data_4LAQ # _entry.id 4LAQ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.320 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4LAQ RCSB RCSB080394 WWPDB D_1000080394 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3GKZ 'Single chain variable fragment' unspecified PDB 4LAR . unspecified PDB 4LAS . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4LAQ _pdbx_database_status.recvd_initial_deposition_date 2013-06-20 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Celikel, R.' 1 'Gokulan, K.' 2 'Peterson, E.C.' 3 'Varughese, K.I.' 4 # _citation.id primary _citation.title ;Structural characterization of a therapeutic anti-methamphetamine antibody fragment: oligomerization and binding of active metabolites. ; _citation.journal_abbrev 'Plos One' _citation.journal_volume 8 _citation.page_first e82690 _citation.page_last e82690 _citation.year 2013 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1932-6203 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24349338 _citation.pdbx_database_id_DOI 10.1371/journal.pone.0082690 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Peterson, E.C.' 1 ? primary 'Celikel, R.' 2 ? primary 'Gokulan, K.' 3 ? primary 'Varughese, K.I.' 4 ? # _cell.entry_id 4LAQ _cell.length_a 88.340 _cell.length_b 88.340 _cell.length_c 88.340 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4LAQ _symmetry.space_group_name_H-M 'P 21 3' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 198 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Single chain antibody fragment scFv6H4' 26792.344 1 ? ? ? ? 2 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 3 non-polymer syn D-MALATE 134.087 1 ? ? ? ? 4 non-polymer syn 'NICKEL (II) ION' 58.693 1 ? ? ? ? 5 water nat water 18.015 7 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;EVQLQESGPSLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYL QLKSVSSEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIMSASPGEKVTLTCSASSS VSSSHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAASYFCHQWSSFPFTFGSGTKLEIK RAPHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;EVQLQESGPSLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYL QLKSVSSEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIMSASPGEKVTLTCSASSS VSSSHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAASYFCHQWSSFPFTFGSGTKLEIK RAPHHHHHH ; _entity_poly.pdbx_strand_id H _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLU n 1 2 VAL n 1 3 GLN n 1 4 LEU n 1 5 GLN n 1 6 GLU n 1 7 SER n 1 8 GLY n 1 9 PRO n 1 10 SER n 1 11 LEU n 1 12 VAL n 1 13 LYS n 1 14 PRO n 1 15 SER n 1 16 GLN n 1 17 THR n 1 18 LEU n 1 19 SER n 1 20 LEU n 1 21 THR n 1 22 CYS n 1 23 SER n 1 24 VAL n 1 25 THR n 1 26 GLY n 1 27 ASP n 1 28 SER n 1 29 VAL n 1 30 THR n 1 31 SER n 1 32 GLY n 1 33 TYR n 1 34 TRP n 1 35 SER n 1 36 TRP n 1 37 ILE n 1 38 ARG n 1 39 GLN n 1 40 PHE n 1 41 PRO n 1 42 GLY n 1 43 ASN n 1 44 LYS n 1 45 LEU n 1 46 ASP n 1 47 TYR n 1 48 MET n 1 49 GLY n 1 50 TYR n 1 51 ILE n 1 52 SER n 1 53 TYR n 1 54 ARG n 1 55 GLY n 1 56 SER n 1 57 THR n 1 58 TYR n 1 59 TYR n 1 60 ASN n 1 61 PRO n 1 62 SER n 1 63 LEU n 1 64 LYS n 1 65 SER n 1 66 ARG n 1 67 ILE n 1 68 SER n 1 69 ILE n 1 70 THR n 1 71 ARG n 1 72 ASP n 1 73 THR n 1 74 SER n 1 75 LYS n 1 76 ASN n 1 77 GLN n 1 78 VAL n 1 79 TYR n 1 80 LEU n 1 81 GLN n 1 82 LEU n 1 83 LYS n 1 84 SER n 1 85 VAL n 1 86 SER n 1 87 SER n 1 88 GLU n 1 89 ASP n 1 90 THR n 1 91 ALA n 1 92 THR n 1 93 TYR n 1 94 TYR n 1 95 CYS n 1 96 SER n 1 97 TYR n 1 98 PHE n 1 99 ASP n 1 100 SER n 1 101 ASP n 1 102 ASP n 1 103 TYR n 1 104 ALA n 1 105 MET n 1 106 GLU n 1 107 TYR n 1 108 TRP n 1 109 GLY n 1 110 GLN n 1 111 GLY n 1 112 THR n 1 113 SER n 1 114 VAL n 1 115 THR n 1 116 VAL n 1 117 SER n 1 118 GLY n 1 119 GLY n 1 120 GLY n 1 121 GLY n 1 122 SER n 1 123 GLY n 1 124 GLY n 1 125 GLY n 1 126 GLY n 1 127 SER n 1 128 GLY n 1 129 GLY n 1 130 GLY n 1 131 GLY n 1 132 SER n 1 133 GLN n 1 134 ILE n 1 135 VAL n 1 136 LEU n 1 137 THR n 1 138 GLN n 1 139 SER n 1 140 PRO n 1 141 ALA n 1 142 ILE n 1 143 MET n 1 144 SER n 1 145 ALA n 1 146 SER n 1 147 PRO n 1 148 GLY n 1 149 GLU n 1 150 LYS n 1 151 VAL n 1 152 THR n 1 153 LEU n 1 154 THR n 1 155 CYS n 1 156 SER n 1 157 ALA n 1 158 SER n 1 159 SER n 1 160 SER n 1 161 VAL n 1 162 SER n 1 163 SER n 1 164 SER n 1 165 HIS n 1 166 LEU n 1 167 TYR n 1 168 TRP n 1 169 TYR n 1 170 GLN n 1 171 GLN n 1 172 LYS n 1 173 PRO n 1 174 GLY n 1 175 SER n 1 176 SER n 1 177 PRO n 1 178 LYS n 1 179 LEU n 1 180 TRP n 1 181 ILE n 1 182 TYR n 1 183 SER n 1 184 THR n 1 185 SER n 1 186 ASN n 1 187 LEU n 1 188 ALA n 1 189 SER n 1 190 GLY n 1 191 VAL n 1 192 PRO n 1 193 ALA n 1 194 ARG n 1 195 PHE n 1 196 SER n 1 197 GLY n 1 198 SER n 1 199 GLY n 1 200 SER n 1 201 GLY n 1 202 THR n 1 203 SER n 1 204 TYR n 1 205 SER n 1 206 LEU n 1 207 THR n 1 208 ILE n 1 209 SER n 1 210 SER n 1 211 MET n 1 212 GLU n 1 213 ALA n 1 214 GLU n 1 215 ASP n 1 216 ALA n 1 217 ALA n 1 218 SER n 1 219 TYR n 1 220 PHE n 1 221 CYS n 1 222 HIS n 1 223 GLN n 1 224 TRP n 1 225 SER n 1 226 SER n 1 227 PHE n 1 228 PRO n 1 229 PHE n 1 230 THR n 1 231 PHE n 1 232 GLY n 1 233 SER n 1 234 GLY n 1 235 THR n 1 236 LYS n 1 237 LEU n 1 238 GLU n 1 239 ILE n 1 240 LYS n 1 241 ARG n 1 242 ALA n 1 243 PRO n 1 244 HIS n 1 245 HIS n 1 246 HIS n 1 247 HIS n 1 248 HIS n 1 249 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 249 _entity_src_gen.gene_src_common_name mouse _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name 'Pichia pastoris' _entity_src_gen.pdbx_host_org_scientific_name 'Komagataella pastoris' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 4922 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain KM71H _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PPICZ-ALPHA _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 4LAQ _struct_ref.pdbx_db_accession 4LAQ _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4LAQ _struct_ref_seq.pdbx_strand_id H _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 249 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 4LAQ _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 237 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 237 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MLT non-polymer . D-MALATE '(2R)-2-HYDROXYBUTANEDIOIC ACID; 2-HYDROXY-SUCCINIC ACID' 'C4 H6 O5' 134.087 NI non-polymer . 'NICKEL (II) ION' ? 'Ni 2' 58.693 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4LAQ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.35 _exptl_crystal.density_percent_sol 47.58 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 287.15 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '1.6M ammonium sulfate, 240 mM imidazole malate, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 287.15K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.pdbx_collection_date 2009-12-16 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97946 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRL BEAMLINE BL9-1' _diffrn_source.pdbx_synchrotron_site SSRL _diffrn_source.pdbx_synchrotron_beamline BL9-1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97946 # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4LAQ _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 48.03 _reflns.d_resolution_high 2.38 _reflns.number_obs 7243 _reflns.number_all ? _reflns.percent_possible_obs 99.6 _reflns.pdbx_Rmerge_I_obs 0.82 _reflns.pdbx_Rsym_value 0.0234 _reflns.pdbx_netI_over_sigmaI 42.5 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 10.7 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4LAQ _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 5601 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 36.09 _refine.ls_d_res_high 2.80 _refine.ls_percent_reflns_obs 99.85 _refine.ls_R_factor_obs 0.21021 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.20775 _refine.ls_R_factor_R_free 0.26988 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.6 _refine.ls_number_reflns_R_free 271 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.939 _refine.correlation_coeff_Fo_to_Fc_free 0.896 _refine.B_iso_mean 71.645 _refine.aniso_B[1][1] 0.00 _refine.aniso_B[2][2] 0.00 _refine.aniso_B[3][3] 0.00 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free 0.425 _refine.overall_SU_ML 0.310 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 35.675 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1724 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 15 _refine_hist.number_atoms_solvent 7 _refine_hist.number_atoms_total 1746 _refine_hist.d_res_high 2.80 _refine_hist.d_res_low 36.09 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.013 0.020 ? 1746 'X-RAY DIFFRACTION' ? r_bond_other_d 0.007 0.020 ? 1529 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.573 1.928 ? 2361 'X-RAY DIFFRACTION' ? r_angle_other_deg 1.970 3.002 ? 3531 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 17.495 5.000 ? 210 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 35.772 23.143 ? 70 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 18.067 15.000 ? 268 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 23.883 15.000 ? 6 'X-RAY DIFFRACTION' ? r_chiral_restr 0.091 0.200 ? 254 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.006 0.021 ? 1930 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.003 0.020 ? 416 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.800 _refine_ls_shell.d_res_low 2.873 _refine_ls_shell.number_reflns_R_work 410 _refine_ls_shell.R_factor_R_work 0.285 _refine_ls_shell.percent_reflns_obs 99.77 _refine_ls_shell.R_factor_R_free 0.315 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 18 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 4LAQ _struct.title 'Crystal structure of a therapeutic single chain antibody in the free form' _struct.pdbx_descriptor 'Single chain antibody fragment scFv6H4' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4LAQ _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' _struct_keywords.text 'methamphetamine, anti-methamphetamine antibody, therapeutic antibody, scFv, IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id SER _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 86 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id THR _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 90 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id SER _struct_conf.beg_auth_asym_id H _struct_conf.beg_auth_seq_id 86 _struct_conf.end_auth_comp_id THR _struct_conf.end_auth_asym_id H _struct_conf.end_auth_seq_id 90 _struct_conf.pdbx_PDB_helix_class 5 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 22 SG ? ? ? 1_555 A CYS 95 SG ? ? H CYS 22 H CYS 95 1_555 ? ? ? ? ? ? ? 1.544 ? disulf2 disulf ? ? A CYS 155 SG ? ? ? 1_555 A CYS 221 SG ? ? H CYS 143 H CYS 209 1_555 ? ? ? ? ? ? ? 2.065 ? metalc1 metalc ? ? A HIS 246 NE2 ? ? ? 1_555 D NI . NI ? ? H HIS 234 H NI 303 1_555 ? ? ? ? ? ? ? 2.176 ? metalc2 metalc ? ? A HIS 244 NE2 ? ? ? 1_555 D NI . NI ? ? H HIS 232 H NI 303 1_555 ? ? ? ? ? ? ? 2.274 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 SER 139 A . ? SER 127 H PRO 140 A ? PRO 128 H 1 -0.76 2 PHE 227 A . ? PHE 215 H PRO 228 A ? PRO 216 H 1 -4.98 3 HIS 248 A . ? HIS 236 H HIS 249 A ? HIS 237 H 1 -8.49 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 5 ? C ? 5 ? D ? 3 ? E ? 6 ? F ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel E 1 2 ? parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel E 4 5 ? anti-parallel E 5 6 ? anti-parallel F 1 2 ? parallel F 2 3 ? anti-parallel F 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 18 ? CYS A 22 ? LEU H 18 CYS H 22 A 2 GLN A 77 ? LEU A 82 ? GLN H 77 LEU H 82 A 3 ILE A 67 ? ASP A 72 ? ILE H 67 ASP H 72 B 1 THR A 57 ? TYR A 59 ? THR H 57 TYR H 59 B 2 LEU A 45 ? SER A 52 ? LEU H 45 SER H 52 B 3 TYR A 33 ? GLN A 39 ? TYR H 33 GLN H 39 B 4 ALA A 91 ? SER A 100 ? ALA H 91 SER H 100 B 5 ALA A 104 ? TRP A 108 ? ALA H 104 TRP H 108 C 1 THR A 57 ? TYR A 59 ? THR H 57 TYR H 59 C 2 LEU A 45 ? SER A 52 ? LEU H 45 SER H 52 C 3 TYR A 33 ? GLN A 39 ? TYR H 33 GLN H 39 C 4 ALA A 91 ? SER A 100 ? ALA H 91 SER H 100 C 5 THR A 112 ? VAL A 114 ? THR H 112 VAL H 114 D 1 LEU A 136 ? SER A 139 ? LEU H 124 SER H 127 D 2 VAL A 151 ? VAL A 161 ? VAL H 139 VAL H 149 D 3 PHE A 195 ? ILE A 208 ? PHE H 183 ILE H 196 E 1 ILE A 142 ? ALA A 145 ? ILE H 130 ALA H 133 E 2 THR A 235 ? ILE A 239 ? THR H 223 ILE H 227 E 3 SER A 218 ? GLN A 223 ? SER H 206 GLN H 211 E 4 LEU A 166 ? GLN A 171 ? LEU H 154 GLN H 159 E 5 LYS A 178 ? TYR A 182 ? LYS H 166 TYR H 170 E 6 ASN A 186 ? LEU A 187 ? ASN H 174 LEU H 175 F 1 ILE A 142 ? ALA A 145 ? ILE H 130 ALA H 133 F 2 THR A 235 ? ILE A 239 ? THR H 223 ILE H 227 F 3 SER A 218 ? GLN A 223 ? SER H 206 GLN H 211 F 4 THR A 230 ? PHE A 231 ? THR H 218 PHE H 219 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N CYS A 22 ? N CYS H 22 O VAL A 78 ? O VAL H 78 A 2 3 O TYR A 79 ? O TYR H 79 N THR A 70 ? N THR H 70 B 1 2 O TYR A 58 ? O TYR H 58 N TYR A 50 ? N TYR H 50 B 2 3 O ASP A 46 ? O ASP H 46 N ARG A 38 ? N ARG H 38 B 3 4 N ILE A 37 ? N ILE H 37 O TYR A 94 ? O TYR H 94 B 4 5 N TYR A 97 ? N TYR H 97 O TYR A 107 ? O TYR H 107 C 1 2 O TYR A 58 ? O TYR H 58 N TYR A 50 ? N TYR H 50 C 2 3 O ASP A 46 ? O ASP H 46 N ARG A 38 ? N ARG H 38 C 3 4 N ILE A 37 ? N ILE H 37 O TYR A 94 ? O TYR H 94 C 4 5 N TYR A 93 ? N TYR H 93 O THR A 112 ? O THR H 112 D 1 2 N THR A 137 ? N THR H 125 O SER A 156 ? O SER H 144 D 2 3 N LEU A 153 ? N LEU H 141 O LEU A 206 ? O LEU H 194 E 1 2 N ALA A 145 ? N ALA H 133 O GLU A 238 ? O GLU H 226 E 2 3 O THR A 235 ? O THR H 223 N TYR A 219 ? N TYR H 207 E 3 4 O HIS A 222 ? O HIS H 210 N TYR A 167 ? N TYR H 155 E 4 5 N TRP A 168 ? N TRP H 156 O ILE A 181 ? O ILE H 169 E 5 6 N TYR A 182 ? N TYR H 170 O ASN A 186 ? O ASN H 174 F 1 2 N ALA A 145 ? N ALA H 133 O GLU A 238 ? O GLU H 226 F 2 3 O THR A 235 ? O THR H 223 N TYR A 219 ? N TYR H 207 F 3 4 N GLN A 223 ? N GLN H 211 O THR A 230 ? O THR H 218 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE SO4 H 201' AC2 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE MLT L 201' AC3 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE NI L 202' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 SER A 23 ? SER H 23 . ? 10_545 ? 2 AC1 6 SER A 23 ? SER H 23 . ? 7_555 ? 3 AC1 6 SER A 23 ? SER H 23 . ? 1_555 ? 4 AC1 6 GLN A 77 ? GLN H 77 . ? 7_555 ? 5 AC1 6 GLN A 77 ? GLN H 77 . ? 10_545 ? 6 AC1 6 GLN A 77 ? GLN H 77 . ? 1_555 ? 7 AC2 6 TYR A 33 ? TYR H 33 . ? 4_545 ? 8 AC2 6 TYR A 50 ? TYR H 50 . ? 4_545 ? 9 AC2 6 HIS A 244 ? HIS H 232 . ? 1_555 ? 10 AC2 6 HIS A 245 ? HIS H 233 . ? 1_555 ? 11 AC2 6 HIS A 246 ? HIS H 234 . ? 10_545 ? 12 AC2 6 HIS A 247 ? HIS H 235 . ? 1_555 ? 13 AC3 6 HIS A 244 ? HIS H 232 . ? 1_555 ? 14 AC3 6 HIS A 244 ? HIS H 232 . ? 7_555 ? 15 AC3 6 HIS A 244 ? HIS H 232 . ? 10_545 ? 16 AC3 6 HIS A 246 ? HIS H 234 . ? 1_555 ? 17 AC3 6 HIS A 246 ? HIS H 234 . ? 10_545 ? 18 AC3 6 HIS A 246 ? HIS H 234 . ? 7_555 ? # _database_PDB_matrix.entry_id 4LAQ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4LAQ _atom_sites.fract_transf_matrix[1][1] 0.011320 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011320 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011320 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NI O S # loop_ _database_PDB_caveat.text 'CLOSE CONTACTS BASED ON CRYSTAL SYMMETRY FOR SO4 H201 ATOMS O1/O3 AND O2/O3' # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLU 1 1 ? ? ? H . n A 1 2 VAL 2 2 ? ? ? H . n A 1 3 GLN 3 3 ? ? ? H . n A 1 4 LEU 4 4 ? ? ? H . n A 1 5 GLN 5 5 ? ? ? H . n A 1 6 GLU 6 6 ? ? ? H . n A 1 7 SER 7 7 ? ? ? H . n A 1 8 GLY 8 8 ? ? ? H . n A 1 9 PRO 9 9 ? ? ? H . n A 1 10 SER 10 10 ? ? ? H . n A 1 11 LEU 11 11 ? ? ? H . n A 1 12 VAL 12 12 ? ? ? H . n A 1 13 LYS 13 13 ? ? ? H . n A 1 14 PRO 14 14 ? ? ? H . n A 1 15 SER 15 15 ? ? ? H . n A 1 16 GLN 16 16 16 GLN GLN H . n A 1 17 THR 17 17 17 THR THR H . n A 1 18 LEU 18 18 18 LEU LEU H . n A 1 19 SER 19 19 19 SER SER H . n A 1 20 LEU 20 20 20 LEU LEU H . n A 1 21 THR 21 21 21 THR THR H . n A 1 22 CYS 22 22 22 CYS CYS H . n A 1 23 SER 23 23 23 SER SER H . n A 1 24 VAL 24 24 24 VAL VAL H . n A 1 25 THR 25 25 25 THR THR H . n A 1 26 GLY 26 26 26 GLY GLY H . n A 1 27 ASP 27 27 27 ASP ASP H . n A 1 28 SER 28 28 28 SER SER H . n A 1 29 VAL 29 29 29 VAL VAL H . n A 1 30 THR 30 30 30 THR THR H . n A 1 31 SER 31 31 31 SER SER H . n A 1 32 GLY 32 32 32 GLY GLY H . n A 1 33 TYR 33 33 33 TYR TYR H . n A 1 34 TRP 34 34 34 TRP TRP H . n A 1 35 SER 35 35 35 SER SER H . n A 1 36 TRP 36 36 36 TRP TRP H . n A 1 37 ILE 37 37 37 ILE ILE H . n A 1 38 ARG 38 38 38 ARG ARG H . n A 1 39 GLN 39 39 39 GLN GLN H . n A 1 40 PHE 40 40 40 PHE PHE H . n A 1 41 PRO 41 41 41 PRO PRO H . n A 1 42 GLY 42 42 42 GLY GLY H . n A 1 43 ASN 43 43 43 ASN ASN H . n A 1 44 LYS 44 44 44 LYS LYS H . n A 1 45 LEU 45 45 45 LEU LEU H . n A 1 46 ASP 46 46 46 ASP ASP H . n A 1 47 TYR 47 47 47 TYR TYR H . n A 1 48 MET 48 48 48 MET MET H . n A 1 49 GLY 49 49 49 GLY GLY H . n A 1 50 TYR 50 50 50 TYR TYR H . n A 1 51 ILE 51 51 51 ILE ILE H . n A 1 52 SER 52 52 52 SER SER H . n A 1 53 TYR 53 53 53 TYR TYR H . n A 1 54 ARG 54 54 54 ARG ARG H . n A 1 55 GLY 55 55 55 GLY GLY H . n A 1 56 SER 56 56 56 SER SER H . n A 1 57 THR 57 57 57 THR THR H . n A 1 58 TYR 58 58 58 TYR TYR H . n A 1 59 TYR 59 59 59 TYR TYR H . n A 1 60 ASN 60 60 60 ASN ASN H . n A 1 61 PRO 61 61 61 PRO PRO H . n A 1 62 SER 62 62 62 SER SER H . n A 1 63 LEU 63 63 63 LEU LEU H . n A 1 64 LYS 64 64 64 LYS LYS H . n A 1 65 SER 65 65 65 SER SER H . n A 1 66 ARG 66 66 66 ARG ARG H . n A 1 67 ILE 67 67 67 ILE ILE H . n A 1 68 SER 68 68 68 SER SER H . n A 1 69 ILE 69 69 69 ILE ILE H . n A 1 70 THR 70 70 70 THR THR H . n A 1 71 ARG 71 71 71 ARG ARG H . n A 1 72 ASP 72 72 72 ASP ASP H . n A 1 73 THR 73 73 73 THR THR H . n A 1 74 SER 74 74 74 SER SER H . n A 1 75 LYS 75 75 75 LYS LYS H . n A 1 76 ASN 76 76 76 ASN ASN H . n A 1 77 GLN 77 77 77 GLN GLN H . n A 1 78 VAL 78 78 78 VAL VAL H . n A 1 79 TYR 79 79 79 TYR TYR H . n A 1 80 LEU 80 80 80 LEU LEU H . n A 1 81 GLN 81 81 81 GLN GLN H . n A 1 82 LEU 82 82 82 LEU LEU H . n A 1 83 LYS 83 83 82 LYS LYS H . n A 1 84 SER 84 84 82 SER SER H . n A 1 85 VAL 85 85 82 VAL VAL H . n A 1 86 SER 86 86 83 SER SER H . n A 1 87 SER 87 87 84 SER SER H . n A 1 88 GLU 88 88 85 GLU GLU H . n A 1 89 ASP 89 89 86 ASP ASP H . n A 1 90 THR 90 90 87 THR THR H . n A 1 91 ALA 91 91 88 ALA ALA H . n A 1 92 THR 92 92 89 THR THR H . n A 1 93 TYR 93 93 90 TYR TYR H . n A 1 94 TYR 94 94 91 TYR TYR H . n A 1 95 CYS 95 95 92 CYS CYS H . n A 1 96 SER 96 96 93 SER SER H . n A 1 97 TYR 97 97 94 TYR TYR H . n A 1 98 PHE 98 98 95 PHE PHE H . n A 1 99 ASP 99 99 96 ASP ASP H . n A 1 100 SER 100 100 97 SER SER H . n A 1 101 ASP 101 101 98 ASP ASP H . n A 1 102 ASP 102 102 99 ASP ASP H . n A 1 103 TYR 103 103 100 TYR TYR H . n A 1 104 ALA 104 104 100 ALA ALA H . n A 1 105 MET 105 105 100 MET MET H . n A 1 106 GLU 106 106 101 GLU GLU H . n A 1 107 TYR 107 107 102 TYR TYR H . n A 1 108 TRP 108 108 103 TRP TRP H . n A 1 109 GLY 109 109 104 GLY GLY H . n A 1 110 GLN 110 110 105 GLN GLN H . n A 1 111 GLY 111 111 106 GLY GLY H . n A 1 112 THR 112 112 107 THR THR H . n A 1 113 SER 113 113 108 SER SER H . n A 1 114 VAL 114 114 109 VAL VAL H . n A 1 115 THR 115 115 110 THR THR H . n A 1 116 VAL 116 116 111 VAL VAL H . n A 1 117 SER 117 117 112 SER SER H . n A 1 118 GLY 118 118 113 GLY GLY H . n A 1 119 GLY 119 119 114 GLY GLY H . n A 1 120 GLY 120 119 ? ? ? H A n A 1 121 GLY 121 119 ? ? ? H B n A 1 122 SER 122 119 ? ? ? H C n A 1 123 GLY 123 119 ? ? ? H D n A 1 124 GLY 124 119 ? ? ? H E n A 1 125 GLY 125 119 ? ? ? H F n A 1 126 GLY 126 119 ? ? ? H G n A 1 127 SER 127 119 ? ? ? H H n A 1 128 GLY 128 119 ? ? ? H I n A 1 129 GLY 129 119 ? ? ? H J n A 1 130 GLY 130 119 ? ? ? H K n A 1 131 GLY 131 119 ? ? ? H L n A 1 132 SER 132 120 1 SER SER H . n A 1 133 GLN 133 121 1 GLN GLN H . n A 1 134 ILE 134 122 2 ILE ILE H . n A 1 135 VAL 135 123 3 VAL VAL H . n A 1 136 LEU 136 124 4 LEU LEU H . n A 1 137 THR 137 125 5 THR THR H . n A 1 138 GLN 138 126 6 GLN GLN H . n A 1 139 SER 139 127 7 SER SER H . n A 1 140 PRO 140 128 8 PRO PRO H . n A 1 141 ALA 141 129 9 ALA ALA H . n A 1 142 ILE 142 130 10 ILE ILE H . n A 1 143 MET 143 131 11 MET MET H . n A 1 144 SER 144 132 12 SER SER H . n A 1 145 ALA 145 133 13 ALA ALA H . n A 1 146 SER 146 134 14 SER SER H . n A 1 147 PRO 147 135 15 PRO PRO H . n A 1 148 GLY 148 136 16 GLY GLY H . n A 1 149 GLU 149 137 17 GLU GLU H . n A 1 150 LYS 150 138 18 LYS LYS H . n A 1 151 VAL 151 139 19 VAL VAL H . n A 1 152 THR 152 140 20 THR THR H . n A 1 153 LEU 153 141 21 LEU LEU H . n A 1 154 THR 154 142 22 THR THR H . n A 1 155 CYS 155 143 23 CYS CYS H . n A 1 156 SER 156 144 24 SER SER H . n A 1 157 ALA 157 145 25 ALA ALA H . n A 1 158 SER 158 146 26 SER SER H . n A 1 159 SER 159 147 27 SER SER H . n A 1 160 SER 160 148 27 SER SER H . n A 1 161 VAL 161 149 28 VAL VAL H . n A 1 162 SER 162 150 29 SER SER H . n A 1 163 SER 163 151 30 SER SER H . n A 1 164 SER 164 152 31 SER SER H . n A 1 165 HIS 165 153 32 HIS HIS H . n A 1 166 LEU 166 154 33 LEU LEU H . n A 1 167 TYR 167 155 34 TYR TYR H . n A 1 168 TRP 168 156 35 TRP TRP H . n A 1 169 TYR 169 157 36 TYR TYR H . n A 1 170 GLN 170 158 37 GLN GLN H . n A 1 171 GLN 171 159 38 GLN GLN H . n A 1 172 LYS 172 160 39 LYS LYS H . n A 1 173 PRO 173 161 40 PRO PRO H . n A 1 174 GLY 174 162 41 GLY GLY H . n A 1 175 SER 175 163 42 SER SER H . n A 1 176 SER 176 164 43 SER SER H . n A 1 177 PRO 177 165 44 PRO PRO H . n A 1 178 LYS 178 166 45 LYS LYS H . n A 1 179 LEU 179 167 46 LEU LEU H . n A 1 180 TRP 180 168 47 TRP TRP H . n A 1 181 ILE 181 169 48 ILE ILE H . n A 1 182 TYR 182 170 49 TYR TYR H . n A 1 183 SER 183 171 50 SER SER H . n A 1 184 THR 184 172 51 THR THR H . n A 1 185 SER 185 173 52 SER SER H . n A 1 186 ASN 186 174 53 ASN ASN H . n A 1 187 LEU 187 175 54 LEU LEU H . n A 1 188 ALA 188 176 55 ALA ALA H . n A 1 189 SER 189 177 56 SER SER H . n A 1 190 GLY 190 178 57 GLY GLY H . n A 1 191 VAL 191 179 58 VAL VAL H . n A 1 192 PRO 192 180 59 PRO PRO H . n A 1 193 ALA 193 181 60 ALA ALA H . n A 1 194 ARG 194 182 61 ARG ARG H . n A 1 195 PHE 195 183 62 PHE PHE H . n A 1 196 SER 196 184 63 SER SER H . n A 1 197 GLY 197 185 64 GLY GLY H . n A 1 198 SER 198 186 65 SER SER H . n A 1 199 GLY 199 187 66 GLY GLY H . n A 1 200 SER 200 188 67 SER SER H . n A 1 201 GLY 201 189 68 GLY GLY H . n A 1 202 THR 202 190 69 THR THR H . n A 1 203 SER 203 191 70 SER SER H . n A 1 204 TYR 204 192 71 TYR TYR H . n A 1 205 SER 205 193 72 SER SER H . n A 1 206 LEU 206 194 73 LEU LEU H . n A 1 207 THR 207 195 74 THR THR H . n A 1 208 ILE 208 196 75 ILE ILE H . n A 1 209 SER 209 197 76 SER SER H . n A 1 210 SER 210 198 77 SER SER H . n A 1 211 MET 211 199 78 MET MET H . n A 1 212 GLU 212 200 79 GLU GLU H . n A 1 213 ALA 213 201 80 ALA ALA H . n A 1 214 GLU 214 202 81 GLU GLU H . n A 1 215 ASP 215 203 82 ASP ASP H . n A 1 216 ALA 216 204 83 ALA ALA H . n A 1 217 ALA 217 205 84 ALA ALA H . n A 1 218 SER 218 206 85 SER SER H . n A 1 219 TYR 219 207 86 TYR TYR H . n A 1 220 PHE 220 208 87 PHE PHE H . n A 1 221 CYS 221 209 88 CYS CYS H . n A 1 222 HIS 222 210 89 HIS HIS H . n A 1 223 GLN 223 211 90 GLN GLN H . n A 1 224 TRP 224 212 91 TRP TRP H . n A 1 225 SER 225 213 92 SER SER H . n A 1 226 SER 226 214 93 SER SER H . n A 1 227 PHE 227 215 94 PHE PHE H . n A 1 228 PRO 228 216 95 PRO PRO H . n A 1 229 PHE 229 217 96 PHE PHE H . n A 1 230 THR 230 218 97 THR THR H . n A 1 231 PHE 231 219 98 PHE PHE H . n A 1 232 GLY 232 220 99 GLY GLY H . n A 1 233 SER 233 221 100 SER SER H . n A 1 234 GLY 234 222 101 GLY GLY H . n A 1 235 THR 235 223 102 THR THR H . n A 1 236 LYS 236 224 103 LYS LYS H . n A 1 237 LEU 237 225 104 LEU LEU H . n A 1 238 GLU 238 226 105 GLU GLU H . n A 1 239 ILE 239 227 106 ILE ILE H . n A 1 240 LYS 240 228 106 LYS LYS H . n A 1 241 ARG 241 229 107 ARG ARG H . n A 1 242 ALA 242 230 108 ALA ALA H . n A 1 243 PRO 243 231 109 PRO PRO H . n A 1 244 HIS 244 232 110 HIS HIS H . n A 1 245 HIS 245 233 111 HIS HIS H . n A 1 246 HIS 246 234 112 HIS HIS H . n A 1 247 HIS 247 235 113 HIS HIS H . n A 1 248 HIS 248 236 114 HIS HIS H . n A 1 249 HIS 249 237 115 HIS HIS H . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 1 301 201 SO4 SO4 H . C 3 MLT 1 302 202 MLT MLT H . D 4 NI 1 303 203 NI NI H . E 5 HOH 1 401 209 HOH HOH H . E 5 HOH 2 402 208 HOH HOH H . E 5 HOH 3 403 207 HOH HOH H . E 5 HOH 4 404 205 HOH HOH H . E 5 HOH 5 405 212 HOH HOH H . E 5 HOH 6 406 204 HOH HOH H . E 5 HOH 7 407 211 HOH HOH H . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 9560 ? 1 MORE -88 ? 1 'SSA (A^2)' 26550 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 7_555 -z+1/2,-x,y+1/2 0.0000000000 0.0000000000 -1.0000000000 44.1700000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 44.1700000000 3 'crystal symmetry operation' 10_545 -y,z-1/2,-x+1/2 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 -44.1700000000 -1.0000000000 0.0000000000 0.0000000000 44.1700000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 H SO4 301 ? B SO4 . 2 1 H SO4 301 ? B SO4 . 3 1 H NI 303 ? D NI . # _pdbx_struct_conn_angle.id 1 _pdbx_struct_conn_angle.ptnr1_label_atom_id NE2 _pdbx_struct_conn_angle.ptnr1_label_alt_id ? _pdbx_struct_conn_angle.ptnr1_label_asym_id A _pdbx_struct_conn_angle.ptnr1_label_comp_id HIS _pdbx_struct_conn_angle.ptnr1_label_seq_id 246 _pdbx_struct_conn_angle.ptnr1_auth_atom_id ? _pdbx_struct_conn_angle.ptnr1_auth_asym_id H _pdbx_struct_conn_angle.ptnr1_auth_comp_id HIS _pdbx_struct_conn_angle.ptnr1_auth_seq_id 234 _pdbx_struct_conn_angle.ptnr1_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr1_symmetry 1_555 _pdbx_struct_conn_angle.ptnr2_label_atom_id NI _pdbx_struct_conn_angle.ptnr2_label_alt_id ? _pdbx_struct_conn_angle.ptnr2_label_asym_id D _pdbx_struct_conn_angle.ptnr2_label_comp_id NI _pdbx_struct_conn_angle.ptnr2_label_seq_id . _pdbx_struct_conn_angle.ptnr2_auth_atom_id ? _pdbx_struct_conn_angle.ptnr2_auth_asym_id H _pdbx_struct_conn_angle.ptnr2_auth_comp_id NI _pdbx_struct_conn_angle.ptnr2_auth_seq_id 303 _pdbx_struct_conn_angle.ptnr2_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr2_symmetry 1_555 _pdbx_struct_conn_angle.ptnr3_label_atom_id NE2 _pdbx_struct_conn_angle.ptnr3_label_alt_id ? _pdbx_struct_conn_angle.ptnr3_label_asym_id A _pdbx_struct_conn_angle.ptnr3_label_comp_id HIS _pdbx_struct_conn_angle.ptnr3_label_seq_id 244 _pdbx_struct_conn_angle.ptnr3_auth_atom_id ? _pdbx_struct_conn_angle.ptnr3_auth_asym_id H _pdbx_struct_conn_angle.ptnr3_auth_comp_id HIS _pdbx_struct_conn_angle.ptnr3_auth_seq_id 232 _pdbx_struct_conn_angle.ptnr3_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr3_symmetry 1_555 _pdbx_struct_conn_angle.value 94.0 _pdbx_struct_conn_angle.value_esd ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-01-08 2 'Structure model' 1 1 2019-07-17 3 'Structure model' 2 0 2019-12-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Refinement description' 3 3 'Structure model' Advisory 4 3 'Structure model' 'Atomic model' 5 3 'Structure model' 'Data collection' 6 3 'Structure model' 'Database references' 7 3 'Structure model' 'Derived calculations' 8 3 'Structure model' 'Polymer sequence' 9 3 'Structure model' 'Source and taxonomy' 10 3 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' software 2 3 'Structure model' atom_site 3 3 'Structure model' atom_site_anisotrop 4 3 'Structure model' citation 5 3 'Structure model' citation_author 6 3 'Structure model' entity 7 3 'Structure model' entity_poly 8 3 'Structure model' entity_poly_seq 9 3 'Structure model' entity_src_gen 10 3 'Structure model' pdbx_entity_nonpoly 11 3 'Structure model' pdbx_nonpoly_scheme 12 3 'Structure model' pdbx_poly_seq_scheme 13 3 'Structure model' pdbx_struct_assembly 14 3 'Structure model' pdbx_struct_assembly_gen 15 3 'Structure model' pdbx_struct_assembly_prop 16 3 'Structure model' pdbx_struct_conn_angle 17 3 'Structure model' pdbx_struct_oper_list 18 3 'Structure model' pdbx_struct_sheet_hbond 19 3 'Structure model' pdbx_struct_special_symmetry 20 3 'Structure model' pdbx_unobs_or_zero_occ_residues 21 3 'Structure model' pdbx_validate_close_contact 22 3 'Structure model' pdbx_validate_peptide_omega 23 3 'Structure model' pdbx_validate_rmsd_angle 24 3 'Structure model' pdbx_validate_rmsd_bond 25 3 'Structure model' pdbx_validate_symm_contact 26 3 'Structure model' pdbx_validate_torsion 27 3 'Structure model' struct 28 3 'Structure model' struct_asym 29 3 'Structure model' struct_conf 30 3 'Structure model' struct_conn 31 3 'Structure model' struct_mon_prot_cis 32 3 'Structure model' struct_ref 33 3 'Structure model' struct_ref_seq 34 3 'Structure model' struct_sheet_range 35 3 'Structure model' struct_site_gen # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_software.classification' 2 2 'Structure model' '_software.name' 3 2 'Structure model' '_software.version' 4 3 'Structure model' '_atom_site.B_iso_or_equiv' 5 3 'Structure model' '_atom_site.Cartn_x' 6 3 'Structure model' '_atom_site.Cartn_y' 7 3 'Structure model' '_atom_site.Cartn_z' 8 3 'Structure model' '_atom_site.auth_asym_id' 9 3 'Structure model' '_atom_site.auth_seq_id' 10 3 'Structure model' '_atom_site.label_asym_id' 11 3 'Structure model' '_atom_site.label_entity_id' 12 3 'Structure model' '_atom_site.label_seq_id' 13 3 'Structure model' '_atom_site.pdbx_PDB_ins_code' 14 3 'Structure model' '_atom_site_anisotrop.U[1][1]' 15 3 'Structure model' '_atom_site_anisotrop.U[1][2]' 16 3 'Structure model' '_atom_site_anisotrop.U[1][3]' 17 3 'Structure model' '_atom_site_anisotrop.U[2][2]' 18 3 'Structure model' '_atom_site_anisotrop.U[2][3]' 19 3 'Structure model' '_atom_site_anisotrop.U[3][3]' 20 3 'Structure model' '_atom_site_anisotrop.pdbx_PDB_ins_code' 21 3 'Structure model' '_atom_site_anisotrop.pdbx_auth_asym_id' 22 3 'Structure model' '_atom_site_anisotrop.pdbx_auth_seq_id' 23 3 'Structure model' '_atom_site_anisotrop.pdbx_label_asym_id' 24 3 'Structure model' '_atom_site_anisotrop.pdbx_label_seq_id' 25 3 'Structure model' '_citation.journal_abbrev' 26 3 'Structure model' '_citation.journal_volume' 27 3 'Structure model' '_citation.page_first' 28 3 'Structure model' '_citation.page_last' 29 3 'Structure model' '_citation.pdbx_database_id_DOI' 30 3 'Structure model' '_citation.pdbx_database_id_PubMed' 31 3 'Structure model' '_citation.title' 32 3 'Structure model' '_citation.year' 33 3 'Structure model' '_citation_author.name' 34 3 'Structure model' '_pdbx_entity_nonpoly.entity_id' 35 3 'Structure model' '_pdbx_nonpoly_scheme.asym_id' 36 3 'Structure model' '_pdbx_nonpoly_scheme.auth_seq_num' 37 3 'Structure model' '_pdbx_nonpoly_scheme.entity_id' 38 3 'Structure model' '_pdbx_nonpoly_scheme.ndb_seq_num' 39 3 'Structure model' '_pdbx_nonpoly_scheme.pdb_seq_num' 40 3 'Structure model' '_pdbx_nonpoly_scheme.pdb_strand_id' 41 3 'Structure model' '_pdbx_struct_assembly.details' 42 3 'Structure model' '_pdbx_struct_assembly.method_details' 43 3 'Structure model' '_pdbx_struct_assembly.oligomeric_count' 44 3 'Structure model' '_pdbx_struct_assembly.oligomeric_details' 45 3 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 46 3 'Structure model' '_pdbx_struct_assembly_gen.oper_expression' 47 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 48 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 49 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 50 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 51 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id' 52 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 53 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 54 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 55 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 56 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 57 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 58 3 'Structure model' '_pdbx_struct_sheet_hbond.range_1_auth_asym_id' 59 3 'Structure model' '_pdbx_struct_sheet_hbond.range_1_auth_seq_id' 60 3 'Structure model' '_pdbx_struct_sheet_hbond.range_1_label_asym_id' 61 3 'Structure model' '_pdbx_struct_sheet_hbond.range_1_label_seq_id' 62 3 'Structure model' '_pdbx_struct_sheet_hbond.range_2_auth_asym_id' 63 3 'Structure model' '_pdbx_struct_sheet_hbond.range_2_auth_seq_id' 64 3 'Structure model' '_pdbx_struct_sheet_hbond.range_2_label_asym_id' 65 3 'Structure model' '_pdbx_struct_sheet_hbond.range_2_label_seq_id' 66 3 'Structure model' '_pdbx_struct_special_symmetry.auth_asym_id' 67 3 'Structure model' '_pdbx_struct_special_symmetry.auth_seq_id' 68 3 'Structure model' '_pdbx_struct_special_symmetry.label_asym_id' 69 3 'Structure model' '_pdbx_validate_close_contact.auth_asym_id_1' 70 3 'Structure model' '_pdbx_validate_close_contact.auth_asym_id_2' 71 3 'Structure model' '_pdbx_validate_close_contact.auth_seq_id_1' 72 3 'Structure model' '_pdbx_validate_close_contact.auth_seq_id_2' 73 3 'Structure model' '_pdbx_validate_peptide_omega.auth_asym_id_1' 74 3 'Structure model' '_pdbx_validate_peptide_omega.auth_asym_id_2' 75 3 'Structure model' '_pdbx_validate_peptide_omega.auth_seq_id_1' 76 3 'Structure model' '_pdbx_validate_peptide_omega.auth_seq_id_2' 77 3 'Structure model' '_pdbx_validate_rmsd_angle.auth_asym_id_1' 78 3 'Structure model' '_pdbx_validate_rmsd_angle.auth_asym_id_2' 79 3 'Structure model' '_pdbx_validate_rmsd_angle.auth_asym_id_3' 80 3 'Structure model' '_pdbx_validate_rmsd_angle.auth_seq_id_1' 81 3 'Structure model' '_pdbx_validate_rmsd_angle.auth_seq_id_2' 82 3 'Structure model' '_pdbx_validate_rmsd_angle.auth_seq_id_3' 83 3 'Structure model' '_pdbx_validate_rmsd_bond.PDB_ins_code_1' 84 3 'Structure model' '_pdbx_validate_rmsd_bond.auth_seq_id_1' 85 3 'Structure model' '_pdbx_validate_rmsd_bond.auth_seq_id_2' 86 3 'Structure model' '_pdbx_validate_symm_contact.PDB_ins_code_1' 87 3 'Structure model' '_pdbx_validate_symm_contact.auth_seq_id_1' 88 3 'Structure model' '_pdbx_validate_symm_contact.auth_seq_id_2' 89 3 'Structure model' '_pdbx_validate_torsion.PDB_ins_code' 90 3 'Structure model' '_pdbx_validate_torsion.auth_asym_id' 91 3 'Structure model' '_pdbx_validate_torsion.auth_seq_id' 92 3 'Structure model' '_struct.pdbx_descriptor' 93 3 'Structure model' '_struct.title' 94 3 'Structure model' '_struct_conf.beg_auth_seq_id' 95 3 'Structure model' '_struct_conf.beg_label_seq_id' 96 3 'Structure model' '_struct_conf.end_auth_seq_id' 97 3 'Structure model' '_struct_conf.end_label_seq_id' 98 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 99 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 100 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 101 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 102 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 103 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 104 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 105 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' 106 3 'Structure model' '_struct_mon_prot_cis.auth_asym_id' 107 3 'Structure model' '_struct_mon_prot_cis.auth_seq_id' 108 3 'Structure model' '_struct_mon_prot_cis.label_asym_id' 109 3 'Structure model' '_struct_mon_prot_cis.label_seq_id' 110 3 'Structure model' '_struct_mon_prot_cis.pdbx_auth_asym_id_2' 111 3 'Structure model' '_struct_mon_prot_cis.pdbx_auth_seq_id_2' 112 3 'Structure model' '_struct_mon_prot_cis.pdbx_label_asym_id_2' 113 3 'Structure model' '_struct_mon_prot_cis.pdbx_label_seq_id_2' 114 3 'Structure model' '_struct_sheet_range.beg_auth_asym_id' 115 3 'Structure model' '_struct_sheet_range.beg_auth_seq_id' 116 3 'Structure model' '_struct_sheet_range.beg_label_asym_id' 117 3 'Structure model' '_struct_sheet_range.beg_label_seq_id' 118 3 'Structure model' '_struct_sheet_range.end_auth_asym_id' 119 3 'Structure model' '_struct_sheet_range.end_auth_seq_id' 120 3 'Structure model' '_struct_sheet_range.end_label_asym_id' 121 3 'Structure model' '_struct_sheet_range.end_label_seq_id' 122 3 'Structure model' '_struct_sheet_range.pdbx_beg_PDB_ins_code' 123 3 'Structure model' '_struct_site_gen.auth_asym_id' 124 3 'Structure model' '_struct_site_gen.auth_seq_id' 125 3 'Structure model' '_struct_site_gen.label_asym_id' 126 3 'Structure model' '_struct_site_gen.label_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 6.8903 -15.9573 17.5079 0.0297 0.2079 0.1117 0.0552 -0.0218 0.0438 2.2769 4.1128 4.5603 -0.8559 -0.1054 -0.7750 -0.0182 0.0115 0.0828 -0.0014 0.0863 0.3575 -0.1630 -0.3139 -0.0681 'X-RAY DIFFRACTION' 2 ? refined 22.7209 -20.4729 0.4174 0.3340 0.3965 0.3335 0.0631 0.0250 0.0877 2.5429 2.0922 0.1671 -2.2166 -0.5035 0.5303 0.1087 0.2708 -0.0784 -0.2228 -0.1591 0.0479 -0.0513 0.0027 0.0504 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 H 16 H 114 ? . . . . ? 'X-RAY DIFFRACTION' 2 1 H 201 H 201 ? . . . . ? 'X-RAY DIFFRACTION' 3 2 L 1 L 115 ? . . . . ? 'X-RAY DIFFRACTION' 4 2 L 201 L 201 ? . . . . ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.7.0029 ? 1 CNS refinement . ? 2 HKL-2000 'data collection' . ? 3 HKL-2000 'data reduction' . ? 4 SCALEPACK 'data scaling' . ? 5 CNS phasing . ? 6 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O H SER 198 ? ? O H MET 199 ? ? 1.74 2 1 OD1 H ASN 60 ? ? OG H SER 62 ? ? 1.77 3 1 O H ALA 133 ? ? CG2 H ILE 227 ? ? 2.05 4 1 O H ALA 230 ? ? O H HOH 401 ? ? 2.18 5 1 O H GLU 200 ? ? N H GLU 202 ? ? 2.19 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O2 H SO4 301 ? ? 1_555 O3 H SO4 301 ? ? 10_545 0.03 2 1 O1 H SO4 301 ? ? 1_555 O3 H SO4 301 ? ? 7_555 0.03 3 1 S H SO4 301 ? ? 1_555 O3 H SO4 301 ? ? 7_555 1.43 4 1 NE H ARG 54 ? ? 1_555 OD2 H ASP 102 ? ? 9_555 2.04 5 1 CD1 H TYR 103 ? ? 1_555 O H SER 117 ? ? 7_555 2.07 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 C _pdbx_validate_rmsd_bond.auth_asym_id_1 H _pdbx_validate_rmsd_bond.auth_comp_id_1 MET _pdbx_validate_rmsd_bond.auth_seq_id_1 105 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 N _pdbx_validate_rmsd_bond.auth_asym_id_2 H _pdbx_validate_rmsd_bond.auth_comp_id_2 GLU _pdbx_validate_rmsd_bond.auth_seq_id_2 106 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.496 _pdbx_validate_rmsd_bond.bond_target_value 1.336 _pdbx_validate_rmsd_bond.bond_deviation 0.160 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.023 _pdbx_validate_rmsd_bond.linker_flag Y # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CA _pdbx_validate_rmsd_angle.auth_asym_id_1 H _pdbx_validate_rmsd_angle.auth_comp_id_1 CYS _pdbx_validate_rmsd_angle.auth_seq_id_1 143 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CB _pdbx_validate_rmsd_angle.auth_asym_id_2 H _pdbx_validate_rmsd_angle.auth_comp_id_2 CYS _pdbx_validate_rmsd_angle.auth_seq_id_2 143 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 SG _pdbx_validate_rmsd_angle.auth_asym_id_3 H _pdbx_validate_rmsd_angle.auth_comp_id_3 CYS _pdbx_validate_rmsd_angle.auth_seq_id_3 143 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 120.81 _pdbx_validate_rmsd_angle.angle_target_value 114.20 _pdbx_validate_rmsd_angle.angle_deviation 6.61 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.10 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER H 23 ? ? -159.12 54.11 2 1 ASP H 27 ? ? -67.11 -146.29 3 1 SER H 28 ? ? 49.69 -163.60 4 1 VAL H 29 ? ? 82.77 119.44 5 1 SER H 31 ? ? 166.08 -175.03 6 1 ASN H 43 ? ? 86.08 -0.64 7 1 LEU H 63 ? ? -132.19 -91.10 8 1 LYS H 64 ? ? 64.79 -52.87 9 1 SER H 87 ? ? -42.42 -17.53 10 1 ALA H 91 ? ? -172.83 -176.56 11 1 ASP H 101 ? ? -120.19 -82.39 12 1 ILE H 130 ? ? 172.48 96.26 13 1 PRO H 135 ? ? -36.45 155.39 14 1 THR H 172 ? ? 65.44 -52.28 15 1 SER H 188 ? ? 173.84 150.14 16 1 SER H 198 ? ? 172.14 109.31 17 1 MET H 199 ? ? -26.77 -167.39 18 1 GLU H 200 ? ? 168.41 16.64 19 1 ALA H 201 ? ? 58.01 -28.63 20 1 LYS H 228 ? ? -68.15 -163.20 21 1 ALA H 230 ? ? 100.35 157.99 # loop_ _pdbx_validate_peptide_omega.id _pdbx_validate_peptide_omega.PDB_model_num _pdbx_validate_peptide_omega.auth_comp_id_1 _pdbx_validate_peptide_omega.auth_asym_id_1 _pdbx_validate_peptide_omega.auth_seq_id_1 _pdbx_validate_peptide_omega.PDB_ins_code_1 _pdbx_validate_peptide_omega.label_alt_id_1 _pdbx_validate_peptide_omega.auth_comp_id_2 _pdbx_validate_peptide_omega.auth_asym_id_2 _pdbx_validate_peptide_omega.auth_seq_id_2 _pdbx_validate_peptide_omega.PDB_ins_code_2 _pdbx_validate_peptide_omega.label_alt_id_2 _pdbx_validate_peptide_omega.omega 1 1 ALA H 133 ? ? SER H 134 ? ? 149.86 2 1 GLY H 222 ? ? THR H 223 ? ? 146.33 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 H GLU 1 ? A GLU 1 2 1 Y 1 H VAL 2 ? A VAL 2 3 1 Y 1 H GLN 3 ? A GLN 3 4 1 Y 1 H LEU 4 ? A LEU 4 5 1 Y 1 H GLN 5 ? A GLN 5 6 1 Y 1 H GLU 6 ? A GLU 6 7 1 Y 1 H SER 7 ? A SER 7 8 1 Y 1 H GLY 8 ? A GLY 8 9 1 Y 1 H PRO 9 ? A PRO 9 10 1 Y 1 H SER 10 ? A SER 10 11 1 Y 1 H LEU 11 ? A LEU 11 12 1 Y 1 H VAL 12 ? A VAL 12 13 1 Y 1 H LYS 13 ? A LYS 13 14 1 Y 1 H PRO 14 ? A PRO 14 15 1 Y 1 H SER 15 ? A SER 15 16 1 Y 1 H GLY 119 A A GLY 120 17 1 Y 1 H GLY 119 B A GLY 121 18 1 Y 1 H SER 119 C A SER 122 19 1 Y 1 H GLY 119 D A GLY 123 20 1 Y 1 H GLY 119 E A GLY 124 21 1 Y 1 H GLY 119 F A GLY 125 22 1 Y 1 H GLY 119 G A GLY 126 23 1 Y 1 H SER 119 H A SER 127 24 1 Y 1 H GLY 119 I A GLY 128 25 1 Y 1 H GLY 119 J A GLY 129 26 1 Y 1 H GLY 119 K A GLY 130 27 1 Y 1 H GLY 119 L A GLY 131 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 D-MALATE MLT 4 'NICKEL (II) ION' NI 5 water HOH #