389 TYR CD2 CE2 doub Y N 390 TYR CD2 HD2 sing N N 391 TYR CE1 CZ doub Y N 392 TYR CE1 HE1 sing N N 393 TYR CE2 CZ sing Y N 394 TYR CE2 HE2 sing N N 395 TYR CZ OH sing N N 396 TYR OH HH sing N N 397 TYR OXT HXT sing N N 398 VAL N CA sing N N 399 VAL N H sing N N 400 VAL N H2 sing N N 401 VAL CA C sing N N 402 VAL CA CB sing N N 403 VAL CA HA sing N N 404 VAL C O doub N N 405 VAL C OXT sing N N 406 VAL CB CG1 sing N N 407 VAL CB CG2 sing N N 408 VAL CB HB sing N N 409 VAL CG1 HG11 sing N N 410 VAL CG1 HG12 sing N N 411 VAL CG1 HG13 sing N N 412 VAL CG2 HG21 sing N N 413 VAL CG2 HG22 sing N N 414 VAL CG2 HG23 sing N N 415 VAL OXT HXT sing N N 416 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'GADOLINIUM ATOM' GD 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2OKW _pdbx_initial_refinement_model.details 'PDB ENTRY 2OKW' #