data_4L8N # _entry.id 4L8N # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4L8N pdb_00004l8n 10.2210/pdb4l8n/pdb RCSB RCSB080319 ? ? WWPDB D_1000080319 ? ? # _pdbx_database_related.db_name TargetTrack _pdbx_database_related.db_id JCSG-394759 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 4L8N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2013-06-17 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of a PDZ domain protein (BDI_1242) from Parabacteroides distasonis ATCC 8503 at 2.50 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 4L8N _cell.length_a 104.093 _cell.length_b 104.093 _cell.length_c 96.277 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 6 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4L8N _symmetry.Int_Tables_number 152 _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'PDZ domain protein' 52794.312 1 ? ? 'UNP residues 21-476' ? 2 non-polymer syn ETHANOL 46.068 1 ? ? ? ? 3 non-polymer syn '(4S)-2-METHYL-2,4-PENTANEDIOL' 118.174 1 ? ? ? ? 4 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 5 water nat water 18.015 98 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GAQNRNTSICRLGFTYDISQSKNWGNNKPVIKSIIPYSSAEQAGIKKYDVIEEINGVPVTEVSVDEIPQLLNPAGRNDVL LTISNLSSPSKQVLVKKDCKKSNAITEDQLASAYA(MSE)YSLETTNEQEFVCPFKTTVTSDGVDFGNFKTFAFSTIDEN NRKLETVINECIENELTKKGLTVDIAKPDLLIQTFYFFDKNPNYLGANKVLVEKEPTYRYNFSHSK(MSE)EKFPFLNYA AAEAEAEYLLQFGIRIIDQKDIPGRVLWECEANELLEDSYRLDEYARVHVPL(MSE)C(MSE)QYPYTKYGRNVPFKVSK KTYNYTGISYDIDKLDQVVDVDRNSPAYAAGIRPRDIIEKIGRHK(MSE)DHSAEEFSSAYKRFITNT(MSE)QYRDPKT (MSE)FTDANGFKYC(MSE)FWDVFKYPQIADASQSSDYLPAFSYLYYFAPYINPSGNNACTFNIKRGKTKLEVIIRPTI RSEVTVEIK ; _entity_poly.pdbx_seq_one_letter_code_can ;GAQNRNTSICRLGFTYDISQSKNWGNNKPVIKSIIPYSSAEQAGIKKYDVIEEINGVPVTEVSVDEIPQLLNPAGRNDVL LTISNLSSPSKQVLVKKDCKKSNAITEDQLASAYAMYSLETTNEQEFVCPFKTTVTSDGVDFGNFKTFAFSTIDENNRKL ETVINECIENELTKKGLTVDIAKPDLLIQTFYFFDKNPNYLGANKVLVEKEPTYRYNFSHSKMEKFPFLNYAAAEAEAEY LLQFGIRIIDQKDIPGRVLWECEANELLEDSYRLDEYARVHVPLMCMQYPYTKYGRNVPFKVSKKTYNYTGISYDIDKLD QVVDVDRNSPAYAAGIRPRDIIEKIGRHKMDHSAEEFSSAYKRFITNTMQYRDPKTMFTDANGFKYCMFWDVFKYPQIAD ASQSSDYLPAFSYLYYFAPYINPSGNNACTFNIKRGKTKLEVIIRPTIRSEVTVEIK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier JCSG-394759 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ALA n 1 3 GLN n 1 4 ASN n 1 5 ARG n 1 6 ASN n 1 7 THR n 1 8 SER n 1 9 ILE n 1 10 CYS n 1 11 ARG n 1 12 LEU n 1 13 GLY n 1 14 PHE n 1 15 THR n 1 16 TYR n 1 17 ASP n 1 18 ILE n 1 19 SER n 1 20 GLN n 1 21 SER n 1 22 LYS n 1 23 ASN n 1 24 TRP n 1 25 GLY n 1 26 ASN n 1 27 ASN n 1 28 LYS n 1 29 PRO n 1 30 VAL n 1 31 ILE n 1 32 LYS n 1 33 SER n 1 34 ILE n 1 35 ILE n 1 36 PRO n 1 37 TYR n 1 38 SER n 1 39 SER n 1 40 ALA n 1 41 GLU n 1 42 GLN n 1 43 ALA n 1 44 GLY n 1 45 ILE n 1 46 LYS n 1 47 LYS n 1 48 TYR n 1 49 ASP n 1 50 VAL n 1 51 ILE n 1 52 GLU n 1 53 GLU n 1 54 ILE n 1 55 ASN n 1 56 GLY n 1 57 VAL n 1 58 PRO n 1 59 VAL n 1 60 THR n 1 61 GLU n 1 62 VAL n 1 63 SER n 1 64 VAL n 1 65 ASP n 1 66 GLU n 1 67 ILE n 1 68 PRO n 1 69 GLN n 1 70 LEU n 1 71 LEU n 1 72 ASN n 1 73 PRO n 1 74 ALA n 1 75 GLY n 1 76 ARG n 1 77 ASN n 1 78 ASP n 1 79 VAL n 1 80 LEU n 1 81 LEU n 1 82 THR n 1 83 ILE n 1 84 SER n 1 85 ASN n 1 86 LEU n 1 87 SER n 1 88 SER n 1 89 PRO n 1 90 SER n 1 91 LYS n 1 92 GLN n 1 93 VAL n 1 94 LEU n 1 95 VAL n 1 96 LYS n 1 97 LYS n 1 98 ASP n 1 99 CYS n 1 100 LYS n 1 101 LYS n 1 102 SER n 1 103 ASN n 1 104 ALA n 1 105 ILE n 1 106 THR n 1 107 GLU n 1 108 ASP n 1 109 GLN n 1 110 LEU n 1 111 ALA n 1 112 SER n 1 113 ALA n 1 114 TYR n 1 115 ALA n 1 116 MSE n 1 117 TYR n 1 118 SER n 1 119 LEU n 1 120 GLU n 1 121 THR n 1 122 THR n 1 123 ASN n 1 124 GLU n 1 125 GLN n 1 126 GLU n 1 127 PHE n 1 128 VAL n 1 129 CYS n 1 130 PRO n 1 131 PHE n 1 132 LYS n 1 133 THR n 1 134 THR n 1 135 VAL n 1 136 THR n 1 137 SER n 1 138 ASP n 1 139 GLY n 1 140 VAL n 1 141 ASP n 1 142 PHE n 1 143 GLY n 1 144 ASN n 1 145 PHE n 1 146 LYS n 1 147 THR n 1 148 PHE n 1 149 ALA n 1 150 PHE n 1 151 SER n 1 152 THR n 1 153 ILE n 1 154 ASP n 1 155 GLU n 1 156 ASN n 1 157 ASN n 1 158 ARG n 1 159 LYS n 1 160 LEU n 1 161 GLU n 1 162 THR n 1 163 VAL n 1 164 ILE n 1 165 ASN n 1 166 GLU n 1 167 CYS n 1 168 ILE n 1 169 GLU n 1 170 ASN n 1 171 GLU n 1 172 LEU n 1 173 THR n 1 174 LYS n 1 175 LYS n 1 176 GLY n 1 177 LEU n 1 178 THR n 1 179 VAL n 1 180 ASP n 1 181 ILE n 1 182 ALA n 1 183 LYS n 1 184 PRO n 1 185 ASP n 1 186 LEU n 1 187 LEU n 1 188 ILE n 1 189 GLN n 1 190 THR n 1 191 PHE n 1 192 TYR n 1 193 PHE n 1 194 PHE n 1 195 ASP n 1 196 LYS n 1 197 ASN n 1 198 PRO n 1 199 ASN n 1 200 TYR n 1 201 LEU n 1 202 GLY n 1 203 ALA n 1 204 ASN n 1 205 LYS n 1 206 VAL n 1 207 LEU n 1 208 VAL n 1 209 GLU n 1 210 LYS n 1 211 GLU n 1 212 PRO n 1 213 THR n 1 214 TYR n 1 215 ARG n 1 216 TYR n 1 217 ASN n 1 218 PHE n 1 219 SER n 1 220 HIS n 1 221 SER n 1 222 LYS n 1 223 MSE n 1 224 GLU n 1 225 LYS n 1 226 PHE n 1 227 PRO n 1 228 PHE n 1 229 LEU n 1 230 ASN n 1 231 TYR n 1 232 ALA n 1 233 ALA n 1 234 ALA n 1 235 GLU n 1 236 ALA n 1 237 GLU n 1 238 ALA n 1 239 GLU n 1 240 TYR n 1 241 LEU n 1 242 LEU n 1 243 GLN n 1 244 PHE n 1 245 GLY n 1 246 ILE n 1 247 ARG n 1 248 ILE n 1 249 ILE n 1 250 ASP n 1 251 GLN n 1 252 LYS n 1 253 ASP n 1 254 ILE n 1 255 PRO n 1 256 GLY n 1 257 ARG n 1 258 VAL n 1 259 LEU n 1 260 TRP n 1 261 GLU n 1 262 CYS n 1 263 GLU n 1 264 ALA n 1 265 ASN n 1 266 GLU n 1 267 LEU n 1 268 LEU n 1 269 GLU n 1 270 ASP n 1 271 SER n 1 272 TYR n 1 273 ARG n 1 274 LEU n 1 275 ASP n 1 276 GLU n 1 277 TYR n 1 278 ALA n 1 279 ARG n 1 280 VAL n 1 281 HIS n 1 282 VAL n 1 283 PRO n 1 284 LEU n 1 285 MSE n 1 286 CYS n 1 287 MSE n 1 288 GLN n 1 289 TYR n 1 290 PRO n 1 291 TYR n 1 292 THR n 1 293 LYS n 1 294 TYR n 1 295 GLY n 1 296 ARG n 1 297 ASN n 1 298 VAL n 1 299 PRO n 1 300 PHE n 1 301 LYS n 1 302 VAL n 1 303 SER n 1 304 LYS n 1 305 LYS n 1 306 THR n 1 307 TYR n 1 308 ASN n 1 309 TYR n 1 310 THR n 1 311 GLY n 1 312 ILE n 1 313 SER n 1 314 TYR n 1 315 ASP n 1 316 ILE n 1 317 ASP n 1 318 LYS n 1 319 LEU n 1 320 ASP n 1 321 GLN n 1 322 VAL n 1 323 VAL n 1 324 ASP n 1 325 VAL n 1 326 ASP n 1 327 ARG n 1 328 ASN n 1 329 SER n 1 330 PRO n 1 331 ALA n 1 332 TYR n 1 333 ALA n 1 334 ALA n 1 335 GLY n 1 336 ILE n 1 337 ARG n 1 338 PRO n 1 339 ARG n 1 340 ASP n 1 341 ILE n 1 342 ILE n 1 343 GLU n 1 344 LYS n 1 345 ILE n 1 346 GLY n 1 347 ARG n 1 348 HIS n 1 349 LYS n 1 350 MSE n 1 351 ASP n 1 352 HIS n 1 353 SER n 1 354 ALA n 1 355 GLU n 1 356 GLU n 1 357 PHE n 1 358 SER n 1 359 SER n 1 360 ALA n 1 361 TYR n 1 362 LYS n 1 363 ARG n 1 364 PHE n 1 365 ILE n 1 366 THR n 1 367 ASN n 1 368 THR n 1 369 MSE n 1 370 GLN n 1 371 TYR n 1 372 ARG n 1 373 ASP n 1 374 PRO n 1 375 LYS n 1 376 THR n 1 377 MSE n 1 378 PHE n 1 379 THR n 1 380 ASP n 1 381 ALA n 1 382 ASN n 1 383 GLY n 1 384 PHE n 1 385 LYS n 1 386 TYR n 1 387 CYS n 1 388 MSE n 1 389 PHE n 1 390 TRP n 1 391 ASP n 1 392 VAL n 1 393 PHE n 1 394 LYS n 1 395 TYR n 1 396 PRO n 1 397 GLN n 1 398 ILE n 1 399 ALA n 1 400 ASP n 1 401 ALA n 1 402 SER n 1 403 GLN n 1 404 SER n 1 405 SER n 1 406 ASP n 1 407 TYR n 1 408 LEU n 1 409 PRO n 1 410 ALA n 1 411 PHE n 1 412 SER n 1 413 TYR n 1 414 LEU n 1 415 TYR n 1 416 TYR n 1 417 PHE n 1 418 ALA n 1 419 PRO n 1 420 TYR n 1 421 ILE n 1 422 ASN n 1 423 PRO n 1 424 SER n 1 425 GLY n 1 426 ASN n 1 427 ASN n 1 428 ALA n 1 429 CYS n 1 430 THR n 1 431 PHE n 1 432 ASN n 1 433 ILE n 1 434 LYS n 1 435 ARG n 1 436 GLY n 1 437 LYS n 1 438 THR n 1 439 LYS n 1 440 LEU n 1 441 GLU n 1 442 VAL n 1 443 ILE n 1 444 ILE n 1 445 ARG n 1 446 PRO n 1 447 THR n 1 448 ILE n 1 449 ARG n 1 450 SER n 1 451 GLU n 1 452 VAL n 1 453 THR n 1 454 VAL n 1 455 GLU n 1 456 ILE n 1 457 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene BDI_1242 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 8503 / DSM 20701 / NCTC 11152' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Parabacteroides distasonis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 435591 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A6LBD9_PARD8 _struct_ref.pdbx_db_accession A6LBD9 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;AQNRNTSICRLGFTYDISQSKNWGNNKPVIKSIIPYSSAEQAGIKKYDVIEEINGVPVTEVSVDEIPQLLNPAGRNDVLL TISNLSSPSKQVLVKKDCKKSNAITEDQLASAYAMYSLETTNEQEFVCPFKTTVTSDGVDFGNFKTFAFSTIDENNRKLE TVINECIENELTKKGLTVDIAKPDLLIQTFYFFDKNPNYLGANKVLVEKEPTYRYNFSHSKMEKFPFLNYAAAEAEAEYL LQFGIRIIDQKDIPGRVLWECEANELLEDSYRLDEYARVHVPLMCMQYPYTKYGRNVPFKVSKKTYNYTGISYDIDKLDQ VVDVDRNSPAYAAGIRPRDIIEKIGRHKMDHSAEEFSSAYKRFITNTMQYRDPKTMFTDANGFKYCMFWDVFKYPQIADA SQSSDYLPAFSYLYYFAPYINPSGNNACTFNIKRGKTKLEVIIRPTIRSEVTVEIK ; _struct_ref.pdbx_align_begin 21 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4L8N _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 457 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession A6LBD9 _struct_ref_seq.db_align_beg 21 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 476 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 21 _struct_ref_seq.pdbx_auth_seq_align_end 476 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 4L8N _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code A6LBD9 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 0 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EOH non-polymer . ETHANOL ? 'C2 H6 O' 46.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 MPD non-polymer . '(4S)-2-METHYL-2,4-PENTANEDIOL' ? 'C6 H14 O2' 118.174 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 4L8N # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.85 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 56.87 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '42.00% Ethanol, 0.0500M magnesium chloride, 0.1M TRIS pH 8.0, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.details 'Flat mirror (vertical focusing); single crystal Si(111) bent monochromator (horizontal focusing)' _diffrn_detector.pdbx_collection_date 2013-05-24 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'single crystal Si(111) bent' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.97882 1.0 2 0.91837 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_wavelength_list 0.97882,0.91837 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 4L8N _reflns.d_resolution_high 2.50 _reflns.d_resolution_low 48.138 _reflns.number_obs 21215 _reflns.pdbx_Rmerge_I_obs 0.067 _reflns.pdbx_netI_over_sigmaI 16.460 _reflns.percent_possible_obs 99.500 _reflns.B_iso_Wilson_estimate 71.778 _reflns.observed_criterion_sigma_I -3.000 _reflns.observed_criterion_sigma_F ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy 6.55 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_chi_squared 2.500 2.570 10286 ? 1544 1.147 1.580 ? 6.66 ? ? 99.500 1 1 ? 2.570 2.640 10187 ? 1525 0.912 2.0 ? ? ? ? 99.900 2 1 ? 2.640 2.710 9574 ? 1450 0.685 2.7 ? ? ? ? 99.700 3 1 ? 2.710 2.800 8822 ? 1432 0.551 3.2 ? ? ? ? 99.700 4 1 ? 2.800 2.890 8992 ? 1383 0.384 4.5 ? ? ? ? 99.100 5 1 ? 2.890 2.990 9250 ? 1338 0.273 6.3 ? ? ? ? 99.900 6 1 ? 2.990 3.100 8907 ? 1309 0.205 8.1 ? ? ? ? 99.800 7 1 ? 3.100 3.230 8449 ? 1250 0.151 10.7 ? ? ? ? 100.000 8 1 ? 3.230 3.370 8142 ? 1203 0.110 14.3 ? ? ? ? 99.900 9 1 ? 3.370 3.540 7553 ? 1154 0.080 18.4 ? ? ? ? 99.700 10 1 ? 3.540 3.730 6368 ? 1073 0.062 21.9 ? ? ? ? 98.100 11 1 ? 3.730 3.950 7196 ? 1039 0.051 28.1 ? ? ? ? 99.800 12 1 ? 3.950 4.230 6614 ? 965 0.041 32.5 ? ? ? ? 100.000 13 1 ? 4.230 4.560 6280 ? 936 0.036 36.0 ? ? ? ? 99.900 14 1 ? 4.560 5.000 5481 ? 843 0.036 36.7 ? ? ? ? 100.000 15 1 ? 5.000 5.590 4330 ? 750 0.045 35.2 ? ? ? ? 97.500 16 1 ? 5.590 6.460 4690 ? 702 0.046 38.8 ? ? ? ? 99.900 17 1 ? 6.460 7.910 3682 ? 588 0.048 38.9 ? ? ? ? 100.000 18 1 ? 7.910 11.180 2459 ? 449 0.034 42.9 ? ? ? ? 97.400 19 1 ? 11.180 48.140 1660 ? 282 0.030 48.2 ? ? ? ? 97.600 20 1 ? # _refine.entry_id 4L8N _refine.ls_d_res_high 2.5000 _refine.ls_d_res_low 48.138 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.5300 _refine.ls_number_reflns_obs 21175 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 2. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U FACTORS. 3. MG, MPD, AND EOH MODELED ARE PRESENT IN PROTEIN/CRYO CONDITIONS. 4. THE MAD PHASES WERE USED AS RESTRAINTS DURING REFINEMENT. OTHER REFINEMENT REMARKS: 1. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 2. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U FACTORS. 3. MG, MPD, AND EOH MODELED ARE PRESENT IN PROTEIN/CRYO CONDITIONS. 4. THE MAD PHASES WERE USED AS RESTRAINTS DURING REFINEMENT. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1879 _refine.ls_R_factor_R_work 0.1863 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2195 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.0900 _refine.ls_number_reflns_R_free 1077 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 75.5429 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 5.1649 _refine.aniso_B[2][2] 5.1649 _refine.aniso_B[3][3] -10.3298 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9503 _refine.correlation_coeff_Fo_to_Fc_free 0.9336 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.solvent_model_details ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 171.630 _refine.B_iso_min 31.090 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 0.200 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 4L8N _refine_analyze.Luzzati_coordinate_error_obs 0.410 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3575 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 12 _refine_hist.number_atoms_solvent 98 _refine_hist.number_atoms_total 3685 _refine_hist.d_res_high 2.5000 _refine_hist.d_res_low 48.138 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id t_dihedral_angle_d 1694 ? ? 2.000 SINUSOIDAL 'X-RAY DIFFRACTION' t_trig_c_planes 99 ? ? 2.000 HARMONIC 'X-RAY DIFFRACTION' t_gen_planes 524 ? ? 5.000 HARMONIC 'X-RAY DIFFRACTION' t_it 3676 ? ? 20.000 HARMONIC 'X-RAY DIFFRACTION' t_nbd 4 ? ? 5.000 SEMIHARMONIC 'X-RAY DIFFRACTION' t_improper_torsion ? ? ? ? ? 'X-RAY DIFFRACTION' t_pseud_angle ? ? ? ? ? 'X-RAY DIFFRACTION' t_chiral_improper_torsion 494 ? ? 5.000 SEMIHARMONIC 'X-RAY DIFFRACTION' t_sum_occupancies ? ? ? ? ? 'X-RAY DIFFRACTION' t_utility_distance ? ? ? ? ? 'X-RAY DIFFRACTION' t_utility_angle ? ? ? ? ? 'X-RAY DIFFRACTION' t_utility_torsion ? ? ? ? ? 'X-RAY DIFFRACTION' t_ideal_dist_contact 4078 ? ? 4.000 SEMIHARMONIC 'X-RAY DIFFRACTION' t_bond_d 3676 0.010 ? 2.000 HARMONIC 'X-RAY DIFFRACTION' t_angle_deg 4987 1.080 ? 2.000 HARMONIC 'X-RAY DIFFRACTION' t_omega_torsion ? 3.390 ? ? ? 'X-RAY DIFFRACTION' t_other_torsion ? 3.090 ? ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 2.5000 _refine_ls_shell.d_res_low 2.6200 _refine_ls_shell.pdbx_total_number_of_bins_used 11 _refine_ls_shell.percent_reflns_obs 99.5300 _refine_ls_shell.number_reflns_R_work 2656 _refine_ls_shell.R_factor_all 0.2286 _refine_ls_shell.R_factor_R_work 0.2264 _refine_ls_shell.R_factor_R_free 0.2685 _refine_ls_shell.percent_reflns_R_free 5.0400 _refine_ls_shell.number_reflns_R_free 141 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 2797 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4L8N _struct.title 'Crystal structure of a PDZ domain protein (BDI_1242) from Parabacteroides distasonis ATCC 8503 at 2.50 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;N-terminal and C-terminal PDZ domains, DUF4136 domain, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-BIOLOGY, UNKNOWN FUNCTION ; _struct_keywords.pdbx_keywords 'STRUCTURAL GENOMICS, UNKNOWN FUNCTION' _struct_keywords.entry_id 4L8N # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 38 ? GLY A 44 ? SER A 57 GLY A 63 1 ? 7 HELX_P HELX_P2 2 THR A 60 ? VAL A 62 ? THR A 79 VAL A 81 5 ? 3 HELX_P HELX_P3 3 SER A 63 ? ASP A 65 ? SER A 82 ASP A 84 5 ? 3 HELX_P HELX_P4 4 GLU A 66 ? ASN A 72 ? GLU A 85 ASN A 91 1 ? 7 HELX_P HELX_P5 5 THR A 106 ? TYR A 114 ? THR A 125 TYR A 133 1 ? 9 HELX_P HELX_P6 6 ALA A 115 ? SER A 118 ? ALA A 134 SER A 137 5 ? 4 HELX_P HELX_P7 7 ASP A 141 ? PHE A 145 ? ASP A 160 PHE A 164 5 ? 5 HELX_P HELX_P8 8 ASP A 154 ? ASN A 156 ? ASP A 173 ASN A 175 5 ? 3 HELX_P HELX_P9 9 ASN A 157 ? GLY A 176 ? ASN A 176 GLY A 195 1 ? 20 HELX_P HELX_P10 10 TYR A 231 ? GLU A 237 ? TYR A 250 GLU A 256 1 ? 7 HELX_P HELX_P11 11 ARG A 273 ? CYS A 286 ? ARG A 292 CYS A 305 1 ? 14 HELX_P HELX_P12 12 MSE A 287 ? TYR A 289 ? MSE A 306 TYR A 308 5 ? 3 HELX_P HELX_P13 13 SER A 329 ? ALA A 334 ? SER A 348 ALA A 353 1 ? 6 HELX_P HELX_P14 14 SER A 353 ? THR A 368 ? SER A 372 THR A 387 1 ? 16 HELX_P HELX_P15 15 MSE A 369 ? ARG A 372 ? MSE A 388 ARG A 391 5 ? 4 HELX_P HELX_P16 16 ASP A 373 ? MSE A 377 ? ASP A 392 MSE A 396 5 ? 5 HELX_P HELX_P17 17 ASP A 391 ? PHE A 393 ? ASP A 410 PHE A 412 5 ? 3 HELX_P HELX_P18 18 LYS A 394 ? GLN A 403 ? LYS A 413 GLN A 422 1 ? 10 HELX_P HELX_P19 19 SER A 404 ? LEU A 408 ? SER A 423 LEU A 427 5 ? 5 HELX_P HELX_P20 20 PRO A 409 ? TYR A 416 ? PRO A 428 TYR A 435 5 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ALA 115 C ? ? ? 1_555 A MSE 116 N ? ? A ALA 134 A MSE 135 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale2 covale both ? A MSE 116 C ? ? ? 1_555 A TYR 117 N ? ? A MSE 135 A TYR 136 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale3 covale both ? A LYS 222 C ? ? ? 1_555 A MSE 223 N ? ? A LYS 241 A MSE 242 1_555 ? ? ? ? ? ? ? 1.354 ? ? covale4 covale both ? A MSE 223 C ? ? ? 1_555 A GLU 224 N ? ? A MSE 242 A GLU 243 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale5 covale both ? A LEU 284 C ? ? ? 1_555 A MSE 285 N ? ? A LEU 303 A MSE 304 1_555 ? ? ? ? ? ? ? 1.352 ? ? covale6 covale both ? A MSE 285 C ? ? ? 1_555 A CYS 286 N ? ? A MSE 304 A CYS 305 1_555 ? ? ? ? ? ? ? 1.344 ? ? covale7 covale both ? A CYS 286 C ? ? ? 1_555 A MSE 287 N ? ? A CYS 305 A MSE 306 1_555 ? ? ? ? ? ? ? 1.350 ? ? covale8 covale both ? A MSE 287 C ? ? ? 1_555 A GLN 288 N ? ? A MSE 306 A GLN 307 1_555 ? ? ? ? ? ? ? 1.362 ? ? covale9 covale both ? A LYS 349 C ? ? ? 1_555 A MSE 350 N ? ? A LYS 368 A MSE 369 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale10 covale both ? A MSE 350 C ? ? ? 1_555 A ASP 351 N ? ? A MSE 369 A ASP 370 1_555 ? ? ? ? ? ? ? 1.361 ? ? covale11 covale both ? A THR 368 C ? ? ? 1_555 A MSE 369 N ? ? A THR 387 A MSE 388 1_555 ? ? ? ? ? ? ? 1.359 ? ? covale12 covale both ? A MSE 369 C ? ? ? 1_555 A GLN 370 N ? ? A MSE 388 A GLN 389 1_555 ? ? ? ? ? ? ? 1.340 ? ? covale13 covale both ? A THR 376 C ? ? ? 1_555 A MSE 377 N ? ? A THR 395 A MSE 396 1_555 ? ? ? ? ? ? ? 1.368 ? ? covale14 covale both ? A MSE 377 C ? ? ? 1_555 A PHE 378 N ? ? A MSE 396 A PHE 397 1_555 ? ? ? ? ? ? ? 1.344 ? ? covale15 covale both ? A CYS 387 C ? ? ? 1_555 A MSE 388 N ? ? A CYS 406 A MSE 407 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale16 covale both ? A MSE 388 C ? ? ? 1_555 A PHE 389 N ? ? A MSE 407 A PHE 408 1_555 ? ? ? ? ? ? ? 1.337 ? ? metalc1 metalc ? ? A GLU 239 OE2 ? ? ? 1_555 D MG . MG ? ? A GLU 258 A MG 503 1_555 ? ? ? ? ? ? ? 2.507 ? ? metalc2 metalc ? ? A GLU 239 OE1 ? ? ? 1_555 D MG . MG ? ? A GLU 258 A MG 503 1_555 ? ? ? ? ? ? ? 2.709 ? ? metalc3 metalc ? ? D MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 503 A HOH 683 1_555 ? ? ? ? ? ? ? 1.949 ? ? metalc4 metalc ? ? D MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 503 A HOH 698 1_555 ? ? ? ? ? ? ? 1.946 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id TYR _struct_mon_prot_cis.label_seq_id 289 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id TYR _struct_mon_prot_cis.auth_seq_id 308 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 290 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 309 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 5.33 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 2 ? C ? 4 ? D ? 3 ? E ? 3 ? F ? 6 ? G ? 2 ? H ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel F 3 4 ? anti-parallel F 4 5 ? parallel F 5 6 ? parallel G 1 2 ? anti-parallel H 1 2 ? anti-parallel H 2 3 ? anti-parallel H 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER A 8 ? ARG A 11 ? SER A 27 ARG A 30 A 2 ASP A 98 ? LYS A 101 ? ASP A 117 LYS A 120 B 1 PHE A 14 ? ILE A 18 ? PHE A 33 ILE A 37 B 2 PRO A 29 ? ILE A 34 ? PRO A 48 ILE A 53 C 1 VAL A 57 ? PRO A 58 ? VAL A 76 PRO A 77 C 2 VAL A 50 ? ILE A 54 ? VAL A 69 ILE A 73 C 3 ASP A 78 ? SER A 84 ? ASP A 97 SER A 103 C 4 LYS A 91 ? LYS A 96 ? LYS A 110 LYS A 115 D 1 ALA A 104 ? ILE A 105 ? ALA A 123 ILE A 124 D 2 ILE A 312 ? ASP A 315 ? ILE A 331 ASP A 334 D 3 VAL A 322 ? VAL A 325 ? VAL A 341 VAL A 344 E 1 ASN A 123 ? CYS A 129 ? ASN A 142 CYS A 148 E 2 VAL A 298 ? TYR A 309 ? VAL A 317 TYR A 328 E 3 THR A 447 ? ILE A 456 ? THR A 466 ILE A 475 F 1 PHE A 131 ? VAL A 135 ? PHE A 150 VAL A 154 F 2 VAL A 258 ? LEU A 268 ? VAL A 277 LEU A 287 F 3 TYR A 240 ? ASP A 250 ? TYR A 259 ASP A 269 F 4 LEU A 186 ? LYS A 196 ? LEU A 205 LYS A 215 F 5 THR A 147 ? PHE A 150 ? THR A 166 PHE A 169 F 6 THR A 178 ? VAL A 179 ? THR A 197 VAL A 198 G 1 GLU A 211 ? ASN A 217 ? GLU A 230 ASN A 236 G 2 LYS A 222 ? ASN A 230 ? LYS A 241 ASN A 249 H 1 HIS A 348 ? LYS A 349 ? HIS A 367 LYS A 368 H 2 ILE A 341 ? ILE A 345 ? ILE A 360 ILE A 364 H 3 CYS A 429 ? ARG A 435 ? CYS A 448 ARG A 454 H 4 THR A 438 ? ILE A 444 ? THR A 457 ILE A 463 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 9 ? N ILE A 28 O LYS A 100 ? O LYS A 119 B 1 2 N THR A 15 ? N THR A 34 O SER A 33 ? O SER A 52 C 1 2 O VAL A 57 ? O VAL A 76 N ILE A 54 ? N ILE A 73 C 2 3 N VAL A 50 ? N VAL A 69 O SER A 84 ? O SER A 103 C 3 4 N LEU A 81 ? N LEU A 100 O VAL A 93 ? O VAL A 112 D 1 2 N ILE A 105 ? N ILE A 124 O TYR A 314 ? O TYR A 333 D 2 3 N SER A 313 ? N SER A 332 O VAL A 323 ? O VAL A 342 E 1 2 N PHE A 127 ? N PHE A 146 O PHE A 300 ? O PHE A 319 E 2 3 N TYR A 309 ? N TYR A 328 O THR A 447 ? O THR A 466 F 1 2 N LYS A 132 ? N LYS A 151 O GLU A 263 ? O GLU A 282 F 2 3 O ALA A 264 ? O ALA A 283 N PHE A 244 ? N PHE A 263 F 3 4 O LEU A 241 ? O LEU A 260 N ASP A 195 ? N ASP A 214 F 4 5 O ILE A 188 ? O ILE A 207 N ALA A 149 ? N ALA A 168 F 5 6 N PHE A 148 ? N PHE A 167 O THR A 178 ? O THR A 197 G 1 2 N ASN A 217 ? N ASN A 236 O LYS A 222 ? O LYS A 241 H 1 2 O HIS A 348 ? O HIS A 367 N ILE A 345 ? N ILE A 364 H 2 3 N GLU A 343 ? N GLU A 362 O ASN A 432 ? O ASN A 451 H 3 4 N CYS A 429 ? N CYS A 448 O ILE A 444 ? O ILE A 463 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A EOH 501 ? 1 'BINDING SITE FOR RESIDUE EOH A 501' AC2 Software A MPD 502 ? 4 'BINDING SITE FOR RESIDUE MPD A 502' AC3 Software A MG 503 ? 8 'BINDING SITE FOR RESIDUE MG A 503' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 1 MSE A 369 ? MSE A 388 . ? 1_555 ? 2 AC2 4 TYR A 114 ? TYR A 133 . ? 1_555 ? 3 AC2 4 ALA A 354 ? ALA A 373 . ? 1_555 ? 4 AC2 4 TYR A 361 ? TYR A 380 . ? 1_555 ? 5 AC2 4 HOH E . ? HOH A 675 . ? 1_555 ? 6 AC3 8 GLU A 239 ? GLU A 258 . ? 4_555 ? 7 AC3 8 GLU A 239 ? GLU A 258 . ? 1_555 ? 8 AC3 8 ASP A 270 ? ASP A 289 . ? 4_555 ? 9 AC3 8 ASP A 270 ? ASP A 289 . ? 1_555 ? 10 AC3 8 HOH E . ? HOH A 683 . ? 4_555 ? 11 AC3 8 HOH E . ? HOH A 683 . ? 1_555 ? 12 AC3 8 HOH E . ? HOH A 698 . ? 1_555 ? 13 AC3 8 HOH E . ? HOH A 698 . ? 4_555 ? # _atom_sites.entry_id 4L8N _atom_sites.fract_transf_matrix[1][1] 0.009607 _atom_sites.fract_transf_matrix[1][2] 0.005546 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011093 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010387 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 ALA 2 21 ? ? ? A . n A 1 3 GLN 3 22 ? ? ? A . n A 1 4 ASN 4 23 ? ? ? A . n A 1 5 ARG 5 24 ? ? ? A . n A 1 6 ASN 6 25 25 ASN ASN A . n A 1 7 THR 7 26 26 THR THR A . n A 1 8 SER 8 27 27 SER SER A . n A 1 9 ILE 9 28 28 ILE ILE A . n A 1 10 CYS 10 29 29 CYS CYS A . n A 1 11 ARG 11 30 30 ARG ARG A . n A 1 12 LEU 12 31 31 LEU LEU A . n A 1 13 GLY 13 32 32 GLY GLY A . n A 1 14 PHE 14 33 33 PHE PHE A . n A 1 15 THR 15 34 34 THR THR A . n A 1 16 TYR 16 35 35 TYR TYR A . n A 1 17 ASP 17 36 36 ASP ASP A . n A 1 18 ILE 18 37 37 ILE ILE A . n A 1 19 SER 19 38 38 SER SER A . n A 1 20 GLN 20 39 39 GLN GLN A . n A 1 21 SER 21 40 40 SER SER A . n A 1 22 LYS 22 41 41 LYS LYS A . n A 1 23 ASN 23 42 42 ASN ASN A . n A 1 24 TRP 24 43 43 TRP TRP A . n A 1 25 GLY 25 44 44 GLY GLY A . n A 1 26 ASN 26 45 45 ASN ASN A . n A 1 27 ASN 27 46 46 ASN ASN A . n A 1 28 LYS 28 47 47 LYS LYS A . n A 1 29 PRO 29 48 48 PRO PRO A . n A 1 30 VAL 30 49 49 VAL VAL A . n A 1 31 ILE 31 50 50 ILE ILE A . n A 1 32 LYS 32 51 51 LYS LYS A . n A 1 33 SER 33 52 52 SER SER A . n A 1 34 ILE 34 53 53 ILE ILE A . n A 1 35 ILE 35 54 54 ILE ILE A . n A 1 36 PRO 36 55 55 PRO PRO A . n A 1 37 TYR 37 56 56 TYR TYR A . n A 1 38 SER 38 57 57 SER SER A . n A 1 39 SER 39 58 58 SER SER A . n A 1 40 ALA 40 59 59 ALA ALA A . n A 1 41 GLU 41 60 60 GLU GLU A . n A 1 42 GLN 42 61 61 GLN GLN A . n A 1 43 ALA 43 62 62 ALA ALA A . n A 1 44 GLY 44 63 63 GLY GLY A . n A 1 45 ILE 45 64 64 ILE ILE A . n A 1 46 LYS 46 65 65 LYS LYS A . n A 1 47 LYS 47 66 66 LYS LYS A . n A 1 48 TYR 48 67 67 TYR TYR A . n A 1 49 ASP 49 68 68 ASP ASP A . n A 1 50 VAL 50 69 69 VAL VAL A . n A 1 51 ILE 51 70 70 ILE ILE A . n A 1 52 GLU 52 71 71 GLU GLU A . n A 1 53 GLU 53 72 72 GLU GLU A . n A 1 54 ILE 54 73 73 ILE ILE A . n A 1 55 ASN 55 74 74 ASN ASN A . n A 1 56 GLY 56 75 75 GLY GLY A . n A 1 57 VAL 57 76 76 VAL VAL A . n A 1 58 PRO 58 77 77 PRO PRO A . n A 1 59 VAL 59 78 78 VAL VAL A . n A 1 60 THR 60 79 79 THR THR A . n A 1 61 GLU 61 80 80 GLU GLU A . n A 1 62 VAL 62 81 81 VAL VAL A . n A 1 63 SER 63 82 82 SER SER A . n A 1 64 VAL 64 83 83 VAL VAL A . n A 1 65 ASP 65 84 84 ASP ASP A . n A 1 66 GLU 66 85 85 GLU GLU A . n A 1 67 ILE 67 86 86 ILE ILE A . n A 1 68 PRO 68 87 87 PRO PRO A . n A 1 69 GLN 69 88 88 GLN GLN A . n A 1 70 LEU 70 89 89 LEU LEU A . n A 1 71 LEU 71 90 90 LEU LEU A . n A 1 72 ASN 72 91 91 ASN ASN A . n A 1 73 PRO 73 92 92 PRO PRO A . n A 1 74 ALA 74 93 93 ALA ALA A . n A 1 75 GLY 75 94 94 GLY GLY A . n A 1 76 ARG 76 95 95 ARG ARG A . n A 1 77 ASN 77 96 96 ASN ASN A . n A 1 78 ASP 78 97 97 ASP ASP A . n A 1 79 VAL 79 98 98 VAL VAL A . n A 1 80 LEU 80 99 99 LEU LEU A . n A 1 81 LEU 81 100 100 LEU LEU A . n A 1 82 THR 82 101 101 THR THR A . n A 1 83 ILE 83 102 102 ILE ILE A . n A 1 84 SER 84 103 103 SER SER A . n A 1 85 ASN 85 104 104 ASN ASN A . n A 1 86 LEU 86 105 105 LEU LEU A . n A 1 87 SER 87 106 106 SER SER A . n A 1 88 SER 88 107 107 SER SER A . n A 1 89 PRO 89 108 108 PRO PRO A . n A 1 90 SER 90 109 109 SER SER A . n A 1 91 LYS 91 110 110 LYS LYS A . n A 1 92 GLN 92 111 111 GLN GLN A . n A 1 93 VAL 93 112 112 VAL VAL A . n A 1 94 LEU 94 113 113 LEU LEU A . n A 1 95 VAL 95 114 114 VAL VAL A . n A 1 96 LYS 96 115 115 LYS LYS A . n A 1 97 LYS 97 116 116 LYS LYS A . n A 1 98 ASP 98 117 117 ASP ASP A . n A 1 99 CYS 99 118 118 CYS CYS A . n A 1 100 LYS 100 119 119 LYS LYS A . n A 1 101 LYS 101 120 120 LYS LYS A . n A 1 102 SER 102 121 121 SER SER A . n A 1 103 ASN 103 122 122 ASN ASN A . n A 1 104 ALA 104 123 123 ALA ALA A . n A 1 105 ILE 105 124 124 ILE ILE A . n A 1 106 THR 106 125 125 THR THR A . n A 1 107 GLU 107 126 126 GLU GLU A . n A 1 108 ASP 108 127 127 ASP ASP A . n A 1 109 GLN 109 128 128 GLN GLN A . n A 1 110 LEU 110 129 129 LEU LEU A . n A 1 111 ALA 111 130 130 ALA ALA A . n A 1 112 SER 112 131 131 SER SER A . n A 1 113 ALA 113 132 132 ALA ALA A . n A 1 114 TYR 114 133 133 TYR TYR A . n A 1 115 ALA 115 134 134 ALA ALA A . n A 1 116 MSE 116 135 135 MSE MSE A . n A 1 117 TYR 117 136 136 TYR TYR A . n A 1 118 SER 118 137 137 SER SER A . n A 1 119 LEU 119 138 138 LEU LEU A . n A 1 120 GLU 120 139 139 GLU GLU A . n A 1 121 THR 121 140 140 THR THR A . n A 1 122 THR 122 141 141 THR THR A . n A 1 123 ASN 123 142 142 ASN ASN A . n A 1 124 GLU 124 143 143 GLU GLU A . n A 1 125 GLN 125 144 144 GLN GLN A . n A 1 126 GLU 126 145 145 GLU GLU A . n A 1 127 PHE 127 146 146 PHE PHE A . n A 1 128 VAL 128 147 147 VAL VAL A . n A 1 129 CYS 129 148 148 CYS CYS A . n A 1 130 PRO 130 149 149 PRO PRO A . n A 1 131 PHE 131 150 150 PHE PHE A . n A 1 132 LYS 132 151 151 LYS LYS A . n A 1 133 THR 133 152 152 THR THR A . n A 1 134 THR 134 153 153 THR THR A . n A 1 135 VAL 135 154 154 VAL VAL A . n A 1 136 THR 136 155 155 THR THR A . n A 1 137 SER 137 156 156 SER SER A . n A 1 138 ASP 138 157 157 ASP ASP A . n A 1 139 GLY 139 158 158 GLY GLY A . n A 1 140 VAL 140 159 159 VAL VAL A . n A 1 141 ASP 141 160 160 ASP ASP A . n A 1 142 PHE 142 161 161 PHE PHE A . n A 1 143 GLY 143 162 162 GLY GLY A . n A 1 144 ASN 144 163 163 ASN ASN A . n A 1 145 PHE 145 164 164 PHE PHE A . n A 1 146 LYS 146 165 165 LYS LYS A . n A 1 147 THR 147 166 166 THR THR A . n A 1 148 PHE 148 167 167 PHE PHE A . n A 1 149 ALA 149 168 168 ALA ALA A . n A 1 150 PHE 150 169 169 PHE PHE A . n A 1 151 SER 151 170 170 SER SER A . n A 1 152 THR 152 171 171 THR THR A . n A 1 153 ILE 153 172 172 ILE ILE A . n A 1 154 ASP 154 173 173 ASP ASP A . n A 1 155 GLU 155 174 174 GLU GLU A . n A 1 156 ASN 156 175 175 ASN ASN A . n A 1 157 ASN 157 176 176 ASN ASN A . n A 1 158 ARG 158 177 177 ARG ARG A . n A 1 159 LYS 159 178 178 LYS LYS A . n A 1 160 LEU 160 179 179 LEU LEU A . n A 1 161 GLU 161 180 180 GLU GLU A . n A 1 162 THR 162 181 181 THR THR A . n A 1 163 VAL 163 182 182 VAL VAL A . n A 1 164 ILE 164 183 183 ILE ILE A . n A 1 165 ASN 165 184 184 ASN ASN A . n A 1 166 GLU 166 185 185 GLU GLU A . n A 1 167 CYS 167 186 186 CYS CYS A . n A 1 168 ILE 168 187 187 ILE ILE A . n A 1 169 GLU 169 188 188 GLU GLU A . n A 1 170 ASN 170 189 189 ASN ASN A . n A 1 171 GLU 171 190 190 GLU GLU A . n A 1 172 LEU 172 191 191 LEU LEU A . n A 1 173 THR 173 192 192 THR THR A . n A 1 174 LYS 174 193 193 LYS LYS A . n A 1 175 LYS 175 194 194 LYS LYS A . n A 1 176 GLY 176 195 195 GLY GLY A . n A 1 177 LEU 177 196 196 LEU LEU A . n A 1 178 THR 178 197 197 THR THR A . n A 1 179 VAL 179 198 198 VAL VAL A . n A 1 180 ASP 180 199 199 ASP ASP A . n A 1 181 ILE 181 200 200 ILE ILE A . n A 1 182 ALA 182 201 201 ALA ALA A . n A 1 183 LYS 183 202 202 LYS LYS A . n A 1 184 PRO 184 203 203 PRO PRO A . n A 1 185 ASP 185 204 204 ASP ASP A . n A 1 186 LEU 186 205 205 LEU LEU A . n A 1 187 LEU 187 206 206 LEU LEU A . n A 1 188 ILE 188 207 207 ILE ILE A . n A 1 189 GLN 189 208 208 GLN GLN A . n A 1 190 THR 190 209 209 THR THR A . n A 1 191 PHE 191 210 210 PHE PHE A . n A 1 192 TYR 192 211 211 TYR TYR A . n A 1 193 PHE 193 212 212 PHE PHE A . n A 1 194 PHE 194 213 213 PHE PHE A . n A 1 195 ASP 195 214 214 ASP ASP A . n A 1 196 LYS 196 215 215 LYS LYS A . n A 1 197 ASN 197 216 216 ASN ASN A . n A 1 198 PRO 198 217 217 PRO PRO A . n A 1 199 ASN 199 218 218 ASN ASN A . n A 1 200 TYR 200 219 219 TYR TYR A . n A 1 201 LEU 201 220 220 LEU LEU A . n A 1 202 GLY 202 221 221 GLY GLY A . n A 1 203 ALA 203 222 222 ALA ALA A . n A 1 204 ASN 204 223 223 ASN ASN A . n A 1 205 LYS 205 224 ? ? ? A . n A 1 206 VAL 206 225 ? ? ? A . n A 1 207 LEU 207 226 ? ? ? A . n A 1 208 VAL 208 227 ? ? ? A . n A 1 209 GLU 209 228 228 GLU GLU A . n A 1 210 LYS 210 229 229 LYS LYS A . n A 1 211 GLU 211 230 230 GLU GLU A . n A 1 212 PRO 212 231 231 PRO PRO A . n A 1 213 THR 213 232 232 THR THR A . n A 1 214 TYR 214 233 233 TYR TYR A . n A 1 215 ARG 215 234 234 ARG ARG A . n A 1 216 TYR 216 235 235 TYR TYR A . n A 1 217 ASN 217 236 236 ASN ASN A . n A 1 218 PHE 218 237 237 PHE PHE A . n A 1 219 SER 219 238 238 SER SER A . n A 1 220 HIS 220 239 239 HIS HIS A . n A 1 221 SER 221 240 240 SER SER A . n A 1 222 LYS 222 241 241 LYS LYS A . n A 1 223 MSE 223 242 242 MSE MSE A . n A 1 224 GLU 224 243 243 GLU GLU A . n A 1 225 LYS 225 244 244 LYS LYS A . n A 1 226 PHE 226 245 245 PHE PHE A . n A 1 227 PRO 227 246 246 PRO PRO A . n A 1 228 PHE 228 247 247 PHE PHE A . n A 1 229 LEU 229 248 248 LEU LEU A . n A 1 230 ASN 230 249 249 ASN ASN A . n A 1 231 TYR 231 250 250 TYR TYR A . n A 1 232 ALA 232 251 251 ALA ALA A . n A 1 233 ALA 233 252 252 ALA ALA A . n A 1 234 ALA 234 253 253 ALA ALA A . n A 1 235 GLU 235 254 254 GLU GLU A . n A 1 236 ALA 236 255 255 ALA ALA A . n A 1 237 GLU 237 256 256 GLU GLU A . n A 1 238 ALA 238 257 257 ALA ALA A . n A 1 239 GLU 239 258 258 GLU GLU A . n A 1 240 TYR 240 259 259 TYR TYR A . n A 1 241 LEU 241 260 260 LEU LEU A . n A 1 242 LEU 242 261 261 LEU LEU A . n A 1 243 GLN 243 262 262 GLN GLN A . n A 1 244 PHE 244 263 263 PHE PHE A . n A 1 245 GLY 245 264 264 GLY GLY A . n A 1 246 ILE 246 265 265 ILE ILE A . n A 1 247 ARG 247 266 266 ARG ARG A . n A 1 248 ILE 248 267 267 ILE ILE A . n A 1 249 ILE 249 268 268 ILE ILE A . n A 1 250 ASP 250 269 269 ASP ASP A . n A 1 251 GLN 251 270 270 GLN GLN A . n A 1 252 LYS 252 271 271 LYS LYS A . n A 1 253 ASP 253 272 272 ASP ASP A . n A 1 254 ILE 254 273 273 ILE ILE A . n A 1 255 PRO 255 274 274 PRO PRO A . n A 1 256 GLY 256 275 275 GLY GLY A . n A 1 257 ARG 257 276 276 ARG ARG A . n A 1 258 VAL 258 277 277 VAL VAL A . n A 1 259 LEU 259 278 278 LEU LEU A . n A 1 260 TRP 260 279 279 TRP TRP A . n A 1 261 GLU 261 280 280 GLU GLU A . n A 1 262 CYS 262 281 281 CYS CYS A . n A 1 263 GLU 263 282 282 GLU GLU A . n A 1 264 ALA 264 283 283 ALA ALA A . n A 1 265 ASN 265 284 284 ASN ASN A . n A 1 266 GLU 266 285 285 GLU GLU A . n A 1 267 LEU 267 286 286 LEU LEU A . n A 1 268 LEU 268 287 287 LEU LEU A . n A 1 269 GLU 269 288 288 GLU GLU A . n A 1 270 ASP 270 289 289 ASP ASP A . n A 1 271 SER 271 290 290 SER SER A . n A 1 272 TYR 272 291 291 TYR TYR A . n A 1 273 ARG 273 292 292 ARG ARG A . n A 1 274 LEU 274 293 293 LEU LEU A . n A 1 275 ASP 275 294 294 ASP ASP A . n A 1 276 GLU 276 295 295 GLU GLU A . n A 1 277 TYR 277 296 296 TYR TYR A . n A 1 278 ALA 278 297 297 ALA ALA A . n A 1 279 ARG 279 298 298 ARG ARG A . n A 1 280 VAL 280 299 299 VAL VAL A . n A 1 281 HIS 281 300 300 HIS HIS A . n A 1 282 VAL 282 301 301 VAL VAL A . n A 1 283 PRO 283 302 302 PRO PRO A . n A 1 284 LEU 284 303 303 LEU LEU A . n A 1 285 MSE 285 304 304 MSE MSE A . n A 1 286 CYS 286 305 305 CYS CYS A . n A 1 287 MSE 287 306 306 MSE MSE A . n A 1 288 GLN 288 307 307 GLN GLN A . n A 1 289 TYR 289 308 308 TYR TYR A . n A 1 290 PRO 290 309 309 PRO PRO A . n A 1 291 TYR 291 310 310 TYR TYR A . n A 1 292 THR 292 311 311 THR THR A . n A 1 293 LYS 293 312 312 LYS LYS A . n A 1 294 TYR 294 313 313 TYR TYR A . n A 1 295 GLY 295 314 314 GLY GLY A . n A 1 296 ARG 296 315 315 ARG ARG A . n A 1 297 ASN 297 316 316 ASN ASN A . n A 1 298 VAL 298 317 317 VAL VAL A . n A 1 299 PRO 299 318 318 PRO PRO A . n A 1 300 PHE 300 319 319 PHE PHE A . n A 1 301 LYS 301 320 320 LYS LYS A . n A 1 302 VAL 302 321 321 VAL VAL A . n A 1 303 SER 303 322 322 SER SER A . n A 1 304 LYS 304 323 323 LYS LYS A . n A 1 305 LYS 305 324 324 LYS LYS A . n A 1 306 THR 306 325 325 THR THR A . n A 1 307 TYR 307 326 326 TYR TYR A . n A 1 308 ASN 308 327 327 ASN ASN A . n A 1 309 TYR 309 328 328 TYR TYR A . n A 1 310 THR 310 329 329 THR THR A . n A 1 311 GLY 311 330 330 GLY GLY A . n A 1 312 ILE 312 331 331 ILE ILE A . n A 1 313 SER 313 332 332 SER SER A . n A 1 314 TYR 314 333 333 TYR TYR A . n A 1 315 ASP 315 334 334 ASP ASP A . n A 1 316 ILE 316 335 335 ILE ILE A . n A 1 317 ASP 317 336 336 ASP ASP A . n A 1 318 LYS 318 337 337 LYS LYS A . n A 1 319 LEU 319 338 338 LEU LEU A . n A 1 320 ASP 320 339 339 ASP ASP A . n A 1 321 GLN 321 340 340 GLN GLN A . n A 1 322 VAL 322 341 341 VAL VAL A . n A 1 323 VAL 323 342 342 VAL VAL A . n A 1 324 ASP 324 343 343 ASP ASP A . n A 1 325 VAL 325 344 344 VAL VAL A . n A 1 326 ASP 326 345 345 ASP ASP A . n A 1 327 ARG 327 346 346 ARG ARG A . n A 1 328 ASN 328 347 347 ASN ASN A . n A 1 329 SER 329 348 348 SER SER A . n A 1 330 PRO 330 349 349 PRO PRO A . n A 1 331 ALA 331 350 350 ALA ALA A . n A 1 332 TYR 332 351 351 TYR TYR A . n A 1 333 ALA 333 352 352 ALA ALA A . n A 1 334 ALA 334 353 353 ALA ALA A . n A 1 335 GLY 335 354 354 GLY GLY A . n A 1 336 ILE 336 355 355 ILE ILE A . n A 1 337 ARG 337 356 356 ARG ARG A . n A 1 338 PRO 338 357 357 PRO PRO A . n A 1 339 ARG 339 358 358 ARG ARG A . n A 1 340 ASP 340 359 359 ASP ASP A . n A 1 341 ILE 341 360 360 ILE ILE A . n A 1 342 ILE 342 361 361 ILE ILE A . n A 1 343 GLU 343 362 362 GLU GLU A . n A 1 344 LYS 344 363 363 LYS LYS A . n A 1 345 ILE 345 364 364 ILE ILE A . n A 1 346 GLY 346 365 365 GLY GLY A . n A 1 347 ARG 347 366 366 ARG ARG A . n A 1 348 HIS 348 367 367 HIS HIS A . n A 1 349 LYS 349 368 368 LYS LYS A . n A 1 350 MSE 350 369 369 MSE MSE A . n A 1 351 ASP 351 370 370 ASP ASP A . n A 1 352 HIS 352 371 371 HIS HIS A . n A 1 353 SER 353 372 372 SER SER A . n A 1 354 ALA 354 373 373 ALA ALA A . n A 1 355 GLU 355 374 374 GLU GLU A . n A 1 356 GLU 356 375 375 GLU GLU A . n A 1 357 PHE 357 376 376 PHE PHE A . n A 1 358 SER 358 377 377 SER SER A . n A 1 359 SER 359 378 378 SER SER A . n A 1 360 ALA 360 379 379 ALA ALA A . n A 1 361 TYR 361 380 380 TYR TYR A . n A 1 362 LYS 362 381 381 LYS LYS A . n A 1 363 ARG 363 382 382 ARG ARG A . n A 1 364 PHE 364 383 383 PHE PHE A . n A 1 365 ILE 365 384 384 ILE ILE A . n A 1 366 THR 366 385 385 THR THR A . n A 1 367 ASN 367 386 386 ASN ASN A . n A 1 368 THR 368 387 387 THR THR A . n A 1 369 MSE 369 388 388 MSE MSE A . n A 1 370 GLN 370 389 389 GLN GLN A . n A 1 371 TYR 371 390 390 TYR TYR A . n A 1 372 ARG 372 391 391 ARG ARG A . n A 1 373 ASP 373 392 392 ASP ASP A . n A 1 374 PRO 374 393 393 PRO PRO A . n A 1 375 LYS 375 394 394 LYS LYS A . n A 1 376 THR 376 395 395 THR THR A . n A 1 377 MSE 377 396 396 MSE MSE A . n A 1 378 PHE 378 397 397 PHE PHE A . n A 1 379 THR 379 398 398 THR THR A . n A 1 380 ASP 380 399 399 ASP ASP A . n A 1 381 ALA 381 400 400 ALA ALA A . n A 1 382 ASN 382 401 401 ASN ASN A . n A 1 383 GLY 383 402 402 GLY GLY A . n A 1 384 PHE 384 403 403 PHE PHE A . n A 1 385 LYS 385 404 404 LYS LYS A . n A 1 386 TYR 386 405 405 TYR TYR A . n A 1 387 CYS 387 406 406 CYS CYS A . n A 1 388 MSE 388 407 407 MSE MSE A . n A 1 389 PHE 389 408 408 PHE PHE A . n A 1 390 TRP 390 409 409 TRP TRP A . n A 1 391 ASP 391 410 410 ASP ASP A . n A 1 392 VAL 392 411 411 VAL VAL A . n A 1 393 PHE 393 412 412 PHE PHE A . n A 1 394 LYS 394 413 413 LYS LYS A . n A 1 395 TYR 395 414 414 TYR TYR A . n A 1 396 PRO 396 415 415 PRO PRO A . n A 1 397 GLN 397 416 416 GLN GLN A . n A 1 398 ILE 398 417 417 ILE ILE A . n A 1 399 ALA 399 418 418 ALA ALA A . n A 1 400 ASP 400 419 419 ASP ASP A . n A 1 401 ALA 401 420 420 ALA ALA A . n A 1 402 SER 402 421 421 SER SER A . n A 1 403 GLN 403 422 422 GLN GLN A . n A 1 404 SER 404 423 423 SER SER A . n A 1 405 SER 405 424 424 SER SER A . n A 1 406 ASP 406 425 425 ASP ASP A . n A 1 407 TYR 407 426 426 TYR TYR A . n A 1 408 LEU 408 427 427 LEU LEU A . n A 1 409 PRO 409 428 428 PRO PRO A . n A 1 410 ALA 410 429 429 ALA ALA A . n A 1 411 PHE 411 430 430 PHE PHE A . n A 1 412 SER 412 431 431 SER SER A . n A 1 413 TYR 413 432 432 TYR TYR A . n A 1 414 LEU 414 433 433 LEU LEU A . n A 1 415 TYR 415 434 434 TYR TYR A . n A 1 416 TYR 416 435 435 TYR TYR A . n A 1 417 PHE 417 436 436 PHE PHE A . n A 1 418 ALA 418 437 437 ALA ALA A . n A 1 419 PRO 419 438 438 PRO PRO A . n A 1 420 TYR 420 439 439 TYR TYR A . n A 1 421 ILE 421 440 440 ILE ILE A . n A 1 422 ASN 422 441 441 ASN ASN A . n A 1 423 PRO 423 442 442 PRO PRO A . n A 1 424 SER 424 443 443 SER SER A . n A 1 425 GLY 425 444 444 GLY GLY A . n A 1 426 ASN 426 445 445 ASN ASN A . n A 1 427 ASN 427 446 446 ASN ASN A . n A 1 428 ALA 428 447 447 ALA ALA A . n A 1 429 CYS 429 448 448 CYS CYS A . n A 1 430 THR 430 449 449 THR THR A . n A 1 431 PHE 431 450 450 PHE PHE A . n A 1 432 ASN 432 451 451 ASN ASN A . n A 1 433 ILE 433 452 452 ILE ILE A . n A 1 434 LYS 434 453 453 LYS LYS A . n A 1 435 ARG 435 454 454 ARG ARG A . n A 1 436 GLY 436 455 455 GLY GLY A . n A 1 437 LYS 437 456 456 LYS LYS A . n A 1 438 THR 438 457 457 THR THR A . n A 1 439 LYS 439 458 458 LYS LYS A . n A 1 440 LEU 440 459 459 LEU LEU A . n A 1 441 GLU 441 460 460 GLU GLU A . n A 1 442 VAL 442 461 461 VAL VAL A . n A 1 443 ILE 443 462 462 ILE ILE A . n A 1 444 ILE 444 463 463 ILE ILE A . n A 1 445 ARG 445 464 464 ARG ARG A . n A 1 446 PRO 446 465 465 PRO PRO A . n A 1 447 THR 447 466 466 THR THR A . n A 1 448 ILE 448 467 467 ILE ILE A . n A 1 449 ARG 449 468 468 ARG ARG A . n A 1 450 SER 450 469 469 SER SER A . n A 1 451 GLU 451 470 470 GLU GLU A . n A 1 452 VAL 452 471 471 VAL VAL A . n A 1 453 THR 453 472 472 THR THR A . n A 1 454 VAL 454 473 473 VAL VAL A . n A 1 455 GLU 455 474 474 GLU GLU A . n A 1 456 ILE 456 475 475 ILE ILE A . n A 1 457 LYS 457 476 476 LYS LYS A . n # _pdbx_SG_project.project_name PSI:Biology _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EOH 1 501 501 EOH EOH A . C 3 MPD 1 502 502 MPD MPD A . D 4 MG 1 503 503 MG MG A . E 5 HOH 1 601 504 HOH HOH A . E 5 HOH 2 602 505 HOH HOH A . E 5 HOH 3 603 506 HOH HOH A . E 5 HOH 4 604 507 HOH HOH A . E 5 HOH 5 605 508 HOH HOH A . E 5 HOH 6 606 509 HOH HOH A . E 5 HOH 7 607 510 HOH HOH A . E 5 HOH 8 608 511 HOH HOH A . E 5 HOH 9 609 512 HOH HOH A . E 5 HOH 10 610 513 HOH HOH A . E 5 HOH 11 611 514 HOH HOH A . E 5 HOH 12 612 515 HOH HOH A . E 5 HOH 13 613 516 HOH HOH A . E 5 HOH 14 614 517 HOH HOH A . E 5 HOH 15 615 518 HOH HOH A . E 5 HOH 16 616 519 HOH HOH A . E 5 HOH 17 617 520 HOH HOH A . E 5 HOH 18 618 521 HOH HOH A . E 5 HOH 19 619 522 HOH HOH A . E 5 HOH 20 620 523 HOH HOH A . E 5 HOH 21 621 524 HOH HOH A . E 5 HOH 22 622 525 HOH HOH A . E 5 HOH 23 623 526 HOH HOH A . E 5 HOH 24 624 527 HOH HOH A . E 5 HOH 25 625 528 HOH HOH A . E 5 HOH 26 626 529 HOH HOH A . E 5 HOH 27 627 530 HOH HOH A . E 5 HOH 28 628 531 HOH HOH A . E 5 HOH 29 629 532 HOH HOH A . E 5 HOH 30 630 533 HOH HOH A . E 5 HOH 31 631 534 HOH HOH A . E 5 HOH 32 632 535 HOH HOH A . E 5 HOH 33 633 536 HOH HOH A . E 5 HOH 34 634 537 HOH HOH A . E 5 HOH 35 635 538 HOH HOH A . E 5 HOH 36 636 539 HOH HOH A . E 5 HOH 37 637 540 HOH HOH A . E 5 HOH 38 638 541 HOH HOH A . E 5 HOH 39 639 542 HOH HOH A . E 5 HOH 40 640 543 HOH HOH A . E 5 HOH 41 641 544 HOH HOH A . E 5 HOH 42 642 545 HOH HOH A . E 5 HOH 43 643 546 HOH HOH A . E 5 HOH 44 644 547 HOH HOH A . E 5 HOH 45 645 548 HOH HOH A . E 5 HOH 46 646 549 HOH HOH A . E 5 HOH 47 647 550 HOH HOH A . E 5 HOH 48 648 551 HOH HOH A . E 5 HOH 49 649 552 HOH HOH A . E 5 HOH 50 650 553 HOH HOH A . E 5 HOH 51 651 554 HOH HOH A . E 5 HOH 52 652 555 HOH HOH A . E 5 HOH 53 653 556 HOH HOH A . E 5 HOH 54 654 557 HOH HOH A . E 5 HOH 55 655 558 HOH HOH A . E 5 HOH 56 656 559 HOH HOH A . E 5 HOH 57 657 560 HOH HOH A . E 5 HOH 58 658 561 HOH HOH A . E 5 HOH 59 659 562 HOH HOH A . E 5 HOH 60 660 563 HOH HOH A . E 5 HOH 61 661 564 HOH HOH A . E 5 HOH 62 662 565 HOH HOH A . E 5 HOH 63 663 566 HOH HOH A . E 5 HOH 64 664 567 HOH HOH A . E 5 HOH 65 665 568 HOH HOH A . E 5 HOH 66 666 569 HOH HOH A . E 5 HOH 67 667 570 HOH HOH A . E 5 HOH 68 668 571 HOH HOH A . E 5 HOH 69 669 572 HOH HOH A . E 5 HOH 70 670 573 HOH HOH A . E 5 HOH 71 671 574 HOH HOH A . E 5 HOH 72 672 575 HOH HOH A . E 5 HOH 73 673 576 HOH HOH A . E 5 HOH 74 674 577 HOH HOH A . E 5 HOH 75 675 578 HOH HOH A . E 5 HOH 76 676 579 HOH HOH A . E 5 HOH 77 677 580 HOH HOH A . E 5 HOH 78 678 581 HOH HOH A . E 5 HOH 79 679 582 HOH HOH A . E 5 HOH 80 680 583 HOH HOH A . E 5 HOH 81 681 584 HOH HOH A . E 5 HOH 82 682 585 HOH HOH A . E 5 HOH 83 683 586 HOH HOH A . E 5 HOH 84 684 587 HOH HOH A . E 5 HOH 85 685 588 HOH HOH A . E 5 HOH 86 686 589 HOH HOH A . E 5 HOH 87 687 590 HOH HOH A . E 5 HOH 88 688 591 HOH HOH A . E 5 HOH 89 689 592 HOH HOH A . E 5 HOH 90 690 593 HOH HOH A . E 5 HOH 91 691 594 HOH HOH A . E 5 HOH 92 692 595 HOH HOH A . E 5 HOH 93 693 596 HOH HOH A . E 5 HOH 94 694 597 HOH HOH A . E 5 HOH 95 695 598 HOH HOH A . E 5 HOH 96 696 599 HOH HOH A . E 5 HOH 97 697 600 HOH HOH A . E 5 HOH 98 698 601 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 116 A MSE 135 ? MET SELENOMETHIONINE 2 A MSE 223 A MSE 242 ? MET SELENOMETHIONINE 3 A MSE 285 A MSE 304 ? MET SELENOMETHIONINE 4 A MSE 287 A MSE 306 ? MET SELENOMETHIONINE 5 A MSE 350 A MSE 369 ? MET SELENOMETHIONINE 6 A MSE 369 A MSE 388 ? MET SELENOMETHIONINE 7 A MSE 377 A MSE 396 ? MET SELENOMETHIONINE 8 A MSE 388 A MSE 407 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5330 ? 1 MORE -50 ? 1 'SSA (A^2)' 41770 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 6_555 -x,-x+y,-z+1/3 -0.5000000000 -0.8660254038 0.0000000000 0.0000000000 -0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 32.0923333333 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A MG 503 ? D MG . 2 1 A HOH 683 ? E HOH . 3 1 A HOH 696 ? E HOH . 4 1 A HOH 697 ? E HOH . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OE2 ? A GLU 239 ? A GLU 258 ? 1_555 MG ? D MG . ? A MG 503 ? 1_555 OE1 ? A GLU 239 ? A GLU 258 ? 1_555 49.8 ? 2 OE2 ? A GLU 239 ? A GLU 258 ? 1_555 MG ? D MG . ? A MG 503 ? 1_555 O ? E HOH . ? A HOH 683 ? 1_555 76.9 ? 3 OE1 ? A GLU 239 ? A GLU 258 ? 1_555 MG ? D MG . ? A MG 503 ? 1_555 O ? E HOH . ? A HOH 683 ? 1_555 125.0 ? 4 OE2 ? A GLU 239 ? A GLU 258 ? 1_555 MG ? D MG . ? A MG 503 ? 1_555 O ? E HOH . ? A HOH 698 ? 1_555 81.5 ? 5 OE1 ? A GLU 239 ? A GLU 258 ? 1_555 MG ? D MG . ? A MG 503 ? 1_555 O ? E HOH . ? A HOH 698 ? 1_555 77.3 ? 6 O ? E HOH . ? A HOH 683 ? 1_555 MG ? D MG . ? A MG 503 ? 1_555 O ? E HOH . ? A HOH 698 ? 1_555 111.1 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-06-26 2 'Structure model' 1 1 2017-11-15 3 'Structure model' 1 2 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Refinement description' 2 3 'Structure model' 'Database references' 3 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' software 2 3 'Structure model' database_2 3 3 'Structure model' pdbx_struct_conn_angle 4 3 'Structure model' struct_conn 5 3 'Structure model' struct_ref_seq_dif 6 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 10 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 11 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 12 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 13 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 14 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 15 3 'Structure model' '_pdbx_struct_conn_angle.value' 16 3 'Structure model' '_struct_conn.pdbx_dist_value' 17 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 18 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 19 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 20 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 21 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 22 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 23 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 24 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 25 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 26 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 27 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 28 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 29 3 'Structure model' '_struct_ref_seq_dif.details' 30 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 31 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 32 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -26.7405 _pdbx_refine_tls.origin_y 5.6661 _pdbx_refine_tls.origin_z 1.1630 _pdbx_refine_tls.T[1][1] -0.1889 _pdbx_refine_tls.T[2][2] -0.0621 _pdbx_refine_tls.T[3][3] -0.0852 _pdbx_refine_tls.T[1][2] 0.0464 _pdbx_refine_tls.T[1][3] -0.0159 _pdbx_refine_tls.T[2][3] -0.0993 _pdbx_refine_tls.L[1][1] 0.5730 _pdbx_refine_tls.L[2][2] 1.8085 _pdbx_refine_tls.L[3][3] 1.9204 _pdbx_refine_tls.L[1][2] 0.4920 _pdbx_refine_tls.L[1][3] 0.4299 _pdbx_refine_tls.L[2][3] 1.4375 _pdbx_refine_tls.S[1][1] 0.0489 _pdbx_refine_tls.S[2][2] -0.1942 _pdbx_refine_tls.S[3][3] 0.1453 _pdbx_refine_tls.S[1][2] -0.0377 _pdbx_refine_tls.S[1][3] -0.0802 _pdbx_refine_tls.S[2][3] 0.1008 _pdbx_refine_tls.S[2][1] 0.2318 _pdbx_refine_tls.S[3][1] 0.1711 _pdbx_refine_tls.S[3][2] -0.2253 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 25 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 476 _pdbx_refine_tls_group.selection_details '{A|25 - 476}' _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? # _phasing.method MAD # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 2 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 SHELX . ? package 'George M. Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 4 SHARP . ? package 'Eric de La Fortelle' sharp-develop@globalphasing.com phasing http://www.globalphasing.com/sharp/ ? ? 5 XSCALE 'July 4, 2012' ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 6 BUSTER-TNT 2.10.0 ? program 'Gerard Bricogne' buster-develop@GlobalPhasing.com refinement http://www.globalphasing.com/buster/ ? ? 7 XDS . ? ? ? ? 'data reduction' ? ? ? 8 SHELXD . ? ? ? ? phasing ? ? ? 9 BUSTER 2.10.0 ? ? ? ? refinement ? ? ? # _pdbx_entry_details.entry_id 4L8N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE CONSTRUCT (21-476) WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 171 ? ? -39.55 130.55 2 1 PRO A 246 ? ? -78.45 43.60 3 1 ASP A 336 ? ? -96.44 -71.00 4 1 ASN A 347 ? ? -118.36 57.67 5 1 LEU A 427 ? ? 40.26 73.30 6 1 ILE A 440 ? ? -123.18 -54.29 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASN 25 ? CG ? A ASN 6 CG 2 1 Y 1 A ASN 25 ? OD1 ? A ASN 6 OD1 3 1 Y 1 A ASN 25 ? ND2 ? A ASN 6 ND2 4 1 Y 1 A LYS 215 ? CG ? A LYS 196 CG 5 1 Y 1 A LYS 215 ? CD ? A LYS 196 CD 6 1 Y 1 A LYS 215 ? CE ? A LYS 196 CE 7 1 Y 1 A LYS 215 ? NZ ? A LYS 196 NZ 8 1 Y 1 A ASN 218 ? CG ? A ASN 199 CG 9 1 Y 1 A ASN 218 ? OD1 ? A ASN 199 OD1 10 1 Y 1 A ASN 218 ? ND2 ? A ASN 199 ND2 11 1 Y 1 A ASN 223 ? CG ? A ASN 204 CG 12 1 Y 1 A ASN 223 ? OD1 ? A ASN 204 OD1 13 1 Y 1 A ASN 223 ? ND2 ? A ASN 204 ND2 14 1 Y 1 A GLU 228 ? CG ? A GLU 209 CG 15 1 Y 1 A GLU 228 ? CD ? A GLU 209 CD 16 1 Y 1 A GLU 228 ? OE1 ? A GLU 209 OE1 17 1 Y 1 A GLU 228 ? OE2 ? A GLU 209 OE2 18 1 Y 1 A LYS 229 ? CG ? A LYS 210 CG 19 1 Y 1 A LYS 229 ? CD ? A LYS 210 CD 20 1 Y 1 A LYS 229 ? CE ? A LYS 210 CE 21 1 Y 1 A LYS 229 ? NZ ? A LYS 210 NZ 22 1 Y 1 A GLU 230 ? CG ? A GLU 211 CG 23 1 Y 1 A GLU 230 ? CD ? A GLU 211 CD 24 1 Y 1 A GLU 230 ? OE1 ? A GLU 211 OE1 25 1 Y 1 A GLU 230 ? OE2 ? A GLU 211 OE2 26 1 Y 1 A TYR 250 ? CG ? A TYR 231 CG 27 1 Y 1 A TYR 250 ? CD1 ? A TYR 231 CD1 28 1 Y 1 A TYR 250 ? CD2 ? A TYR 231 CD2 29 1 Y 1 A TYR 250 ? CE1 ? A TYR 231 CE1 30 1 Y 1 A TYR 250 ? CE2 ? A TYR 231 CE2 31 1 Y 1 A TYR 250 ? CZ ? A TYR 231 CZ 32 1 Y 1 A TYR 250 ? OH ? A TYR 231 OH 33 1 Y 1 A ARG 346 ? CG ? A ARG 327 CG 34 1 Y 1 A ARG 346 ? CD ? A ARG 327 CD 35 1 Y 1 A ARG 346 ? NE ? A ARG 327 NE 36 1 Y 1 A ARG 346 ? CZ ? A ARG 327 CZ 37 1 Y 1 A ARG 346 ? NH1 ? A ARG 327 NH1 38 1 Y 1 A ARG 346 ? NH2 ? A ARG 327 NH2 39 1 Y 1 A ARG 358 ? CG ? A ARG 339 CG 40 1 Y 1 A ARG 358 ? CD ? A ARG 339 CD 41 1 Y 1 A ARG 358 ? NE ? A ARG 339 NE 42 1 Y 1 A ARG 358 ? CZ ? A ARG 339 CZ 43 1 Y 1 A ARG 358 ? NH1 ? A ARG 339 NH1 44 1 Y 1 A ARG 358 ? NH2 ? A ARG 339 NH2 45 1 Y 1 A LYS 453 ? CG ? A LYS 434 CG 46 1 Y 1 A LYS 453 ? CD ? A LYS 434 CD 47 1 Y 1 A LYS 453 ? CE ? A LYS 434 CE 48 1 Y 1 A LYS 453 ? NZ ? A LYS 434 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A ALA 21 ? A ALA 2 3 1 Y 1 A GLN 22 ? A GLN 3 4 1 Y 1 A ASN 23 ? A ASN 4 5 1 Y 1 A ARG 24 ? A ARG 5 6 1 Y 1 A LYS 224 ? A LYS 205 7 1 Y 1 A VAL 225 ? A VAL 206 8 1 Y 1 A LEU 226 ? A LEU 207 9 1 Y 1 A VAL 227 ? A VAL 208 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 ETHANOL EOH 3 '(4S)-2-METHYL-2,4-PENTANEDIOL' MPD 4 'MAGNESIUM ION' MG 5 water HOH #