data_4NHJ # _entry.id 4NHJ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4NHJ pdb_00004nhj 10.2210/pdb4nhj/pdb NDB NA2766 ? ? RCSB RCSB083210 ? ? WWPDB D_1000083210 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-07-16 2 'Structure model' 1 1 2014-08-13 3 'Structure model' 1 2 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4NHJ _pdbx_database_status.recvd_initial_deposition_date 2013-11-05 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 4NIC _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Li, Y.C.' 1 ? 'Hsiao, C.D.' 2 ? # _citation.id primary _citation.title 'Structural dynamics of the two-component response regulator RstA in recognition of promoter DNA element.' _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 42 _citation.page_first 8777 _citation.page_last 8788 _citation.year 2014 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24990372 _citation.pdbx_database_id_DOI 10.1093/nar/gku572 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Li, Y.C.' 1 ? primary 'Chang, C.K.' 2 ? primary 'Chang, C.F.' 3 ? primary 'Cheng, Y.H.' 4 ? primary 'Fang, P.J.' 5 ? primary 'Yu, T.' 6 ? primary 'Chen, S.C.' 7 ? primary 'Li, Y.C.' 8 ? primary 'Hsiao, C.D.' 9 ? primary 'Huang, T.H.' 10 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA-binding transcriptional regulator RstA' 13495.427 2 ? L153M,L168M 'UNP residues 131-239' ? 2 polymer syn "5'-D(*GP*GP*TP*TP*GP*TP*AP*CP*AP*TP*TP*CP*CP*GP*TP*TP*AP*CP*TP*CP*CP*CP*T)-3'" 6973.493 1 ? ? ? 'RstA box leading strand' 3 polymer syn "5'-D(*CP*AP*GP*GP*GP*AP*GP*TP*AP*AP*CP*GP*GP*AP*AP*TP*GP*TP*AP*CP*AP*AP*C)-3'" 7147.650 1 ? ? ? 'RstA box lagging strand' 4 water nat water 18.015 63 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'RstA protein' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MHHHHHHAMGTLTPHKTISFGSLTIDPVNRQVMLGGENVALSTADFDMLWELATHAGQIMDRDALLKNLRGVTYDGMDRS VDVAISRLRKKLLDNATEPYRIKTVRNKGYLFAPHAWDN ; ;MHHHHHHAMGTLTPHKTISFGSLTIDPVNRQVMLGGENVALSTADFDMLWELATHAGQIMDRDALLKNLRGVTYDGMDRS VDVAISRLRKKLLDNATEPYRIKTVRNKGYLFAPHAWDN ; A,B ? 2 polydeoxyribonucleotide no no ;(DG)(DG)(DT)(DT)(DG)(DT)(DA)(DC)(DA)(DT)(DT)(DC)(DC)(DG)(DT)(DT)(DA)(DC)(DT)(DC) (DC)(DC)(DT) ; GGTTGTACATTCCGTTACTCCCT C ? 3 polydeoxyribonucleotide no no ;(DC)(DA)(DG)(DG)(DG)(DA)(DG)(DT)(DA)(DA)(DC)(DG)(DG)(DA)(DA)(DT)(DG)(DT)(DA)(DC) (DA)(DA)(DC) ; CAGGGAGTAACGGAATGTACAAC D ? # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 HIS n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 ALA n 1 9 MET n 1 10 GLY n 1 11 THR n 1 12 LEU n 1 13 THR n 1 14 PRO n 1 15 HIS n 1 16 LYS n 1 17 THR n 1 18 ILE n 1 19 SER n 1 20 PHE n 1 21 GLY n 1 22 SER n 1 23 LEU n 1 24 THR n 1 25 ILE n 1 26 ASP n 1 27 PRO n 1 28 VAL n 1 29 ASN n 1 30 ARG n 1 31 GLN n 1 32 VAL n 1 33 MET n 1 34 LEU n 1 35 GLY n 1 36 GLY n 1 37 GLU n 1 38 ASN n 1 39 VAL n 1 40 ALA n 1 41 LEU n 1 42 SER n 1 43 THR n 1 44 ALA n 1 45 ASP n 1 46 PHE n 1 47 ASP n 1 48 MET n 1 49 LEU n 1 50 TRP n 1 51 GLU n 1 52 LEU n 1 53 ALA n 1 54 THR n 1 55 HIS n 1 56 ALA n 1 57 GLY n 1 58 GLN n 1 59 ILE n 1 60 MET n 1 61 ASP n 1 62 ARG n 1 63 ASP n 1 64 ALA n 1 65 LEU n 1 66 LEU n 1 67 LYS n 1 68 ASN n 1 69 LEU n 1 70 ARG n 1 71 GLY n 1 72 VAL n 1 73 THR n 1 74 TYR n 1 75 ASP n 1 76 GLY n 1 77 MET n 1 78 ASP n 1 79 ARG n 1 80 SER n 1 81 VAL n 1 82 ASP n 1 83 VAL n 1 84 ALA n 1 85 ILE n 1 86 SER n 1 87 ARG n 1 88 LEU n 1 89 ARG n 1 90 LYS n 1 91 LYS n 1 92 LEU n 1 93 LEU n 1 94 ASP n 1 95 ASN n 1 96 ALA n 1 97 THR n 1 98 GLU n 1 99 PRO n 1 100 TYR n 1 101 ARG n 1 102 ILE n 1 103 LYS n 1 104 THR n 1 105 VAL n 1 106 ARG n 1 107 ASN n 1 108 LYS n 1 109 GLY n 1 110 TYR n 1 111 LEU n 1 112 PHE n 1 113 ALA n 1 114 PRO n 1 115 HIS n 1 116 ALA n 1 117 TRP n 1 118 ASP n 1 119 ASN n 2 1 DG n 2 2 DG n 2 3 DT n 2 4 DT n 2 5 DG n 2 6 DT n 2 7 DA n 2 8 DC n 2 9 DA n 2 10 DT n 2 11 DT n 2 12 DC n 2 13 DC n 2 14 DG n 2 15 DT n 2 16 DT n 2 17 DA n 2 18 DC n 2 19 DT n 2 20 DC n 2 21 DC n 2 22 DC n 2 23 DT n 3 1 DC n 3 2 DA n 3 3 DG n 3 4 DG n 3 5 DG n 3 6 DA n 3 7 DG n 3 8 DT n 3 9 DA n 3 10 DA n 3 11 DC n 3 12 DG n 3 13 DG n 3 14 DA n 3 15 DA n 3 16 DT n 3 17 DG n 3 18 DT n 3 19 DA n 3 20 DC n 3 21 DA n 3 22 DA n 3 23 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'rstA, KPN2242_10390, KPR_2822' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Klebsiella pneumoniae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 573 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 121 ? ? ? A . n A 1 2 HIS 2 122 ? ? ? A . n A 1 3 HIS 3 123 ? ? ? A . n A 1 4 HIS 4 124 ? ? ? A . n A 1 5 HIS 5 125 ? ? ? A . n A 1 6 HIS 6 126 ? ? ? A . n A 1 7 HIS 7 127 ? ? ? A . n A 1 8 ALA 8 128 ? ? ? A . n A 1 9 MET 9 129 ? ? ? A . n A 1 10 GLY 10 130 ? ? ? A . n A 1 11 THR 11 131 ? ? ? A . n A 1 12 LEU 12 132 ? ? ? A . n A 1 13 THR 13 133 ? ? ? A . n A 1 14 PRO 14 134 134 PRO PRO A . n A 1 15 HIS 15 135 135 HIS HIS A . n A 1 16 LYS 16 136 136 LYS LYS A . n A 1 17 THR 17 137 137 THR THR A . n A 1 18 ILE 18 138 138 ILE ILE A . n A 1 19 SER 19 139 139 SER SER A . n A 1 20 PHE 20 140 140 PHE PHE A . n A 1 21 GLY 21 141 141 GLY GLY A . n A 1 22 SER 22 142 142 SER SER A . n A 1 23 LEU 23 143 143 LEU LEU A . n A 1 24 THR 24 144 144 THR THR A . n A 1 25 ILE 25 145 145 ILE ILE A . n A 1 26 ASP 26 146 146 ASP ASP A . n A 1 27 PRO 27 147 147 PRO PRO A . n A 1 28 VAL 28 148 148 VAL VAL A . n A 1 29 ASN 29 149 149 ASN ASN A . n A 1 30 ARG 30 150 150 ARG ARG A . n A 1 31 GLN 31 151 151 GLN GLN A . n A 1 32 VAL 32 152 152 VAL VAL A . n A 1 33 MET 33 153 153 MET MET A . n A 1 34 LEU 34 154 154 LEU LEU A . n A 1 35 GLY 35 155 155 GLY GLY A . n A 1 36 GLY 36 156 156 GLY GLY A . n A 1 37 GLU 37 157 157 GLU GLU A . n A 1 38 ASN 38 158 158 ASN ASN A . n A 1 39 VAL 39 159 159 VAL VAL A . n A 1 40 ALA 40 160 160 ALA ALA A . n A 1 41 LEU 41 161 161 LEU LEU A . n A 1 42 SER 42 162 162 SER SER A . n A 1 43 THR 43 163 163 THR THR A . n A 1 44 ALA 44 164 164 ALA ALA A . n A 1 45 ASP 45 165 165 ASP ASP A . n A 1 46 PHE 46 166 166 PHE PHE A . n A 1 47 ASP 47 167 167 ASP ASP A . n A 1 48 MET 48 168 168 MET MET A . n A 1 49 LEU 49 169 169 LEU LEU A . n A 1 50 TRP 50 170 170 TRP TRP A . n A 1 51 GLU 51 171 171 GLU GLU A . n A 1 52 LEU 52 172 172 LEU LEU A . n A 1 53 ALA 53 173 173 ALA ALA A . n A 1 54 THR 54 174 174 THR THR A . n A 1 55 HIS 55 175 175 HIS HIS A . n A 1 56 ALA 56 176 176 ALA ALA A . n A 1 57 GLY 57 177 177 GLY GLY A . n A 1 58 GLN 58 178 178 GLN GLN A . n A 1 59 ILE 59 179 179 ILE ILE A . n A 1 60 MET 60 180 180 MET MET A . n A 1 61 ASP 61 181 181 ASP ASP A . n A 1 62 ARG 62 182 182 ARG ARG A . n A 1 63 ASP 63 183 183 ASP ASP A . n A 1 64 ALA 64 184 184 ALA ALA A . n A 1 65 LEU 65 185 185 LEU LEU A . n A 1 66 LEU 66 186 186 LEU LEU A . n A 1 67 LYS 67 187 187 LYS LYS A . n A 1 68 ASN 68 188 188 ASN ASN A . n A 1 69 LEU 69 189 189 LEU LEU A . n A 1 70 ARG 70 190 190 ARG ARG A . n A 1 71 GLY 71 191 191 GLY GLY A . n A 1 72 VAL 72 192 192 VAL VAL A . n A 1 73 THR 73 193 193 THR THR A . n A 1 74 TYR 74 194 194 TYR TYR A . n A 1 75 ASP 75 195 195 ASP ASP A . n A 1 76 GLY 76 196 196 GLY GLY A . n A 1 77 MET 77 197 197 MET MET A . n A 1 78 ASP 78 198 198 ASP ASP A . n A 1 79 ARG 79 199 199 ARG ARG A . n A 1 80 SER 80 200 200 SER SER A . n A 1 81 VAL 81 201 201 VAL VAL A . n A 1 82 ASP 82 202 202 ASP ASP A . n A 1 83 VAL 83 203 203 VAL VAL A . n A 1 84 ALA 84 204 204 ALA ALA A . n A 1 85 ILE 85 205 205 ILE ILE A . n A 1 86 SER 86 206 206 SER SER A . n A 1 87 ARG 87 207 207 ARG ARG A . n A 1 88 LEU 88 208 208 LEU LEU A . n A 1 89 ARG 89 209 209 ARG ARG A . n A 1 90 LYS 90 210 210 LYS LYS A . n A 1 91 LYS 91 211 211 LYS LYS A . n A 1 92 LEU 92 212 212 LEU LEU A . n A 1 93 LEU 93 213 213 LEU LEU A . n A 1 94 ASP 94 214 214 ASP ASP A . n A 1 95 ASN 95 215 215 ASN ASN A . n A 1 96 ALA 96 216 216 ALA ALA A . n A 1 97 THR 97 217 217 THR THR A . n A 1 98 GLU 98 218 218 GLU GLU A . n A 1 99 PRO 99 219 219 PRO PRO A . n A 1 100 TYR 100 220 220 TYR TYR A . n A 1 101 ARG 101 221 221 ARG ARG A . n A 1 102 ILE 102 222 222 ILE ILE A . n A 1 103 LYS 103 223 223 LYS LYS A . n A 1 104 THR 104 224 224 THR THR A . n A 1 105 VAL 105 225 225 VAL VAL A . n A 1 106 ARG 106 226 226 ARG ARG A . n A 1 107 ASN 107 227 227 ASN ASN A . n A 1 108 LYS 108 228 228 LYS LYS A . n A 1 109 GLY 109 229 229 GLY GLY A . n A 1 110 TYR 110 230 230 TYR TYR A . n A 1 111 LEU 111 231 231 LEU LEU A . n A 1 112 PHE 112 232 232 PHE PHE A . n A 1 113 ALA 113 233 233 ALA ALA A . n A 1 114 PRO 114 234 234 PRO PRO A . n A 1 115 HIS 115 235 235 HIS HIS A . n A 1 116 ALA 116 236 ? ? ? A . n A 1 117 TRP 117 237 ? ? ? A . n A 1 118 ASP 118 238 ? ? ? A . n A 1 119 ASN 119 239 ? ? ? A . n B 1 1 MET 1 121 ? ? ? B . n B 1 2 HIS 2 122 ? ? ? B . n B 1 3 HIS 3 123 ? ? ? B . n B 1 4 HIS 4 124 ? ? ? B . n B 1 5 HIS 5 125 ? ? ? B . n B 1 6 HIS 6 126 ? ? ? B . n B 1 7 HIS 7 127 ? ? ? B . n B 1 8 ALA 8 128 ? ? ? B . n B 1 9 MET 9 129 ? ? ? B . n B 1 10 GLY 10 130 ? ? ? B . n B 1 11 THR 11 131 ? ? ? B . n B 1 12 LEU 12 132 ? ? ? B . n B 1 13 THR 13 133 ? ? ? B . n B 1 14 PRO 14 134 ? ? ? B . n B 1 15 HIS 15 135 135 HIS HIS B . n B 1 16 LYS 16 136 136 LYS LYS B . n B 1 17 THR 17 137 137 THR THR B . n B 1 18 ILE 18 138 138 ILE ILE B . n B 1 19 SER 19 139 139 SER SER B . n B 1 20 PHE 20 140 140 PHE PHE B . n B 1 21 GLY 21 141 141 GLY GLY B . n B 1 22 SER 22 142 142 SER SER B . n B 1 23 LEU 23 143 143 LEU LEU B . n B 1 24 THR 24 144 144 THR THR B . n B 1 25 ILE 25 145 145 ILE ILE B . n B 1 26 ASP 26 146 146 ASP ASP B . n B 1 27 PRO 27 147 147 PRO PRO B . n B 1 28 VAL 28 148 148 VAL VAL B . n B 1 29 ASN 29 149 149 ASN ASN B . n B 1 30 ARG 30 150 150 ARG ARG B . n B 1 31 GLN 31 151 151 GLN GLN B . n B 1 32 VAL 32 152 152 VAL VAL B . n B 1 33 MET 33 153 153 MET MET B . n B 1 34 LEU 34 154 154 LEU LEU B . n B 1 35 GLY 35 155 155 GLY GLY B . n B 1 36 GLY 36 156 156 GLY GLY B . n B 1 37 GLU 37 157 157 GLU GLU B . n B 1 38 ASN 38 158 158 ASN ASN B . n B 1 39 VAL 39 159 159 VAL VAL B . n B 1 40 ALA 40 160 160 ALA ALA B . n B 1 41 LEU 41 161 161 LEU LEU B . n B 1 42 SER 42 162 162 SER SER B . n B 1 43 THR 43 163 163 THR THR B . n B 1 44 ALA 44 164 164 ALA ALA B . n B 1 45 ASP 45 165 165 ASP ASP B . n B 1 46 PHE 46 166 166 PHE PHE B . n B 1 47 ASP 47 167 167 ASP ASP B . n B 1 48 MET 48 168 168 MET MET B . n B 1 49 LEU 49 169 169 LEU LEU B . n B 1 50 TRP 50 170 170 TRP TRP B . n B 1 51 GLU 51 171 171 GLU GLU B . n B 1 52 LEU 52 172 172 LEU LEU B . n B 1 53 ALA 53 173 173 ALA ALA B . n B 1 54 THR 54 174 174 THR THR B . n B 1 55 HIS 55 175 175 HIS HIS B . n B 1 56 ALA 56 176 176 ALA ALA B . n B 1 57 GLY 57 177 177 GLY GLY B . n B 1 58 GLN 58 178 178 GLN GLN B . n B 1 59 ILE 59 179 179 ILE ILE B . n B 1 60 MET 60 180 180 MET MET B . n B 1 61 ASP 61 181 181 ASP ASP B . n B 1 62 ARG 62 182 182 ARG ARG B . n B 1 63 ASP 63 183 183 ASP ASP B . n B 1 64 ALA 64 184 184 ALA ALA B . n B 1 65 LEU 65 185 185 LEU LEU B . n B 1 66 LEU 66 186 186 LEU LEU B . n B 1 67 LYS 67 187 187 LYS LYS B . n B 1 68 ASN 68 188 188 ASN ASN B . n B 1 69 LEU 69 189 189 LEU LEU B . n B 1 70 ARG 70 190 190 ARG ARG B . n B 1 71 GLY 71 191 191 GLY GLY B . n B 1 72 VAL 72 192 192 VAL VAL B . n B 1 73 THR 73 193 193 THR THR B . n B 1 74 TYR 74 194 194 TYR TYR B . n B 1 75 ASP 75 195 195 ASP ASP B . n B 1 76 GLY 76 196 196 GLY GLY B . n B 1 77 MET 77 197 197 MET MET B . n B 1 78 ASP 78 198 198 ASP ASP B . n B 1 79 ARG 79 199 199 ARG ARG B . n B 1 80 SER 80 200 200 SER SER B . n B 1 81 VAL 81 201 201 VAL VAL B . n B 1 82 ASP 82 202 202 ASP ASP B . n B 1 83 VAL 83 203 203 VAL VAL B . n B 1 84 ALA 84 204 204 ALA ALA B . n B 1 85 ILE 85 205 205 ILE ILE B . n B 1 86 SER 86 206 206 SER SER B . n B 1 87 ARG 87 207 207 ARG ARG B . n B 1 88 LEU 88 208 208 LEU LEU B . n B 1 89 ARG 89 209 209 ARG ARG B . n B 1 90 LYS 90 210 210 LYS LYS B . n B 1 91 LYS 91 211 211 LYS LYS B . n B 1 92 LEU 92 212 212 LEU LEU B . n B 1 93 LEU 93 213 213 LEU LEU B . n B 1 94 ASP 94 214 214 ASP ASP B . n B 1 95 ASN 95 215 215 ASN ASN B . n B 1 96 ALA 96 216 216 ALA ALA B . n B 1 97 THR 97 217 217 THR THR B . n B 1 98 GLU 98 218 218 GLU GLU B . n B 1 99 PRO 99 219 219 PRO PRO B . n B 1 100 TYR 100 220 220 TYR TYR B . n B 1 101 ARG 101 221 221 ARG ARG B . n B 1 102 ILE 102 222 222 ILE ILE B . n B 1 103 LYS 103 223 223 LYS LYS B . n B 1 104 THR 104 224 224 THR THR B . n B 1 105 VAL 105 225 225 VAL VAL B . n B 1 106 ARG 106 226 226 ARG ARG B . n B 1 107 ASN 107 227 227 ASN ASN B . n B 1 108 LYS 108 228 228 LYS LYS B . n B 1 109 GLY 109 229 229 GLY GLY B . n B 1 110 TYR 110 230 230 TYR TYR B . n B 1 111 LEU 111 231 231 LEU LEU B . n B 1 112 PHE 112 232 232 PHE PHE B . n B 1 113 ALA 113 233 233 ALA ALA B . n B 1 114 PRO 114 234 234 PRO PRO B . n B 1 115 HIS 115 235 235 HIS HIS B . n B 1 116 ALA 116 236 ? ? ? B . n B 1 117 TRP 117 237 ? ? ? B . n B 1 118 ASP 118 238 ? ? ? B . n B 1 119 ASN 119 239 ? ? ? B . n C 2 1 DG 1 1 ? ? ? C . n C 2 2 DG 2 2 2 DG DG C . n C 2 3 DT 3 3 3 DT DT C . n C 2 4 DT 4 4 4 DT DT C . n C 2 5 DG 5 5 5 DG DG C . n C 2 6 DT 6 6 6 DT DT C . n C 2 7 DA 7 7 7 DA DA C . n C 2 8 DC 8 8 8 DC DC C . n C 2 9 DA 9 9 9 DA DA C . n C 2 10 DT 10 10 10 DT DT C . n C 2 11 DT 11 11 11 DT DT C . n C 2 12 DC 12 12 12 DC DC C . n C 2 13 DC 13 13 13 DC DC C . n C 2 14 DG 14 14 14 DG DG C . n C 2 15 DT 15 15 15 DT DT C . n C 2 16 DT 16 16 16 DT DT C . n C 2 17 DA 17 17 17 DA DA C . n C 2 18 DC 18 18 18 DC DC C . n C 2 19 DT 19 19 19 DT DT C . n C 2 20 DC 20 20 20 DC DC C . n C 2 21 DC 21 21 21 DC DC C . n C 2 22 DC 22 22 22 DC DC C . n C 2 23 DT 23 23 23 DT DT C . n D 3 1 DC 1 1 1 DC DC D . n D 3 2 DA 2 2 2 DA DA D . n D 3 3 DG 3 3 3 DG DG D . n D 3 4 DG 4 4 4 DG DG D . n D 3 5 DG 5 5 5 DG DG D . n D 3 6 DA 6 6 6 DA DA D . n D 3 7 DG 7 7 7 DG DG D . n D 3 8 DT 8 8 8 DT DT D . n D 3 9 DA 9 9 9 DA DA D . n D 3 10 DA 10 10 10 DA DA D . n D 3 11 DC 11 11 11 DC DC D . n D 3 12 DG 12 12 12 DG DG D . n D 3 13 DG 13 13 13 DG DG D . n D 3 14 DA 14 14 14 DA DA D . n D 3 15 DA 15 15 15 DA DA D . n D 3 16 DT 16 16 16 DT DT D . n D 3 17 DG 17 17 17 DG DG D . n D 3 18 DT 18 18 18 DT DT D . n D 3 19 DA 19 19 19 DA DA D . n D 3 20 DC 20 20 20 DC DC D . n D 3 21 DA 21 21 21 DA DA D . n D 3 22 DA 22 22 22 DA DA D . n D 3 23 DC 23 23 23 DC DC D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 HOH 1 301 2 HOH HOH A . E 4 HOH 2 302 4 HOH HOH A . E 4 HOH 3 303 5 HOH HOH A . E 4 HOH 4 304 7 HOH HOH A . E 4 HOH 5 305 14 HOH HOH A . E 4 HOH 6 306 15 HOH HOH A . E 4 HOH 7 307 16 HOH HOH A . E 4 HOH 8 308 18 HOH HOH A . E 4 HOH 9 309 28 HOH HOH A . E 4 HOH 10 310 33 HOH HOH A . E 4 HOH 11 311 37 HOH HOH A . E 4 HOH 12 312 41 HOH HOH A . E 4 HOH 13 313 42 HOH HOH A . E 4 HOH 14 314 47 HOH HOH A . E 4 HOH 15 315 49 HOH HOH A . E 4 HOH 16 316 56 HOH HOH A . E 4 HOH 17 317 57 HOH HOH A . E 4 HOH 18 318 58 HOH HOH A . F 4 HOH 1 301 1 HOH HOH B . F 4 HOH 2 302 17 HOH HOH B . F 4 HOH 3 303 21 HOH HOH B . F 4 HOH 4 304 24 HOH HOH B . F 4 HOH 5 305 29 HOH HOH B . F 4 HOH 6 306 31 HOH HOH B . F 4 HOH 7 307 34 HOH HOH B . F 4 HOH 8 308 38 HOH HOH B . F 4 HOH 9 309 39 HOH HOH B . F 4 HOH 10 310 40 HOH HOH B . F 4 HOH 11 311 44 HOH HOH B . F 4 HOH 12 312 45 HOH HOH B . F 4 HOH 13 313 48 HOH HOH B . F 4 HOH 14 314 50 HOH HOH B . F 4 HOH 15 315 52 HOH HOH B . F 4 HOH 16 316 53 HOH HOH B . F 4 HOH 17 317 55 HOH HOH B . F 4 HOH 18 318 60 HOH HOH B . F 4 HOH 19 319 62 HOH HOH B . G 4 HOH 1 101 3 HOH HOH C . G 4 HOH 2 102 6 HOH HOH C . G 4 HOH 3 103 10 HOH HOH C . G 4 HOH 4 104 12 HOH HOH C . G 4 HOH 5 105 13 HOH HOH C . G 4 HOH 6 106 19 HOH HOH C . G 4 HOH 7 107 23 HOH HOH C . G 4 HOH 8 108 25 HOH HOH C . G 4 HOH 9 109 26 HOH HOH C . G 4 HOH 10 110 46 HOH HOH C . G 4 HOH 11 111 51 HOH HOH C . G 4 HOH 12 112 59 HOH HOH C . G 4 HOH 13 113 63 HOH HOH C . H 4 HOH 1 101 8 HOH HOH D . H 4 HOH 2 102 9 HOH HOH D . H 4 HOH 3 103 11 HOH HOH D . H 4 HOH 4 104 20 HOH HOH D . H 4 HOH 5 105 22 HOH HOH D . H 4 HOH 6 106 27 HOH HOH D . H 4 HOH 7 107 30 HOH HOH D . H 4 HOH 8 108 32 HOH HOH D . H 4 HOH 9 109 35 HOH HOH D . H 4 HOH 10 110 36 HOH HOH D . H 4 HOH 11 111 43 HOH HOH D . H 4 HOH 12 112 54 HOH HOH D . H 4 HOH 13 113 61 HOH HOH D . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 SOLVE phasing . ? 2 PHENIX refinement '(phenix.refine: 1.7.3_928)' ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # _cell.entry_id 4NHJ _cell.length_a 159.935 _cell.length_b 33.313 _cell.length_c 72.779 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4NHJ _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? # _exptl.entry_id 4NHJ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.36 _exptl_crystal.density_percent_sol 47.84 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 299 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.5 _exptl_crystal_grow.pdbx_details '100 mM Bis-Tris, 28% PEG400, 1.32 M sodium formate, pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 299K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2012-03-06 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'LN2-cooled, fixed-exit double crystal Si(111)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.96357 1.0 2 0.97879 1.0 3 0.97862 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSRRC BEAMLINE BL13B1' _diffrn_source.pdbx_synchrotron_site NSRRC _diffrn_source.pdbx_synchrotron_beamline BL13B1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list '0.96357, 0.97879, 0.97862' # _reflns.entry_id 4NHJ _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 50 _reflns.d_resolution_high 2.7 _reflns.number_obs 10418 _reflns.number_all 11334 _reflns.percent_possible_obs 91.9 _reflns.pdbx_Rmerge_I_obs 0.066 _reflns.pdbx_Rsym_value 0.066 _reflns.pdbx_netI_over_sigmaI 60.32 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 10.2 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.70 _reflns_shell.d_res_low 2.75 _reflns_shell.percent_possible_all 82.9 _reflns_shell.Rmerge_I_obs 0.27 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 7.2 _reflns_shell.pdbx_redundancy 10.0 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4NHJ _refine.ls_number_reflns_obs 10378 _refine.ls_number_reflns_all 10378 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.35 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 25.030 _refine.ls_d_res_high 2.701 _refine.ls_percent_reflns_obs 91.74 _refine.ls_R_factor_obs 0.2217 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2160 _refine.ls_R_factor_R_free 0.2713 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.01 _refine.ls_number_reflns_R_free 1039 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] 9.6820 _refine.aniso_B[2][2] 11.2600 _refine.aniso_B[3][3] -20.9421 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][3] 0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.321 _refine.solvent_model_param_bsol 41.452 _refine.pdbx_solvent_vdw_probe_radii 1.00 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.73 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.40 _refine.pdbx_overall_phase_error 30.50 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1601 _refine_hist.pdbx_number_atoms_nucleic_acid 918 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 63 _refine_hist.number_atoms_total 2582 _refine_hist.d_res_high 2.701 _refine_hist.d_res_low 25.030 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.004 ? ? 2656 ? 'X-RAY DIFFRACTION' f_angle_d 0.948 ? ? 3779 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 22.818 ? ? 1055 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.060 ? ? 430 ? 'X-RAY DIFFRACTION' f_plane_restr 0.003 ? ? 326 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 2.701 2.8435 1180 0.3334 84.0 0.3571 . . 131 . . . . 'X-RAY DIFFRACTION' . 2.8435 3.0214 1213 0.2836 84.0 0.3718 . . 135 . . . . 'X-RAY DIFFRACTION' . 3.0214 3.2542 1247 0.2485 88.0 0.3149 . . 139 . . . . 'X-RAY DIFFRACTION' . 3.2542 3.5809 1293 0.2464 91.0 0.3197 . . 144 . . . . 'X-RAY DIFFRACTION' . 3.5809 4.0971 1405 0.2183 95.0 0.2649 . . 156 . . . . 'X-RAY DIFFRACTION' . 4.0971 5.1545 1436 0.1858 98.0 0.2637 . . 159 . . . . 'X-RAY DIFFRACTION' . 5.1545 25.0309 1565 0.1900 100.0 0.2235 . . 175 . . . . 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 4NHJ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4NHJ _struct.title 'Crystal structure of Klebsiella pneumoniae RstA DNA-binding domain in complex with RstA box' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4NHJ _struct_keywords.pdbx_keywords 'TRANSCRIPTION REGULATOR/DNA' _struct_keywords.text 'Two-Component System, response regulator, TRANSCRIPTION REGULATOR-DNA complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP G0GNT0_KLEPN G0GNT0 1 ;TLTPHKTISFGSLTIDPVNRQVLLGGENVALSTADFDLLWELATHAGQIMDRDALLKNLRGVTYDGMDRSVDVAISRLRK KLLDNATEPYRIKTVRNKGYLFAPHAWDN ; 131 ? 2 PDB 4NHJ 4NHJ 2 GGTTGTACATTCCGTTACTCCCT 1 ? 3 PDB 4NHJ 4NHJ 3 CAGGGAGTAACGGAATGTACAAC 1 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4NHJ A 11 ? 119 ? G0GNT0 131 ? 239 ? 131 239 2 1 4NHJ B 11 ? 119 ? G0GNT0 131 ? 239 ? 131 239 3 2 4NHJ C 1 ? 23 ? 4NHJ 1 ? 23 ? 1 23 4 3 4NHJ D 1 ? 23 ? 4NHJ 1 ? 23 ? 1 23 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4NHJ MET A 1 ? UNP G0GNT0 ? ? 'expression tag' 121 1 1 4NHJ HIS A 2 ? UNP G0GNT0 ? ? 'expression tag' 122 2 1 4NHJ HIS A 3 ? UNP G0GNT0 ? ? 'expression tag' 123 3 1 4NHJ HIS A 4 ? UNP G0GNT0 ? ? 'expression tag' 124 4 1 4NHJ HIS A 5 ? UNP G0GNT0 ? ? 'expression tag' 125 5 1 4NHJ HIS A 6 ? UNP G0GNT0 ? ? 'expression tag' 126 6 1 4NHJ HIS A 7 ? UNP G0GNT0 ? ? 'expression tag' 127 7 1 4NHJ ALA A 8 ? UNP G0GNT0 ? ? 'expression tag' 128 8 1 4NHJ MET A 9 ? UNP G0GNT0 ? ? 'expression tag' 129 9 1 4NHJ GLY A 10 ? UNP G0GNT0 ? ? 'expression tag' 130 10 1 4NHJ MET A 33 ? UNP G0GNT0 LEU 153 'engineered mutation' 153 11 1 4NHJ MET A 48 ? UNP G0GNT0 LEU 168 'engineered mutation' 168 12 2 4NHJ MET B 1 ? UNP G0GNT0 ? ? 'expression tag' 121 13 2 4NHJ HIS B 2 ? UNP G0GNT0 ? ? 'expression tag' 122 14 2 4NHJ HIS B 3 ? UNP G0GNT0 ? ? 'expression tag' 123 15 2 4NHJ HIS B 4 ? UNP G0GNT0 ? ? 'expression tag' 124 16 2 4NHJ HIS B 5 ? UNP G0GNT0 ? ? 'expression tag' 125 17 2 4NHJ HIS B 6 ? UNP G0GNT0 ? ? 'expression tag' 126 18 2 4NHJ HIS B 7 ? UNP G0GNT0 ? ? 'expression tag' 127 19 2 4NHJ ALA B 8 ? UNP G0GNT0 ? ? 'expression tag' 128 20 2 4NHJ MET B 9 ? UNP G0GNT0 ? ? 'expression tag' 129 21 2 4NHJ GLY B 10 ? UNP G0GNT0 ? ? 'expression tag' 130 22 2 4NHJ MET B 33 ? UNP G0GNT0 LEU 153 'engineered mutation' 153 23 2 4NHJ MET B 48 ? UNP G0GNT0 LEU 168 'engineered mutation' 168 24 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 6230 ? 1 MORE -28 ? 1 'SSA (A^2)' 16590 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 42 ? THR A 54 ? SER A 162 THR A 174 1 ? 13 HELX_P HELX_P2 2 ARG A 62 ? ARG A 70 ? ARG A 182 ARG A 190 1 ? 9 HELX_P HELX_P3 3 ARG A 79 ? LEU A 92 ? ARG A 199 LEU A 212 1 ? 14 HELX_P HELX_P4 4 SER B 42 ? HIS B 55 ? SER B 162 HIS B 175 1 ? 14 HELX_P HELX_P5 5 ARG B 62 ? ARG B 70 ? ARG B 182 ARG B 190 1 ? 9 HELX_P HELX_P6 6 ARG B 79 ? LEU B 92 ? ARG B 199 LEU B 212 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? C DG 2 N1 ? ? ? 1_555 D DC 23 N3 ? ? C DG 2 D DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? C DG 2 N2 ? ? ? 1_555 D DC 23 O2 ? ? C DG 2 D DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? C DG 2 O6 ? ? ? 1_555 D DC 23 N4 ? ? C DG 2 D DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? C DT 3 N3 ? ? ? 1_555 D DA 22 N1 ? ? C DT 3 D DA 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? C DT 3 O4 ? ? ? 1_555 D DA 22 N6 ? ? C DT 3 D DA 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? C DT 4 N3 ? ? ? 1_555 D DA 21 N1 ? ? C DT 4 D DA 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? C DT 4 O4 ? ? ? 1_555 D DA 21 N6 ? ? C DT 4 D DA 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? C DG 5 N1 ? ? ? 1_555 D DC 20 N3 ? ? C DG 5 D DC 20 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog9 hydrog ? ? C DT 6 N3 ? ? ? 1_555 D DA 19 N1 ? ? C DT 6 D DA 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? C DT 6 O4 ? ? ? 1_555 D DA 19 N6 ? ? C DT 6 D DA 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? C DA 7 N1 ? ? ? 1_555 D DT 18 N3 ? ? C DA 7 D DT 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? C DA 7 N6 ? ? ? 1_555 D DT 18 O4 ? ? C DA 7 D DT 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? C DC 8 N3 ? ? ? 1_555 D DG 17 N1 ? ? C DC 8 D DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? C DC 8 N4 ? ? ? 1_555 D DG 17 O6 ? ? C DC 8 D DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? C DC 8 O2 ? ? ? 1_555 D DG 17 N2 ? ? C DC 8 D DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? C DA 9 N1 ? ? ? 1_555 D DT 16 N3 ? ? C DA 9 D DT 16 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog17 hydrog ? ? C DT 10 N3 ? ? ? 1_555 D DA 15 N1 ? ? C DT 10 D DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C DT 10 O4 ? ? ? 1_555 D DA 15 N6 ? ? C DT 10 D DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C DT 11 N3 ? ? ? 1_555 D DA 14 N1 ? ? C DT 11 D DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C DT 11 O4 ? ? ? 1_555 D DA 14 N6 ? ? C DT 11 D DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C DC 12 N3 ? ? ? 1_555 D DG 13 N1 ? ? C DC 12 D DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C DC 12 N4 ? ? ? 1_555 D DG 13 O6 ? ? C DC 12 D DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C DC 12 O2 ? ? ? 1_555 D DG 13 N2 ? ? C DC 12 D DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C DC 13 N3 ? ? ? 1_555 D DG 12 N1 ? ? C DC 13 D DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C DC 13 N4 ? ? ? 1_555 D DG 12 O6 ? ? C DC 13 D DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C DC 13 O2 ? ? ? 1_555 D DG 12 N2 ? ? C DC 13 D DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? C DG 14 N1 ? ? ? 1_555 D DC 11 N3 ? ? C DG 14 D DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? C DG 14 N2 ? ? ? 1_555 D DC 11 O2 ? ? C DG 14 D DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? C DG 14 O6 ? ? ? 1_555 D DC 11 N4 ? ? C DG 14 D DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? C DT 15 N3 ? ? ? 1_555 D DA 10 N1 ? ? C DT 15 D DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? C DT 15 O4 ? ? ? 1_555 D DA 10 N6 ? ? C DT 15 D DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C DT 16 N3 ? ? ? 1_555 D DA 9 N1 ? ? C DT 16 D DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? C DT 16 O4 ? ? ? 1_555 D DA 9 N6 ? ? C DT 16 D DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C DA 17 N1 ? ? ? 1_555 D DT 8 N3 ? ? C DA 17 D DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? C DA 17 N6 ? ? ? 1_555 D DT 8 O4 ? ? C DA 17 D DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? C DC 18 N3 ? ? ? 1_555 D DG 7 N1 ? ? C DC 18 D DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? C DC 18 N4 ? ? ? 1_555 D DG 7 O6 ? ? C DC 18 D DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? C DC 18 O2 ? ? ? 1_555 D DG 7 N2 ? ? C DC 18 D DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? C DT 19 N3 ? ? ? 1_555 D DA 6 N1 ? ? C DT 19 D DA 6 1_555 ? ? ? ? ? ? 'DT-DA PAIR' ? ? ? hydrog40 hydrog ? ? C DC 20 N3 ? ? ? 1_555 D DG 5 N1 ? ? C DC 20 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? C DC 20 N4 ? ? ? 1_555 D DG 5 O6 ? ? C DC 20 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? C DC 20 O2 ? ? ? 1_555 D DG 5 N2 ? ? C DC 20 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? C DC 21 N4 ? ? ? 1_555 D DG 3 O6 ? ? C DC 21 D DG 3 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog44 hydrog ? ? C DC 21 N3 ? ? ? 1_555 D DG 4 N1 ? ? C DC 21 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? C DC 21 N4 ? ? ? 1_555 D DG 4 O6 ? ? C DC 21 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? C DC 21 O2 ? ? ? 1_555 D DG 4 N2 ? ? C DC 21 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? C DC 22 N3 ? ? ? 1_555 D DG 3 N1 ? ? C DC 22 D DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? C DC 22 N4 ? ? ? 1_555 D DG 3 O6 ? ? C DC 22 D DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? C DC 22 O2 ? ? ? 1_555 D DG 3 N2 ? ? C DC 22 D DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? C DT 23 N3 ? ? ? 1_555 D DA 2 N1 ? ? C DT 23 D DA 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? C DT 23 O4 ? ? ? 1_555 D DA 2 N6 ? ? C DT 23 D DA 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLY 35 A . ? GLY 155 A GLY 36 A ? GLY 156 A 1 0.75 2 GLY 76 A . ? GLY 196 A MET 77 A ? MET 197 A 1 -1.21 3 ARG 70 B . ? ARG 190 B GLY 71 B ? GLY 191 B 1 -2.40 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 3 ? C ? 4 ? D ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 18 ? PHE A 20 ? ILE A 138 PHE A 140 A 2 LEU A 23 ? ASP A 26 ? LEU A 143 ASP A 146 A 3 GLN A 31 ? LEU A 34 ? GLN A 151 LEU A 154 A 4 GLU A 37 ? VAL A 39 ? GLU A 157 VAL A 159 B 1 MET A 60 ? ASP A 61 ? MET A 180 ASP A 181 B 2 GLY A 109 ? PHE A 112 ? GLY A 229 PHE A 232 B 3 ILE A 102 ? VAL A 105 ? ILE A 222 VAL A 225 C 1 ILE B 18 ? PHE B 20 ? ILE B 138 PHE B 140 C 2 LEU B 23 ? ASP B 26 ? LEU B 143 ASP B 146 C 3 GLN B 31 ? LEU B 34 ? GLN B 151 LEU B 154 C 4 GLU B 37 ? VAL B 39 ? GLU B 157 VAL B 159 D 1 ILE B 59 ? ASP B 61 ? ILE B 179 ASP B 181 D 2 GLY B 109 ? PHE B 112 ? GLY B 229 PHE B 232 D 3 ILE B 102 ? VAL B 105 ? ILE B 222 VAL B 225 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 18 ? N ILE A 138 O ILE A 25 ? O ILE A 145 A 2 3 N THR A 24 ? N THR A 144 O MET A 33 ? O MET A 153 A 3 4 N VAL A 32 ? N VAL A 152 O VAL A 39 ? O VAL A 159 B 1 2 N MET A 60 ? N MET A 180 O TYR A 110 ? O TYR A 230 B 2 3 O LEU A 111 ? O LEU A 231 N LYS A 103 ? N LYS A 223 C 1 2 N PHE B 20 ? N PHE B 140 O LEU B 23 ? O LEU B 143 C 2 3 N ASP B 26 ? N ASP B 146 O GLN B 31 ? O GLN B 151 C 3 4 N LEU B 34 ? N LEU B 154 O GLU B 37 ? O GLU B 157 D 1 2 N MET B 60 ? N MET B 180 O TYR B 110 ? O TYR B 230 D 2 3 O GLY B 109 ? O GLY B 229 N VAL B 105 ? N VAL B 225 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" C DC 8 ? ? "C1'" C DC 8 ? ? N1 C DC 8 ? ? 110.89 108.30 2.59 0.30 N 2 1 "C3'" C DC 13 ? ? "C2'" C DC 13 ? ? "C1'" C DC 13 ? ? 96.83 102.40 -5.57 0.80 N 3 1 "O4'" C DC 13 ? ? "C1'" C DC 13 ? ? N1 C DC 13 ? ? 110.38 108.30 2.08 0.30 N 4 1 "O4'" C DA 17 ? ? "C1'" C DA 17 ? ? N9 C DA 17 ? ? 110.13 108.30 1.83 0.30 N 5 1 "O4'" D DG 4 ? ? "C1'" D DG 4 ? ? N9 D DG 4 ? ? 110.12 108.30 1.82 0.30 N 6 1 "C3'" D DT 8 ? ? "C2'" D DT 8 ? ? "C1'" D DT 8 ? ? 97.28 102.40 -5.12 0.80 N 7 1 "O4'" D DG 12 ? ? "C1'" D DG 12 ? ? N9 D DG 12 ? ? 110.35 108.30 2.05 0.30 N 8 1 "O4'" D DC 20 ? ? "C1'" D DC 20 ? ? N1 D DC 20 ? ? 110.85 108.30 2.55 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 MET A 197 ? ? 69.57 -4.50 2 1 ASN A 227 ? ? 67.97 -11.34 3 1 LYS A 228 ? ? -96.51 -66.84 4 1 HIS B 175 ? ? -101.63 56.66 5 1 LEU B 213 ? ? 55.58 71.53 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 121 ? A MET 1 2 1 Y 1 A HIS 122 ? A HIS 2 3 1 Y 1 A HIS 123 ? A HIS 3 4 1 Y 1 A HIS 124 ? A HIS 4 5 1 Y 1 A HIS 125 ? A HIS 5 6 1 Y 1 A HIS 126 ? A HIS 6 7 1 Y 1 A HIS 127 ? A HIS 7 8 1 Y 1 A ALA 128 ? A ALA 8 9 1 Y 1 A MET 129 ? A MET 9 10 1 Y 1 A GLY 130 ? A GLY 10 11 1 Y 1 A THR 131 ? A THR 11 12 1 Y 1 A LEU 132 ? A LEU 12 13 1 Y 1 A THR 133 ? A THR 13 14 1 Y 1 A ALA 236 ? A ALA 116 15 1 Y 1 A TRP 237 ? A TRP 117 16 1 Y 1 A ASP 238 ? A ASP 118 17 1 Y 1 A ASN 239 ? A ASN 119 18 1 Y 1 B MET 121 ? B MET 1 19 1 Y 1 B HIS 122 ? B HIS 2 20 1 Y 1 B HIS 123 ? B HIS 3 21 1 Y 1 B HIS 124 ? B HIS 4 22 1 Y 1 B HIS 125 ? B HIS 5 23 1 Y 1 B HIS 126 ? B HIS 6 24 1 Y 1 B HIS 127 ? B HIS 7 25 1 Y 1 B ALA 128 ? B ALA 8 26 1 Y 1 B MET 129 ? B MET 9 27 1 Y 1 B GLY 130 ? B GLY 10 28 1 Y 1 B THR 131 ? B THR 11 29 1 Y 1 B LEU 132 ? B LEU 12 30 1 Y 1 B THR 133 ? B THR 13 31 1 Y 1 B PRO 134 ? B PRO 14 32 1 Y 1 B ALA 236 ? B ALA 116 33 1 Y 1 B TRP 237 ? B TRP 117 34 1 Y 1 B ASP 238 ? B ASP 118 35 1 Y 1 B ASN 239 ? B ASN 119 36 1 Y 1 C DG 1 ? C DG 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 DA OP3 O N N 74 DA P P N N 75 DA OP1 O N N 76 DA OP2 O N N 77 DA "O5'" O N N 78 DA "C5'" C N N 79 DA "C4'" C N R 80 DA "O4'" O N N 81 DA "C3'" C N S 82 DA "O3'" O N N 83 DA "C2'" C N N 84 DA "C1'" C N R 85 DA N9 N Y N 86 DA C8 C Y N 87 DA N7 N Y N 88 DA C5 C Y N 89 DA C6 C Y N 90 DA N6 N N N 91 DA N1 N Y N 92 DA C2 C Y N 93 DA N3 N Y N 94 DA C4 C Y N 95 DA HOP3 H N N 96 DA HOP2 H N N 97 DA "H5'" H N N 98 DA "H5''" H N N 99 DA "H4'" H N N 100 DA "H3'" H N N 101 DA "HO3'" H N N 102 DA "H2'" H N N 103 DA "H2''" H N N 104 DA "H1'" H N N 105 DA H8 H N N 106 DA H61 H N N 107 DA H62 H N N 108 DA H2 H N N 109 DC OP3 O N N 110 DC P P N N 111 DC OP1 O N N 112 DC OP2 O N N 113 DC "O5'" O N N 114 DC "C5'" C N N 115 DC "C4'" C N R 116 DC "O4'" O N N 117 DC "C3'" C N S 118 DC "O3'" O N N 119 DC "C2'" C N N 120 DC "C1'" C N R 121 DC N1 N N N 122 DC C2 C N N 123 DC O2 O N N 124 DC N3 N N N 125 DC C4 C N N 126 DC N4 N N N 127 DC C5 C N N 128 DC C6 C N N 129 DC HOP3 H N N 130 DC HOP2 H N N 131 DC "H5'" H N N 132 DC "H5''" H N N 133 DC "H4'" H N N 134 DC "H3'" H N N 135 DC "HO3'" H N N 136 DC "H2'" H N N 137 DC "H2''" H N N 138 DC "H1'" H N N 139 DC H41 H N N 140 DC H42 H N N 141 DC H5 H N N 142 DC H6 H N N 143 DG OP3 O N N 144 DG P P N N 145 DG OP1 O N N 146 DG OP2 O N N 147 DG "O5'" O N N 148 DG "C5'" C N N 149 DG "C4'" C N R 150 DG "O4'" O N N 151 DG "C3'" C N S 152 DG "O3'" O N N 153 DG "C2'" C N N 154 DG "C1'" C N R 155 DG N9 N Y N 156 DG C8 C Y N 157 DG N7 N Y N 158 DG C5 C Y N 159 DG C6 C N N 160 DG O6 O N N 161 DG N1 N N N 162 DG C2 C N N 163 DG N2 N N N 164 DG N3 N N N 165 DG C4 C Y N 166 DG HOP3 H N N 167 DG HOP2 H N N 168 DG "H5'" H N N 169 DG "H5''" H N N 170 DG "H4'" H N N 171 DG "H3'" H N N 172 DG "HO3'" H N N 173 DG "H2'" H N N 174 DG "H2''" H N N 175 DG "H1'" H N N 176 DG H8 H N N 177 DG H1 H N N 178 DG H21 H N N 179 DG H22 H N N 180 DT OP3 O N N 181 DT P P N N 182 DT OP1 O N N 183 DT OP2 O N N 184 DT "O5'" O N N 185 DT "C5'" C N N 186 DT "C4'" C N R 187 DT "O4'" O N N 188 DT "C3'" C N S 189 DT "O3'" O N N 190 DT "C2'" C N N 191 DT "C1'" C N R 192 DT N1 N N N 193 DT C2 C N N 194 DT O2 O N N 195 DT N3 N N N 196 DT C4 C N N 197 DT O4 O N N 198 DT C5 C N N 199 DT C7 C N N 200 DT C6 C N N 201 DT HOP3 H N N 202 DT HOP2 H N N 203 DT "H5'" H N N 204 DT "H5''" H N N 205 DT "H4'" H N N 206 DT "H3'" H N N 207 DT "HO3'" H N N 208 DT "H2'" H N N 209 DT "H2''" H N N 210 DT "H1'" H N N 211 DT H3 H N N 212 DT H71 H N N 213 DT H72 H N N 214 DT H73 H N N 215 DT H6 H N N 216 GLN N N N N 217 GLN CA C N S 218 GLN C C N N 219 GLN O O N N 220 GLN CB C N N 221 GLN CG C N N 222 GLN CD C N N 223 GLN OE1 O N N 224 GLN NE2 N N N 225 GLN OXT O N N 226 GLN H H N N 227 GLN H2 H N N 228 GLN HA H N N 229 GLN HB2 H N N 230 GLN HB3 H N N 231 GLN HG2 H N N 232 GLN HG3 H N N 233 GLN HE21 H N N 234 GLN HE22 H N N 235 GLN HXT H N N 236 GLU N N N N 237 GLU CA C N S 238 GLU C C N N 239 GLU O O N N 240 GLU CB C N N 241 GLU CG C N N 242 GLU CD C N N 243 GLU OE1 O N N 244 GLU OE2 O N N 245 GLU OXT O N N 246 GLU H H N N 247 GLU H2 H N N 248 GLU HA H N N 249 GLU HB2 H N N 250 GLU HB3 H N N 251 GLU HG2 H N N 252 GLU HG3 H N N 253 GLU HE2 H N N 254 GLU HXT H N N 255 GLY N N N N 256 GLY CA C N N 257 GLY C C N N 258 GLY O O N N 259 GLY OXT O N N 260 GLY H H N N 261 GLY H2 H N N 262 GLY HA2 H N N 263 GLY HA3 H N N 264 GLY HXT H N N 265 HIS N N N N 266 HIS CA C N S 267 HIS C C N N 268 HIS O O N N 269 HIS CB C N N 270 HIS CG C Y N 271 HIS ND1 N Y N 272 HIS CD2 C Y N 273 HIS CE1 C Y N 274 HIS NE2 N Y N 275 HIS OXT O N N 276 HIS H H N N 277 HIS H2 H N N 278 HIS HA H N N 279 HIS HB2 H N N 280 HIS HB3 H N N 281 HIS HD1 H N N 282 HIS HD2 H N N 283 HIS HE1 H N N 284 HIS HE2 H N N 285 HIS HXT H N N 286 HOH O O N N 287 HOH H1 H N N 288 HOH H2 H N N 289 ILE N N N N 290 ILE CA C N S 291 ILE C C N N 292 ILE O O N N 293 ILE CB C N S 294 ILE CG1 C N N 295 ILE CG2 C N N 296 ILE CD1 C N N 297 ILE OXT O N N 298 ILE H H N N 299 ILE H2 H N N 300 ILE HA H N N 301 ILE HB H N N 302 ILE HG12 H N N 303 ILE HG13 H N N 304 ILE HG21 H N N 305 ILE HG22 H N N 306 ILE HG23 H N N 307 ILE HD11 H N N 308 ILE HD12 H N N 309 ILE HD13 H N N 310 ILE HXT H N N 311 LEU N N N N 312 LEU CA C N S 313 LEU C C N N 314 LEU O O N N 315 LEU CB C N N 316 LEU CG C N N 317 LEU CD1 C N N 318 LEU CD2 C N N 319 LEU OXT O N N 320 LEU H H N N 321 LEU H2 H N N 322 LEU HA H N N 323 LEU HB2 H N N 324 LEU HB3 H N N 325 LEU HG H N N 326 LEU HD11 H N N 327 LEU HD12 H N N 328 LEU HD13 H N N 329 LEU HD21 H N N 330 LEU HD22 H N N 331 LEU HD23 H N N 332 LEU HXT H N N 333 LYS N N N N 334 LYS CA C N S 335 LYS C C N N 336 LYS O O N N 337 LYS CB C N N 338 LYS CG C N N 339 LYS CD C N N 340 LYS CE C N N 341 LYS NZ N N N 342 LYS OXT O N N 343 LYS H H N N 344 LYS H2 H N N 345 LYS HA H N N 346 LYS HB2 H N N 347 LYS HB3 H N N 348 LYS HG2 H N N 349 LYS HG3 H N N 350 LYS HD2 H N N 351 LYS HD3 H N N 352 LYS HE2 H N N 353 LYS HE3 H N N 354 LYS HZ1 H N N 355 LYS HZ2 H N N 356 LYS HZ3 H N N 357 LYS HXT H N N 358 MET N N N N 359 MET CA C N S 360 MET C C N N 361 MET O O N N 362 MET CB C N N 363 MET CG C N N 364 MET SD S N N 365 MET CE C N N 366 MET OXT O N N 367 MET H H N N 368 MET H2 H N N 369 MET HA H N N 370 MET HB2 H N N 371 MET HB3 H N N 372 MET HG2 H N N 373 MET HG3 H N N 374 MET HE1 H N N 375 MET HE2 H N N 376 MET HE3 H N N 377 MET HXT H N N 378 PHE N N N N 379 PHE CA C N S 380 PHE C C N N 381 PHE O O N N 382 PHE CB C N N 383 PHE CG C Y N 384 PHE CD1 C Y N 385 PHE CD2 C Y N 386 PHE CE1 C Y N 387 PHE CE2 C Y N 388 PHE CZ C Y N 389 PHE OXT O N N 390 PHE H H N N 391 PHE H2 H N N 392 PHE HA H N N 393 PHE HB2 H N N 394 PHE HB3 H N N 395 PHE HD1 H N N 396 PHE HD2 H N N 397 PHE HE1 H N N 398 PHE HE2 H N N 399 PHE HZ H N N 400 PHE HXT H N N 401 PRO N N N N 402 PRO CA C N S 403 PRO C C N N 404 PRO O O N N 405 PRO CB C N N 406 PRO CG C N N 407 PRO CD C N N 408 PRO OXT O N N 409 PRO H H N N 410 PRO HA H N N 411 PRO HB2 H N N 412 PRO HB3 H N N 413 PRO HG2 H N N 414 PRO HG3 H N N 415 PRO HD2 H N N 416 PRO HD3 H N N 417 PRO HXT H N N 418 SER N N N N 419 SER CA C N S 420 SER C C N N 421 SER O O N N 422 SER CB C N N 423 SER OG O N N 424 SER OXT O N N 425 SER H H N N 426 SER H2 H N N 427 SER HA H N N 428 SER HB2 H N N 429 SER HB3 H N N 430 SER HG H N N 431 SER HXT H N N 432 THR N N N N 433 THR CA C N S 434 THR C C N N 435 THR O O N N 436 THR CB C N R 437 THR OG1 O N N 438 THR CG2 C N N 439 THR OXT O N N 440 THR H H N N 441 THR H2 H N N 442 THR HA H N N 443 THR HB H N N 444 THR HG1 H N N 445 THR HG21 H N N 446 THR HG22 H N N 447 THR HG23 H N N 448 THR HXT H N N 449 TRP N N N N 450 TRP CA C N S 451 TRP C C N N 452 TRP O O N N 453 TRP CB C N N 454 TRP CG C Y N 455 TRP CD1 C Y N 456 TRP CD2 C Y N 457 TRP NE1 N Y N 458 TRP CE2 C Y N 459 TRP CE3 C Y N 460 TRP CZ2 C Y N 461 TRP CZ3 C Y N 462 TRP CH2 C Y N 463 TRP OXT O N N 464 TRP H H N N 465 TRP H2 H N N 466 TRP HA H N N 467 TRP HB2 H N N 468 TRP HB3 H N N 469 TRP HD1 H N N 470 TRP HE1 H N N 471 TRP HE3 H N N 472 TRP HZ2 H N N 473 TRP HZ3 H N N 474 TRP HH2 H N N 475 TRP HXT H N N 476 TYR N N N N 477 TYR CA C N S 478 TYR C C N N 479 TYR O O N N 480 TYR CB C N N 481 TYR CG C Y N 482 TYR CD1 C Y N 483 TYR CD2 C Y N 484 TYR CE1 C Y N 485 TYR CE2 C Y N 486 TYR CZ C Y N 487 TYR OH O N N 488 TYR OXT O N N 489 TYR H H N N 490 TYR H2 H N N 491 TYR HA H N N 492 TYR HB2 H N N 493 TYR HB3 H N N 494 TYR HD1 H N N 495 TYR HD2 H N N 496 TYR HE1 H N N 497 TYR HE2 H N N 498 TYR HH H N N 499 TYR HXT H N N 500 VAL N N N N 501 VAL CA C N S 502 VAL C C N N 503 VAL O O N N 504 VAL CB C N N 505 VAL CG1 C N N 506 VAL CG2 C N N 507 VAL OXT O N N 508 VAL H H N N 509 VAL H2 H N N 510 VAL HA H N N 511 VAL HB H N N 512 VAL HG11 H N N 513 VAL HG12 H N N 514 VAL HG13 H N N 515 VAL HG21 H N N 516 VAL HG22 H N N 517 VAL HG23 H N N 518 VAL HXT H N N 519 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 DA OP3 P sing N N 70 DA OP3 HOP3 sing N N 71 DA P OP1 doub N N 72 DA P OP2 sing N N 73 DA P "O5'" sing N N 74 DA OP2 HOP2 sing N N 75 DA "O5'" "C5'" sing N N 76 DA "C5'" "C4'" sing N N 77 DA "C5'" "H5'" sing N N 78 DA "C5'" "H5''" sing N N 79 DA "C4'" "O4'" sing N N 80 DA "C4'" "C3'" sing N N 81 DA "C4'" "H4'" sing N N 82 DA "O4'" "C1'" sing N N 83 DA "C3'" "O3'" sing N N 84 DA "C3'" "C2'" sing N N 85 DA "C3'" "H3'" sing N N 86 DA "O3'" "HO3'" sing N N 87 DA "C2'" "C1'" sing N N 88 DA "C2'" "H2'" sing N N 89 DA "C2'" "H2''" sing N N 90 DA "C1'" N9 sing N N 91 DA "C1'" "H1'" sing N N 92 DA N9 C8 sing Y N 93 DA N9 C4 sing Y N 94 DA C8 N7 doub Y N 95 DA C8 H8 sing N N 96 DA N7 C5 sing Y N 97 DA C5 C6 sing Y N 98 DA C5 C4 doub Y N 99 DA C6 N6 sing N N 100 DA C6 N1 doub Y N 101 DA N6 H61 sing N N 102 DA N6 H62 sing N N 103 DA N1 C2 sing Y N 104 DA C2 N3 doub Y N 105 DA C2 H2 sing N N 106 DA N3 C4 sing Y N 107 DC OP3 P sing N N 108 DC OP3 HOP3 sing N N 109 DC P OP1 doub N N 110 DC P OP2 sing N N 111 DC P "O5'" sing N N 112 DC OP2 HOP2 sing N N 113 DC "O5'" "C5'" sing N N 114 DC "C5'" "C4'" sing N N 115 DC "C5'" "H5'" sing N N 116 DC "C5'" "H5''" sing N N 117 DC "C4'" "O4'" sing N N 118 DC "C4'" "C3'" sing N N 119 DC "C4'" "H4'" sing N N 120 DC "O4'" "C1'" sing N N 121 DC "C3'" "O3'" sing N N 122 DC "C3'" "C2'" sing N N 123 DC "C3'" "H3'" sing N N 124 DC "O3'" "HO3'" sing N N 125 DC "C2'" "C1'" sing N N 126 DC "C2'" "H2'" sing N N 127 DC "C2'" "H2''" sing N N 128 DC "C1'" N1 sing N N 129 DC "C1'" "H1'" sing N N 130 DC N1 C2 sing N N 131 DC N1 C6 sing N N 132 DC C2 O2 doub N N 133 DC C2 N3 sing N N 134 DC N3 C4 doub N N 135 DC C4 N4 sing N N 136 DC C4 C5 sing N N 137 DC N4 H41 sing N N 138 DC N4 H42 sing N N 139 DC C5 C6 doub N N 140 DC C5 H5 sing N N 141 DC C6 H6 sing N N 142 DG OP3 P sing N N 143 DG OP3 HOP3 sing N N 144 DG P OP1 doub N N 145 DG P OP2 sing N N 146 DG P "O5'" sing N N 147 DG OP2 HOP2 sing N N 148 DG "O5'" "C5'" sing N N 149 DG "C5'" "C4'" sing N N 150 DG "C5'" "H5'" sing N N 151 DG "C5'" "H5''" sing N N 152 DG "C4'" "O4'" sing N N 153 DG "C4'" "C3'" sing N N 154 DG "C4'" "H4'" sing N N 155 DG "O4'" "C1'" sing N N 156 DG "C3'" "O3'" sing N N 157 DG "C3'" "C2'" sing N N 158 DG "C3'" "H3'" sing N N 159 DG "O3'" "HO3'" sing N N 160 DG "C2'" "C1'" sing N N 161 DG "C2'" "H2'" sing N N 162 DG "C2'" "H2''" sing N N 163 DG "C1'" N9 sing N N 164 DG "C1'" "H1'" sing N N 165 DG N9 C8 sing Y N 166 DG N9 C4 sing Y N 167 DG C8 N7 doub Y N 168 DG C8 H8 sing N N 169 DG N7 C5 sing Y N 170 DG C5 C6 sing N N 171 DG C5 C4 doub Y N 172 DG C6 O6 doub N N 173 DG C6 N1 sing N N 174 DG N1 C2 sing N N 175 DG N1 H1 sing N N 176 DG C2 N2 sing N N 177 DG C2 N3 doub N N 178 DG N2 H21 sing N N 179 DG N2 H22 sing N N 180 DG N3 C4 sing N N 181 DT OP3 P sing N N 182 DT OP3 HOP3 sing N N 183 DT P OP1 doub N N 184 DT P OP2 sing N N 185 DT P "O5'" sing N N 186 DT OP2 HOP2 sing N N 187 DT "O5'" "C5'" sing N N 188 DT "C5'" "C4'" sing N N 189 DT "C5'" "H5'" sing N N 190 DT "C5'" "H5''" sing N N 191 DT "C4'" "O4'" sing N N 192 DT "C4'" "C3'" sing N N 193 DT "C4'" "H4'" sing N N 194 DT "O4'" "C1'" sing N N 195 DT "C3'" "O3'" sing N N 196 DT "C3'" "C2'" sing N N 197 DT "C3'" "H3'" sing N N 198 DT "O3'" "HO3'" sing N N 199 DT "C2'" "C1'" sing N N 200 DT "C2'" "H2'" sing N N 201 DT "C2'" "H2''" sing N N 202 DT "C1'" N1 sing N N 203 DT "C1'" "H1'" sing N N 204 DT N1 C2 sing N N 205 DT N1 C6 sing N N 206 DT C2 O2 doub N N 207 DT C2 N3 sing N N 208 DT N3 C4 sing N N 209 DT N3 H3 sing N N 210 DT C4 O4 doub N N 211 DT C4 C5 sing N N 212 DT C5 C7 sing N N 213 DT C5 C6 doub N N 214 DT C7 H71 sing N N 215 DT C7 H72 sing N N 216 DT C7 H73 sing N N 217 DT C6 H6 sing N N 218 GLN N CA sing N N 219 GLN N H sing N N 220 GLN N H2 sing N N 221 GLN CA C sing N N 222 GLN CA CB sing N N 223 GLN CA HA sing N N 224 GLN C O doub N N 225 GLN C OXT sing N N 226 GLN CB CG sing N N 227 GLN CB HB2 sing N N 228 GLN CB HB3 sing N N 229 GLN CG CD sing N N 230 GLN CG HG2 sing N N 231 GLN CG HG3 sing N N 232 GLN CD OE1 doub N N 233 GLN CD NE2 sing N N 234 GLN NE2 HE21 sing N N 235 GLN NE2 HE22 sing N N 236 GLN OXT HXT sing N N 237 GLU N CA sing N N 238 GLU N H sing N N 239 GLU N H2 sing N N 240 GLU CA C sing N N 241 GLU CA CB sing N N 242 GLU CA HA sing N N 243 GLU C O doub N N 244 GLU C OXT sing N N 245 GLU CB CG sing N N 246 GLU CB HB2 sing N N 247 GLU CB HB3 sing N N 248 GLU CG CD sing N N 249 GLU CG HG2 sing N N 250 GLU CG HG3 sing N N 251 GLU CD OE1 doub N N 252 GLU CD OE2 sing N N 253 GLU OE2 HE2 sing N N 254 GLU OXT HXT sing N N 255 GLY N CA sing N N 256 GLY N H sing N N 257 GLY N H2 sing N N 258 GLY CA C sing N N 259 GLY CA HA2 sing N N 260 GLY CA HA3 sing N N 261 GLY C O doub N N 262 GLY C OXT sing N N 263 GLY OXT HXT sing N N 264 HIS N CA sing N N 265 HIS N H sing N N 266 HIS N H2 sing N N 267 HIS CA C sing N N 268 HIS CA CB sing N N 269 HIS CA HA sing N N 270 HIS C O doub N N 271 HIS C OXT sing N N 272 HIS CB CG sing N N 273 HIS CB HB2 sing N N 274 HIS CB HB3 sing N N 275 HIS CG ND1 sing Y N 276 HIS CG CD2 doub Y N 277 HIS ND1 CE1 doub Y N 278 HIS ND1 HD1 sing N N 279 HIS CD2 NE2 sing Y N 280 HIS CD2 HD2 sing N N 281 HIS CE1 NE2 sing Y N 282 HIS CE1 HE1 sing N N 283 HIS NE2 HE2 sing N N 284 HIS OXT HXT sing N N 285 HOH O H1 sing N N 286 HOH O H2 sing N N 287 ILE N CA sing N N 288 ILE N H sing N N 289 ILE N H2 sing N N 290 ILE CA C sing N N 291 ILE CA CB sing N N 292 ILE CA HA sing N N 293 ILE C O doub N N 294 ILE C OXT sing N N 295 ILE CB CG1 sing N N 296 ILE CB CG2 sing N N 297 ILE CB HB sing N N 298 ILE CG1 CD1 sing N N 299 ILE CG1 HG12 sing N N 300 ILE CG1 HG13 sing N N 301 ILE CG2 HG21 sing N N 302 ILE CG2 HG22 sing N N 303 ILE CG2 HG23 sing N N 304 ILE CD1 HD11 sing N N 305 ILE CD1 HD12 sing N N 306 ILE CD1 HD13 sing N N 307 ILE OXT HXT sing N N 308 LEU N CA sing N N 309 LEU N H sing N N 310 LEU N H2 sing N N 311 LEU CA C sing N N 312 LEU CA CB sing N N 313 LEU CA HA sing N N 314 LEU C O doub N N 315 LEU C OXT sing N N 316 LEU CB CG sing N N 317 LEU CB HB2 sing N N 318 LEU CB HB3 sing N N 319 LEU CG CD1 sing N N 320 LEU CG CD2 sing N N 321 LEU CG HG sing N N 322 LEU CD1 HD11 sing N N 323 LEU CD1 HD12 sing N N 324 LEU CD1 HD13 sing N N 325 LEU CD2 HD21 sing N N 326 LEU CD2 HD22 sing N N 327 LEU CD2 HD23 sing N N 328 LEU OXT HXT sing N N 329 LYS N CA sing N N 330 LYS N H sing N N 331 LYS N H2 sing N N 332 LYS CA C sing N N 333 LYS CA CB sing N N 334 LYS CA HA sing N N 335 LYS C O doub N N 336 LYS C OXT sing N N 337 LYS CB CG sing N N 338 LYS CB HB2 sing N N 339 LYS CB HB3 sing N N 340 LYS CG CD sing N N 341 LYS CG HG2 sing N N 342 LYS CG HG3 sing N N 343 LYS CD CE sing N N 344 LYS CD HD2 sing N N 345 LYS CD HD3 sing N N 346 LYS CE NZ sing N N 347 LYS CE HE2 sing N N 348 LYS CE HE3 sing N N 349 LYS NZ HZ1 sing N N 350 LYS NZ HZ2 sing N N 351 LYS NZ HZ3 sing N N 352 LYS OXT HXT sing N N 353 MET N CA sing N N 354 MET N H sing N N 355 MET N H2 sing N N 356 MET CA C sing N N 357 MET CA CB sing N N 358 MET CA HA sing N N 359 MET C O doub N N 360 MET C OXT sing N N 361 MET CB CG sing N N 362 MET CB HB2 sing N N 363 MET CB HB3 sing N N 364 MET CG SD sing N N 365 MET CG HG2 sing N N 366 MET CG HG3 sing N N 367 MET SD CE sing N N 368 MET CE HE1 sing N N 369 MET CE HE2 sing N N 370 MET CE HE3 sing N N 371 MET OXT HXT sing N N 372 PHE N CA sing N N 373 PHE N H sing N N 374 PHE N H2 sing N N 375 PHE CA C sing N N 376 PHE CA CB sing N N 377 PHE CA HA sing N N 378 PHE C O doub N N 379 PHE C OXT sing N N 380 PHE CB CG sing N N 381 PHE CB HB2 sing N N 382 PHE CB HB3 sing N N 383 PHE CG CD1 doub Y N 384 PHE CG CD2 sing Y N 385 PHE CD1 CE1 sing Y N 386 PHE CD1 HD1 sing N N 387 PHE CD2 CE2 doub Y N 388 PHE CD2 HD2 sing N N 389 PHE CE1 CZ doub Y N 390 PHE CE1 HE1 sing N N 391 PHE CE2 CZ sing Y N 392 PHE CE2 HE2 sing N N 393 PHE CZ HZ sing N N 394 PHE OXT HXT sing N N 395 PRO N CA sing N N 396 PRO N CD sing N N 397 PRO N H sing N N 398 PRO CA C sing N N 399 PRO CA CB sing N N 400 PRO CA HA sing N N 401 PRO C O doub N N 402 PRO C OXT sing N N 403 PRO CB CG sing N N 404 PRO CB HB2 sing N N 405 PRO CB HB3 sing N N 406 PRO CG CD sing N N 407 PRO CG HG2 sing N N 408 PRO CG HG3 sing N N 409 PRO CD HD2 sing N N 410 PRO CD HD3 sing N N 411 PRO OXT HXT sing N N 412 SER N CA sing N N 413 SER N H sing N N 414 SER N H2 sing N N 415 SER CA C sing N N 416 SER CA CB sing N N 417 SER CA HA sing N N 418 SER C O doub N N 419 SER C OXT sing N N 420 SER CB OG sing N N 421 SER CB HB2 sing N N 422 SER CB HB3 sing N N 423 SER OG HG sing N N 424 SER OXT HXT sing N N 425 THR N CA sing N N 426 THR N H sing N N 427 THR N H2 sing N N 428 THR CA C sing N N 429 THR CA CB sing N N 430 THR CA HA sing N N 431 THR C O doub N N 432 THR C OXT sing N N 433 THR CB OG1 sing N N 434 THR CB CG2 sing N N 435 THR CB HB sing N N 436 THR OG1 HG1 sing N N 437 THR CG2 HG21 sing N N 438 THR CG2 HG22 sing N N 439 THR CG2 HG23 sing N N 440 THR OXT HXT sing N N 441 TRP N CA sing N N 442 TRP N H sing N N 443 TRP N H2 sing N N 444 TRP CA C sing N N 445 TRP CA CB sing N N 446 TRP CA HA sing N N 447 TRP C O doub N N 448 TRP C OXT sing N N 449 TRP CB CG sing N N 450 TRP CB HB2 sing N N 451 TRP CB HB3 sing N N 452 TRP CG CD1 doub Y N 453 TRP CG CD2 sing Y N 454 TRP CD1 NE1 sing Y N 455 TRP CD1 HD1 sing N N 456 TRP CD2 CE2 doub Y N 457 TRP CD2 CE3 sing Y N 458 TRP NE1 CE2 sing Y N 459 TRP NE1 HE1 sing N N 460 TRP CE2 CZ2 sing Y N 461 TRP CE3 CZ3 doub Y N 462 TRP CE3 HE3 sing N N 463 TRP CZ2 CH2 doub Y N 464 TRP CZ2 HZ2 sing N N 465 TRP CZ3 CH2 sing Y N 466 TRP CZ3 HZ3 sing N N 467 TRP CH2 HH2 sing N N 468 TRP OXT HXT sing N N 469 TYR N CA sing N N 470 TYR N H sing N N 471 TYR N H2 sing N N 472 TYR CA C sing N N 473 TYR CA CB sing N N 474 TYR CA HA sing N N 475 TYR C O doub N N 476 TYR C OXT sing N N 477 TYR CB CG sing N N 478 TYR CB HB2 sing N N 479 TYR CB HB3 sing N N 480 TYR CG CD1 doub Y N 481 TYR CG CD2 sing Y N 482 TYR CD1 CE1 sing Y N 483 TYR CD1 HD1 sing N N 484 TYR CD2 CE2 doub Y N 485 TYR CD2 HD2 sing N N 486 TYR CE1 CZ doub Y N 487 TYR CE1 HE1 sing N N 488 TYR CE2 CZ sing Y N 489 TYR CE2 HE2 sing N N 490 TYR CZ OH sing N N 491 TYR OH HH sing N N 492 TYR OXT HXT sing N N 493 VAL N CA sing N N 494 VAL N H sing N N 495 VAL N H2 sing N N 496 VAL CA C sing N N 497 VAL CA CB sing N N 498 VAL CA HA sing N N 499 VAL C O doub N N 500 VAL C OXT sing N N 501 VAL CB CG1 sing N N 502 VAL CB CG2 sing N N 503 VAL CB HB sing N N 504 VAL CG1 HG11 sing N N 505 VAL CG1 HG12 sing N N 506 VAL CG1 HG13 sing N N 507 VAL CG2 HG21 sing N N 508 VAL CG2 HG22 sing N N 509 VAL CG2 HG23 sing N N 510 VAL OXT HXT sing N N 511 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4NHJ 'double helix' 4NHJ 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 C DG 2 1_555 D DC 23 1_555 -0.845 -0.189 0.095 5.387 -12.942 3.118 1 C_DG2:DC23_D C 2 ? D 23 ? 19 1 1 C DT 3 1_555 D DA 22 1_555 0.214 0.226 -0.448 2.819 -16.056 1.273 2 C_DT3:DA22_D C 3 ? D 22 ? 20 1 1 C DT 4 1_555 D DA 21 1_555 -0.383 -0.060 0.196 3.869 -20.168 1.158 3 C_DT4:DA21_D C 4 ? D 21 ? 20 1 1 C DG 5 1_555 D DC 20 1_555 -0.188 0.214 0.702 7.873 -3.119 7.919 4 C_DG5:DC20_D C 5 ? D 20 ? ? 1 1 C DT 6 1_555 D DA 19 1_555 -0.568 -0.021 0.445 0.527 -33.527 -7.381 5 C_DT6:DA19_D C 6 ? D 19 ? 20 1 1 C DA 7 1_555 D DT 18 1_555 -0.163 -0.246 0.151 -0.930 -0.311 5.971 6 C_DA7:DT18_D C 7 ? D 18 ? 20 1 1 C DC 8 1_555 D DG 17 1_555 0.468 -0.025 -0.148 10.549 -1.607 0.651 7 C_DC8:DG17_D C 8 ? D 17 ? 19 1 1 C DA 9 1_555 D DT 16 1_555 -0.270 0.200 -0.455 -11.456 -11.088 11.670 8 C_DA9:DT16_D C 9 ? D 16 ? ? 1 1 C DT 10 1_555 D DA 15 1_555 -0.034 0.089 -0.084 -5.058 -17.367 5.902 9 C_DT10:DA15_D C 10 ? D 15 ? 20 1 1 C DT 11 1_555 D DA 14 1_555 -0.478 -0.255 -0.140 -7.944 -12.315 -2.600 10 C_DT11:DA14_D C 11 ? D 14 ? 20 1 1 C DC 12 1_555 D DG 13 1_555 -0.429 -0.392 0.408 -13.890 -13.298 -2.918 11 C_DC12:DG13_D C 12 ? D 13 ? 19 1 1 C DC 13 1_555 D DG 12 1_555 -0.323 0.115 0.042 -0.843 -3.787 1.716 12 C_DC13:DG12_D C 13 ? D 12 ? 19 1 1 C DG 14 1_555 D DC 11 1_555 -0.126 -0.094 0.172 1.892 -11.067 2.651 13 C_DG14:DC11_D C 14 ? D 11 ? 19 1 1 C DT 15 1_555 D DA 10 1_555 -0.101 -0.322 0.467 -1.231 -17.271 -0.450 14 C_DT15:DA10_D C 15 ? D 10 ? 20 1 1 C DT 16 1_555 D DA 9 1_555 0.300 -0.261 0.214 -6.657 -18.154 -0.296 15 C_DT16:DA9_D C 16 ? D 9 ? 20 1 1 C DA 17 1_555 D DT 8 1_555 0.929 -0.305 -0.037 -3.380 -1.942 2.979 16 C_DA17:DT8_D C 17 ? D 8 ? 20 1 1 C DC 18 1_555 D DG 7 1_555 0.683 -0.139 0.229 4.720 -15.365 3.553 17 C_DC18:DG7_D C 18 ? D 7 ? 19 1 1 C DT 19 1_555 D DA 6 1_555 0.107 0.222 0.080 -1.563 -25.450 12.942 18 C_DT19:DA6_D C 19 ? D 6 ? ? ? 1 C DC 20 1_555 D DG 5 1_555 0.029 -0.024 -0.432 7.340 -16.277 -8.370 19 C_DC20:DG5_D C 20 ? D 5 ? 19 1 1 C DC 21 1_555 D DG 4 1_555 -0.186 -0.420 1.137 -16.433 -15.167 0.199 20 C_DC21:DG4_D C 21 ? D 4 ? 19 1 1 C DC 22 1_555 D DG 3 1_555 -0.351 0.077 0.629 -11.025 -11.657 7.626 21 C_DC22:DG3_D C 22 ? D 3 ? 19 1 1 C DT 23 1_555 D DA 2 1_555 -0.297 0.160 -0.066 0.438 -16.127 -1.902 22 C_DT23:DA2_D C 23 ? D 2 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 C DG 2 1_555 D DC 23 1_555 C DT 3 1_555 D DA 22 1_555 -0.693 -0.667 3.200 2.418 3.158 37.894 -1.408 1.358 3.089 4.847 -3.712 38.095 1 CC_DG2DT3:DA22DC23_DD C 2 ? D 23 ? C 3 ? D 22 ? 1 C DT 3 1_555 D DA 22 1_555 C DT 4 1_555 D DA 21 1_555 0.270 -0.297 3.286 -3.510 3.129 29.877 -1.201 -1.226 3.187 6.022 6.755 30.236 2 CC_DT3DT4:DA21DA22_DD C 3 ? D 22 ? C 4 ? D 21 ? 1 C DT 4 1_555 D DA 21 1_555 C DG 5 1_555 D DC 20 1_555 0.960 1.048 3.277 2.883 -0.981 39.062 1.681 -1.083 3.311 -1.464 -4.304 39.176 3 CC_DT4DG5:DC20DA21_DD C 4 ? D 21 ? C 5 ? D 20 ? 1 C DG 5 1_555 D DC 20 1_555 C DT 6 1_555 D DA 19 1_555 -1.820 0.326 3.570 0.525 -7.305 34.708 1.691 3.073 3.406 -12.079 -0.868 35.449 4 CC_DG5DT6:DA19DC20_DD C 5 ? D 20 ? C 6 ? D 19 ? 1 C DT 6 1_555 D DA 19 1_555 C DA 7 1_555 D DT 18 1_555 1.866 1.716 3.436 4.632 -10.934 46.366 3.008 -1.927 3.140 -13.626 -5.772 47.781 5 CC_DT6DA7:DT18DA19_DD C 6 ? D 19 ? C 7 ? D 18 ? 1 C DA 7 1_555 D DT 18 1_555 C DC 8 1_555 D DG 17 1_555 0.404 -0.341 2.955 2.347 3.638 30.023 -1.313 -0.347 2.916 6.976 -4.500 30.326 6 CC_DA7DC8:DG17DT18_DD C 7 ? D 18 ? C 8 ? D 17 ? 1 C DC 8 1_555 D DG 17 1_555 C DA 9 1_555 D DT 16 1_555 0.573 -0.664 3.479 6.997 9.406 39.257 -2.041 -0.008 3.292 13.635 -10.143 40.904 7 CC_DC8DA9:DT16DG17_DD C 8 ? D 17 ? C 9 ? D 16 ? 1 C DA 9 1_555 D DT 16 1_555 C DT 10 1_555 D DA 15 1_555 -0.158 -0.582 3.077 -1.301 -1.285 32.801 -0.822 0.069 3.100 -2.274 2.301 32.851 8 CC_DA9DT10:DA15DT16_DD C 9 ? D 16 ? C 10 ? D 15 ? 1 C DT 10 1_555 D DA 15 1_555 C DT 11 1_555 D DA 14 1_555 -0.104 -0.040 3.359 0.417 0.407 38.872 -0.110 0.209 3.357 0.612 -0.626 38.876 9 CC_DT10DT11:DA14DA15_DD C 10 ? D 15 ? C 11 ? D 14 ? 1 C DT 11 1_555 D DA 14 1_555 C DC 12 1_555 D DG 13 1_555 -0.412 -0.053 3.445 -5.318 -1.213 36.910 0.088 -0.104 3.469 -1.903 8.344 37.297 10 CC_DT11DC12:DG13DA14_DD C 11 ? D 14 ? C 12 ? D 13 ? 1 C DC 12 1_555 D DG 13 1_555 C DC 13 1_555 D DG 12 1_555 0.902 1.049 3.164 5.443 -0.539 36.015 1.753 -0.698 3.246 -0.866 -8.741 36.415 11 CC_DC12DC13:DG12DG13_DD C 12 ? D 13 ? C 13 ? D 12 ? 1 C DC 13 1_555 D DG 12 1_555 C DG 14 1_555 D DC 11 1_555 -1.026 0.850 3.207 -5.232 5.017 36.721 0.653 0.898 3.399 7.870 8.207 37.406 12 CC_DC13DG14:DC11DG12_DD C 13 ? D 12 ? C 14 ? D 11 ? 1 C DG 14 1_555 D DC 11 1_555 C DT 15 1_555 D DA 10 1_555 0.112 -0.238 3.384 -1.375 -1.094 38.798 -0.221 -0.342 3.384 -1.645 2.069 38.836 13 CC_DG14DT15:DA10DC11_DD C 14 ? D 11 ? C 15 ? D 10 ? 1 C DT 15 1_555 D DA 10 1_555 C DT 16 1_555 D DA 9 1_555 -0.067 -0.435 3.295 3.431 3.883 31.198 -1.517 0.758 3.194 7.158 -6.325 31.614 14 CC_DT15DT16:DA9DA10_DD C 15 ? D 10 ? C 16 ? D 9 ? 1 C DT 16 1_555 D DA 9 1_555 C DA 17 1_555 D DT 8 1_555 1.304 0.578 3.400 6.693 -4.500 42.186 1.264 -1.076 3.481 -6.184 -9.198 42.916 15 CC_DT16DA17:DT8DA9_DD C 16 ? D 9 ? C 17 ? D 8 ? 1 C DA 17 1_555 D DT 8 1_555 C DC 18 1_555 D DG 7 1_555 0.381 -0.197 3.083 -0.124 0.980 24.420 -0.752 -0.937 3.071 2.316 0.292 24.440 16 CC_DA17DC18:DG7DT8_DD C 17 ? D 8 ? C 18 ? D 7 ? 1 C DC 18 1_555 D DG 7 1_555 C DT 19 1_555 D DA 6 1_555 0.987 -0.537 3.196 10.796 11.460 37.921 -2.021 -0.231 3.075 16.779 -15.807 40.948 17 CC_DC18DT19:DA6DG7_DD C 18 ? D 7 ? C 19 ? D 6 ? 1 C DT 19 1_555 D DA 6 1_555 C DC 20 1_555 D DG 5 1_555 -0.589 0.022 3.008 4.623 4.254 31.281 -0.662 1.836 2.872 7.790 -8.467 31.890 18 CC_DT19DC20:DG5DA6_DD C 19 ? D 6 ? C 20 ? D 5 ? 1 C DC 20 1_555 D DG 5 1_555 C DC 21 1_555 D DG 4 1_555 0.998 -0.232 3.931 -6.246 -1.179 38.439 -0.179 -2.390 3.735 -1.775 9.409 38.942 19 CC_DC20DC21:DG4DG5_DD C 20 ? D 5 ? C 21 ? D 4 ? 1 C DC 21 1_555 D DG 4 1_555 C DC 22 1_555 D DG 3 1_555 0.040 -0.576 3.083 5.208 4.151 31.538 -1.728 0.794 2.954 7.533 -9.449 32.216 20 CC_DC21DC22:DG3DG4_DD C 21 ? D 4 ? C 22 ? D 3 ? 1 C DC 22 1_555 D DG 3 1_555 C DT 23 1_555 D DA 2 1_555 -0.351 -0.514 2.984 2.057 3.305 32.644 -1.419 0.938 2.892 5.854 -3.644 32.869 21 CC_DC22DT23:DA2DG3_DD C 22 ? D 3 ? C 23 ? D 2 ? # _atom_sites.entry_id 4NHJ _atom_sites.fract_transf_matrix[1][1] 0.006253 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.030018 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013740 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_