data_4LBA # _entry.id 4LBA # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4LBA pdb_00004lba 10.2210/pdb4lba/pdb RCSB RCSB080414 ? ? WWPDB D_1000080414 ? ? # _pdbx_database_related.db_name TargetTrack _pdbx_database_related.db_id JCSG-417670 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 4LBA _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2013-06-20 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of a conjugative transposon lipoprotein (BACEGG_03088) from Bacteroides eggerthii DSM 20697 at 1.70 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 4LBA _cell.length_a 126.923 _cell.length_b 126.923 _cell.length_c 39.352 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 12 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4LBA _symmetry.Int_Tables_number 172 _symmetry.space_group_name_H-M 'P 64' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'conjugative transposon lipoprotein' 15957.280 2 ? ? ? ? 2 non-polymer syn 'PENTAETHYLENE GLYCOL' 238.278 2 ? ? ? ? 3 non-polymer syn 1,2-ETHANEDIOL 62.068 6 ? ? ? ? 4 water nat water 18.015 245 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GCDDD(MSE)DIQQSYPFTVEV(MSE)PVPNKVVKGQTVEIRCELKKEGDFSGTLYTIRYFQFEGEGSLK(MSE)DNGIT FLPNDRYLLENEKFRLYYTAAGDEAHNFIVVVEDNFSNSYELEFDFNNRNVKDDDLTIVPIGNFSPLLK ; _entity_poly.pdbx_seq_one_letter_code_can ;GCDDDMDIQQSYPFTVEVMPVPNKVVKGQTVEIRCELKKEGDFSGTLYTIRYFQFEGEGSLKMDNGITFLPNDRYLLENE KFRLYYTAAGDEAHNFIVVVEDNFSNSYELEFDFNNRNVKDDDLTIVPIGNFSPLLK ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier JCSG-417670 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 CYS n 1 3 ASP n 1 4 ASP n 1 5 ASP n 1 6 MSE n 1 7 ASP n 1 8 ILE n 1 9 GLN n 1 10 GLN n 1 11 SER n 1 12 TYR n 1 13 PRO n 1 14 PHE n 1 15 THR n 1 16 VAL n 1 17 GLU n 1 18 VAL n 1 19 MSE n 1 20 PRO n 1 21 VAL n 1 22 PRO n 1 23 ASN n 1 24 LYS n 1 25 VAL n 1 26 VAL n 1 27 LYS n 1 28 GLY n 1 29 GLN n 1 30 THR n 1 31 VAL n 1 32 GLU n 1 33 ILE n 1 34 ARG n 1 35 CYS n 1 36 GLU n 1 37 LEU n 1 38 LYS n 1 39 LYS n 1 40 GLU n 1 41 GLY n 1 42 ASP n 1 43 PHE n 1 44 SER n 1 45 GLY n 1 46 THR n 1 47 LEU n 1 48 TYR n 1 49 THR n 1 50 ILE n 1 51 ARG n 1 52 TYR n 1 53 PHE n 1 54 GLN n 1 55 PHE n 1 56 GLU n 1 57 GLY n 1 58 GLU n 1 59 GLY n 1 60 SER n 1 61 LEU n 1 62 LYS n 1 63 MSE n 1 64 ASP n 1 65 ASN n 1 66 GLY n 1 67 ILE n 1 68 THR n 1 69 PHE n 1 70 LEU n 1 71 PRO n 1 72 ASN n 1 73 ASP n 1 74 ARG n 1 75 TYR n 1 76 LEU n 1 77 LEU n 1 78 GLU n 1 79 ASN n 1 80 GLU n 1 81 LYS n 1 82 PHE n 1 83 ARG n 1 84 LEU n 1 85 TYR n 1 86 TYR n 1 87 THR n 1 88 ALA n 1 89 ALA n 1 90 GLY n 1 91 ASP n 1 92 GLU n 1 93 ALA n 1 94 HIS n 1 95 ASN n 1 96 PHE n 1 97 ILE n 1 98 VAL n 1 99 VAL n 1 100 VAL n 1 101 GLU n 1 102 ASP n 1 103 ASN n 1 104 PHE n 1 105 SER n 1 106 ASN n 1 107 SER n 1 108 TYR n 1 109 GLU n 1 110 LEU n 1 111 GLU n 1 112 PHE n 1 113 ASP n 1 114 PHE n 1 115 ASN n 1 116 ASN n 1 117 ARG n 1 118 ASN n 1 119 VAL n 1 120 LYS n 1 121 ASP n 1 122 ASP n 1 123 ASP n 1 124 LEU n 1 125 THR n 1 126 ILE n 1 127 VAL n 1 128 PRO n 1 129 ILE n 1 130 GLY n 1 131 ASN n 1 132 PHE n 1 133 SER n 1 134 PRO n 1 135 LEU n 1 136 LEU n 1 137 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'BACEGG_03088, ZP_03460274.1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'DSM 20697' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacteroides eggerthii' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 483216 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia Coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain PB1 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code B7AKX5_9BACE _struct_ref.pdbx_db_accession B7AKX5 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;CDDDMDIQQSYPFTVEVMPVPNKVVKGQTVEIRCELKKEGDFSGTLYTIRYFQFEGEGSLKMDNGITFLPNDRYLLENEK FRLYYTAAGDEAHNFIVVVEDNFSNSYELEFDFNNRNVKDDDLTIVPIGNFSPLLK ; _struct_ref.pdbx_align_begin 32 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4LBA A 2 ? 137 ? B7AKX5 32 ? 167 ? 32 167 2 1 4LBA B 2 ? 137 ? B7AKX5 32 ? 167 ? 32 167 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4LBA GLY A 1 ? UNP B7AKX5 ? ? 'expression tag' 0 1 2 4LBA GLY B 1 ? UNP B7AKX5 ? ? 'expression tag' 0 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 1PE non-polymer . 'PENTAETHYLENE GLYCOL' PEG400 'C10 H22 O6' 238.278 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 4LBA # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.87 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 57.10 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.pdbx_details '16.0% polyethylene glycol 3350, 0.2M magnesium chloride, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.pH ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.details 'Flat mirror (vertical focusing); single crystal Si(111) bent monochromator (horizontal focusing)' _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.pdbx_collection_date 2013-05-01 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'single crystal Si(111) bent' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.91837 1.0 2 0.97864 1.0 3 0.97817 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_wavelength_list '0.91837, 0.97864, 0.97817' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.limit_k_max ? _reflns.d_resolution_high 1.70 _reflns.observed_criterion_F_min ? _reflns.pdbx_netI_over_sigmaI 12.600 _reflns.observed_criterion_F_max ? _reflns.pdbx_Rmerge_I_obs ? _reflns.limit_l_max ? _reflns.limit_k_min ? _reflns.entry_id 4LBA _reflns.B_iso_Wilson_estimate ? _reflns.percent_possible_obs 99.800 _reflns.pdbx_Rsym_value 0.080 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.limit_l_min ? _reflns.limit_h_min ? _reflns.R_free_details ? _reflns.number_all 40202 _reflns.d_resolution_low 25.217 _reflns.pdbx_redundancy 6.200 _reflns.number_obs 40202 _reflns.limit_h_max ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.700 1.740 ? 17712 ? 0.828 0.9 0.828 ? 6.000 ? 2954 100.000 1 1 1.740 1.790 ? 18612 ? 0.635 1.2 0.635 ? 6.400 ? 2893 100.000 2 1 1.790 1.840 ? 18009 ? 0.496 1.6 0.496 ? 6.400 ? 2800 99.900 3 1 1.840 1.900 ? 16751 ? 0.366 2.1 0.366 ? 6.200 ? 2703 100.000 4 1 1.900 1.960 ? 15928 ? 0.267 2.8 0.267 ? 6.000 ? 2641 100.000 5 1 1.960 2.030 ? 13983 ? 0.206 3.5 0.206 ? 5.500 ? 2523 99.500 6 1 2.030 2.110 ? 14504 ? 0.169 4.4 0.169 ? 5.900 ? 2478 99.900 7 1 2.110 2.190 ? 15507 ? 0.143 5.2 0.143 ? 6.500 ? 2388 100.000 8 1 2.190 2.290 ? 14688 ? 0.122 6.1 0.122 ? 6.500 ? 2265 100.000 9 1 2.290 2.400 ? 13816 ? 0.110 6.5 0.110 ? 6.400 ? 2175 99.900 10 1 2.400 2.530 ? 12858 ? 0.094 7.5 0.094 ? 6.200 ? 2059 99.800 11 1 2.530 2.690 ? 10514 ? 0.078 8.9 0.078 ? 5.300 ? 1968 99.500 12 1 2.690 2.870 ? 12521 ? 0.071 9.4 0.071 ? 6.700 ? 1867 100.000 13 1 2.870 3.100 ? 11353 ? 0.064 9.5 0.064 ? 6.600 ? 1727 100.000 14 1 3.100 3.400 ? 10207 ? 0.060 9.2 0.060 ? 6.400 ? 1592 100.000 15 1 3.400 3.800 ? 8026 ? 0.057 8.6 0.057 ? 5.600 ? 1438 99.100 16 1 3.800 4.390 ? 7836 ? 0.059 8.8 0.059 ? 6.000 ? 1297 99.600 17 1 4.390 5.380 ? 6984 ? 0.058 9.7 0.058 ? 6.400 ? 1088 100.000 18 1 5.380 7.600 ? 4600 ? 0.066 7.5 0.066 ? 5.400 ? 857 99.900 19 1 7.600 25.217 ? 3113 ? 0.050 11.4 0.050 ? 6.400 ? 489 97.400 20 1 # _refine.ls_percent_reflns_R_free 5.0000 _refine.overall_SU_B 3.0600 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_R_Free_selection_details RANDOM _refine.overall_FOM_free_R_set ? _refine.pdbx_data_cutoff_low_absF ? _refine.entry_id 4LBA _refine.aniso_B[2][3] -0.0000 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_ML 0.0510 _refine.pdbx_ls_sigma_I ? _refine.aniso_B[1][3] -0.0000 _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.aniso_B[3][3] -0.2700 _refine.occupancy_max 1.000 _refine.ls_number_restraints ? _refine.aniso_B[1][1] 0.0800 _refine.pdbx_overall_ESU_R 0.0770 _refine.ls_R_factor_obs 0.1662 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_starting_model ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_method_to_determine_struct MAD _refine.solvent_model_param_ksol ? _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.correlation_coeff_Fo_to_Fc 0.9690 _refine.ls_number_reflns_R_free 2012 _refine.correlation_coeff_Fo_to_Fc_free 0.9620 _refine.pdbx_ls_sigma_F 0.000 _refine.ls_percent_reflns_obs 99.8000 _refine.ls_R_factor_R_work 0.1651 _refine.overall_SU_R_free ? _refine.ls_d_res_high 1.7000 _refine.pdbx_overall_ESU_R_Free 0.0770 _refine.B_iso_min 13.960 _refine.occupancy_min 0.230 _refine.B_iso_mean 36.8299 _refine.pdbx_stereochem_target_val_spec_case ? _refine.ls_R_factor_all ? _refine.aniso_B[2][2] 0.0800 _refine.B_iso_max 130.910 _refine.ls_d_res_low 25.217 _refine.pdbx_overall_phase_error ? _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.aniso_B[1][2] 0.0800 _refine.ls_R_factor_R_free 0.1873 _refine.ls_R_factor_R_free_error ? _refine.ls_number_reflns_obs 40187 _refine.overall_FOM_work_R_set ? _refine.ls_number_parameters ? _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. ATOM RECORDS CONTAIN SUM OF TLS AND RESIDUAL B FACTORS. 3. ANISOU RECORDS CONTAIN SUM OF TLS AND RESIDUAL U FACTORS. 4. WATERS WERE EXCLUDED FROM AUTOMATIC TLS ASSIGNMENT. 5. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 6. PEG3350 FRAGMENT (1PE) AND 1,2-ETHANEDIOL (EDO) MOLECULES FROM THE CRYSTALLIZATION/CRYOPROTECTION SOLUTION ARE MODELED. ; _refine.ls_number_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.solvent_model_param_bsol ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1763 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 53 _refine_hist.number_atoms_solvent 245 _refine_hist.number_atoms_total 2061 _refine_hist.d_res_high 1.7000 _refine_hist.d_res_low 25.217 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 1971 0.012 0.020 ? ? 'X-RAY DIFFRACTION' r_bond_other_d 1835 0.005 0.020 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 2666 1.573 1.985 ? ? 'X-RAY DIFFRACTION' r_angle_other_deg 4252 1.020 3.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 250 5.754 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 108 31.894 25.185 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 310 13.565 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 8 6.821 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 281 0.088 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 2256 0.008 0.020 ? ? 'X-RAY DIFFRACTION' r_gen_planes_other 472 0.005 0.020 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 907 4.151 3.971 ? ? 'X-RAY DIFFRACTION' r_mcbond_other 906 4.150 3.959 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 1140 6.637 7.338 ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 1.7000 _refine_ls_shell.d_res_low 1.7440 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 99.9300 _refine_ls_shell.number_reflns_R_work 2780 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2710 _refine_ls_shell.R_factor_R_free 0.3280 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 144 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 2924 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4LBA _struct.title 'Crystal structure of a conjugative transposon lipoprotein (BACEGG_03088) from Bacteroides eggerthii DSM 20697 at 1.70 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.pdbx_keywords 'STRUCTURAL GENOMICS, UNKNOWN FUNCTION' _struct_keywords.text ;PF12988 family protein, DUF3872, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-BIOLOGY, UNKNOWN FUNCTION ; _struct_keywords.entry_id 4LBA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 2 ? H N N 3 ? I N N 3 ? J N N 3 ? K N N 4 ? L N N 4 ? # _struct_biol.id 1 _struct_biol.details 'CRYSTAL PACKING ANALYSIS SUGGESTS THE ASSIGNMENT OF A MONOMER AS THE SIGNIFICANT OLIGOMERIZATION STATE.' # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A VAL 18 C ? ? ? 1_555 A MSE 19 N ? ? A VAL 48 A MSE 49 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale2 covale both ? A MSE 19 C ? ? ? 1_555 A PRO 20 N ? ? A MSE 49 A PRO 50 1_555 ? ? ? ? ? ? ? 1.342 ? ? covale3 covale both ? A LYS 62 C ? ? ? 1_555 A MSE 63 N ? ? A LYS 92 A MSE 93 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale4 covale both ? A MSE 63 C ? ? ? 1_555 A ASP 64 N ? ? A MSE 93 A ASP 94 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale5 covale both ? B VAL 18 C ? ? ? 1_555 B MSE 19 N ? ? B VAL 48 B MSE 49 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale6 covale both ? B MSE 19 C ? ? ? 1_555 B PRO 20 N ? ? B MSE 49 B PRO 50 1_555 ? ? ? ? ? ? ? 1.356 ? ? covale7 covale both ? B LYS 62 C ? ? ? 1_555 B MSE 63 N ? ? B LYS 92 B MSE 93 1_555 ? ? ? ? ? ? ? 1.316 ? ? covale8 covale both ? B MSE 63 C ? ? ? 1_555 B ASP 64 N ? ? B MSE 93 B ASP 94 1_555 ? ? ? ? ? ? ? 1.331 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 TYR 12 A . ? TYR 42 A PRO 13 A ? PRO 43 A 1 -4.52 2 TYR 12 B . ? TYR 42 B PRO 13 B ? PRO 43 B 1 -0.55 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? C ? 4 ? D ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 14 ? VAL A 18 ? PHE A 44 VAL A 48 A 2 THR A 30 ? LYS A 39 ? THR A 60 LYS A 69 A 3 LYS A 81 ? ALA A 88 ? LYS A 111 ALA A 118 A 4 GLY A 59 ? MSE A 63 ? GLY A 89 MSE A 93 B 1 TYR A 75 ? LEU A 76 ? TYR A 105 LEU A 106 B 2 TYR A 48 ? GLU A 56 ? TYR A 78 GLU A 86 B 3 HIS A 94 ? ASP A 102 ? HIS A 124 ASP A 132 B 4 SER A 107 ? PHE A 114 ? SER A 137 PHE A 144 C 1 PHE B 14 ? VAL B 18 ? PHE B 44 VAL B 48 C 2 THR B 30 ? LYS B 39 ? THR B 60 LYS B 69 C 3 LYS B 81 ? ALA B 88 ? LYS B 111 ALA B 118 C 4 GLY B 59 ? MSE B 63 ? GLY B 89 MSE B 93 D 1 TYR B 75 ? LEU B 77 ? TYR B 105 LEU B 107 D 2 TYR B 48 ? GLU B 56 ? TYR B 78 GLU B 86 D 3 HIS B 94 ? ASP B 102 ? HIS B 124 ASP B 132 D 4 SER B 107 ? PHE B 114 ? SER B 137 PHE B 144 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N THR A 15 ? N THR A 45 O LYS A 38 ? O LYS A 68 A 2 3 N ILE A 33 ? N ILE A 63 O LEU A 84 ? O LEU A 114 A 3 4 O THR A 87 ? O THR A 117 N SER A 60 ? N SER A 90 B 1 2 O TYR A 75 ? O TYR A 105 N ILE A 50 ? N ILE A 80 B 2 3 N ARG A 51 ? N ARG A 81 O VAL A 99 ? O VAL A 129 B 3 4 N VAL A 98 ? N VAL A 128 O LEU A 110 ? O LEU A 140 C 1 2 N THR B 15 ? N THR B 45 O LYS B 38 ? O LYS B 68 C 2 3 N ILE B 33 ? N ILE B 63 O LEU B 84 ? O LEU B 114 C 3 4 O THR B 87 ? O THR B 117 N SER B 60 ? N SER B 90 D 1 2 O LEU B 77 ? O LEU B 107 N TYR B 48 ? N TYR B 78 D 2 3 N ARG B 51 ? N ARG B 81 O VAL B 99 ? O VAL B 129 D 3 4 N PHE B 96 ? N PHE B 126 O PHE B 112 ? O PHE B 142 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A 1PE 201 ? 4 'BINDING SITE FOR RESIDUE 1PE A 201' AC2 Software A EDO 202 ? 2 'BINDING SITE FOR RESIDUE EDO A 202' AC3 Software A EDO 203 ? 4 'BINDING SITE FOR RESIDUE EDO A 203' AC4 Software A EDO 204 ? 3 'BINDING SITE FOR RESIDUE EDO A 204' AC5 Software B 1PE 201 ? 6 'BINDING SITE FOR RESIDUE 1PE B 201' AC6 Software B EDO 202 ? 5 'BINDING SITE FOR RESIDUE EDO B 202' AC7 Software B EDO 203 ? 9 'BINDING SITE FOR RESIDUE EDO B 203' AC8 Software B EDO 204 ? 4 'BINDING SITE FOR RESIDUE EDO B 204' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 PHE A 43 ? PHE A 73 . ? 1_556 ? 2 AC1 4 LYS A 62 ? LYS A 92 . ? 1_555 ? 3 AC1 4 GLY A 66 ? GLY A 96 . ? 1_555 ? 4 AC1 4 TYR A 85 ? TYR A 115 . ? 1_555 ? 5 AC2 2 TYR A 108 ? TYR A 138 . ? 1_555 ? 6 AC2 2 GLU A 109 ? GLU A 139 . ? 1_555 ? 7 AC3 4 PHE A 55 ? PHE A 85 . ? 1_555 ? 8 AC3 4 ILE A 97 ? ILE A 127 . ? 1_555 ? 9 AC3 4 HOH K . ? HOH A 320 . ? 1_555 ? 10 AC3 4 HOH K . ? HOH A 368 . ? 1_555 ? 11 AC4 3 GLU A 111 ? GLU A 141 . ? 1_555 ? 12 AC4 3 HOH K . ? HOH A 317 . ? 1_555 ? 13 AC4 3 HOH K . ? HOH A 392 . ? 1_555 ? 14 AC5 6 PHE B 43 ? PHE B 73 . ? 1_556 ? 15 AC5 6 LYS B 62 ? LYS B 92 . ? 1_555 ? 16 AC5 6 MSE B 63 ? MSE B 93 . ? 1_555 ? 17 AC5 6 GLY B 66 ? GLY B 96 . ? 1_555 ? 18 AC5 6 TYR B 85 ? TYR B 115 . ? 1_555 ? 19 AC5 6 THR B 87 ? THR B 117 . ? 1_555 ? 20 AC6 5 LYS B 39 ? LYS B 69 . ? 1_555 ? 21 AC6 5 THR B 46 ? THR B 76 . ? 1_555 ? 22 AC6 5 LEU B 77 ? LEU B 107 . ? 1_555 ? 23 AC6 5 GLU B 80 ? GLU B 110 . ? 1_555 ? 24 AC6 5 HOH L . ? HOH B 321 . ? 1_555 ? 25 AC7 9 PHE A 53 ? PHE A 83 . ? 1_555 ? 26 AC7 9 HOH K . ? HOH A 321 . ? 1_555 ? 27 AC7 9 PRO B 20 ? PRO B 50 . ? 1_555 ? 28 AC7 9 VAL B 21 ? VAL B 51 . ? 1_555 ? 29 AC7 9 PRO B 22 ? PRO B 52 . ? 1_555 ? 30 AC7 9 VAL B 31 ? VAL B 61 . ? 1_555 ? 31 AC7 9 GLU B 32 ? GLU B 62 . ? 1_555 ? 32 AC7 9 HOH L . ? HOH B 383 . ? 1_555 ? 33 AC7 9 HOH L . ? HOH B 385 . ? 1_555 ? 34 AC8 4 ASN B 95 ? ASN B 125 . ? 1_555 ? 35 AC8 4 GLU B 111 ? GLU B 141 . ? 1_555 ? 36 AC8 4 ASP B 113 ? ASP B 143 . ? 1_555 ? 37 AC8 4 HOH L . ? HOH B 388 . ? 1_555 ? # _atom_sites.entry_id 4LBA _atom_sites.fract_transf_matrix[1][1] 0.007879 _atom_sites.fract_transf_matrix[1][2] 0.004549 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009098 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.025412 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 CYS 2 32 ? ? ? A . n A 1 3 ASP 3 33 ? ? ? A . n A 1 4 ASP 4 34 ? ? ? A . n A 1 5 ASP 5 35 ? ? ? A . n A 1 6 MSE 6 36 ? ? ? A . n A 1 7 ASP 7 37 ? ? ? A . n A 1 8 ILE 8 38 ? ? ? A . n A 1 9 GLN 9 39 ? ? ? A . n A 1 10 GLN 10 40 ? ? ? A . n A 1 11 SER 11 41 41 SER SER A . n A 1 12 TYR 12 42 42 TYR TYR A . n A 1 13 PRO 13 43 43 PRO PRO A . n A 1 14 PHE 14 44 44 PHE PHE A . n A 1 15 THR 15 45 45 THR THR A . n A 1 16 VAL 16 46 46 VAL VAL A . n A 1 17 GLU 17 47 47 GLU GLU A . n A 1 18 VAL 18 48 48 VAL VAL A . n A 1 19 MSE 19 49 49 MSE MSE A . n A 1 20 PRO 20 50 50 PRO PRO A . n A 1 21 VAL 21 51 51 VAL VAL A . n A 1 22 PRO 22 52 52 PRO PRO A . n A 1 23 ASN 23 53 53 ASN ASN A . n A 1 24 LYS 24 54 54 LYS LYS A . n A 1 25 VAL 25 55 55 VAL VAL A . n A 1 26 VAL 26 56 56 VAL VAL A . n A 1 27 LYS 27 57 57 LYS LYS A . n A 1 28 GLY 28 58 58 GLY GLY A . n A 1 29 GLN 29 59 59 GLN GLN A . n A 1 30 THR 30 60 60 THR THR A . n A 1 31 VAL 31 61 61 VAL VAL A . n A 1 32 GLU 32 62 62 GLU GLU A . n A 1 33 ILE 33 63 63 ILE ILE A . n A 1 34 ARG 34 64 64 ARG ARG A . n A 1 35 CYS 35 65 65 CYS CYS A . n A 1 36 GLU 36 66 66 GLU GLU A . n A 1 37 LEU 37 67 67 LEU LEU A . n A 1 38 LYS 38 68 68 LYS LYS A . n A 1 39 LYS 39 69 69 LYS LYS A . n A 1 40 GLU 40 70 70 GLU GLU A . n A 1 41 GLY 41 71 71 GLY GLY A . n A 1 42 ASP 42 72 72 ASP ASP A . n A 1 43 PHE 43 73 73 PHE PHE A . n A 1 44 SER 44 74 74 SER SER A . n A 1 45 GLY 45 75 75 GLY GLY A . n A 1 46 THR 46 76 76 THR THR A . n A 1 47 LEU 47 77 77 LEU LEU A . n A 1 48 TYR 48 78 78 TYR TYR A . n A 1 49 THR 49 79 79 THR THR A . n A 1 50 ILE 50 80 80 ILE ILE A . n A 1 51 ARG 51 81 81 ARG ARG A . n A 1 52 TYR 52 82 82 TYR TYR A . n A 1 53 PHE 53 83 83 PHE PHE A . n A 1 54 GLN 54 84 84 GLN GLN A . n A 1 55 PHE 55 85 85 PHE PHE A . n A 1 56 GLU 56 86 86 GLU GLU A . n A 1 57 GLY 57 87 87 GLY GLY A . n A 1 58 GLU 58 88 88 GLU GLU A . n A 1 59 GLY 59 89 89 GLY GLY A . n A 1 60 SER 60 90 90 SER SER A . n A 1 61 LEU 61 91 91 LEU LEU A . n A 1 62 LYS 62 92 92 LYS LYS A . n A 1 63 MSE 63 93 93 MSE MSE A . n A 1 64 ASP 64 94 94 ASP ASP A . n A 1 65 ASN 65 95 95 ASN ASN A . n A 1 66 GLY 66 96 96 GLY GLY A . n A 1 67 ILE 67 97 97 ILE ILE A . n A 1 68 THR 68 98 98 THR THR A . n A 1 69 PHE 69 99 99 PHE PHE A . n A 1 70 LEU 70 100 100 LEU LEU A . n A 1 71 PRO 71 101 101 PRO PRO A . n A 1 72 ASN 72 102 102 ASN ASN A . n A 1 73 ASP 73 103 103 ASP ASP A . n A 1 74 ARG 74 104 104 ARG ARG A . n A 1 75 TYR 75 105 105 TYR TYR A . n A 1 76 LEU 76 106 106 LEU LEU A . n A 1 77 LEU 77 107 107 LEU LEU A . n A 1 78 GLU 78 108 108 GLU GLU A . n A 1 79 ASN 79 109 109 ASN ASN A . n A 1 80 GLU 80 110 110 GLU GLU A . n A 1 81 LYS 81 111 111 LYS LYS A . n A 1 82 PHE 82 112 112 PHE PHE A . n A 1 83 ARG 83 113 113 ARG ARG A . n A 1 84 LEU 84 114 114 LEU LEU A . n A 1 85 TYR 85 115 115 TYR TYR A . n A 1 86 TYR 86 116 116 TYR TYR A . n A 1 87 THR 87 117 117 THR THR A . n A 1 88 ALA 88 118 118 ALA ALA A . n A 1 89 ALA 89 119 119 ALA ALA A . n A 1 90 GLY 90 120 120 GLY GLY A . n A 1 91 ASP 91 121 121 ASP ASP A . n A 1 92 GLU 92 122 122 GLU GLU A . n A 1 93 ALA 93 123 123 ALA ALA A . n A 1 94 HIS 94 124 124 HIS HIS A . n A 1 95 ASN 95 125 125 ASN ASN A . n A 1 96 PHE 96 126 126 PHE PHE A . n A 1 97 ILE 97 127 127 ILE ILE A . n A 1 98 VAL 98 128 128 VAL VAL A . n A 1 99 VAL 99 129 129 VAL VAL A . n A 1 100 VAL 100 130 130 VAL VAL A . n A 1 101 GLU 101 131 131 GLU GLU A . n A 1 102 ASP 102 132 132 ASP ASP A . n A 1 103 ASN 103 133 133 ASN ASN A . n A 1 104 PHE 104 134 134 PHE PHE A . n A 1 105 SER 105 135 135 SER SER A . n A 1 106 ASN 106 136 136 ASN ASN A . n A 1 107 SER 107 137 137 SER SER A . n A 1 108 TYR 108 138 138 TYR TYR A . n A 1 109 GLU 109 139 139 GLU GLU A . n A 1 110 LEU 110 140 140 LEU LEU A . n A 1 111 GLU 111 141 141 GLU GLU A . n A 1 112 PHE 112 142 142 PHE PHE A . n A 1 113 ASP 113 143 143 ASP ASP A . n A 1 114 PHE 114 144 144 PHE PHE A . n A 1 115 ASN 115 145 145 ASN ASN A . n A 1 116 ASN 116 146 146 ASN ASN A . n A 1 117 ARG 117 147 ? ? ? A . n A 1 118 ASN 118 148 ? ? ? A . n A 1 119 VAL 119 149 ? ? ? A . n A 1 120 LYS 120 150 ? ? ? A . n A 1 121 ASP 121 151 ? ? ? A . n A 1 122 ASP 122 152 ? ? ? A . n A 1 123 ASP 123 153 ? ? ? A . n A 1 124 LEU 124 154 ? ? ? A . n A 1 125 THR 125 155 ? ? ? A . n A 1 126 ILE 126 156 ? ? ? A . n A 1 127 VAL 127 157 ? ? ? A . n A 1 128 PRO 128 158 ? ? ? A . n A 1 129 ILE 129 159 ? ? ? A . n A 1 130 GLY 130 160 ? ? ? A . n A 1 131 ASN 131 161 ? ? ? A . n A 1 132 PHE 132 162 ? ? ? A . n A 1 133 SER 133 163 ? ? ? A . n A 1 134 PRO 134 164 ? ? ? A . n A 1 135 LEU 135 165 ? ? ? A . n A 1 136 LEU 136 166 ? ? ? A . n A 1 137 LYS 137 167 ? ? ? A . n B 1 1 GLY 1 0 ? ? ? B . n B 1 2 CYS 2 32 ? ? ? B . n B 1 3 ASP 3 33 ? ? ? B . n B 1 4 ASP 4 34 ? ? ? B . n B 1 5 ASP 5 35 ? ? ? B . n B 1 6 MSE 6 36 ? ? ? B . n B 1 7 ASP 7 37 ? ? ? B . n B 1 8 ILE 8 38 38 ILE ILE B . n B 1 9 GLN 9 39 39 GLN GLN B . n B 1 10 GLN 10 40 40 GLN GLN B . n B 1 11 SER 11 41 41 SER SER B . n B 1 12 TYR 12 42 42 TYR TYR B . n B 1 13 PRO 13 43 43 PRO PRO B . n B 1 14 PHE 14 44 44 PHE PHE B . n B 1 15 THR 15 45 45 THR THR B . n B 1 16 VAL 16 46 46 VAL VAL B . n B 1 17 GLU 17 47 47 GLU GLU B . n B 1 18 VAL 18 48 48 VAL VAL B . n B 1 19 MSE 19 49 49 MSE MSE B . n B 1 20 PRO 20 50 50 PRO PRO B . n B 1 21 VAL 21 51 51 VAL VAL B . n B 1 22 PRO 22 52 52 PRO PRO B . n B 1 23 ASN 23 53 53 ASN ASN B . n B 1 24 LYS 24 54 54 LYS LYS B . n B 1 25 VAL 25 55 55 VAL VAL B . n B 1 26 VAL 26 56 56 VAL VAL B . n B 1 27 LYS 27 57 57 LYS LYS B . n B 1 28 GLY 28 58 58 GLY GLY B . n B 1 29 GLN 29 59 59 GLN GLN B . n B 1 30 THR 30 60 60 THR THR B . n B 1 31 VAL 31 61 61 VAL VAL B . n B 1 32 GLU 32 62 62 GLU GLU B . n B 1 33 ILE 33 63 63 ILE ILE B . n B 1 34 ARG 34 64 64 ARG ARG B . n B 1 35 CYS 35 65 65 CYS CYS B . n B 1 36 GLU 36 66 66 GLU GLU B . n B 1 37 LEU 37 67 67 LEU LEU B . n B 1 38 LYS 38 68 68 LYS LYS B . n B 1 39 LYS 39 69 69 LYS LYS B . n B 1 40 GLU 40 70 70 GLU GLU B . n B 1 41 GLY 41 71 71 GLY GLY B . n B 1 42 ASP 42 72 72 ASP ASP B . n B 1 43 PHE 43 73 73 PHE PHE B . n B 1 44 SER 44 74 74 SER SER B . n B 1 45 GLY 45 75 75 GLY GLY B . n B 1 46 THR 46 76 76 THR THR B . n B 1 47 LEU 47 77 77 LEU LEU B . n B 1 48 TYR 48 78 78 TYR TYR B . n B 1 49 THR 49 79 79 THR THR B . n B 1 50 ILE 50 80 80 ILE ILE B . n B 1 51 ARG 51 81 81 ARG ARG B . n B 1 52 TYR 52 82 82 TYR TYR B . n B 1 53 PHE 53 83 83 PHE PHE B . n B 1 54 GLN 54 84 84 GLN GLN B . n B 1 55 PHE 55 85 85 PHE PHE B . n B 1 56 GLU 56 86 86 GLU GLU B . n B 1 57 GLY 57 87 87 GLY GLY B . n B 1 58 GLU 58 88 88 GLU GLU B . n B 1 59 GLY 59 89 89 GLY GLY B . n B 1 60 SER 60 90 90 SER SER B . n B 1 61 LEU 61 91 91 LEU LEU B . n B 1 62 LYS 62 92 92 LYS LYS B . n B 1 63 MSE 63 93 93 MSE MSE B . n B 1 64 ASP 64 94 94 ASP ASP B . n B 1 65 ASN 65 95 95 ASN ASN B . n B 1 66 GLY 66 96 96 GLY GLY B . n B 1 67 ILE 67 97 97 ILE ILE B . n B 1 68 THR 68 98 98 THR THR B . n B 1 69 PHE 69 99 99 PHE PHE B . n B 1 70 LEU 70 100 100 LEU LEU B . n B 1 71 PRO 71 101 101 PRO PRO B . n B 1 72 ASN 72 102 102 ASN ASN B . n B 1 73 ASP 73 103 103 ASP ASP B . n B 1 74 ARG 74 104 104 ARG ARG B . n B 1 75 TYR 75 105 105 TYR TYR B . n B 1 76 LEU 76 106 106 LEU LEU B . n B 1 77 LEU 77 107 107 LEU LEU B . n B 1 78 GLU 78 108 108 GLU GLU B . n B 1 79 ASN 79 109 109 ASN ASN B . n B 1 80 GLU 80 110 110 GLU GLU B . n B 1 81 LYS 81 111 111 LYS LYS B . n B 1 82 PHE 82 112 112 PHE PHE B . n B 1 83 ARG 83 113 113 ARG ARG B . n B 1 84 LEU 84 114 114 LEU LEU B . n B 1 85 TYR 85 115 115 TYR TYR B . n B 1 86 TYR 86 116 116 TYR TYR B . n B 1 87 THR 87 117 117 THR THR B . n B 1 88 ALA 88 118 118 ALA ALA B . n B 1 89 ALA 89 119 119 ALA ALA B . n B 1 90 GLY 90 120 120 GLY GLY B . n B 1 91 ASP 91 121 121 ASP ASP B . n B 1 92 GLU 92 122 122 GLU GLU B . n B 1 93 ALA 93 123 123 ALA ALA B . n B 1 94 HIS 94 124 124 HIS HIS B . n B 1 95 ASN 95 125 125 ASN ASN B . n B 1 96 PHE 96 126 126 PHE PHE B . n B 1 97 ILE 97 127 127 ILE ILE B . n B 1 98 VAL 98 128 128 VAL VAL B . n B 1 99 VAL 99 129 129 VAL VAL B . n B 1 100 VAL 100 130 130 VAL VAL B . n B 1 101 GLU 101 131 131 GLU GLU B . n B 1 102 ASP 102 132 132 ASP ASP B . n B 1 103 ASN 103 133 133 ASN ASN B . n B 1 104 PHE 104 134 134 PHE PHE B . n B 1 105 SER 105 135 135 SER SER B . n B 1 106 ASN 106 136 136 ASN ASN B . n B 1 107 SER 107 137 137 SER SER B . n B 1 108 TYR 108 138 138 TYR TYR B . n B 1 109 GLU 109 139 139 GLU GLU B . n B 1 110 LEU 110 140 140 LEU LEU B . n B 1 111 GLU 111 141 141 GLU GLU B . n B 1 112 PHE 112 142 142 PHE PHE B . n B 1 113 ASP 113 143 143 ASP ASP B . n B 1 114 PHE 114 144 144 PHE PHE B . n B 1 115 ASN 115 145 145 ASN ASN B . n B 1 116 ASN 116 146 146 ASN ASN B . n B 1 117 ARG 117 147 ? ? ? B . n B 1 118 ASN 118 148 ? ? ? B . n B 1 119 VAL 119 149 ? ? ? B . n B 1 120 LYS 120 150 ? ? ? B . n B 1 121 ASP 121 151 ? ? ? B . n B 1 122 ASP 122 152 ? ? ? B . n B 1 123 ASP 123 153 ? ? ? B . n B 1 124 LEU 124 154 ? ? ? B . n B 1 125 THR 125 155 ? ? ? B . n B 1 126 ILE 126 156 ? ? ? B . n B 1 127 VAL 127 157 ? ? ? B . n B 1 128 PRO 128 158 ? ? ? B . n B 1 129 ILE 129 159 ? ? ? B . n B 1 130 GLY 130 160 ? ? ? B . n B 1 131 ASN 131 161 ? ? ? B . n B 1 132 PHE 132 162 ? ? ? B . n B 1 133 SER 133 163 ? ? ? B . n B 1 134 PRO 134 164 ? ? ? B . n B 1 135 LEU 135 165 ? ? ? B . n B 1 136 LEU 136 166 ? ? ? B . n B 1 137 LYS 137 167 ? ? ? B . n # _pdbx_SG_project.project_name PSI:Biology _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.initial_of_center JCSG _pdbx_SG_project.id 1 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 1PE 1 201 201 1PE 1PE A . D 3 EDO 1 202 202 EDO EDO A . E 3 EDO 1 203 204 EDO EDO A . F 3 EDO 1 204 207 EDO EDO A . G 2 1PE 1 201 200 1PE 1PE B . H 3 EDO 1 202 203 EDO EDO B . I 3 EDO 1 203 205 EDO EDO B . J 3 EDO 1 204 206 EDO EDO B . K 4 HOH 1 301 213 HOH HOH A . K 4 HOH 2 302 214 HOH HOH A . K 4 HOH 3 303 216 HOH HOH A . K 4 HOH 4 304 217 HOH HOH A . K 4 HOH 5 305 221 HOH HOH A . K 4 HOH 6 306 223 HOH HOH A . K 4 HOH 7 307 226 HOH HOH A . K 4 HOH 8 308 227 HOH HOH A . K 4 HOH 9 309 231 HOH HOH A . K 4 HOH 10 310 233 HOH HOH A . K 4 HOH 11 311 234 HOH HOH A . K 4 HOH 12 312 238 HOH HOH A . K 4 HOH 13 313 239 HOH HOH A . K 4 HOH 14 314 242 HOH HOH A . K 4 HOH 15 315 243 HOH HOH A . K 4 HOH 16 316 244 HOH HOH A . K 4 HOH 17 317 246 HOH HOH A . K 4 HOH 18 318 247 HOH HOH A . K 4 HOH 19 319 250 HOH HOH A . K 4 HOH 20 320 252 HOH HOH A . K 4 HOH 21 321 253 HOH HOH A . K 4 HOH 22 322 257 HOH HOH A . K 4 HOH 23 323 259 HOH HOH A . K 4 HOH 24 324 260 HOH HOH A . K 4 HOH 25 325 262 HOH HOH A . K 4 HOH 26 326 263 HOH HOH A . K 4 HOH 27 327 265 HOH HOH A . K 4 HOH 28 328 266 HOH HOH A . K 4 HOH 29 329 270 HOH HOH A . K 4 HOH 30 330 271 HOH HOH A . K 4 HOH 31 331 274 HOH HOH A . K 4 HOH 32 332 278 HOH HOH A . K 4 HOH 33 333 279 HOH HOH A . K 4 HOH 34 334 280 HOH HOH A . K 4 HOH 35 335 281 HOH HOH A . K 4 HOH 36 336 283 HOH HOH A . K 4 HOH 37 337 284 HOH HOH A . K 4 HOH 38 338 286 HOH HOH A . K 4 HOH 39 339 287 HOH HOH A . K 4 HOH 40 340 288 HOH HOH A . K 4 HOH 41 341 293 HOH HOH A . K 4 HOH 42 342 294 HOH HOH A . K 4 HOH 43 343 296 HOH HOH A . K 4 HOH 44 344 303 HOH HOH A . K 4 HOH 45 345 304 HOH HOH A . K 4 HOH 46 346 307 HOH HOH A . K 4 HOH 47 347 310 HOH HOH A . K 4 HOH 48 348 311 HOH HOH A . K 4 HOH 49 349 312 HOH HOH A . K 4 HOH 50 350 315 HOH HOH A . K 4 HOH 51 351 316 HOH HOH A . K 4 HOH 52 352 317 HOH HOH A . K 4 HOH 53 353 320 HOH HOH A . K 4 HOH 54 354 321 HOH HOH A . K 4 HOH 55 355 322 HOH HOH A . K 4 HOH 56 356 323 HOH HOH A . K 4 HOH 57 357 325 HOH HOH A . K 4 HOH 58 358 327 HOH HOH A . K 4 HOH 59 359 328 HOH HOH A . K 4 HOH 60 360 329 HOH HOH A . K 4 HOH 61 361 332 HOH HOH A . K 4 HOH 62 362 335 HOH HOH A . K 4 HOH 63 363 338 HOH HOH A . K 4 HOH 64 364 340 HOH HOH A . K 4 HOH 65 365 343 HOH HOH A . K 4 HOH 66 366 344 HOH HOH A . K 4 HOH 67 367 348 HOH HOH A . K 4 HOH 68 368 349 HOH HOH A . K 4 HOH 69 369 350 HOH HOH A . K 4 HOH 70 370 351 HOH HOH A . K 4 HOH 71 371 352 HOH HOH A . K 4 HOH 72 372 353 HOH HOH A . K 4 HOH 73 373 354 HOH HOH A . K 4 HOH 74 374 355 HOH HOH A . K 4 HOH 75 375 356 HOH HOH A . K 4 HOH 76 376 357 HOH HOH A . K 4 HOH 77 377 358 HOH HOH A . K 4 HOH 78 378 363 HOH HOH A . K 4 HOH 79 379 365 HOH HOH A . K 4 HOH 80 380 367 HOH HOH A . K 4 HOH 81 381 371 HOH HOH A . K 4 HOH 82 382 375 HOH HOH A . K 4 HOH 83 383 376 HOH HOH A . K 4 HOH 84 384 377 HOH HOH A . K 4 HOH 85 385 378 HOH HOH A . K 4 HOH 86 386 381 HOH HOH A . K 4 HOH 87 387 384 HOH HOH A . K 4 HOH 88 388 385 HOH HOH A . K 4 HOH 89 389 387 HOH HOH A . K 4 HOH 90 390 388 HOH HOH A . K 4 HOH 91 391 389 HOH HOH A . K 4 HOH 92 392 390 HOH HOH A . K 4 HOH 93 393 391 HOH HOH A . K 4 HOH 94 394 392 HOH HOH A . K 4 HOH 95 395 393 HOH HOH A . K 4 HOH 96 396 397 HOH HOH A . K 4 HOH 97 397 398 HOH HOH A . K 4 HOH 98 398 408 HOH HOH A . K 4 HOH 99 399 414 HOH HOH A . K 4 HOH 100 400 415 HOH HOH A . K 4 HOH 101 401 416 HOH HOH A . K 4 HOH 102 402 417 HOH HOH A . K 4 HOH 103 403 419 HOH HOH A . K 4 HOH 104 404 421 HOH HOH A . K 4 HOH 105 405 422 HOH HOH A . K 4 HOH 106 406 425 HOH HOH A . K 4 HOH 107 407 428 HOH HOH A . K 4 HOH 108 408 429 HOH HOH A . K 4 HOH 109 409 430 HOH HOH A . K 4 HOH 110 410 432 HOH HOH A . K 4 HOH 111 411 433 HOH HOH A . K 4 HOH 112 412 434 HOH HOH A . K 4 HOH 113 413 444 HOH HOH A . K 4 HOH 114 414 447 HOH HOH A . K 4 HOH 115 415 448 HOH HOH A . K 4 HOH 116 416 452 HOH HOH A . L 4 HOH 1 301 208 HOH HOH B . L 4 HOH 2 302 209 HOH HOH B . L 4 HOH 3 303 210 HOH HOH B . L 4 HOH 4 304 211 HOH HOH B . L 4 HOH 5 305 212 HOH HOH B . L 4 HOH 6 306 215 HOH HOH B . L 4 HOH 7 307 218 HOH HOH B . L 4 HOH 8 308 219 HOH HOH B . L 4 HOH 9 309 220 HOH HOH B . L 4 HOH 10 310 222 HOH HOH B . L 4 HOH 11 311 224 HOH HOH B . L 4 HOH 12 312 225 HOH HOH B . L 4 HOH 13 313 228 HOH HOH B . L 4 HOH 14 314 229 HOH HOH B . L 4 HOH 15 315 230 HOH HOH B . L 4 HOH 16 316 232 HOH HOH B . L 4 HOH 17 317 235 HOH HOH B . L 4 HOH 18 318 236 HOH HOH B . L 4 HOH 19 319 237 HOH HOH B . L 4 HOH 20 320 240 HOH HOH B . L 4 HOH 21 321 241 HOH HOH B . L 4 HOH 22 322 245 HOH HOH B . L 4 HOH 23 323 248 HOH HOH B . L 4 HOH 24 324 249 HOH HOH B . L 4 HOH 25 325 251 HOH HOH B . L 4 HOH 26 326 254 HOH HOH B . L 4 HOH 27 327 255 HOH HOH B . L 4 HOH 28 328 256 HOH HOH B . L 4 HOH 29 329 258 HOH HOH B . L 4 HOH 30 330 261 HOH HOH B . L 4 HOH 31 331 264 HOH HOH B . L 4 HOH 32 332 267 HOH HOH B . L 4 HOH 33 333 268 HOH HOH B . L 4 HOH 34 334 269 HOH HOH B . L 4 HOH 35 335 272 HOH HOH B . L 4 HOH 36 336 273 HOH HOH B . L 4 HOH 37 337 275 HOH HOH B . L 4 HOH 38 338 276 HOH HOH B . L 4 HOH 39 339 277 HOH HOH B . L 4 HOH 40 340 282 HOH HOH B . L 4 HOH 41 341 285 HOH HOH B . L 4 HOH 42 342 289 HOH HOH B . L 4 HOH 43 343 290 HOH HOH B . L 4 HOH 44 344 291 HOH HOH B . L 4 HOH 45 345 292 HOH HOH B . L 4 HOH 46 346 295 HOH HOH B . L 4 HOH 47 347 297 HOH HOH B . L 4 HOH 48 348 298 HOH HOH B . L 4 HOH 49 349 299 HOH HOH B . L 4 HOH 50 350 300 HOH HOH B . L 4 HOH 51 351 301 HOH HOH B . L 4 HOH 52 352 302 HOH HOH B . L 4 HOH 53 353 305 HOH HOH B . L 4 HOH 54 354 306 HOH HOH B . L 4 HOH 55 355 308 HOH HOH B . L 4 HOH 56 356 309 HOH HOH B . L 4 HOH 57 357 313 HOH HOH B . L 4 HOH 58 358 314 HOH HOH B . L 4 HOH 59 359 318 HOH HOH B . L 4 HOH 60 360 319 HOH HOH B . L 4 HOH 61 361 324 HOH HOH B . L 4 HOH 62 362 326 HOH HOH B . L 4 HOH 63 363 330 HOH HOH B . L 4 HOH 64 364 331 HOH HOH B . L 4 HOH 65 365 333 HOH HOH B . L 4 HOH 66 366 334 HOH HOH B . L 4 HOH 67 367 336 HOH HOH B . L 4 HOH 68 368 337 HOH HOH B . L 4 HOH 69 369 339 HOH HOH B . L 4 HOH 70 370 341 HOH HOH B . L 4 HOH 71 371 342 HOH HOH B . L 4 HOH 72 372 345 HOH HOH B . L 4 HOH 73 373 346 HOH HOH B . L 4 HOH 74 374 347 HOH HOH B . L 4 HOH 75 375 359 HOH HOH B . L 4 HOH 76 376 360 HOH HOH B . L 4 HOH 77 377 361 HOH HOH B . L 4 HOH 78 378 362 HOH HOH B . L 4 HOH 79 379 364 HOH HOH B . L 4 HOH 80 380 366 HOH HOH B . L 4 HOH 81 381 368 HOH HOH B . L 4 HOH 82 382 369 HOH HOH B . L 4 HOH 83 383 370 HOH HOH B . L 4 HOH 84 384 372 HOH HOH B . L 4 HOH 85 385 373 HOH HOH B . L 4 HOH 86 386 374 HOH HOH B . L 4 HOH 87 387 379 HOH HOH B . L 4 HOH 88 388 380 HOH HOH B . L 4 HOH 89 389 382 HOH HOH B . L 4 HOH 90 390 383 HOH HOH B . L 4 HOH 91 391 386 HOH HOH B . L 4 HOH 92 392 394 HOH HOH B . L 4 HOH 93 393 395 HOH HOH B . L 4 HOH 94 394 396 HOH HOH B . L 4 HOH 95 395 399 HOH HOH B . L 4 HOH 96 396 400 HOH HOH B . L 4 HOH 97 397 401 HOH HOH B . L 4 HOH 98 398 402 HOH HOH B . L 4 HOH 99 399 403 HOH HOH B . L 4 HOH 100 400 404 HOH HOH B . L 4 HOH 101 401 405 HOH HOH B . L 4 HOH 102 402 406 HOH HOH B . L 4 HOH 103 403 407 HOH HOH B . L 4 HOH 104 404 409 HOH HOH B . L 4 HOH 105 405 410 HOH HOH B . L 4 HOH 106 406 411 HOH HOH B . L 4 HOH 107 407 412 HOH HOH B . L 4 HOH 108 408 413 HOH HOH B . L 4 HOH 109 409 418 HOH HOH B . L 4 HOH 110 410 420 HOH HOH B . L 4 HOH 111 411 423 HOH HOH B . L 4 HOH 112 412 424 HOH HOH B . L 4 HOH 113 413 426 HOH HOH B . L 4 HOH 114 414 427 HOH HOH B . L 4 HOH 115 415 431 HOH HOH B . L 4 HOH 116 416 435 HOH HOH B . L 4 HOH 117 417 436 HOH HOH B . L 4 HOH 118 418 437 HOH HOH B . L 4 HOH 119 419 438 HOH HOH B . L 4 HOH 120 420 439 HOH HOH B . L 4 HOH 121 421 440 HOH HOH B . L 4 HOH 122 422 441 HOH HOH B . L 4 HOH 123 423 442 HOH HOH B . L 4 HOH 124 424 443 HOH HOH B . L 4 HOH 125 425 445 HOH HOH B . L 4 HOH 126 426 446 HOH HOH B . L 4 HOH 127 427 449 HOH HOH B . L 4 HOH 128 428 450 HOH HOH B . L 4 HOH 129 429 451 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 19 A MSE 49 ? MET SELENOMETHIONINE 2 A MSE 63 A MSE 93 ? MET SELENOMETHIONINE 3 B MSE 19 B MSE 49 ? MET SELENOMETHIONINE 4 B MSE 63 B MSE 93 ? MET SELENOMETHIONINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,E,F,K 2 1 B,G,H,I,J,L # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id B _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 316 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id L _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-08-07 2 'Structure model' 1 1 2017-11-15 3 'Structure model' 1 2 2018-01-24 4 'Structure model' 1 3 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Refinement description' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' software 2 3 'Structure model' citation_author 3 4 'Structure model' database_2 4 4 'Structure model' struct_conn 5 4 'Structure model' struct_ref_seq_dif 6 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_software.classification' 2 2 'Structure model' '_software.name' 3 3 'Structure model' '_citation_author.name' 4 4 'Structure model' '_database_2.pdbx_DOI' 5 4 'Structure model' '_database_2.pdbx_database_accession' 6 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 7 4 'Structure model' '_struct_ref_seq_dif.details' 8 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 9 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 10 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 85.1960 30.1440 32.4500 0.1526 0.0981 0.0724 -0.1139 -0.0123 -0.0149 3.1501 4.0274 0.6878 1.5949 0.8337 1.5082 -0.0280 -0.0365 0.0645 0.1254 0.0484 0.0961 0.1067 -0.0003 0.0206 'X-RAY DIFFRACTION' 2 ? refined 76.2880 5.1770 25.4300 0.0700 0.0541 0.0266 -0.0225 0.0099 -0.0195 1.9447 2.6255 0.5531 -0.2940 -0.0374 0.7587 -0.0677 0.1190 -0.0513 0.0707 0.0509 -0.1389 -0.0161 -0.0566 0.1020 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 41 A 146 ? . . . . ? 'X-RAY DIFFRACTION' 2 2 B 38 B 146 ? . . . . ? # _phasing.method MAD # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 2 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 SOLVE . ? program 'Tom Terwilliger' terwilliger@LANL.gov phasing http://www.solve.lanl.gov/ ? ? 4 SCALA 3.3.20 ? package 'Phil Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' ? ? ? 5 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 6 MOSFLM . ? ? ? ? 'data reduction' ? ? ? # _pdbx_entry_details.compound_details ? _pdbx_entry_details.sequence_details ;THIS CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY RESIDUES 32-167 OF THE TARGET SEQUENCE. ; _pdbx_entry_details.entry_id 4LBA _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 74 ? ? 60.53 154.56 2 1 ASN A 102 ? ? 76.57 -14.37 3 1 SER B 74 ? ? 59.57 156.71 4 1 ASN B 102 ? ? 72.87 -13.48 5 1 ASN B 145 ? ? 70.71 33.16 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 B ILE 38 ? CG1 ? B ILE 8 CG1 2 1 Y 1 B ILE 38 ? CG2 ? B ILE 8 CG2 3 1 Y 1 B ILE 38 ? CD1 ? B ILE 8 CD1 4 1 Y 1 B GLN 39 ? CG ? B GLN 9 CG 5 1 Y 1 B GLN 39 ? CD ? B GLN 9 CD 6 1 Y 1 B GLN 39 ? OE1 ? B GLN 9 OE1 7 1 Y 1 B GLN 39 ? NE2 ? B GLN 9 NE2 8 1 N 1 A 1PE 201 ? C16 ? C 1PE 1 C16 9 1 N 1 A 1PE 201 ? C26 ? C 1PE 1 C26 10 1 N 1 A 1PE 201 ? OH7 ? C 1PE 1 OH7 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A CYS 32 ? A CYS 2 3 1 Y 1 A ASP 33 ? A ASP 3 4 1 Y 1 A ASP 34 ? A ASP 4 5 1 Y 1 A ASP 35 ? A ASP 5 6 1 Y 1 A MSE 36 ? A MSE 6 7 1 Y 1 A ASP 37 ? A ASP 7 8 1 Y 1 A ILE 38 ? A ILE 8 9 1 Y 1 A GLN 39 ? A GLN 9 10 1 Y 1 A GLN 40 ? A GLN 10 11 1 Y 1 A ARG 147 ? A ARG 117 12 1 Y 1 A ASN 148 ? A ASN 118 13 1 Y 1 A VAL 149 ? A VAL 119 14 1 Y 1 A LYS 150 ? A LYS 120 15 1 Y 1 A ASP 151 ? A ASP 121 16 1 Y 1 A ASP 152 ? A ASP 122 17 1 Y 1 A ASP 153 ? A ASP 123 18 1 Y 1 A LEU 154 ? A LEU 124 19 1 Y 1 A THR 155 ? A THR 125 20 1 Y 1 A ILE 156 ? A ILE 126 21 1 Y 1 A VAL 157 ? A VAL 127 22 1 Y 1 A PRO 158 ? A PRO 128 23 1 Y 1 A ILE 159 ? A ILE 129 24 1 Y 1 A GLY 160 ? A GLY 130 25 1 Y 1 A ASN 161 ? A ASN 131 26 1 Y 1 A PHE 162 ? A PHE 132 27 1 Y 1 A SER 163 ? A SER 133 28 1 Y 1 A PRO 164 ? A PRO 134 29 1 Y 1 A LEU 165 ? A LEU 135 30 1 Y 1 A LEU 166 ? A LEU 136 31 1 Y 1 A LYS 167 ? A LYS 137 32 1 Y 1 B GLY 0 ? B GLY 1 33 1 Y 1 B CYS 32 ? B CYS 2 34 1 Y 1 B ASP 33 ? B ASP 3 35 1 Y 1 B ASP 34 ? B ASP 4 36 1 Y 1 B ASP 35 ? B ASP 5 37 1 Y 1 B MSE 36 ? B MSE 6 38 1 Y 1 B ASP 37 ? B ASP 7 39 1 Y 1 B ARG 147 ? B ARG 117 40 1 Y 1 B ASN 148 ? B ASN 118 41 1 Y 1 B VAL 149 ? B VAL 119 42 1 Y 1 B LYS 150 ? B LYS 120 43 1 Y 1 B ASP 151 ? B ASP 121 44 1 Y 1 B ASP 152 ? B ASP 122 45 1 Y 1 B ASP 153 ? B ASP 123 46 1 Y 1 B LEU 154 ? B LEU 124 47 1 Y 1 B THR 155 ? B THR 125 48 1 Y 1 B ILE 156 ? B ILE 126 49 1 Y 1 B VAL 157 ? B VAL 127 50 1 Y 1 B PRO 158 ? B PRO 128 51 1 Y 1 B ILE 159 ? B ILE 129 52 1 Y 1 B GLY 160 ? B GLY 130 53 1 Y 1 B ASN 161 ? B ASN 131 54 1 Y 1 B PHE 162 ? B PHE 132 55 1 Y 1 B SER 163 ? B SER 133 56 1 Y 1 B PRO 164 ? B PRO 134 57 1 Y 1 B LEU 165 ? B LEU 135 58 1 Y 1 B LEU 166 ? B LEU 136 59 1 Y 1 B LYS 167 ? B LYS 137 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'PENTAETHYLENE GLYCOL' 1PE 3 1,2-ETHANEDIOL EDO 4 water HOH #