data_4OOG # _entry.id 4OOG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4OOG pdb_00004oog 10.2210/pdb4oog/pdb NDB NA2905 ? ? RCSB RCSB084749 ? ? WWPDB D_1000084749 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 2NUG _pdbx_database_related.details 'Crystal structure of bacterial RNase III complexed with the product of dsRNA processing' _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 4OOG _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2014-02-02 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Liang, Y.-H.' 1 ? 'Ji, X.' 2 0000-0001-6942-1514 # _citation.id primary _citation.title 'Structure of a Eukaryotic RNase III Postcleavage Complex Reveals a Double-Ruler Mechanism for Substrate Selection.' _citation.journal_abbrev Mol.Cell _citation.journal_volume 54 _citation.page_first 431 _citation.page_last 444 _citation.year 2014 _citation.journal_id_ASTM MOCEFL _citation.country US _citation.journal_id_ISSN 1097-2765 _citation.journal_id_CSD 2168 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24703949 _citation.pdbx_database_id_DOI 10.1016/j.molcel.2014.03.006 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Liang, Y.H.' 1 ? primary 'Lavoie, M.' 2 ? primary 'Comeau, M.A.' 3 ? primary 'Abou Elela, S.' 4 ? primary 'Ji, X.' 5 0000-0001-6942-1514 # _cell.length_a 157.972 _cell.length_b 183.804 _cell.length_c 61.289 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 4OOG _cell.pdbx_unique_axis ? _cell.Z_PDB 16 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.entry_id 4OOG _symmetry.Int_Tables_number 20 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Ribonuclease 3' 12804.515 2 ? ? 'N-terminal domain (UNP residues 42-151)' ? 2 polymer man 'Ribonuclease 3' 29934.600 1 3.1.26.3 ? 'endonuclease domain and double-stranded RNA binding domain (UNP residues 197-457)' ? 3 polymer syn '34-mer RNA' 10908.486 1 ? ? ? ? 4 non-polymer syn 'MAGNESIUM ION' 24.305 4 ? ? ? ? 5 water nat water 18.015 98 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'Ribonuclease III, RNase III' 2 'Ribonuclease III, RNase III' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;SNYKYLEVIQLEHAVTKLVESYNKIIELSPNLVAYNEAVNNQDRVPVQILPSLSRYQLKLAAELKTLHDLKKDAILTEIT DYENEFDTEQKQPILQEISKADMEKLEKLE ; ;SNYKYLEVIQLEHAVTKLVESYNKIIELSPNLVAYNEAVNNQDRVPVQILPSLSRYQLKLAAELKTLHDLKKDAILTEIT DYENEFDTEQKQPILQEISKADMEKLEKLE ; A,B ? 2 'polypeptide(L)' no no ;KWPPKLPEIQDLAIRARVFIHKSTIKDKVYLSGSEMINAHNERLEFLGDSILNSVMTLIIYNKFPDYSEGQLSTLRMNLV SNEQIKQWSIMYNFHEKLKTNFDLKDENSNFQNGKLKLYADVFEAYIGGLMEDDPRNNLPKIRKWLRKLAKPVIEEATRN QVALEKTDKLDMNAKRQLYSLIGYASLRLHYVTVKKPTAVDPNSIVECRVGDGTVLGTGVGRNIKIAGIRAAENALRDKK MLDFYAKQRAAIPRSESVLKD ; ;KWPPKLPEIQDLAIRARVFIHKSTIKDKVYLSGSEMINAHNERLEFLGDSILNSVMTLIIYNKFPDYSEGQLSTLRMNLV SNEQIKQWSIMYNFHEKLKTNFDLKDENSNFQNGKLKLYADVFEAYIGGLMEDDPRNNLPKIRKWLRKLAKPVIEEATRN QVALEKTDKLDMNAKRQLYSLIGYASLRLHYVTVKKPTAVDPNSIVECRVGDGTVLGTGVGRNIKIAGIRAAENALRDKK MLDFYAKQRAAIPRSESVLKD ; C ? 3 polyribonucleotide no no CAUGUCAUGUCAUGAGUCCAUGGCAUGGCAUGGC CAUGUCAUGUCAUGAGUCCAUGGCAUGGCAUGGC D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASN n 1 3 TYR n 1 4 LYS n 1 5 TYR n 1 6 LEU n 1 7 GLU n 1 8 VAL n 1 9 ILE n 1 10 GLN n 1 11 LEU n 1 12 GLU n 1 13 HIS n 1 14 ALA n 1 15 VAL n 1 16 THR n 1 17 LYS n 1 18 LEU n 1 19 VAL n 1 20 GLU n 1 21 SER n 1 22 TYR n 1 23 ASN n 1 24 LYS n 1 25 ILE n 1 26 ILE n 1 27 GLU n 1 28 LEU n 1 29 SER n 1 30 PRO n 1 31 ASN n 1 32 LEU n 1 33 VAL n 1 34 ALA n 1 35 TYR n 1 36 ASN n 1 37 GLU n 1 38 ALA n 1 39 VAL n 1 40 ASN n 1 41 ASN n 1 42 GLN n 1 43 ASP n 1 44 ARG n 1 45 VAL n 1 46 PRO n 1 47 VAL n 1 48 GLN n 1 49 ILE n 1 50 LEU n 1 51 PRO n 1 52 SER n 1 53 LEU n 1 54 SER n 1 55 ARG n 1 56 TYR n 1 57 GLN n 1 58 LEU n 1 59 LYS n 1 60 LEU n 1 61 ALA n 1 62 ALA n 1 63 GLU n 1 64 LEU n 1 65 LYS n 1 66 THR n 1 67 LEU n 1 68 HIS n 1 69 ASP n 1 70 LEU n 1 71 LYS n 1 72 LYS n 1 73 ASP n 1 74 ALA n 1 75 ILE n 1 76 LEU n 1 77 THR n 1 78 GLU n 1 79 ILE n 1 80 THR n 1 81 ASP n 1 82 TYR n 1 83 GLU n 1 84 ASN n 1 85 GLU n 1 86 PHE n 1 87 ASP n 1 88 THR n 1 89 GLU n 1 90 GLN n 1 91 LYS n 1 92 GLN n 1 93 PRO n 1 94 ILE n 1 95 LEU n 1 96 GLN n 1 97 GLU n 1 98 ILE n 1 99 SER n 1 100 LYS n 1 101 ALA n 1 102 ASP n 1 103 MET n 1 104 GLU n 1 105 LYS n 1 106 LEU n 1 107 GLU n 1 108 LYS n 1 109 LEU n 1 110 GLU n 2 1 LYS n 2 2 TRP n 2 3 PRO n 2 4 PRO n 2 5 LYS n 2 6 LEU n 2 7 PRO n 2 8 GLU n 2 9 ILE n 2 10 GLN n 2 11 ASP n 2 12 LEU n 2 13 ALA n 2 14 ILE n 2 15 ARG n 2 16 ALA n 2 17 ARG n 2 18 VAL n 2 19 PHE n 2 20 ILE n 2 21 HIS n 2 22 LYS n 2 23 SER n 2 24 THR n 2 25 ILE n 2 26 LYS n 2 27 ASP n 2 28 LYS n 2 29 VAL n 2 30 TYR n 2 31 LEU n 2 32 SER n 2 33 GLY n 2 34 SER n 2 35 GLU n 2 36 MET n 2 37 ILE n 2 38 ASN n 2 39 ALA n 2 40 HIS n 2 41 ASN n 2 42 GLU n 2 43 ARG n 2 44 LEU n 2 45 GLU n 2 46 PHE n 2 47 LEU n 2 48 GLY n 2 49 ASP n 2 50 SER n 2 51 ILE n 2 52 LEU n 2 53 ASN n 2 54 SER n 2 55 VAL n 2 56 MET n 2 57 THR n 2 58 LEU n 2 59 ILE n 2 60 ILE n 2 61 TYR n 2 62 ASN n 2 63 LYS n 2 64 PHE n 2 65 PRO n 2 66 ASP n 2 67 TYR n 2 68 SER n 2 69 GLU n 2 70 GLY n 2 71 GLN n 2 72 LEU n 2 73 SER n 2 74 THR n 2 75 LEU n 2 76 ARG n 2 77 MET n 2 78 ASN n 2 79 LEU n 2 80 VAL n 2 81 SER n 2 82 ASN n 2 83 GLU n 2 84 GLN n 2 85 ILE n 2 86 LYS n 2 87 GLN n 2 88 TRP n 2 89 SER n 2 90 ILE n 2 91 MET n 2 92 TYR n 2 93 ASN n 2 94 PHE n 2 95 HIS n 2 96 GLU n 2 97 LYS n 2 98 LEU n 2 99 LYS n 2 100 THR n 2 101 ASN n 2 102 PHE n 2 103 ASP n 2 104 LEU n 2 105 LYS n 2 106 ASP n 2 107 GLU n 2 108 ASN n 2 109 SER n 2 110 ASN n 2 111 PHE n 2 112 GLN n 2 113 ASN n 2 114 GLY n 2 115 LYS n 2 116 LEU n 2 117 LYS n 2 118 LEU n 2 119 TYR n 2 120 ALA n 2 121 ASP n 2 122 VAL n 2 123 PHE n 2 124 GLU n 2 125 ALA n 2 126 TYR n 2 127 ILE n 2 128 GLY n 2 129 GLY n 2 130 LEU n 2 131 MET n 2 132 GLU n 2 133 ASP n 2 134 ASP n 2 135 PRO n 2 136 ARG n 2 137 ASN n 2 138 ASN n 2 139 LEU n 2 140 PRO n 2 141 LYS n 2 142 ILE n 2 143 ARG n 2 144 LYS n 2 145 TRP n 2 146 LEU n 2 147 ARG n 2 148 LYS n 2 149 LEU n 2 150 ALA n 2 151 LYS n 2 152 PRO n 2 153 VAL n 2 154 ILE n 2 155 GLU n 2 156 GLU n 2 157 ALA n 2 158 THR n 2 159 ARG n 2 160 ASN n 2 161 GLN n 2 162 VAL n 2 163 ALA n 2 164 LEU n 2 165 GLU n 2 166 LYS n 2 167 THR n 2 168 ASP n 2 169 LYS n 2 170 LEU n 2 171 ASP n 2 172 MET n 2 173 ASN n 2 174 ALA n 2 175 LYS n 2 176 ARG n 2 177 GLN n 2 178 LEU n 2 179 TYR n 2 180 SER n 2 181 LEU n 2 182 ILE n 2 183 GLY n 2 184 TYR n 2 185 ALA n 2 186 SER n 2 187 LEU n 2 188 ARG n 2 189 LEU n 2 190 HIS n 2 191 TYR n 2 192 VAL n 2 193 THR n 2 194 VAL n 2 195 LYS n 2 196 LYS n 2 197 PRO n 2 198 THR n 2 199 ALA n 2 200 VAL n 2 201 ASP n 2 202 PRO n 2 203 ASN n 2 204 SER n 2 205 ILE n 2 206 VAL n 2 207 GLU n 2 208 CYS n 2 209 ARG n 2 210 VAL n 2 211 GLY n 2 212 ASP n 2 213 GLY n 2 214 THR n 2 215 VAL n 2 216 LEU n 2 217 GLY n 2 218 THR n 2 219 GLY n 2 220 VAL n 2 221 GLY n 2 222 ARG n 2 223 ASN n 2 224 ILE n 2 225 LYS n 2 226 ILE n 2 227 ALA n 2 228 GLY n 2 229 ILE n 2 230 ARG n 2 231 ALA n 2 232 ALA n 2 233 GLU n 2 234 ASN n 2 235 ALA n 2 236 LEU n 2 237 ARG n 2 238 ASP n 2 239 LYS n 2 240 LYS n 2 241 MET n 2 242 LEU n 2 243 ASP n 2 244 PHE n 2 245 TYR n 2 246 ALA n 2 247 LYS n 2 248 GLN n 2 249 ARG n 2 250 ALA n 2 251 ALA n 2 252 ILE n 2 253 PRO n 2 254 ARG n 2 255 SER n 2 256 GLU n 2 257 SER n 2 258 VAL n 2 259 LEU n 2 260 LYS n 2 261 ASP n 3 1 C n 3 2 A n 3 3 U n 3 4 G n 3 5 U n 3 6 C n 3 7 A n 3 8 U n 3 9 G n 3 10 U n 3 11 C n 3 12 A n 3 13 U n 3 14 G n 3 15 A n 3 16 G n 3 17 U n 3 18 C n 3 19 C n 3 20 A n 3 21 U n 3 22 G n 3 23 G n 3 24 C n 3 25 A n 3 26 U n 3 27 G n 3 28 G n 3 29 C n 3 30 A n 3 31 U n 3 32 G n 3 33 G n 3 34 C n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? ;Baker's yeast ; ? 'RNT1, YM9408.01C, YM9959.21, YMR239C' ? 'ATCC 204508 / S288c' ? ? ? ? 'Saccharomyces cerevisiae' 559292 ? ? ? ? ? ? ? ? 'Escherichia coli' 1007065 ? ? ? ? ? ? M15 ? ? ? ? ? ? ? plasmid ? ? ? pQE31 ? ? 2 1 sample ? ? ? ;Baker's yeast ; ? 'RNT1, YM9408.01C, YM9959.21, YMR239C' ? 'ATCC 204508 / S288c' ? ? ? ? 'Saccharomyces cerevisiae' 559292 ? ? ? ? ? ? ? ? 'Escherichia coli' 1007065 ? ? ? ? ? ? M15 ? ? ? ? ? ? ? plasmid ? ? ? pQE31 ? ? # _pdbx_entity_src_syn.entity_id 3 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details ;Derived from U5 snRNA 3' end cleavage product ; # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP RNT1_YEAST Q02555 1 ;SNYKYLEVIQLEHAVTKLVESYNKIIELSPNLVAYNEAVNNQDRVPVQILPSLSRYQLKLAAELKTLHDLKKDAILTEIT DYENEFDTEQKQPILQEISKADMEKLEKLE ; 42 ? 2 UNP RNT1_YEAST Q02555 2 ;KWPPKLPEIQDLAIRARVFIHKSTIKDKVYLSGSEMINAHNERLEFLGDSILNSVMTLIIYNKFPDYSEGQLSTLRMNLV SNEQIKQWSIMYNFHEKLKTNFDLKDENSNFQNGKLKLYADVFEAYIGGLMEDDPRNNLPKIRKWLRKLAKPVIEEATRN QVALEKTDKLDMNAKRQLYSLIGYASLRLHYVTVKKPTAVDPNSIVECRVGDGTVLGTGVGRNIKIAGIRAAENALRDKK MLDFYAKQRAAIPRSESVLKD ; 197 ? 3 PDB 4OOG 4OOG 3 CAUGUCAUGUCAUGAGUCCAUGGCAUGGCAUGGC 1 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4OOG A 1 ? 110 ? Q02555 42 ? 151 ? 42 151 2 1 4OOG B 1 ? 110 ? Q02555 42 ? 151 ? 42 151 3 2 4OOG C 1 ? 261 ? Q02555 197 ? 457 ? 197 457 4 3 4OOG D 1 ? 34 ? 4OOG 1 ? 34 ? 1 34 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 4OOG _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 3.35 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 63.26 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.pdbx_details '25% PEG1000, 0.1 M Tris-HCl, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.pdbx_collection_date 2011-11-02 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'double crystal Si(111)' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.pdbx_wavelength_list 1.000 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 22-ID # _reflns.entry_id 4OOG _reflns.d_resolution_high 2.500 _reflns.number_obs 31418 _reflns.pdbx_Rmerge_I_obs 0.066 _reflns.pdbx_netI_over_sigmaI 14.45 _reflns.percent_possible_obs 98.7 _reflns.B_iso_Wilson_estimate 50.22 _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 40 _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy 4.7 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.500 2.650 20763 ? 4870 0.784 1.820 ? ? 4.3 ? 4870 97.5 1 1 2.650 2.830 22756 ? 4673 0.450 3.410 ? ? 4.9 ? 4673 99.7 2 1 2.830 3.060 21721 ? 4382 0.201 6.290 ? ? 5.0 ? 4382 99.9 3 1 3.060 3.350 19869 ? 4039 0.108 11.160 ? ? 4.9 ? 4039 99.9 4 1 3.350 3.740 16543 ? 3536 0.082 14.800 ? ? 4.7 ? 3536 95.8 5 1 3.740 4.310 15073 ? 3191 0.051 23.410 ? ? 4.7 ? 3191 97.5 6 1 4.310 5.270 13268 ? 2795 0.037 31.340 ? ? 4.7 ? 2795 99.9 7 1 5.270 7.380 10234 ? 2195 0.034 35.270 ? ? 4.7 ? 2195 99.9 8 1 7.380 40 5736 ? 1329 0.025 44.120 ? ? 4.3 ? 1329 98.2 9 1 # _refine.entry_id 4OOG _refine.ls_d_res_high 2.500 _refine.ls_d_res_low 39.719 _refine.pdbx_ls_sigma_F 1.990 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.16 _refine.ls_number_reflns_obs 31130 _refine.ls_number_reflns_all 31130 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2168 _refine.ls_R_factor_R_work 0.2160 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2394 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 3.26 _refine.ls_number_reflns_R_free 1015 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 78.4156 _refine.solvent_model_param_bsol 62.64 _refine.solvent_model_param_ksol 0.3380 _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -20.7225 _refine.aniso_B[2][2] 42.6053 _refine.aniso_B[3][3] -21.8827 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.3300 _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9800 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 'PDB ENTRIES 3RV0, 3RV1, 1YYW, 2NUG, 1O0W, 3N3W, 3O2R, 3C4T, AND 1T4O' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 193.340 _refine.B_iso_min 32.740 _refine.pdbx_overall_phase_error 33.2300 _refine.occupancy_max 1.000 _refine.occupancy_min 0.500 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3897 _refine_hist.pdbx_number_atoms_nucleic_acid 725 _refine_hist.pdbx_number_atoms_ligand 4 _refine_hist.number_atoms_solvent 98 _refine_hist.number_atoms_total 4724 _refine_hist.d_res_high 2.500 _refine_hist.d_res_low 39.719 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 4826 0.010 ? ? ? 'X-RAY DIFFRACTION' f_angle_d 6655 0.777 ? ? ? 'X-RAY DIFFRACTION' f_chiral_restr 786 0.059 ? ? ? 'X-RAY DIFFRACTION' f_plane_restr 726 0.003 ? ? ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 1974 14.275 ? ? ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 2.500 2.6316 7 97.0 4166 . 0.4102 0.4078 . 135 . 4301 4301 . 'X-RAY DIFFRACTION' 2.6316 2.7964 7 100.0 4242 . 0.3417 0.3548 . 156 . 4398 4398 . 'X-RAY DIFFRACTION' 2.7964 3.0123 7 100.0 4332 . 0.2683 0.3923 . 113 . 4445 4445 . 'X-RAY DIFFRACTION' 3.0123 3.3153 7 100.0 4285 . 0.2135 0.2780 . 158 . 4443 4443 . 'X-RAY DIFFRACTION' 3.3153 3.7947 7 98.0 4266 . 0.2193 0.2524 . 137 . 4403 4403 . 'X-RAY DIFFRACTION' 3.7947 4.7796 7 99.0 4312 . 0.1696 0.2265 . 156 . 4468 4468 . 'X-RAY DIFFRACTION' 4.7796 39.7236 7 100.0 4512 . 0.1794 0.1675 . 160 . 4672 4672 . 'X-RAY DIFFRACTION' # _struct.entry_id 4OOG _struct.title 'Crystal structure of yeast RNase III (Rnt1p) complexed with the product of dsRNA processing' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4OOG _struct_keywords.text ;RNase:RNA complex, ribonuclease III domain, double-stranded RNA-binding domain, endoribonuclease, dsRNA-specific RNase, double-stranded RNA, HYDROLASE-RNA complex ; _struct_keywords.pdbx_keywords HYDROLASE/RNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 4 ? I N N 5 ? J N N 5 ? K N N 5 ? L N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LYS A 4 ? SER A 29 ? LYS A 45 SER A 70 1 ? 26 HELX_P HELX_P2 2 ASN A 31 ? ASN A 41 ? ASN A 72 ASN A 82 1 ? 11 HELX_P HELX_P3 3 PRO A 46 ? SER A 54 ? PRO A 87 SER A 95 5 ? 9 HELX_P HELX_P4 4 ARG A 55 ? LEU A 70 ? ARG A 96 LEU A 111 1 ? 16 HELX_P HELX_P5 5 ALA A 74 ? PHE A 86 ? ALA A 115 PHE A 127 1 ? 13 HELX_P HELX_P6 6 ILE A 98 ? LEU A 109 ? ILE A 139 LEU A 150 1 ? 12 HELX_P HELX_P7 7 LYS B 4 ? SER B 29 ? LYS B 45 SER B 70 1 ? 26 HELX_P HELX_P8 8 ASN B 31 ? ASN B 41 ? ASN B 72 ASN B 82 1 ? 11 HELX_P HELX_P9 9 PRO B 46 ? GLN B 48 ? PRO B 87 GLN B 89 5 ? 3 HELX_P HELX_P10 10 ILE B 49 ? SER B 54 ? ILE B 90 SER B 95 1 ? 6 HELX_P HELX_P11 11 ARG B 55 ? LEU B 70 ? ARG B 96 LEU B 111 1 ? 16 HELX_P HELX_P12 12 ALA B 74 ? ASP B 81 ? ALA B 115 ASP B 122 1 ? 8 HELX_P HELX_P13 13 ASP B 81 ? PHE B 86 ? ASP B 122 PHE B 127 1 ? 6 HELX_P HELX_P14 14 ILE B 98 ? GLU B 110 ? ILE B 139 GLU B 151 1 ? 13 HELX_P HELX_P15 15 ASP C 11 ? VAL C 18 ? ASP C 207 VAL C 214 1 ? 8 HELX_P HELX_P16 16 HIS C 21 ? LYS C 26 ? HIS C 217 LYS C 222 1 ? 6 HELX_P HELX_P17 17 SER C 32 ? ASN C 38 ? SER C 228 ASN C 234 1 ? 7 HELX_P HELX_P18 18 ASN C 41 ? PHE C 64 ? ASN C 237 PHE C 260 1 ? 24 HELX_P HELX_P19 19 SER C 68 ? SER C 81 ? SER C 264 SER C 277 1 ? 14 HELX_P HELX_P20 20 SER C 81 ? TYR C 92 ? SER C 277 TYR C 288 1 ? 12 HELX_P HELX_P21 21 ASN C 93 ? LEU C 98 ? ASN C 289 LEU C 294 1 ? 6 HELX_P HELX_P22 22 LEU C 116 ? ASP C 134 ? LEU C 312 ASP C 330 1 ? 19 HELX_P HELX_P23 23 ASP C 134 ? GLN C 161 ? ASP C 330 GLN C 357 1 ? 28 HELX_P HELX_P24 24 VAL C 162 ? GLU C 165 ? VAL C 358 GLU C 361 5 ? 4 HELX_P HELX_P25 25 ASN C 173 ? ILE C 182 ? ASN C 369 ILE C 378 1 ? 10 HELX_P HELX_P26 26 TYR C 184 ? ARG C 188 ? TYR C 380 ARG C 384 5 ? 5 HELX_P HELX_P27 27 ASN C 223 ? ARG C 237 ? ASN C 419 ARG C 433 1 ? 15 HELX_P HELX_P28 28 ASP C 238 ? ALA C 251 ? ASP C 434 ALA C 447 1 ? 14 HELX_P HELX_P29 29 PRO C 253 ? VAL C 258 ? PRO C 449 VAL C 454 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? C GLU 42 OE1 ? ? ? 1_555 G MG . MG ? ? C GLU 238 C MG 603 1_555 ? ? ? ? ? ? ? 2.034 ? ? metalc2 metalc ? ? C GLU 45 OE2 ? ? ? 1_555 F MG . MG ? ? C GLU 241 C MG 602 1_555 ? ? ? ? ? ? ? 2.031 ? ? metalc3 metalc ? ? C GLU 45 OE1 ? ? ? 1_555 G MG . MG ? ? C GLU 241 C MG 603 1_555 ? ? ? ? ? ? ? 2.016 ? ? metalc4 metalc ? ? C ASP 49 OD2 ? ? ? 1_555 E MG . MG ? ? C ASP 245 C MG 601 1_555 ? ? ? ? ? ? ? 2.030 ? ? metalc5 metalc ? ? C GLU 124 OE2 ? ? ? 1_555 E MG . MG ? ? C GLU 320 C MG 601 1_555 ? ? ? ? ? ? ? 1.994 ? ? metalc6 metalc ? ? C GLU 124 OE1 ? ? ? 1_555 F MG . MG ? ? C GLU 320 C MG 602 1_555 ? ? ? ? ? ? ? 2.021 ? ? metalc7 metalc ? ? E MG . MG ? ? ? 1_555 K HOH . O ? ? C MG 601 C HOH 701 1_555 ? ? ? ? ? ? ? 1.998 ? ? metalc8 metalc ? ? E MG . MG ? ? ? 1_555 K HOH . O ? ? C MG 601 C HOH 702 1_555 ? ? ? ? ? ? ? 1.994 ? ? metalc9 metalc ? ? E MG . MG ? ? ? 1_555 D C 34 "O3'" ? ? C MG 601 D C 34 1_555 ? ? ? ? ? ? ? 2.003 ? ? metalc10 metalc ? ? F MG . MG ? ? ? 1_555 K HOH . O ? ? C MG 602 C HOH 703 1_555 ? ? ? ? ? ? ? 2.002 ? ? metalc11 metalc ? ? F MG . MG ? ? ? 1_555 K HOH . O ? ? C MG 602 C HOH 704 1_555 ? ? ? ? ? ? ? 2.005 ? ? metalc12 metalc ? ? G MG . MG ? ? ? 1_555 K HOH . O ? ? C MG 603 C HOH 705 1_555 ? ? ? ? ? ? ? 2.001 ? ? metalc13 metalc ? ? G MG . MG ? ? ? 1_555 K HOH . O ? ? C MG 603 C HOH 706 1_555 ? ? ? ? ? ? ? 1.993 ? ? metalc14 metalc ? ? G MG . MG ? ? ? 1_555 K HOH . O ? ? C MG 603 C HOH 707 1_555 ? ? ? ? ? ? ? 1.979 ? ? metalc15 metalc ? ? G MG . MG ? ? ? 1_555 K HOH . O ? ? C MG 603 C HOH 708 1_555 ? ? ? ? ? ? ? 2.018 ? ? metalc16 metalc ? ? D G 27 O6 ? ? ? 1_555 H MG . MG ? ? D G 27 D MG 101 1_555 ? ? ? ? ? ? ? 2.016 ? ? metalc17 metalc ? ? H MG . MG ? ? ? 1_555 L HOH . O ? ? D MG 101 D HOH 226 1_555 ? ? ? ? ? ? ? 2.007 ? ? metalc18 metalc ? ? H MG . MG ? ? ? 1_555 L HOH . O ? ? D MG 101 D HOH 227 1_555 ? ? ? ? ? ? ? 2.002 ? ? metalc19 metalc ? ? H MG . MG ? ? ? 1_555 L HOH . O ? ? D MG 101 D HOH 228 1_555 ? ? ? ? ? ? ? 2.018 ? ? metalc20 metalc ? ? H MG . MG ? ? ? 1_555 L HOH . O ? ? D MG 101 D HOH 229 1_555 ? ? ? ? ? ? ? 2.025 ? ? hydrog1 hydrog ? ? D C 1 N3 ? ? ? 1_555 D G 32 N1 ? ? D C 1 D G 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? D C 1 N4 ? ? ? 1_555 D G 32 O6 ? ? D C 1 D G 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? D C 1 O2 ? ? ? 1_555 D G 32 N2 ? ? D C 1 D G 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? D A 2 N1 ? ? ? 1_555 D U 31 N3 ? ? D A 2 D U 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? D A 2 N6 ? ? ? 1_555 D U 31 O4 ? ? D A 2 D U 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? D U 3 N3 ? ? ? 1_555 D A 30 N1 ? ? D U 3 D A 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? D U 3 O4 ? ? ? 1_555 D A 30 N6 ? ? D U 3 D A 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? D G 4 N1 ? ? ? 1_555 D C 29 N3 ? ? D G 4 D C 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? D G 4 N2 ? ? ? 1_555 D C 29 O2 ? ? D G 4 D C 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? D G 4 O6 ? ? ? 1_555 D C 29 N4 ? ? D G 4 D C 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? D U 5 N3 ? ? ? 1_555 D G 28 O6 ? ? D U 5 D G 28 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog12 hydrog ? ? D U 5 O2 ? ? ? 1_555 D G 28 N1 ? ? D U 5 D G 28 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog13 hydrog ? ? D C 6 N3 ? ? ? 1_555 D G 27 N1 ? ? D C 6 D G 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? D C 6 N4 ? ? ? 1_555 D G 27 O6 ? ? D C 6 D G 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? D C 6 O2 ? ? ? 1_555 D G 27 N2 ? ? D C 6 D G 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? D A 7 N1 ? ? ? 1_555 D U 26 N3 ? ? D A 7 D U 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? D A 7 N6 ? ? ? 1_555 D U 26 O4 ? ? D A 7 D U 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? D U 8 N3 ? ? ? 1_555 D A 25 N1 ? ? D U 8 D A 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? D U 8 O4 ? ? ? 1_555 D A 25 N6 ? ? D U 8 D A 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? D G 9 N1 ? ? ? 1_555 D C 24 N3 ? ? D G 9 D C 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? D G 9 N2 ? ? ? 1_555 D C 24 O2 ? ? D G 9 D C 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? D G 9 O6 ? ? ? 1_555 D C 24 N4 ? ? D G 9 D C 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? D U 10 N3 ? ? ? 1_555 D G 23 O6 ? ? D U 10 D G 23 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog24 hydrog ? ? D U 10 O2 ? ? ? 1_555 D G 23 N1 ? ? D U 10 D G 23 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog25 hydrog ? ? D C 11 N3 ? ? ? 1_555 D G 22 N1 ? ? D C 11 D G 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? D C 11 N4 ? ? ? 1_555 D G 22 O6 ? ? D C 11 D G 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? D C 11 O2 ? ? ? 1_555 D G 22 N2 ? ? D C 11 D G 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? D A 12 N1 ? ? ? 1_555 D U 21 N3 ? ? D A 12 D U 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? D A 12 N6 ? ? ? 1_555 D U 21 O4 ? ? D A 12 D U 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? D U 13 N3 ? ? ? 1_555 D A 20 N1 ? ? D U 13 D A 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? D U 13 O4 ? ? ? 1_555 D A 20 N6 ? ? D U 13 D A 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? D G 14 N1 ? ? ? 1_555 D C 19 N3 ? ? D G 14 D C 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? D G 14 N2 ? ? ? 1_555 D C 19 O2 ? ? D G 14 D C 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? D G 14 O6 ? ? ? 1_555 D C 19 N4 ? ? D G 14 D C 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id TRP _struct_mon_prot_cis.label_seq_id 2 _struct_mon_prot_cis.label_asym_id C _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id TRP _struct_mon_prot_cis.auth_seq_id 198 _struct_mon_prot_cis.auth_asym_id C _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 3 _struct_mon_prot_cis.pdbx_label_asym_id_2 C _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 199 _struct_mon_prot_cis.pdbx_auth_asym_id_2 C _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -2.13 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 3 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 HIS C 190 ? LYS C 195 ? HIS C 386 LYS C 391 A 2 SER C 204 ? ARG C 209 ? SER C 400 ARG C 405 A 3 VAL C 215 ? GLY C 221 ? VAL C 411 GLY C 417 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N HIS C 190 ? N HIS C 386 O ARG C 209 ? O ARG C 405 A 2 3 N CYS C 208 ? N CYS C 404 O LEU C 216 ? O LEU C 412 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software C MG 601 ? 7 'BINDING SITE FOR RESIDUE MG C 601' AC2 Software C MG 602 ? 6 'BINDING SITE FOR RESIDUE MG C 602' AC3 Software C MG 603 ? 6 'BINDING SITE FOR RESIDUE MG C 603' AC4 Software D MG 101 ? 5 'BINDING SITE FOR RESIDUE MG D 101' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 ASP C 49 ? ASP C 245 . ? 1_555 ? 2 AC1 7 GLU C 124 ? GLU C 320 . ? 1_555 ? 3 AC1 7 MG F . ? MG C 602 . ? 1_555 ? 4 AC1 7 HOH K . ? HOH C 701 . ? 1_555 ? 5 AC1 7 HOH K . ? HOH C 702 . ? 1_555 ? 6 AC1 7 C D 1 ? C D 1 . ? 3_555 ? 7 AC1 7 C D 34 ? C D 34 . ? 1_555 ? 8 AC2 6 GLU C 45 ? GLU C 241 . ? 1_555 ? 9 AC2 6 GLU C 124 ? GLU C 320 . ? 1_555 ? 10 AC2 6 MG E . ? MG C 601 . ? 1_555 ? 11 AC2 6 HOH K . ? HOH C 703 . ? 1_555 ? 12 AC2 6 HOH K . ? HOH C 704 . ? 1_555 ? 13 AC2 6 C D 1 ? C D 1 . ? 3_555 ? 14 AC3 6 GLU C 42 ? GLU C 238 . ? 1_555 ? 15 AC3 6 GLU C 45 ? GLU C 241 . ? 1_555 ? 16 AC3 6 HOH K . ? HOH C 705 . ? 1_555 ? 17 AC3 6 HOH K . ? HOH C 706 . ? 1_555 ? 18 AC3 6 HOH K . ? HOH C 707 . ? 1_555 ? 19 AC3 6 HOH K . ? HOH C 708 . ? 1_555 ? 20 AC4 5 G D 27 ? G D 27 . ? 1_555 ? 21 AC4 5 HOH L . ? HOH D 226 . ? 1_555 ? 22 AC4 5 HOH L . ? HOH D 227 . ? 1_555 ? 23 AC4 5 HOH L . ? HOH D 228 . ? 1_555 ? 24 AC4 5 HOH L . ? HOH D 229 . ? 1_555 ? # _atom_sites.entry_id 4OOG _atom_sites.fract_transf_matrix[1][1] 0.006330 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.005441 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016316 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 42 ? ? ? A . n A 1 2 ASN 2 43 43 ASN ASN A . n A 1 3 TYR 3 44 44 TYR TYR A . n A 1 4 LYS 4 45 45 LYS LYS A . n A 1 5 TYR 5 46 46 TYR TYR A . n A 1 6 LEU 6 47 47 LEU LEU A . n A 1 7 GLU 7 48 48 GLU GLU A . n A 1 8 VAL 8 49 49 VAL VAL A . n A 1 9 ILE 9 50 50 ILE ILE A . n A 1 10 GLN 10 51 51 GLN GLN A . n A 1 11 LEU 11 52 52 LEU LEU A . n A 1 12 GLU 12 53 53 GLU GLU A . n A 1 13 HIS 13 54 54 HIS HIS A . n A 1 14 ALA 14 55 55 ALA ALA A . n A 1 15 VAL 15 56 56 VAL VAL A . n A 1 16 THR 16 57 57 THR THR A . n A 1 17 LYS 17 58 58 LYS LYS A . n A 1 18 LEU 18 59 59 LEU LEU A . n A 1 19 VAL 19 60 60 VAL VAL A . n A 1 20 GLU 20 61 61 GLU GLU A . n A 1 21 SER 21 62 62 SER SER A . n A 1 22 TYR 22 63 63 TYR TYR A . n A 1 23 ASN 23 64 64 ASN ASN A . n A 1 24 LYS 24 65 65 LYS LYS A . n A 1 25 ILE 25 66 66 ILE ILE A . n A 1 26 ILE 26 67 67 ILE ILE A . n A 1 27 GLU 27 68 68 GLU GLU A . n A 1 28 LEU 28 69 69 LEU LEU A . n A 1 29 SER 29 70 70 SER SER A . n A 1 30 PRO 30 71 71 PRO PRO A . n A 1 31 ASN 31 72 72 ASN ASN A . n A 1 32 LEU 32 73 73 LEU LEU A . n A 1 33 VAL 33 74 74 VAL VAL A . n A 1 34 ALA 34 75 75 ALA ALA A . n A 1 35 TYR 35 76 76 TYR TYR A . n A 1 36 ASN 36 77 77 ASN ASN A . n A 1 37 GLU 37 78 78 GLU GLU A . n A 1 38 ALA 38 79 79 ALA ALA A . n A 1 39 VAL 39 80 80 VAL VAL A . n A 1 40 ASN 40 81 81 ASN ASN A . n A 1 41 ASN 41 82 82 ASN ASN A . n A 1 42 GLN 42 83 83 GLN GLN A . n A 1 43 ASP 43 84 84 ASP ASP A . n A 1 44 ARG 44 85 85 ARG ARG A . n A 1 45 VAL 45 86 86 VAL VAL A . n A 1 46 PRO 46 87 87 PRO PRO A . n A 1 47 VAL 47 88 88 VAL VAL A . n A 1 48 GLN 48 89 89 GLN GLN A . n A 1 49 ILE 49 90 90 ILE ILE A . n A 1 50 LEU 50 91 91 LEU LEU A . n A 1 51 PRO 51 92 92 PRO PRO A . n A 1 52 SER 52 93 93 SER SER A . n A 1 53 LEU 53 94 94 LEU LEU A . n A 1 54 SER 54 95 95 SER SER A . n A 1 55 ARG 55 96 96 ARG ARG A . n A 1 56 TYR 56 97 97 TYR TYR A . n A 1 57 GLN 57 98 98 GLN GLN A . n A 1 58 LEU 58 99 99 LEU LEU A . n A 1 59 LYS 59 100 100 LYS LYS A . n A 1 60 LEU 60 101 101 LEU LEU A . n A 1 61 ALA 61 102 102 ALA ALA A . n A 1 62 ALA 62 103 103 ALA ALA A . n A 1 63 GLU 63 104 104 GLU GLU A . n A 1 64 LEU 64 105 105 LEU LEU A . n A 1 65 LYS 65 106 106 LYS LYS A . n A 1 66 THR 66 107 107 THR THR A . n A 1 67 LEU 67 108 108 LEU LEU A . n A 1 68 HIS 68 109 109 HIS HIS A . n A 1 69 ASP 69 110 110 ASP ASP A . n A 1 70 LEU 70 111 111 LEU LEU A . n A 1 71 LYS 71 112 112 LYS LYS A . n A 1 72 LYS 72 113 113 LYS LYS A . n A 1 73 ASP 73 114 114 ASP ASP A . n A 1 74 ALA 74 115 115 ALA ALA A . n A 1 75 ILE 75 116 116 ILE ILE A . n A 1 76 LEU 76 117 117 LEU LEU A . n A 1 77 THR 77 118 118 THR THR A . n A 1 78 GLU 78 119 119 GLU GLU A . n A 1 79 ILE 79 120 120 ILE ILE A . n A 1 80 THR 80 121 121 THR THR A . n A 1 81 ASP 81 122 122 ASP ASP A . n A 1 82 TYR 82 123 123 TYR TYR A . n A 1 83 GLU 83 124 124 GLU GLU A . n A 1 84 ASN 84 125 125 ASN ASN A . n A 1 85 GLU 85 126 126 GLU GLU A . n A 1 86 PHE 86 127 127 PHE PHE A . n A 1 87 ASP 87 128 128 ASP ASP A . n A 1 88 THR 88 129 129 THR THR A . n A 1 89 GLU 89 130 130 GLU GLU A . n A 1 90 GLN 90 131 131 GLN GLN A . n A 1 91 LYS 91 132 132 LYS LYS A . n A 1 92 GLN 92 133 133 GLN GLN A . n A 1 93 PRO 93 134 134 PRO PRO A . n A 1 94 ILE 94 135 135 ILE ILE A . n A 1 95 LEU 95 136 136 LEU LEU A . n A 1 96 GLN 96 137 137 GLN GLN A . n A 1 97 GLU 97 138 138 GLU GLU A . n A 1 98 ILE 98 139 139 ILE ILE A . n A 1 99 SER 99 140 140 SER SER A . n A 1 100 LYS 100 141 141 LYS LYS A . n A 1 101 ALA 101 142 142 ALA ALA A . n A 1 102 ASP 102 143 143 ASP ASP A . n A 1 103 MET 103 144 144 MET MET A . n A 1 104 GLU 104 145 145 GLU GLU A . n A 1 105 LYS 105 146 146 LYS LYS A . n A 1 106 LEU 106 147 147 LEU LEU A . n A 1 107 GLU 107 148 148 GLU GLU A . n A 1 108 LYS 108 149 149 LYS LYS A . n A 1 109 LEU 109 150 150 LEU LEU A . n A 1 110 GLU 110 151 151 GLU GLU A . n B 1 1 SER 1 42 42 SER SER B . n B 1 2 ASN 2 43 43 ASN ASN B . n B 1 3 TYR 3 44 44 TYR TYR B . n B 1 4 LYS 4 45 45 LYS LYS B . n B 1 5 TYR 5 46 46 TYR TYR B . n B 1 6 LEU 6 47 47 LEU LEU B . n B 1 7 GLU 7 48 48 GLU GLU B . n B 1 8 VAL 8 49 49 VAL VAL B . n B 1 9 ILE 9 50 50 ILE ILE B . n B 1 10 GLN 10 51 51 GLN GLN B . n B 1 11 LEU 11 52 52 LEU LEU B . n B 1 12 GLU 12 53 53 GLU GLU B . n B 1 13 HIS 13 54 54 HIS HIS B . n B 1 14 ALA 14 55 55 ALA ALA B . n B 1 15 VAL 15 56 56 VAL VAL B . n B 1 16 THR 16 57 57 THR THR B . n B 1 17 LYS 17 58 58 LYS LYS B . n B 1 18 LEU 18 59 59 LEU LEU B . n B 1 19 VAL 19 60 60 VAL VAL B . n B 1 20 GLU 20 61 61 GLU GLU B . n B 1 21 SER 21 62 62 SER SER B . n B 1 22 TYR 22 63 63 TYR TYR B . n B 1 23 ASN 23 64 64 ASN ASN B . n B 1 24 LYS 24 65 65 LYS LYS B . n B 1 25 ILE 25 66 66 ILE ILE B . n B 1 26 ILE 26 67 67 ILE ILE B . n B 1 27 GLU 27 68 68 GLU GLU B . n B 1 28 LEU 28 69 69 LEU LEU B . n B 1 29 SER 29 70 70 SER SER B . n B 1 30 PRO 30 71 71 PRO PRO B . n B 1 31 ASN 31 72 72 ASN ASN B . n B 1 32 LEU 32 73 73 LEU LEU B . n B 1 33 VAL 33 74 74 VAL VAL B . n B 1 34 ALA 34 75 75 ALA ALA B . n B 1 35 TYR 35 76 76 TYR TYR B . n B 1 36 ASN 36 77 77 ASN ASN B . n B 1 37 GLU 37 78 78 GLU GLU B . n B 1 38 ALA 38 79 79 ALA ALA B . n B 1 39 VAL 39 80 80 VAL VAL B . n B 1 40 ASN 40 81 81 ASN ASN B . n B 1 41 ASN 41 82 82 ASN ASN B . n B 1 42 GLN 42 83 83 GLN GLN B . n B 1 43 ASP 43 84 84 ASP ASP B . n B 1 44 ARG 44 85 85 ARG ARG B . n B 1 45 VAL 45 86 86 VAL VAL B . n B 1 46 PRO 46 87 87 PRO PRO B . n B 1 47 VAL 47 88 88 VAL VAL B . n B 1 48 GLN 48 89 89 GLN GLN B . n B 1 49 ILE 49 90 90 ILE ILE B . n B 1 50 LEU 50 91 91 LEU LEU B . n B 1 51 PRO 51 92 92 PRO PRO B . n B 1 52 SER 52 93 93 SER SER B . n B 1 53 LEU 53 94 94 LEU LEU B . n B 1 54 SER 54 95 95 SER SER B . n B 1 55 ARG 55 96 96 ARG ARG B . n B 1 56 TYR 56 97 97 TYR TYR B . n B 1 57 GLN 57 98 98 GLN GLN B . n B 1 58 LEU 58 99 99 LEU LEU B . n B 1 59 LYS 59 100 100 LYS LYS B . n B 1 60 LEU 60 101 101 LEU LEU B . n B 1 61 ALA 61 102 102 ALA ALA B . n B 1 62 ALA 62 103 103 ALA ALA B . n B 1 63 GLU 63 104 104 GLU GLU B . n B 1 64 LEU 64 105 105 LEU LEU B . n B 1 65 LYS 65 106 106 LYS LYS B . n B 1 66 THR 66 107 107 THR THR B . n B 1 67 LEU 67 108 108 LEU LEU B . n B 1 68 HIS 68 109 109 HIS HIS B . n B 1 69 ASP 69 110 110 ASP ASP B . n B 1 70 LEU 70 111 111 LEU LEU B . n B 1 71 LYS 71 112 112 LYS LYS B . n B 1 72 LYS 72 113 113 LYS LYS B . n B 1 73 ASP 73 114 114 ASP ASP B . n B 1 74 ALA 74 115 115 ALA ALA B . n B 1 75 ILE 75 116 116 ILE ILE B . n B 1 76 LEU 76 117 117 LEU LEU B . n B 1 77 THR 77 118 118 THR THR B . n B 1 78 GLU 78 119 119 GLU GLU B . n B 1 79 ILE 79 120 120 ILE ILE B . n B 1 80 THR 80 121 121 THR THR B . n B 1 81 ASP 81 122 122 ASP ASP B . n B 1 82 TYR 82 123 123 TYR TYR B . n B 1 83 GLU 83 124 124 GLU GLU B . n B 1 84 ASN 84 125 125 ASN ASN B . n B 1 85 GLU 85 126 126 GLU GLU B . n B 1 86 PHE 86 127 127 PHE PHE B . n B 1 87 ASP 87 128 128 ASP ASP B . n B 1 88 THR 88 129 129 THR THR B . n B 1 89 GLU 89 130 130 GLU GLU B . n B 1 90 GLN 90 131 131 GLN GLN B . n B 1 91 LYS 91 132 132 LYS LYS B . n B 1 92 GLN 92 133 133 GLN GLN B . n B 1 93 PRO 93 134 134 PRO PRO B . n B 1 94 ILE 94 135 135 ILE ILE B . n B 1 95 LEU 95 136 136 LEU LEU B . n B 1 96 GLN 96 137 137 GLN GLN B . n B 1 97 GLU 97 138 138 GLU GLU B . n B 1 98 ILE 98 139 139 ILE ILE B . n B 1 99 SER 99 140 140 SER SER B . n B 1 100 LYS 100 141 141 LYS LYS B . n B 1 101 ALA 101 142 142 ALA ALA B . n B 1 102 ASP 102 143 143 ASP ASP B . n B 1 103 MET 103 144 144 MET MET B . n B 1 104 GLU 104 145 145 GLU GLU B . n B 1 105 LYS 105 146 146 LYS LYS B . n B 1 106 LEU 106 147 147 LEU LEU B . n B 1 107 GLU 107 148 148 GLU GLU B . n B 1 108 LYS 108 149 149 LYS LYS B . n B 1 109 LEU 109 150 150 LEU LEU B . n B 1 110 GLU 110 151 151 GLU GLU B . n C 2 1 LYS 1 197 197 LYS LYS C . n C 2 2 TRP 2 198 198 TRP TRP C . n C 2 3 PRO 3 199 199 PRO PRO C . n C 2 4 PRO 4 200 200 PRO PRO C . n C 2 5 LYS 5 201 201 LYS LYS C . n C 2 6 LEU 6 202 202 LEU LEU C . n C 2 7 PRO 7 203 203 PRO PRO C . n C 2 8 GLU 8 204 204 GLU GLU C . n C 2 9 ILE 9 205 205 ILE ILE C . n C 2 10 GLN 10 206 206 GLN GLN C . n C 2 11 ASP 11 207 207 ASP ASP C . n C 2 12 LEU 12 208 208 LEU LEU C . n C 2 13 ALA 13 209 209 ALA ALA C . n C 2 14 ILE 14 210 210 ILE ILE C . n C 2 15 ARG 15 211 211 ARG ARG C . n C 2 16 ALA 16 212 212 ALA ALA C . n C 2 17 ARG 17 213 213 ARG ARG C . n C 2 18 VAL 18 214 214 VAL VAL C . n C 2 19 PHE 19 215 215 PHE PHE C . n C 2 20 ILE 20 216 216 ILE ILE C . n C 2 21 HIS 21 217 217 HIS HIS C . n C 2 22 LYS 22 218 218 LYS LYS C . n C 2 23 SER 23 219 219 SER SER C . n C 2 24 THR 24 220 220 THR THR C . n C 2 25 ILE 25 221 221 ILE ILE C . n C 2 26 LYS 26 222 222 LYS LYS C . n C 2 27 ASP 27 223 223 ASP ASP C . n C 2 28 LYS 28 224 224 LYS LYS C . n C 2 29 VAL 29 225 225 VAL VAL C . n C 2 30 TYR 30 226 226 TYR TYR C . n C 2 31 LEU 31 227 227 LEU LEU C . n C 2 32 SER 32 228 228 SER SER C . n C 2 33 GLY 33 229 229 GLY GLY C . n C 2 34 SER 34 230 230 SER SER C . n C 2 35 GLU 35 231 231 GLU GLU C . n C 2 36 MET 36 232 232 MET MET C . n C 2 37 ILE 37 233 233 ILE ILE C . n C 2 38 ASN 38 234 234 ASN ASN C . n C 2 39 ALA 39 235 235 ALA ALA C . n C 2 40 HIS 40 236 236 HIS HIS C . n C 2 41 ASN 41 237 237 ASN ASN C . n C 2 42 GLU 42 238 238 GLU GLU C . n C 2 43 ARG 43 239 239 ARG ARG C . n C 2 44 LEU 44 240 240 LEU LEU C . n C 2 45 GLU 45 241 241 GLU GLU C . n C 2 46 PHE 46 242 242 PHE PHE C . n C 2 47 LEU 47 243 243 LEU LEU C . n C 2 48 GLY 48 244 244 GLY GLY C . n C 2 49 ASP 49 245 245 ASP ASP C . n C 2 50 SER 50 246 246 SER SER C . n C 2 51 ILE 51 247 247 ILE ILE C . n C 2 52 LEU 52 248 248 LEU LEU C . n C 2 53 ASN 53 249 249 ASN ASN C . n C 2 54 SER 54 250 250 SER SER C . n C 2 55 VAL 55 251 251 VAL VAL C . n C 2 56 MET 56 252 252 MET MET C . n C 2 57 THR 57 253 253 THR THR C . n C 2 58 LEU 58 254 254 LEU LEU C . n C 2 59 ILE 59 255 255 ILE ILE C . n C 2 60 ILE 60 256 256 ILE ILE C . n C 2 61 TYR 61 257 257 TYR TYR C . n C 2 62 ASN 62 258 258 ASN ASN C . n C 2 63 LYS 63 259 259 LYS LYS C . n C 2 64 PHE 64 260 260 PHE PHE C . n C 2 65 PRO 65 261 261 PRO PRO C . n C 2 66 ASP 66 262 262 ASP ASP C . n C 2 67 TYR 67 263 263 TYR TYR C . n C 2 68 SER 68 264 264 SER SER C . n C 2 69 GLU 69 265 265 GLU GLU C . n C 2 70 GLY 70 266 266 GLY GLY C . n C 2 71 GLN 71 267 267 GLN GLN C . n C 2 72 LEU 72 268 268 LEU LEU C . n C 2 73 SER 73 269 269 SER SER C . n C 2 74 THR 74 270 270 THR THR C . n C 2 75 LEU 75 271 271 LEU LEU C . n C 2 76 ARG 76 272 272 ARG ARG C . n C 2 77 MET 77 273 273 MET MET C . n C 2 78 ASN 78 274 274 ASN ASN C . n C 2 79 LEU 79 275 275 LEU LEU C . n C 2 80 VAL 80 276 276 VAL VAL C . n C 2 81 SER 81 277 277 SER SER C . n C 2 82 ASN 82 278 278 ASN ASN C . n C 2 83 GLU 83 279 279 GLU GLU C . n C 2 84 GLN 84 280 280 GLN GLN C . n C 2 85 ILE 85 281 281 ILE ILE C . n C 2 86 LYS 86 282 282 LYS LYS C . n C 2 87 GLN 87 283 283 GLN GLN C . n C 2 88 TRP 88 284 284 TRP TRP C . n C 2 89 SER 89 285 285 SER SER C . n C 2 90 ILE 90 286 286 ILE ILE C . n C 2 91 MET 91 287 287 MET MET C . n C 2 92 TYR 92 288 288 TYR TYR C . n C 2 93 ASN 93 289 289 ASN ASN C . n C 2 94 PHE 94 290 290 PHE PHE C . n C 2 95 HIS 95 291 291 HIS HIS C . n C 2 96 GLU 96 292 292 GLU GLU C . n C 2 97 LYS 97 293 293 LYS LYS C . n C 2 98 LEU 98 294 294 LEU LEU C . n C 2 99 LYS 99 295 295 LYS LYS C . n C 2 100 THR 100 296 296 THR THR C . n C 2 101 ASN 101 297 297 ASN ASN C . n C 2 102 PHE 102 298 298 PHE PHE C . n C 2 103 ASP 103 299 299 ASP ASP C . n C 2 104 LEU 104 300 300 LEU LEU C . n C 2 105 LYS 105 301 301 LYS LYS C . n C 2 106 ASP 106 302 302 ASP ASP C . n C 2 107 GLU 107 303 303 GLU GLU C . n C 2 108 ASN 108 304 304 ASN ASN C . n C 2 109 SER 109 305 305 SER SER C . n C 2 110 ASN 110 306 306 ASN ASN C . n C 2 111 PHE 111 307 307 PHE PHE C . n C 2 112 GLN 112 308 308 GLN GLN C . n C 2 113 ASN 113 309 309 ASN ASN C . n C 2 114 GLY 114 310 310 GLY GLY C . n C 2 115 LYS 115 311 311 LYS LYS C . n C 2 116 LEU 116 312 312 LEU LEU C . n C 2 117 LYS 117 313 313 LYS LYS C . n C 2 118 LEU 118 314 314 LEU LEU C . n C 2 119 TYR 119 315 315 TYR TYR C . n C 2 120 ALA 120 316 316 ALA ALA C . n C 2 121 ASP 121 317 317 ASP ASP C . n C 2 122 VAL 122 318 318 VAL VAL C . n C 2 123 PHE 123 319 319 PHE PHE C . n C 2 124 GLU 124 320 320 GLU GLU C . n C 2 125 ALA 125 321 321 ALA ALA C . n C 2 126 TYR 126 322 322 TYR TYR C . n C 2 127 ILE 127 323 323 ILE ILE C . n C 2 128 GLY 128 324 324 GLY GLY C . n C 2 129 GLY 129 325 325 GLY GLY C . n C 2 130 LEU 130 326 326 LEU LEU C . n C 2 131 MET 131 327 327 MET MET C . n C 2 132 GLU 132 328 328 GLU GLU C . n C 2 133 ASP 133 329 329 ASP ASP C . n C 2 134 ASP 134 330 330 ASP ASP C . n C 2 135 PRO 135 331 331 PRO PRO C . n C 2 136 ARG 136 332 332 ARG ARG C . n C 2 137 ASN 137 333 333 ASN ASN C . n C 2 138 ASN 138 334 334 ASN ASN C . n C 2 139 LEU 139 335 335 LEU LEU C . n C 2 140 PRO 140 336 336 PRO PRO C . n C 2 141 LYS 141 337 337 LYS LYS C . n C 2 142 ILE 142 338 338 ILE ILE C . n C 2 143 ARG 143 339 339 ARG ARG C . n C 2 144 LYS 144 340 340 LYS LYS C . n C 2 145 TRP 145 341 341 TRP TRP C . n C 2 146 LEU 146 342 342 LEU LEU C . n C 2 147 ARG 147 343 343 ARG ARG C . n C 2 148 LYS 148 344 344 LYS LYS C . n C 2 149 LEU 149 345 345 LEU LEU C . n C 2 150 ALA 150 346 346 ALA ALA C . n C 2 151 LYS 151 347 347 LYS LYS C . n C 2 152 PRO 152 348 348 PRO PRO C . n C 2 153 VAL 153 349 349 VAL VAL C . n C 2 154 ILE 154 350 350 ILE ILE C . n C 2 155 GLU 155 351 351 GLU GLU C . n C 2 156 GLU 156 352 352 GLU GLU C . n C 2 157 ALA 157 353 353 ALA ALA C . n C 2 158 THR 158 354 354 THR THR C . n C 2 159 ARG 159 355 355 ARG ARG C . n C 2 160 ASN 160 356 356 ASN ASN C . n C 2 161 GLN 161 357 357 GLN GLN C . n C 2 162 VAL 162 358 358 VAL VAL C . n C 2 163 ALA 163 359 359 ALA ALA C . n C 2 164 LEU 164 360 360 LEU LEU C . n C 2 165 GLU 165 361 361 GLU GLU C . n C 2 166 LYS 166 362 362 LYS LYS C . n C 2 167 THR 167 363 363 THR THR C . n C 2 168 ASP 168 364 364 ASP ASP C . n C 2 169 LYS 169 365 365 LYS LYS C . n C 2 170 LEU 170 366 366 LEU LEU C . n C 2 171 ASP 171 367 367 ASP ASP C . n C 2 172 MET 172 368 368 MET MET C . n C 2 173 ASN 173 369 369 ASN ASN C . n C 2 174 ALA 174 370 370 ALA ALA C . n C 2 175 LYS 175 371 371 LYS LYS C . n C 2 176 ARG 176 372 372 ARG ARG C . n C 2 177 GLN 177 373 373 GLN GLN C . n C 2 178 LEU 178 374 374 LEU LEU C . n C 2 179 TYR 179 375 375 TYR TYR C . n C 2 180 SER 180 376 376 SER SER C . n C 2 181 LEU 181 377 377 LEU LEU C . n C 2 182 ILE 182 378 378 ILE ILE C . n C 2 183 GLY 183 379 379 GLY GLY C . n C 2 184 TYR 184 380 380 TYR TYR C . n C 2 185 ALA 185 381 381 ALA ALA C . n C 2 186 SER 186 382 382 SER SER C . n C 2 187 LEU 187 383 383 LEU LEU C . n C 2 188 ARG 188 384 384 ARG ARG C . n C 2 189 LEU 189 385 385 LEU LEU C . n C 2 190 HIS 190 386 386 HIS HIS C . n C 2 191 TYR 191 387 387 TYR TYR C . n C 2 192 VAL 192 388 388 VAL VAL C . n C 2 193 THR 193 389 389 THR THR C . n C 2 194 VAL 194 390 390 VAL VAL C . n C 2 195 LYS 195 391 391 LYS LYS C . n C 2 196 LYS 196 392 392 LYS LYS C . n C 2 197 PRO 197 393 393 PRO PRO C . n C 2 198 THR 198 394 394 THR THR C . n C 2 199 ALA 199 395 395 ALA ALA C . n C 2 200 VAL 200 396 396 VAL VAL C . n C 2 201 ASP 201 397 397 ASP ASP C . n C 2 202 PRO 202 398 398 PRO PRO C . n C 2 203 ASN 203 399 399 ASN ASN C . n C 2 204 SER 204 400 400 SER SER C . n C 2 205 ILE 205 401 401 ILE ILE C . n C 2 206 VAL 206 402 402 VAL VAL C . n C 2 207 GLU 207 403 403 GLU GLU C . n C 2 208 CYS 208 404 404 CYS CYS C . n C 2 209 ARG 209 405 405 ARG ARG C . n C 2 210 VAL 210 406 406 VAL VAL C . n C 2 211 GLY 211 407 407 GLY GLY C . n C 2 212 ASP 212 408 408 ASP ASP C . n C 2 213 GLY 213 409 409 GLY GLY C . n C 2 214 THR 214 410 410 THR THR C . n C 2 215 VAL 215 411 411 VAL VAL C . n C 2 216 LEU 216 412 412 LEU LEU C . n C 2 217 GLY 217 413 413 GLY GLY C . n C 2 218 THR 218 414 414 THR THR C . n C 2 219 GLY 219 415 415 GLY GLY C . n C 2 220 VAL 220 416 416 VAL VAL C . n C 2 221 GLY 221 417 417 GLY GLY C . n C 2 222 ARG 222 418 418 ARG ARG C . n C 2 223 ASN 223 419 419 ASN ASN C . n C 2 224 ILE 224 420 420 ILE ILE C . n C 2 225 LYS 225 421 421 LYS LYS C . n C 2 226 ILE 226 422 422 ILE ILE C . n C 2 227 ALA 227 423 423 ALA ALA C . n C 2 228 GLY 228 424 424 GLY GLY C . n C 2 229 ILE 229 425 425 ILE ILE C . n C 2 230 ARG 230 426 426 ARG ARG C . n C 2 231 ALA 231 427 427 ALA ALA C . n C 2 232 ALA 232 428 428 ALA ALA C . n C 2 233 GLU 233 429 429 GLU GLU C . n C 2 234 ASN 234 430 430 ASN ASN C . n C 2 235 ALA 235 431 431 ALA ALA C . n C 2 236 LEU 236 432 432 LEU LEU C . n C 2 237 ARG 237 433 433 ARG ARG C . n C 2 238 ASP 238 434 434 ASP ASP C . n C 2 239 LYS 239 435 435 LYS LYS C . n C 2 240 LYS 240 436 436 LYS LYS C . n C 2 241 MET 241 437 437 MET MET C . n C 2 242 LEU 242 438 438 LEU LEU C . n C 2 243 ASP 243 439 439 ASP ASP C . n C 2 244 PHE 244 440 440 PHE PHE C . n C 2 245 TYR 245 441 441 TYR TYR C . n C 2 246 ALA 246 442 442 ALA ALA C . n C 2 247 LYS 247 443 443 LYS LYS C . n C 2 248 GLN 248 444 444 GLN GLN C . n C 2 249 ARG 249 445 445 ARG ARG C . n C 2 250 ALA 250 446 446 ALA ALA C . n C 2 251 ALA 251 447 447 ALA ALA C . n C 2 252 ILE 252 448 448 ILE ILE C . n C 2 253 PRO 253 449 449 PRO PRO C . n C 2 254 ARG 254 450 450 ARG ARG C . n C 2 255 SER 255 451 451 SER SER C . n C 2 256 GLU 256 452 452 GLU GLU C . n C 2 257 SER 257 453 453 SER SER C . n C 2 258 VAL 258 454 454 VAL VAL C . n C 2 259 LEU 259 455 455 LEU LEU C . n C 2 260 LYS 260 456 456 LYS LYS C . n C 2 261 ASP 261 457 457 ASP ASP C . n D 3 1 C 1 1 1 C C D . n D 3 2 A 2 2 2 A A D . n D 3 3 U 3 3 3 U U D . n D 3 4 G 4 4 4 G G D . n D 3 5 U 5 5 5 U U D . n D 3 6 C 6 6 6 C C D . n D 3 7 A 7 7 7 A A D . n D 3 8 U 8 8 8 U U D . n D 3 9 G 9 9 9 G G D . n D 3 10 U 10 10 10 U U D . n D 3 11 C 11 11 11 C C D . n D 3 12 A 12 12 12 A A D . n D 3 13 U 13 13 13 U U D . n D 3 14 G 14 14 14 G G D . n D 3 15 A 15 15 15 A A D . n D 3 16 G 16 16 16 G G D . n D 3 17 U 17 17 17 U U D . n D 3 18 C 18 18 18 C C D . n D 3 19 C 19 19 19 C C D . n D 3 20 A 20 20 20 A A D . n D 3 21 U 21 21 21 U U D . n D 3 22 G 22 22 22 G G D . n D 3 23 G 23 23 23 G G D . n D 3 24 C 24 24 24 C C D . n D 3 25 A 25 25 25 A A D . n D 3 26 U 26 26 26 U U D . n D 3 27 G 27 27 27 G G D . n D 3 28 G 28 28 28 G G D . n D 3 29 C 29 29 29 C C D . n D 3 30 A 30 30 30 A A D . n D 3 31 U 31 31 31 U U D . n D 3 32 G 32 32 32 G G D . n D 3 33 G 33 33 33 G G D . n D 3 34 C 34 34 34 C C D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 MG 1 601 601 MG MG C . F 4 MG 1 602 602 MG MG C . G 4 MG 1 603 603 MG MG C . H 4 MG 1 101 604 MG MG D . I 5 HOH 1 201 20 HOH HOH A . J 5 HOH 1 201 9 HOH HOH B . J 5 HOH 2 202 87 HOH HOH B . J 5 HOH 3 203 89 HOH HOH B . J 5 HOH 4 204 93 HOH HOH B . J 5 HOH 5 205 96 HOH HOH B . J 5 HOH 6 206 97 HOH HOH B . K 5 HOH 1 701 1 HOH HOH C . K 5 HOH 2 702 2 HOH HOH C . K 5 HOH 3 703 3 HOH HOH C . K 5 HOH 4 704 4 HOH HOH C . K 5 HOH 5 705 5 HOH HOH C . K 5 HOH 6 706 6 HOH HOH C . K 5 HOH 7 707 7 HOH HOH C . K 5 HOH 8 708 8 HOH HOH C . K 5 HOH 9 709 14 HOH HOH C . K 5 HOH 10 710 15 HOH HOH C . K 5 HOH 11 711 19 HOH HOH C . K 5 HOH 12 712 21 HOH HOH C . K 5 HOH 13 713 22 HOH HOH C . K 5 HOH 14 714 23 HOH HOH C . K 5 HOH 15 715 24 HOH HOH C . K 5 HOH 16 716 25 HOH HOH C . K 5 HOH 17 717 26 HOH HOH C . K 5 HOH 18 718 29 HOH HOH C . K 5 HOH 19 719 31 HOH HOH C . K 5 HOH 20 720 35 HOH HOH C . K 5 HOH 21 721 37 HOH HOH C . K 5 HOH 22 722 43 HOH HOH C . K 5 HOH 23 723 44 HOH HOH C . K 5 HOH 24 724 45 HOH HOH C . K 5 HOH 25 725 46 HOH HOH C . K 5 HOH 26 726 58 HOH HOH C . K 5 HOH 27 727 61 HOH HOH C . K 5 HOH 28 728 63 HOH HOH C . K 5 HOH 29 729 64 HOH HOH C . K 5 HOH 30 730 65 HOH HOH C . K 5 HOH 31 731 67 HOH HOH C . K 5 HOH 32 732 70 HOH HOH C . K 5 HOH 33 733 74 HOH HOH C . K 5 HOH 34 734 76 HOH HOH C . K 5 HOH 35 735 79 HOH HOH C . K 5 HOH 36 736 80 HOH HOH C . K 5 HOH 37 737 81 HOH HOH C . K 5 HOH 38 738 82 HOH HOH C . K 5 HOH 39 739 83 HOH HOH C . K 5 HOH 40 740 84 HOH HOH C . K 5 HOH 41 741 85 HOH HOH C . K 5 HOH 42 742 86 HOH HOH C . K 5 HOH 43 743 94 HOH HOH C . K 5 HOH 44 744 95 HOH HOH C . L 5 HOH 1 201 10 HOH HOH D . L 5 HOH 2 202 11 HOH HOH D . L 5 HOH 3 203 12 HOH HOH D . L 5 HOH 4 204 13 HOH HOH D . L 5 HOH 5 205 16 HOH HOH D . L 5 HOH 6 206 17 HOH HOH D . L 5 HOH 7 207 18 HOH HOH D . L 5 HOH 8 208 27 HOH HOH D . L 5 HOH 9 209 28 HOH HOH D . L 5 HOH 10 210 30 HOH HOH D . L 5 HOH 11 211 32 HOH HOH D . L 5 HOH 12 212 33 HOH HOH D . L 5 HOH 13 213 34 HOH HOH D . L 5 HOH 14 214 36 HOH HOH D . L 5 HOH 15 215 38 HOH HOH D . L 5 HOH 16 216 39 HOH HOH D . L 5 HOH 17 217 40 HOH HOH D . L 5 HOH 18 218 41 HOH HOH D . L 5 HOH 19 219 42 HOH HOH D . L 5 HOH 20 220 47 HOH HOH D . L 5 HOH 21 221 48 HOH HOH D . L 5 HOH 22 222 49 HOH HOH D . L 5 HOH 23 223 50 HOH HOH D . L 5 HOH 24 224 51 HOH HOH D . L 5 HOH 25 225 52 HOH HOH D . L 5 HOH 26 226 53 HOH HOH D . L 5 HOH 27 227 54 HOH HOH D . L 5 HOH 28 228 55 HOH HOH D . L 5 HOH 29 229 56 HOH HOH D . L 5 HOH 30 230 57 HOH HOH D . L 5 HOH 31 231 59 HOH HOH D . L 5 HOH 32 232 60 HOH HOH D . L 5 HOH 33 233 62 HOH HOH D . L 5 HOH 34 234 66 HOH HOH D . L 5 HOH 35 235 68 HOH HOH D . L 5 HOH 36 236 69 HOH HOH D . L 5 HOH 37 237 71 HOH HOH D . L 5 HOH 38 238 72 HOH HOH D . L 5 HOH 39 239 73 HOH HOH D . L 5 HOH 40 240 75 HOH HOH D . L 5 HOH 41 241 77 HOH HOH D . L 5 HOH 42 242 78 HOH HOH D . L 5 HOH 43 243 88 HOH HOH D . L 5 HOH 44 244 90 HOH HOH D . L 5 HOH 45 245 91 HOH HOH D . L 5 HOH 46 246 92 HOH HOH D . L 5 HOH 47 247 98 HOH HOH D . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 31080 ? 1 MORE -325 ? 1 'SSA (A^2)' 51400 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 3_555 -x,y,-z+1/2 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 30.6445000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OE1 ? C GLU 42 ? C GLU 238 ? 1_555 MG ? G MG . ? C MG 603 ? 1_555 OE1 ? C GLU 45 ? C GLU 241 ? 1_555 94.1 ? 2 OE1 ? C GLU 42 ? C GLU 238 ? 1_555 MG ? G MG . ? C MG 603 ? 1_555 O ? K HOH . ? C HOH 705 ? 1_555 87.2 ? 3 OE1 ? C GLU 45 ? C GLU 241 ? 1_555 MG ? G MG . ? C MG 603 ? 1_555 O ? K HOH . ? C HOH 705 ? 1_555 83.6 ? 4 OE1 ? C GLU 42 ? C GLU 238 ? 1_555 MG ? G MG . ? C MG 603 ? 1_555 O ? K HOH . ? C HOH 706 ? 1_555 94.6 ? 5 OE1 ? C GLU 45 ? C GLU 241 ? 1_555 MG ? G MG . ? C MG 603 ? 1_555 O ? K HOH . ? C HOH 706 ? 1_555 99.2 ? 6 O ? K HOH . ? C HOH 705 ? 1_555 MG ? G MG . ? C MG 603 ? 1_555 O ? K HOH . ? C HOH 706 ? 1_555 176.6 ? 7 OE1 ? C GLU 42 ? C GLU 238 ? 1_555 MG ? G MG . ? C MG 603 ? 1_555 O ? K HOH . ? C HOH 707 ? 1_555 100.5 ? 8 OE1 ? C GLU 45 ? C GLU 241 ? 1_555 MG ? G MG . ? C MG 603 ? 1_555 O ? K HOH . ? C HOH 707 ? 1_555 165.4 ? 9 O ? K HOH . ? C HOH 705 ? 1_555 MG ? G MG . ? C MG 603 ? 1_555 O ? K HOH . ? C HOH 707 ? 1_555 97.4 ? 10 O ? K HOH . ? C HOH 706 ? 1_555 MG ? G MG . ? C MG 603 ? 1_555 O ? K HOH . ? C HOH 707 ? 1_555 79.5 ? 11 OE1 ? C GLU 42 ? C GLU 238 ? 1_555 MG ? G MG . ? C MG 603 ? 1_555 O ? K HOH . ? C HOH 708 ? 1_555 169.9 ? 12 OE1 ? C GLU 45 ? C GLU 241 ? 1_555 MG ? G MG . ? C MG 603 ? 1_555 O ? K HOH . ? C HOH 708 ? 1_555 87.1 ? 13 O ? K HOH . ? C HOH 705 ? 1_555 MG ? G MG . ? C MG 603 ? 1_555 O ? K HOH . ? C HOH 708 ? 1_555 102.9 ? 14 O ? K HOH . ? C HOH 706 ? 1_555 MG ? G MG . ? C MG 603 ? 1_555 O ? K HOH . ? C HOH 708 ? 1_555 75.3 ? 15 O ? K HOH . ? C HOH 707 ? 1_555 MG ? G MG . ? C MG 603 ? 1_555 O ? K HOH . ? C HOH 708 ? 1_555 78.5 ? 16 OE2 ? C GLU 45 ? C GLU 241 ? 1_555 MG ? F MG . ? C MG 602 ? 1_555 OE1 ? C GLU 124 ? C GLU 320 ? 1_555 101.6 ? 17 OE2 ? C GLU 45 ? C GLU 241 ? 1_555 MG ? F MG . ? C MG 602 ? 1_555 O ? K HOH . ? C HOH 703 ? 1_555 93.3 ? 18 OE1 ? C GLU 124 ? C GLU 320 ? 1_555 MG ? F MG . ? C MG 602 ? 1_555 O ? K HOH . ? C HOH 703 ? 1_555 87.1 ? 19 OE2 ? C GLU 45 ? C GLU 241 ? 1_555 MG ? F MG . ? C MG 602 ? 1_555 O ? K HOH . ? C HOH 704 ? 1_555 81.7 ? 20 OE1 ? C GLU 124 ? C GLU 320 ? 1_555 MG ? F MG . ? C MG 602 ? 1_555 O ? K HOH . ? C HOH 704 ? 1_555 75.2 ? 21 O ? K HOH . ? C HOH 703 ? 1_555 MG ? F MG . ? C MG 602 ? 1_555 O ? K HOH . ? C HOH 704 ? 1_555 160.1 ? 22 OD2 ? C ASP 49 ? C ASP 245 ? 1_555 MG ? E MG . ? C MG 601 ? 1_555 OE2 ? C GLU 124 ? C GLU 320 ? 1_555 92.8 ? 23 OD2 ? C ASP 49 ? C ASP 245 ? 1_555 MG ? E MG . ? C MG 601 ? 1_555 O ? K HOH . ? C HOH 701 ? 1_555 76.1 ? 24 OE2 ? C GLU 124 ? C GLU 320 ? 1_555 MG ? E MG . ? C MG 601 ? 1_555 O ? K HOH . ? C HOH 701 ? 1_555 95.9 ? 25 OD2 ? C ASP 49 ? C ASP 245 ? 1_555 MG ? E MG . ? C MG 601 ? 1_555 O ? K HOH . ? C HOH 702 ? 1_555 154.9 ? 26 OE2 ? C GLU 124 ? C GLU 320 ? 1_555 MG ? E MG . ? C MG 601 ? 1_555 O ? K HOH . ? C HOH 702 ? 1_555 92.6 ? 27 O ? K HOH . ? C HOH 701 ? 1_555 MG ? E MG . ? C MG 601 ? 1_555 O ? K HOH . ? C HOH 702 ? 1_555 79.0 ? 28 OD2 ? C ASP 49 ? C ASP 245 ? 1_555 MG ? E MG . ? C MG 601 ? 1_555 "O3'" ? D C 34 ? D C 34 ? 1_555 86.3 ? 29 OE2 ? C GLU 124 ? C GLU 320 ? 1_555 MG ? E MG . ? C MG 601 ? 1_555 "O3'" ? D C 34 ? D C 34 ? 1_555 178.8 ? 30 O ? K HOH . ? C HOH 701 ? 1_555 MG ? E MG . ? C MG 601 ? 1_555 "O3'" ? D C 34 ? D C 34 ? 1_555 83.3 ? 31 O ? K HOH . ? C HOH 702 ? 1_555 MG ? E MG . ? C MG 601 ? 1_555 "O3'" ? D C 34 ? D C 34 ? 1_555 88.0 ? 32 O6 ? D G 27 ? D G 27 ? 1_555 MG ? H MG . ? D MG 101 ? 1_555 O ? L HOH . ? D HOH 226 ? 1_555 88.2 ? 33 O6 ? D G 27 ? D G 27 ? 1_555 MG ? H MG . ? D MG 101 ? 1_555 O ? L HOH . ? D HOH 227 ? 1_555 103.7 ? 34 O ? L HOH . ? D HOH 226 ? 1_555 MG ? H MG . ? D MG 101 ? 1_555 O ? L HOH . ? D HOH 227 ? 1_555 166.2 ? 35 O6 ? D G 27 ? D G 27 ? 1_555 MG ? H MG . ? D MG 101 ? 1_555 O ? L HOH . ? D HOH 228 ? 1_555 160.2 ? 36 O ? L HOH . ? D HOH 226 ? 1_555 MG ? H MG . ? D MG 101 ? 1_555 O ? L HOH . ? D HOH 228 ? 1_555 86.7 ? 37 O ? L HOH . ? D HOH 227 ? 1_555 MG ? H MG . ? D MG 101 ? 1_555 O ? L HOH . ? D HOH 228 ? 1_555 79.8 ? 38 O6 ? D G 27 ? D G 27 ? 1_555 MG ? H MG . ? D MG 101 ? 1_555 O ? L HOH . ? D HOH 229 ? 1_555 96.6 ? 39 O ? L HOH . ? D HOH 226 ? 1_555 MG ? H MG . ? D MG 101 ? 1_555 O ? L HOH . ? D HOH 229 ? 1_555 91.2 ? 40 O ? L HOH . ? D HOH 227 ? 1_555 MG ? H MG . ? D MG 101 ? 1_555 O ? L HOH . ? D HOH 229 ? 1_555 94.2 ? 41 O ? L HOH . ? D HOH 228 ? 1_555 MG ? H MG . ? D MG 101 ? 1_555 O ? L HOH . ? D HOH 229 ? 1_555 102.6 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-04-16 2 'Structure model' 1 1 2014-05-28 3 'Structure model' 1 2 2023-08-30 4 'Structure model' 1 3 2023-09-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Structure summary' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' audit_author 2 3 'Structure model' chem_comp_atom 3 3 'Structure model' chem_comp_bond 4 3 'Structure model' citation_author 5 3 'Structure model' database_2 6 3 'Structure model' pdbx_struct_conn_angle 7 3 'Structure model' struct_conn 8 3 'Structure model' struct_site 9 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_audit_author.identifier_ORCID' 2 3 'Structure model' '_citation_author.identifier_ORCID' 3 3 'Structure model' '_database_2.pdbx_DOI' 4 3 'Structure model' '_database_2.pdbx_database_accession' 5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 10 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 11 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 12 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id' 13 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 14 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 15 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 16 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 17 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 18 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 19 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 20 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 21 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 22 3 'Structure model' '_pdbx_struct_conn_angle.value' 23 3 'Structure model' '_struct_conn.pdbx_dist_value' 24 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 25 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 26 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 27 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 28 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 29 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 30 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 31 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 32 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 33 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 34 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 35 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 36 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 37 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' 38 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 39 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 40 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 2 PHENIX 1.7.3_928 ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 3 PDB_EXTRACT 3.11 'April 22, 2011' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 4 SERGUI . ? ? ? ? 'data collection' ? ? ? 5 XDS . ? ? ? ? 'data reduction' ? ? ? 6 PHENIX . ? ? ? ? phasing ? ? ? # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 P _pdbx_validate_rmsd_bond.auth_asym_id_1 D _pdbx_validate_rmsd_bond.auth_comp_id_1 C _pdbx_validate_rmsd_bond.auth_seq_id_1 1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 OP3 _pdbx_validate_rmsd_bond.auth_asym_id_2 D _pdbx_validate_rmsd_bond.auth_comp_id_2 C _pdbx_validate_rmsd_bond.auth_seq_id_2 1 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.480 _pdbx_validate_rmsd_bond.bond_target_value 1.607 _pdbx_validate_rmsd_bond.bond_deviation -0.127 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.012 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TYR A 44 ? ? 57.09 71.61 2 1 ASP A 84 ? ? -138.58 -65.18 3 1 ALA A 115 ? ? 56.39 -116.78 4 1 ILE A 135 ? ? 65.48 -4.60 5 1 TYR B 44 ? ? 59.59 71.18 6 1 ALA B 115 ? ? 58.51 -119.75 7 1 ILE B 135 ? ? 64.38 -8.12 8 1 LEU B 150 ? ? -74.19 -70.17 9 1 ALA C 235 ? ? -90.62 -62.25 10 1 HIS C 291 ? ? 46.39 -115.89 11 1 ASP C 302 ? ? 64.06 74.55 12 1 ARG C 332 ? ? -57.74 -70.40 13 1 LYS C 365 ? ? 66.01 -9.36 14 1 ILE C 378 ? ? -121.19 -59.38 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 PHE _pdbx_validate_peptide_omega.auth_asym_id_1 C _pdbx_validate_peptide_omega.auth_seq_id_1 290 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 HIS _pdbx_validate_peptide_omega.auth_asym_id_2 C _pdbx_validate_peptide_omega.auth_seq_id_2 291 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega 129.11 # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id SER _pdbx_unobs_or_zero_occ_residues.auth_seq_id 42 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id SER _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 C OP3 O N N 111 C P P N N 112 C OP1 O N N 113 C OP2 O N N 114 C "O5'" O N N 115 C "C5'" C N N 116 C "C4'" C N R 117 C "O4'" O N N 118 C "C3'" C N S 119 C "O3'" O N N 120 C "C2'" C N R 121 C "O2'" O N N 122 C "C1'" C N R 123 C N1 N N N 124 C C2 C N N 125 C O2 O N N 126 C N3 N N N 127 C C4 C N N 128 C N4 N N N 129 C C5 C N N 130 C C6 C N N 131 C HOP3 H N N 132 C HOP2 H N N 133 C "H5'" H N N 134 C "H5''" H N N 135 C "H4'" H N N 136 C "H3'" H N N 137 C "HO3'" H N N 138 C "H2'" H N N 139 C "HO2'" H N N 140 C "H1'" H N N 141 C H41 H N N 142 C H42 H N N 143 C H5 H N N 144 C H6 H N N 145 CYS N N N N 146 CYS CA C N R 147 CYS C C N N 148 CYS O O N N 149 CYS CB C N N 150 CYS SG S N N 151 CYS OXT O N N 152 CYS H H N N 153 CYS H2 H N N 154 CYS HA H N N 155 CYS HB2 H N N 156 CYS HB3 H N N 157 CYS HG H N N 158 CYS HXT H N N 159 G OP3 O N N 160 G P P N N 161 G OP1 O N N 162 G OP2 O N N 163 G "O5'" O N N 164 G "C5'" C N N 165 G "C4'" C N R 166 G "O4'" O N N 167 G "C3'" C N S 168 G "O3'" O N N 169 G "C2'" C N R 170 G "O2'" O N N 171 G "C1'" C N R 172 G N9 N Y N 173 G C8 C Y N 174 G N7 N Y N 175 G C5 C Y N 176 G C6 C N N 177 G O6 O N N 178 G N1 N N N 179 G C2 C N N 180 G N2 N N N 181 G N3 N N N 182 G C4 C Y N 183 G HOP3 H N N 184 G HOP2 H N N 185 G "H5'" H N N 186 G "H5''" H N N 187 G "H4'" H N N 188 G "H3'" H N N 189 G "HO3'" H N N 190 G "H2'" H N N 191 G "HO2'" H N N 192 G "H1'" H N N 193 G H8 H N N 194 G H1 H N N 195 G H21 H N N 196 G H22 H N N 197 GLN N N N N 198 GLN CA C N S 199 GLN C C N N 200 GLN O O N N 201 GLN CB C N N 202 GLN CG C N N 203 GLN CD C N N 204 GLN OE1 O N N 205 GLN NE2 N N N 206 GLN OXT O N N 207 GLN H H N N 208 GLN H2 H N N 209 GLN HA H N N 210 GLN HB2 H N N 211 GLN HB3 H N N 212 GLN HG2 H N N 213 GLN HG3 H N N 214 GLN HE21 H N N 215 GLN HE22 H N N 216 GLN HXT H N N 217 GLU N N N N 218 GLU CA C N S 219 GLU C C N N 220 GLU O O N N 221 GLU CB C N N 222 GLU CG C N N 223 GLU CD C N N 224 GLU OE1 O N N 225 GLU OE2 O N N 226 GLU OXT O N N 227 GLU H H N N 228 GLU H2 H N N 229 GLU HA H N N 230 GLU HB2 H N N 231 GLU HB3 H N N 232 GLU HG2 H N N 233 GLU HG3 H N N 234 GLU HE2 H N N 235 GLU HXT H N N 236 GLY N N N N 237 GLY CA C N N 238 GLY C C N N 239 GLY O O N N 240 GLY OXT O N N 241 GLY H H N N 242 GLY H2 H N N 243 GLY HA2 H N N 244 GLY HA3 H N N 245 GLY HXT H N N 246 HIS N N N N 247 HIS CA C N S 248 HIS C C N N 249 HIS O O N N 250 HIS CB C N N 251 HIS CG C Y N 252 HIS ND1 N Y N 253 HIS CD2 C Y N 254 HIS CE1 C Y N 255 HIS NE2 N Y N 256 HIS OXT O N N 257 HIS H H N N 258 HIS H2 H N N 259 HIS HA H N N 260 HIS HB2 H N N 261 HIS HB3 H N N 262 HIS HD1 H N N 263 HIS HD2 H N N 264 HIS HE1 H N N 265 HIS HE2 H N N 266 HIS HXT H N N 267 HOH O O N N 268 HOH H1 H N N 269 HOH H2 H N N 270 ILE N N N N 271 ILE CA C N S 272 ILE C C N N 273 ILE O O N N 274 ILE CB C N S 275 ILE CG1 C N N 276 ILE CG2 C N N 277 ILE CD1 C N N 278 ILE OXT O N N 279 ILE H H N N 280 ILE H2 H N N 281 ILE HA H N N 282 ILE HB H N N 283 ILE HG12 H N N 284 ILE HG13 H N N 285 ILE HG21 H N N 286 ILE HG22 H N N 287 ILE HG23 H N N 288 ILE HD11 H N N 289 ILE HD12 H N N 290 ILE HD13 H N N 291 ILE HXT H N N 292 LEU N N N N 293 LEU CA C N S 294 LEU C C N N 295 LEU O O N N 296 LEU CB C N N 297 LEU CG C N N 298 LEU CD1 C N N 299 LEU CD2 C N N 300 LEU OXT O N N 301 LEU H H N N 302 LEU H2 H N N 303 LEU HA H N N 304 LEU HB2 H N N 305 LEU HB3 H N N 306 LEU HG H N N 307 LEU HD11 H N N 308 LEU HD12 H N N 309 LEU HD13 H N N 310 LEU HD21 H N N 311 LEU HD22 H N N 312 LEU HD23 H N N 313 LEU HXT H N N 314 LYS N N N N 315 LYS CA C N S 316 LYS C C N N 317 LYS O O N N 318 LYS CB C N N 319 LYS CG C N N 320 LYS CD C N N 321 LYS CE C N N 322 LYS NZ N N N 323 LYS OXT O N N 324 LYS H H N N 325 LYS H2 H N N 326 LYS HA H N N 327 LYS HB2 H N N 328 LYS HB3 H N N 329 LYS HG2 H N N 330 LYS HG3 H N N 331 LYS HD2 H N N 332 LYS HD3 H N N 333 LYS HE2 H N N 334 LYS HE3 H N N 335 LYS HZ1 H N N 336 LYS HZ2 H N N 337 LYS HZ3 H N N 338 LYS HXT H N N 339 MET N N N N 340 MET CA C N S 341 MET C C N N 342 MET O O N N 343 MET CB C N N 344 MET CG C N N 345 MET SD S N N 346 MET CE C N N 347 MET OXT O N N 348 MET H H N N 349 MET H2 H N N 350 MET HA H N N 351 MET HB2 H N N 352 MET HB3 H N N 353 MET HG2 H N N 354 MET HG3 H N N 355 MET HE1 H N N 356 MET HE2 H N N 357 MET HE3 H N N 358 MET HXT H N N 359 MG MG MG N N 360 PHE N N N N 361 PHE CA C N S 362 PHE C C N N 363 PHE O O N N 364 PHE CB C N N 365 PHE CG C Y N 366 PHE CD1 C Y N 367 PHE CD2 C Y N 368 PHE CE1 C Y N 369 PHE CE2 C Y N 370 PHE CZ C Y N 371 PHE OXT O N N 372 PHE H H N N 373 PHE H2 H N N 374 PHE HA H N N 375 PHE HB2 H N N 376 PHE HB3 H N N 377 PHE HD1 H N N 378 PHE HD2 H N N 379 PHE HE1 H N N 380 PHE HE2 H N N 381 PHE HZ H N N 382 PHE HXT H N N 383 PRO N N N N 384 PRO CA C N S 385 PRO C C N N 386 PRO O O N N 387 PRO CB C N N 388 PRO CG C N N 389 PRO CD C N N 390 PRO OXT O N N 391 PRO H H N N 392 PRO HA H N N 393 PRO HB2 H N N 394 PRO HB3 H N N 395 PRO HG2 H N N 396 PRO HG3 H N N 397 PRO HD2 H N N 398 PRO HD3 H N N 399 PRO HXT H N N 400 SER N N N N 401 SER CA C N S 402 SER C C N N 403 SER O O N N 404 SER CB C N N 405 SER OG O N N 406 SER OXT O N N 407 SER H H N N 408 SER H2 H N N 409 SER HA H N N 410 SER HB2 H N N 411 SER HB3 H N N 412 SER HG H N N 413 SER HXT H N N 414 THR N N N N 415 THR CA C N S 416 THR C C N N 417 THR O O N N 418 THR CB C N R 419 THR OG1 O N N 420 THR CG2 C N N 421 THR OXT O N N 422 THR H H N N 423 THR H2 H N N 424 THR HA H N N 425 THR HB H N N 426 THR HG1 H N N 427 THR HG21 H N N 428 THR HG22 H N N 429 THR HG23 H N N 430 THR HXT H N N 431 TRP N N N N 432 TRP CA C N S 433 TRP C C N N 434 TRP O O N N 435 TRP CB C N N 436 TRP CG C Y N 437 TRP CD1 C Y N 438 TRP CD2 C Y N 439 TRP NE1 N Y N 440 TRP CE2 C Y N 441 TRP CE3 C Y N 442 TRP CZ2 C Y N 443 TRP CZ3 C Y N 444 TRP CH2 C Y N 445 TRP OXT O N N 446 TRP H H N N 447 TRP H2 H N N 448 TRP HA H N N 449 TRP HB2 H N N 450 TRP HB3 H N N 451 TRP HD1 H N N 452 TRP HE1 H N N 453 TRP HE3 H N N 454 TRP HZ2 H N N 455 TRP HZ3 H N N 456 TRP HH2 H N N 457 TRP HXT H N N 458 TYR N N N N 459 TYR CA C N S 460 TYR C C N N 461 TYR O O N N 462 TYR CB C N N 463 TYR CG C Y N 464 TYR CD1 C Y N 465 TYR CD2 C Y N 466 TYR CE1 C Y N 467 TYR CE2 C Y N 468 TYR CZ C Y N 469 TYR OH O N N 470 TYR OXT O N N 471 TYR H H N N 472 TYR H2 H N N 473 TYR HA H N N 474 TYR HB2 H N N 475 TYR HB3 H N N 476 TYR HD1 H N N 477 TYR HD2 H N N 478 TYR HE1 H N N 479 TYR HE2 H N N 480 TYR HH H N N 481 TYR HXT H N N 482 U OP3 O N N 483 U P P N N 484 U OP1 O N N 485 U OP2 O N N 486 U "O5'" O N N 487 U "C5'" C N N 488 U "C4'" C N R 489 U "O4'" O N N 490 U "C3'" C N S 491 U "O3'" O N N 492 U "C2'" C N R 493 U "O2'" O N N 494 U "C1'" C N R 495 U N1 N N N 496 U C2 C N N 497 U O2 O N N 498 U N3 N N N 499 U C4 C N N 500 U O4 O N N 501 U C5 C N N 502 U C6 C N N 503 U HOP3 H N N 504 U HOP2 H N N 505 U "H5'" H N N 506 U "H5''" H N N 507 U "H4'" H N N 508 U "H3'" H N N 509 U "HO3'" H N N 510 U "H2'" H N N 511 U "HO2'" H N N 512 U "H1'" H N N 513 U H3 H N N 514 U H5 H N N 515 U H6 H N N 516 VAL N N N N 517 VAL CA C N S 518 VAL C C N N 519 VAL O O N N 520 VAL CB C N N 521 VAL CG1 C N N 522 VAL CG2 C N N 523 VAL OXT O N N 524 VAL H H N N 525 VAL H2 H N N 526 VAL HA H N N 527 VAL HB H N N 528 VAL HG11 H N N 529 VAL HG12 H N N 530 VAL HG13 H N N 531 VAL HG21 H N N 532 VAL HG22 H N N 533 VAL HG23 H N N 534 VAL HXT H N N 535 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 C OP3 P sing N N 109 C OP3 HOP3 sing N N 110 C P OP1 doub N N 111 C P OP2 sing N N 112 C P "O5'" sing N N 113 C OP2 HOP2 sing N N 114 C "O5'" "C5'" sing N N 115 C "C5'" "C4'" sing N N 116 C "C5'" "H5'" sing N N 117 C "C5'" "H5''" sing N N 118 C "C4'" "O4'" sing N N 119 C "C4'" "C3'" sing N N 120 C "C4'" "H4'" sing N N 121 C "O4'" "C1'" sing N N 122 C "C3'" "O3'" sing N N 123 C "C3'" "C2'" sing N N 124 C "C3'" "H3'" sing N N 125 C "O3'" "HO3'" sing N N 126 C "C2'" "O2'" sing N N 127 C "C2'" "C1'" sing N N 128 C "C2'" "H2'" sing N N 129 C "O2'" "HO2'" sing N N 130 C "C1'" N1 sing N N 131 C "C1'" "H1'" sing N N 132 C N1 C2 sing N N 133 C N1 C6 sing N N 134 C C2 O2 doub N N 135 C C2 N3 sing N N 136 C N3 C4 doub N N 137 C C4 N4 sing N N 138 C C4 C5 sing N N 139 C N4 H41 sing N N 140 C N4 H42 sing N N 141 C C5 C6 doub N N 142 C C5 H5 sing N N 143 C C6 H6 sing N N 144 CYS N CA sing N N 145 CYS N H sing N N 146 CYS N H2 sing N N 147 CYS CA C sing N N 148 CYS CA CB sing N N 149 CYS CA HA sing N N 150 CYS C O doub N N 151 CYS C OXT sing N N 152 CYS CB SG sing N N 153 CYS CB HB2 sing N N 154 CYS CB HB3 sing N N 155 CYS SG HG sing N N 156 CYS OXT HXT sing N N 157 G OP3 P sing N N 158 G OP3 HOP3 sing N N 159 G P OP1 doub N N 160 G P OP2 sing N N 161 G P "O5'" sing N N 162 G OP2 HOP2 sing N N 163 G "O5'" "C5'" sing N N 164 G "C5'" "C4'" sing N N 165 G "C5'" "H5'" sing N N 166 G "C5'" "H5''" sing N N 167 G "C4'" "O4'" sing N N 168 G "C4'" "C3'" sing N N 169 G "C4'" "H4'" sing N N 170 G "O4'" "C1'" sing N N 171 G "C3'" "O3'" sing N N 172 G "C3'" "C2'" sing N N 173 G "C3'" "H3'" sing N N 174 G "O3'" "HO3'" sing N N 175 G "C2'" "O2'" sing N N 176 G "C2'" "C1'" sing N N 177 G "C2'" "H2'" sing N N 178 G "O2'" "HO2'" sing N N 179 G "C1'" N9 sing N N 180 G "C1'" "H1'" sing N N 181 G N9 C8 sing Y N 182 G N9 C4 sing Y N 183 G C8 N7 doub Y N 184 G C8 H8 sing N N 185 G N7 C5 sing Y N 186 G C5 C6 sing N N 187 G C5 C4 doub Y N 188 G C6 O6 doub N N 189 G C6 N1 sing N N 190 G N1 C2 sing N N 191 G N1 H1 sing N N 192 G C2 N2 sing N N 193 G C2 N3 doub N N 194 G N2 H21 sing N N 195 G N2 H22 sing N N 196 G N3 C4 sing N N 197 GLN N CA sing N N 198 GLN N H sing N N 199 GLN N H2 sing N N 200 GLN CA C sing N N 201 GLN CA CB sing N N 202 GLN CA HA sing N N 203 GLN C O doub N N 204 GLN C OXT sing N N 205 GLN CB CG sing N N 206 GLN CB HB2 sing N N 207 GLN CB HB3 sing N N 208 GLN CG CD sing N N 209 GLN CG HG2 sing N N 210 GLN CG HG3 sing N N 211 GLN CD OE1 doub N N 212 GLN CD NE2 sing N N 213 GLN NE2 HE21 sing N N 214 GLN NE2 HE22 sing N N 215 GLN OXT HXT sing N N 216 GLU N CA sing N N 217 GLU N H sing N N 218 GLU N H2 sing N N 219 GLU CA C sing N N 220 GLU CA CB sing N N 221 GLU CA HA sing N N 222 GLU C O doub N N 223 GLU C OXT sing N N 224 GLU CB CG sing N N 225 GLU CB HB2 sing N N 226 GLU CB HB3 sing N N 227 GLU CG CD sing N N 228 GLU CG HG2 sing N N 229 GLU CG HG3 sing N N 230 GLU CD OE1 doub N N 231 GLU CD OE2 sing N N 232 GLU OE2 HE2 sing N N 233 GLU OXT HXT sing N N 234 GLY N CA sing N N 235 GLY N H sing N N 236 GLY N H2 sing N N 237 GLY CA C sing N N 238 GLY CA HA2 sing N N 239 GLY CA HA3 sing N N 240 GLY C O doub N N 241 GLY C OXT sing N N 242 GLY OXT HXT sing N N 243 HIS N CA sing N N 244 HIS N H sing N N 245 HIS N H2 sing N N 246 HIS CA C sing N N 247 HIS CA CB sing N N 248 HIS CA HA sing N N 249 HIS C O doub N N 250 HIS C OXT sing N N 251 HIS CB CG sing N N 252 HIS CB HB2 sing N N 253 HIS CB HB3 sing N N 254 HIS CG ND1 sing Y N 255 HIS CG CD2 doub Y N 256 HIS ND1 CE1 doub Y N 257 HIS ND1 HD1 sing N N 258 HIS CD2 NE2 sing Y N 259 HIS CD2 HD2 sing N N 260 HIS CE1 NE2 sing Y N 261 HIS CE1 HE1 sing N N 262 HIS NE2 HE2 sing N N 263 HIS OXT HXT sing N N 264 HOH O H1 sing N N 265 HOH O H2 sing N N 266 ILE N CA sing N N 267 ILE N H sing N N 268 ILE N H2 sing N N 269 ILE CA C sing N N 270 ILE CA CB sing N N 271 ILE CA HA sing N N 272 ILE C O doub N N 273 ILE C OXT sing N N 274 ILE CB CG1 sing N N 275 ILE CB CG2 sing N N 276 ILE CB HB sing N N 277 ILE CG1 CD1 sing N N 278 ILE CG1 HG12 sing N N 279 ILE CG1 HG13 sing N N 280 ILE CG2 HG21 sing N N 281 ILE CG2 HG22 sing N N 282 ILE CG2 HG23 sing N N 283 ILE CD1 HD11 sing N N 284 ILE CD1 HD12 sing N N 285 ILE CD1 HD13 sing N N 286 ILE OXT HXT sing N N 287 LEU N CA sing N N 288 LEU N H sing N N 289 LEU N H2 sing N N 290 LEU CA C sing N N 291 LEU CA CB sing N N 292 LEU CA HA sing N N 293 LEU C O doub N N 294 LEU C OXT sing N N 295 LEU CB CG sing N N 296 LEU CB HB2 sing N N 297 LEU CB HB3 sing N N 298 LEU CG CD1 sing N N 299 LEU CG CD2 sing N N 300 LEU CG HG sing N N 301 LEU CD1 HD11 sing N N 302 LEU CD1 HD12 sing N N 303 LEU CD1 HD13 sing N N 304 LEU CD2 HD21 sing N N 305 LEU CD2 HD22 sing N N 306 LEU CD2 HD23 sing N N 307 LEU OXT HXT sing N N 308 LYS N CA sing N N 309 LYS N H sing N N 310 LYS N H2 sing N N 311 LYS CA C sing N N 312 LYS CA CB sing N N 313 LYS CA HA sing N N 314 LYS C O doub N N 315 LYS C OXT sing N N 316 LYS CB CG sing N N 317 LYS CB HB2 sing N N 318 LYS CB HB3 sing N N 319 LYS CG CD sing N N 320 LYS CG HG2 sing N N 321 LYS CG HG3 sing N N 322 LYS CD CE sing N N 323 LYS CD HD2 sing N N 324 LYS CD HD3 sing N N 325 LYS CE NZ sing N N 326 LYS CE HE2 sing N N 327 LYS CE HE3 sing N N 328 LYS NZ HZ1 sing N N 329 LYS NZ HZ2 sing N N 330 LYS NZ HZ3 sing N N 331 LYS OXT HXT sing N N 332 MET N CA sing N N 333 MET N H sing N N 334 MET N H2 sing N N 335 MET CA C sing N N 336 MET CA CB sing N N 337 MET CA HA sing N N 338 MET C O doub N N 339 MET C OXT sing N N 340 MET CB CG sing N N 341 MET CB HB2 sing N N 342 MET CB HB3 sing N N 343 MET CG SD sing N N 344 MET CG HG2 sing N N 345 MET CG HG3 sing N N 346 MET SD CE sing N N 347 MET CE HE1 sing N N 348 MET CE HE2 sing N N 349 MET CE HE3 sing N N 350 MET OXT HXT sing N N 351 PHE N CA sing N N 352 PHE N H sing N N 353 PHE N H2 sing N N 354 PHE CA C sing N N 355 PHE CA CB sing N N 356 PHE CA HA sing N N 357 PHE C O doub N N 358 PHE C OXT sing N N 359 PHE CB CG sing N N 360 PHE CB HB2 sing N N 361 PHE CB HB3 sing N N 362 PHE CG CD1 doub Y N 363 PHE CG CD2 sing Y N 364 PHE CD1 CE1 sing Y N 365 PHE CD1 HD1 sing N N 366 PHE CD2 CE2 doub Y N 367 PHE CD2 HD2 sing N N 368 PHE CE1 CZ doub Y N 369 PHE CE1 HE1 sing N N 370 PHE CE2 CZ sing Y N 371 PHE CE2 HE2 sing N N 372 PHE CZ HZ sing N N 373 PHE OXT HXT sing N N 374 PRO N CA sing N N 375 PRO N CD sing N N 376 PRO N H sing N N 377 PRO CA C sing N N 378 PRO CA CB sing N N 379 PRO CA HA sing N N 380 PRO C O doub N N 381 PRO C OXT sing N N 382 PRO CB CG sing N N 383 PRO CB HB2 sing N N 384 PRO CB HB3 sing N N 385 PRO CG CD sing N N 386 PRO CG HG2 sing N N 387 PRO CG HG3 sing N N 388 PRO CD HD2 sing N N 389 PRO CD HD3 sing N N 390 PRO OXT HXT sing N N 391 SER N CA sing N N 392 SER N H sing N N 393 SER N H2 sing N N 394 SER CA C sing N N 395 SER CA CB sing N N 396 SER CA HA sing N N 397 SER C O doub N N 398 SER C OXT sing N N 399 SER CB OG sing N N 400 SER CB HB2 sing N N 401 SER CB HB3 sing N N 402 SER OG HG sing N N 403 SER OXT HXT sing N N 404 THR N CA sing N N 405 THR N H sing N N 406 THR N H2 sing N N 407 THR CA C sing N N 408 THR CA CB sing N N 409 THR CA HA sing N N 410 THR C O doub N N 411 THR C OXT sing N N 412 THR CB OG1 sing N N 413 THR CB CG2 sing N N 414 THR CB HB sing N N 415 THR OG1 HG1 sing N N 416 THR CG2 HG21 sing N N 417 THR CG2 HG22 sing N N 418 THR CG2 HG23 sing N N 419 THR OXT HXT sing N N 420 TRP N CA sing N N 421 TRP N H sing N N 422 TRP N H2 sing N N 423 TRP CA C sing N N 424 TRP CA CB sing N N 425 TRP CA HA sing N N 426 TRP C O doub N N 427 TRP C OXT sing N N 428 TRP CB CG sing N N 429 TRP CB HB2 sing N N 430 TRP CB HB3 sing N N 431 TRP CG CD1 doub Y N 432 TRP CG CD2 sing Y N 433 TRP CD1 NE1 sing Y N 434 TRP CD1 HD1 sing N N 435 TRP CD2 CE2 doub Y N 436 TRP CD2 CE3 sing Y N 437 TRP NE1 CE2 sing Y N 438 TRP NE1 HE1 sing N N 439 TRP CE2 CZ2 sing Y N 440 TRP CE3 CZ3 doub Y N 441 TRP CE3 HE3 sing N N 442 TRP CZ2 CH2 doub Y N 443 TRP CZ2 HZ2 sing N N 444 TRP CZ3 CH2 sing Y N 445 TRP CZ3 HZ3 sing N N 446 TRP CH2 HH2 sing N N 447 TRP OXT HXT sing N N 448 TYR N CA sing N N 449 TYR N H sing N N 450 TYR N H2 sing N N 451 TYR CA C sing N N 452 TYR CA CB sing N N 453 TYR CA HA sing N N 454 TYR C O doub N N 455 TYR C OXT sing N N 456 TYR CB CG sing N N 457 TYR CB HB2 sing N N 458 TYR CB HB3 sing N N 459 TYR CG CD1 doub Y N 460 TYR CG CD2 sing Y N 461 TYR CD1 CE1 sing Y N 462 TYR CD1 HD1 sing N N 463 TYR CD2 CE2 doub Y N 464 TYR CD2 HD2 sing N N 465 TYR CE1 CZ doub Y N 466 TYR CE1 HE1 sing N N 467 TYR CE2 CZ sing Y N 468 TYR CE2 HE2 sing N N 469 TYR CZ OH sing N N 470 TYR OH HH sing N N 471 TYR OXT HXT sing N N 472 U OP3 P sing N N 473 U OP3 HOP3 sing N N 474 U P OP1 doub N N 475 U P OP2 sing N N 476 U P "O5'" sing N N 477 U OP2 HOP2 sing N N 478 U "O5'" "C5'" sing N N 479 U "C5'" "C4'" sing N N 480 U "C5'" "H5'" sing N N 481 U "C5'" "H5''" sing N N 482 U "C4'" "O4'" sing N N 483 U "C4'" "C3'" sing N N 484 U "C4'" "H4'" sing N N 485 U "O4'" "C1'" sing N N 486 U "C3'" "O3'" sing N N 487 U "C3'" "C2'" sing N N 488 U "C3'" "H3'" sing N N 489 U "O3'" "HO3'" sing N N 490 U "C2'" "O2'" sing N N 491 U "C2'" "C1'" sing N N 492 U "C2'" "H2'" sing N N 493 U "O2'" "HO2'" sing N N 494 U "C1'" N1 sing N N 495 U "C1'" "H1'" sing N N 496 U N1 C2 sing N N 497 U N1 C6 sing N N 498 U C2 O2 doub N N 499 U C2 N3 sing N N 500 U N3 C4 sing N N 501 U N3 H3 sing N N 502 U C4 O4 doub N N 503 U C4 C5 sing N N 504 U C5 C6 doub N N 505 U C5 H5 sing N N 506 U C6 H6 sing N N 507 VAL N CA sing N N 508 VAL N H sing N N 509 VAL N H2 sing N N 510 VAL CA C sing N N 511 VAL CA CB sing N N 512 VAL CA HA sing N N 513 VAL C O doub N N 514 VAL C OXT sing N N 515 VAL CB CG1 sing N N 516 VAL CB CG2 sing N N 517 VAL CB HB sing N N 518 VAL CG1 HG11 sing N N 519 VAL CG1 HG12 sing N N 520 VAL CG1 HG13 sing N N 521 VAL CG2 HG21 sing N N 522 VAL CG2 HG22 sing N N 523 VAL CG2 HG23 sing N N 524 VAL OXT HXT sing N N 525 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4OOG 'double helix' 4OOG 'a-form double helix' 4OOG 'hairpin loop' 4OOG 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 D C 1 1_555 D G 32 1_555 -0.140 -0.101 0.074 -0.180 -8.612 3.932 1 D_C1:G32_D D 1 ? D 32 ? 19 1 1 D A 2 1_555 D U 31 1_555 0.257 -0.004 0.136 6.960 -10.732 -2.846 2 D_A2:U31_D D 2 ? D 31 ? 20 1 1 D U 3 1_555 D A 30 1_555 -0.363 -0.125 0.127 3.391 -15.965 3.994 3 D_U3:A30_D D 3 ? D 30 ? 20 1 1 D G 4 1_555 D C 29 1_555 -0.112 -0.207 -0.025 -12.776 -17.529 -0.322 4 D_G4:C29_D D 4 ? D 29 ? 19 1 1 D U 5 1_555 D G 28 1_555 2.507 -0.586 0.226 -1.355 -13.575 -4.774 5 D_U5:G28_D D 5 ? D 28 ? 28 1 1 D C 6 1_555 D G 27 1_555 0.029 -0.002 -0.058 6.326 -15.469 0.253 6 D_C6:G27_D D 6 ? D 27 ? 19 1 1 D A 7 1_555 D U 26 1_555 0.035 -0.029 0.235 2.173 -16.590 3.241 7 D_A7:U26_D D 7 ? D 26 ? 20 1 1 D U 8 1_555 D A 25 1_555 0.331 -0.221 0.059 2.946 -19.312 0.365 8 D_U8:A25_D D 8 ? D 25 ? 20 1 1 D G 9 1_555 D C 24 1_555 0.301 -0.272 0.327 -8.543 -18.093 -0.185 9 D_G9:C24_D D 9 ? D 24 ? 19 1 1 D U 10 1_555 D G 23 1_555 1.933 -0.317 0.371 -0.530 -12.042 4.616 10 D_U10:G23_D D 10 ? D 23 ? 28 1 1 D C 11 1_555 D G 22 1_555 0.461 -0.058 0.136 4.837 -12.986 -2.770 11 D_C11:G22_D D 11 ? D 22 ? 19 1 1 D A 12 1_555 D U 21 1_555 -0.201 -0.027 0.158 1.552 -8.163 -3.750 12 D_A12:U21_D D 12 ? D 21 ? 20 1 1 D U 13 1_555 D A 20 1_555 -0.107 -0.218 0.179 -3.294 -19.914 5.303 13 D_U13:A20_D D 13 ? D 20 ? 20 1 1 D G 14 1_555 D C 19 1_555 0.202 -0.108 -0.052 3.056 -4.204 1.513 14 D_G14:C19_D D 14 ? D 19 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 D C 1 1_555 D G 32 1_555 D A 2 1_555 D U 31 1_555 0.190 -1.647 3.026 2.237 11.056 25.676 -5.568 0.046 2.154 23.488 -4.752 28.007 1 DD_C1A2:U31G32_DD D 1 ? D 32 ? D 2 ? D 31 ? 1 D A 2 1_555 D U 31 1_555 D U 3 1_555 D A 30 1_555 0.375 -2.224 3.367 0.022 -1.741 29.914 -3.926 -0.721 3.488 -3.370 -0.043 29.963 2 DD_A2U3:A30U31_DD D 2 ? D 31 ? D 3 ? D 30 ? 1 D U 3 1_555 D A 30 1_555 D G 4 1_555 D C 29 1_555 -0.440 -1.821 3.553 -0.224 9.168 31.379 -4.845 0.743 2.922 16.514 0.403 32.660 3 DD_U3G4:C29A30_DD D 3 ? D 30 ? D 4 ? D 29 ? 1 D G 4 1_555 D C 29 1_555 D U 5 1_555 D G 28 1_555 -0.293 -1.190 2.917 -0.686 3.152 44.239 -1.834 0.333 2.834 4.179 0.910 44.351 4 DD_G4U5:G28C29_DD D 4 ? D 29 ? D 5 ? D 28 ? 1 D U 5 1_555 D G 28 1_555 D C 6 1_555 D G 27 1_555 0.255 -2.433 2.817 5.971 6.328 15.609 -10.566 1.754 1.692 21.281 -20.080 17.857 5 DD_U5C6:G27G28_DD D 5 ? D 28 ? D 6 ? D 27 ? 1 D C 6 1_555 D G 27 1_555 D A 7 1_555 D U 26 1_555 -0.347 -1.450 3.225 -2.222 13.297 34.463 -3.928 0.275 2.530 21.453 3.585 36.931 6 DD_C6A7:U26G27_DD D 6 ? D 27 ? D 7 ? D 26 ? 1 D A 7 1_555 D U 26 1_555 D U 8 1_555 D A 25 1_555 -0.051 -1.094 3.307 1.777 6.052 33.110 -2.855 0.372 3.058 10.501 -3.084 33.689 7 DD_A7U8:A25U26_DD D 7 ? D 26 ? D 8 ? D 25 ? 1 D U 8 1_555 D A 25 1_555 D G 9 1_555 D C 24 1_555 0.154 -1.230 3.347 -0.319 11.256 33.512 -3.638 -0.299 2.800 18.872 0.535 35.302 8 DD_U8G9:C24A25_DD D 8 ? D 25 ? D 9 ? D 24 ? 1 D G 9 1_555 D C 24 1_555 D U 10 1_555 D G 23 1_555 0.116 -1.191 3.068 -0.044 1.769 37.687 -2.054 -0.184 3.011 2.736 0.069 37.727 9 DD_G9U10:G23C24_DD D 9 ? D 24 ? D 10 ? D 23 ? 1 D U 10 1_555 D G 23 1_555 D C 11 1_555 D G 22 1_555 0.086 -1.659 2.982 4.240 0.276 31.861 -3.041 0.537 2.955 0.500 -7.682 32.136 10 DD_U10C11:G22G23_DD D 10 ? D 23 ? D 11 ? D 22 ? 1 D C 11 1_555 D G 22 1_555 D A 12 1_555 D U 21 1_555 0.101 -2.429 3.332 -1.707 2.144 20.893 -7.525 -0.978 3.052 5.879 4.680 21.070 11 DD_C11A12:U21G22_DD D 11 ? D 22 ? D 12 ? D 21 ? 1 D A 12 1_555 D U 21 1_555 D U 13 1_555 D A 20 1_555 0.220 -2.187 3.519 0.244 -3.870 33.325 -3.082 -0.337 3.744 -6.721 -0.424 33.544 12 DD_A12U13:A20U21_DD D 12 ? D 21 ? D 13 ? D 20 ? 1 D U 13 1_555 D A 20 1_555 D G 14 1_555 D C 19 1_555 -0.348 -1.729 3.058 2.483 9.936 29.197 -4.876 1.061 2.321 18.989 -4.746 30.905 13 DD_U13G14:C19A20_DD D 13 ? D 20 ? D 14 ? D 19 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'MAGNESIUM ION' MG 5 water HOH # loop_ _pdbx_initial_refinement_model.id _pdbx_initial_refinement_model.entity_id_list _pdbx_initial_refinement_model.type _pdbx_initial_refinement_model.source_name _pdbx_initial_refinement_model.accession_code _pdbx_initial_refinement_model.details 1 ? 'experimental model' PDB 3RV0 'PDB ENTRIES 3RV0, 3RV1, 1YYW, 2NUG, 1O0W, 3N3W, 3O2R, 3C4T, AND 1T4O' 2 ? 'experimental model' PDB 3RV1 'PDB ENTRIES 3RV0, 3RV1, 1YYW, 2NUG, 1O0W, 3N3W, 3O2R, 3C4T, AND 1T4O' 3 ? 'experimental model' PDB 1YYW 'PDB ENTRIES 3RV0, 3RV1, 1YYW, 2NUG, 1O0W, 3N3W, 3O2R, 3C4T, AND 1T4O' 4 ? 'experimental model' PDB 2NUG 'PDB ENTRIES 3RV0, 3RV1, 1YYW, 2NUG, 1O0W, 3N3W, 3O2R, 3C4T, AND 1T4O' 5 ? 'experimental model' PDB 1O0W 'PDB ENTRIES 3RV0, 3RV1, 1YYW, 2NUG, 1O0W, 3N3W, 3O2R, 3C4T, AND 1T4O' 6 ? 'experimental model' PDB 3N3W 'PDB ENTRIES 3RV0, 3RV1, 1YYW, 2NUG, 1O0W, 3N3W, 3O2R, 3C4T, AND 1T4O' 7 ? 'experimental model' PDB 3O2R 'PDB ENTRIES 3RV0, 3RV1, 1YYW, 2NUG, 1O0W, 3N3W, 3O2R, 3C4T, AND 1T4O' 8 ? 'experimental model' PDB 3C4T 'PDB ENTRIES 3RV0, 3RV1, 1YYW, 2NUG, 1O0W, 3N3W, 3O2R, 3C4T, AND 1T4O' 9 ? 'experimental model' PDB 1T4O 'PDB ENTRIES 3RV0, 3RV1, 1YYW, 2NUG, 1O0W, 3N3W, 3O2R, 3C4T, AND 1T4O' #