data_4PLM # _entry.id 4PLM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4PLM pdb_00004plm 10.2210/pdb4plm/pdb WWPDB D_1000201633 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-06-18 2 'Structure model' 1 1 2014-06-25 3 'Structure model' 1 2 2015-02-25 4 'Structure model' 1 3 2017-09-27 5 'Structure model' 1 4 2019-12-04 6 'Structure model' 1 5 2020-07-29 7 'Structure model' 1 6 2023-12-27 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 6 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Derived calculations' 3 4 'Structure model' 'Author supporting evidence' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' Other 7 4 'Structure model' 'Refinement description' 8 4 'Structure model' 'Source and taxonomy' 9 4 'Structure model' 'Structure summary' 10 5 'Structure model' 'Author supporting evidence' 11 6 'Structure model' 'Data collection' 12 6 'Structure model' 'Derived calculations' 13 6 'Structure model' 'Refinement description' 14 6 'Structure model' 'Structure summary' 15 7 'Structure model' 'Data collection' 16 7 'Structure model' 'Database references' 17 7 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' citation 2 4 'Structure model' entity 3 4 'Structure model' entity_src_gen 4 4 'Structure model' pdbx_audit_support 5 4 'Structure model' pdbx_database_status 6 4 'Structure model' pdbx_struct_oper_list 7 4 'Structure model' software 8 5 'Structure model' pdbx_audit_support 9 6 'Structure model' chem_comp 10 6 'Structure model' entity 11 6 'Structure model' pdbx_chem_comp_identifier 12 6 'Structure model' pdbx_entity_nonpoly 13 6 'Structure model' refine_hist 14 6 'Structure model' struct_conn 15 6 'Structure model' struct_site 16 6 'Structure model' struct_site_gen 17 7 'Structure model' chem_comp 18 7 'Structure model' chem_comp_atom 19 7 'Structure model' chem_comp_bond 20 7 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_citation.journal_id_CSD' 2 4 'Structure model' '_entity.pdbx_description' 3 4 'Structure model' '_entity_src_gen.pdbx_alt_source_flag' 4 4 'Structure model' '_pdbx_audit_support.funding_organization' 5 4 'Structure model' '_pdbx_database_status.pdb_format_compatible' 6 4 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 7 5 'Structure model' '_pdbx_audit_support.funding_organization' 8 6 'Structure model' '_chem_comp.name' 9 6 'Structure model' '_chem_comp.type' 10 6 'Structure model' '_entity.pdbx_description' 11 6 'Structure model' '_pdbx_entity_nonpoly.name' 12 6 'Structure model' '_refine_hist.pdbx_number_atoms_nucleic_acid' 13 6 'Structure model' '_refine_hist.pdbx_number_atoms_protein' 14 6 'Structure model' '_struct_conn.conn_type_id' 15 6 'Structure model' '_struct_conn.id' 16 6 'Structure model' '_struct_conn.pdbx_dist_value' 17 6 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 18 6 'Structure model' '_struct_conn.pdbx_role' 19 6 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 20 6 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 21 6 'Structure model' '_struct_conn.ptnr1_label_atom_id' 22 6 'Structure model' '_struct_conn.ptnr1_label_comp_id' 23 6 'Structure model' '_struct_conn.ptnr1_label_seq_id' 24 6 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 25 6 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 26 6 'Structure model' '_struct_conn.ptnr2_label_asym_id' 27 6 'Structure model' '_struct_conn.ptnr2_label_atom_id' 28 6 'Structure model' '_struct_conn.ptnr2_label_comp_id' 29 7 'Structure model' '_chem_comp.pdbx_synonyms' 30 7 'Structure model' '_database_2.pdbx_DOI' 31 7 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 4PLM _pdbx_database_status.recvd_initial_deposition_date 2014-05-18 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.content_type _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.details unspecified 4PLN PDB . unspecified 4PLO PDB . # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Xu, K.' 1 'Nikolov, D.B.' 2 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Science _citation.journal_id_ASTM SCIEAS _citation.journal_id_CSD 0038 _citation.journal_id_ISSN 1095-9203 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 344 _citation.language ? _citation.page_first 1275 _citation.page_last 1279 _citation.title 'Neural migration. Structures of netrin-1 bound to two receptors provide insight into its axon guidance mechanism.' _citation.year 2014 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1126/science.1255149 _citation.pdbx_database_id_PubMed 24876346 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Xu, K.' 1 ? primary 'Wu, Z.' 2 ? primary 'Renier, N.' 3 ? primary 'Antipenko, A.' 4 ? primary 'Tzvetkova-Robev, D.' 5 ? primary 'Xu, Y.' 6 ? primary 'Minchenko, M.' 7 ? primary 'Nardi-Dei, V.' 8 ? primary 'Rajashankar, K.R.' 9 ? primary 'Himanen, J.' 10 ? primary 'Tessier-Lavigne, M.' 11 ? primary 'Nikolov, D.B.' 12 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Netrin-1 48545.699 1 ? ? 'LN-LE3 (UNP residues 26-457)' ? 2 non-polymer syn 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 3 ? ? ? ? 3 non-polymer syn 'CALCIUM ION' 40.078 1 ? ? ? ? 4 non-polymer syn 'CHLORIDE ION' 35.453 2 ? ? ? ? 5 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 6 water nat water 18.015 82 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GYPGLNMFAVQTAQPDPCYDEHGLPRRCIPDFVNSAFGKEVKVSSTCGKPPSRYCVVTEKGEEQVRSCHLCNASDPKRAH PPSFLTDLNNPHNLTCWQSDSYVQYPHNVTLTLSLGKKFEVTYVSLQFCSPRPESMAIYKSMDYGKTWVPFQFYSTQCRK MYNKPSRAAITKQNEQEAICTDSHTDVRPLSGGLIAFSTLDGRPTAHDFDNSPVLQDWVTATDIKVTFSRLHTFGDENED DSELARDSYFYAVSDLQVGGRCKCNGHASRCVRDRDDNLVCDCKHNTAGPECDRCKPFHYDRPWQRATAREANECVACNC NLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDLSKPISHRKACKECDCHPVGAAGQTCNQTTGQC PCKDGVTGITCNRCAKGYQQSRSPIAPCIKIP ; _entity_poly.pdbx_seq_one_letter_code_can ;GYPGLNMFAVQTAQPDPCYDEHGLPRRCIPDFVNSAFGKEVKVSSTCGKPPSRYCVVTEKGEEQVRSCHLCNASDPKRAH PPSFLTDLNNPHNLTCWQSDSYVQYPHNVTLTLSLGKKFEVTYVSLQFCSPRPESMAIYKSMDYGKTWVPFQFYSTQCRK MYNKPSRAAITKQNEQEAICTDSHTDVRPLSGGLIAFSTLDGRPTAHDFDNSPVLQDWVTATDIKVTFSRLHTFGDENED DSELARDSYFYAVSDLQVGGRCKCNGHASRCVRDRDDNLVCDCKHNTAGPECDRCKPFHYDRPWQRATAREANECVACNC NLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDLSKPISHRKACKECDCHPVGAAGQTCNQTTGQC PCKDGVTGITCNRCAKGYQQSRSPIAPCIKIP ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 3 'CALCIUM ION' CA 4 'CHLORIDE ION' CL 5 'MAGNESIUM ION' MG 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 TYR n 1 3 PRO n 1 4 GLY n 1 5 LEU n 1 6 ASN n 1 7 MET n 1 8 PHE n 1 9 ALA n 1 10 VAL n 1 11 GLN n 1 12 THR n 1 13 ALA n 1 14 GLN n 1 15 PRO n 1 16 ASP n 1 17 PRO n 1 18 CYS n 1 19 TYR n 1 20 ASP n 1 21 GLU n 1 22 HIS n 1 23 GLY n 1 24 LEU n 1 25 PRO n 1 26 ARG n 1 27 ARG n 1 28 CYS n 1 29 ILE n 1 30 PRO n 1 31 ASP n 1 32 PHE n 1 33 VAL n 1 34 ASN n 1 35 SER n 1 36 ALA n 1 37 PHE n 1 38 GLY n 1 39 LYS n 1 40 GLU n 1 41 VAL n 1 42 LYS n 1 43 VAL n 1 44 SER n 1 45 SER n 1 46 THR n 1 47 CYS n 1 48 GLY n 1 49 LYS n 1 50 PRO n 1 51 PRO n 1 52 SER n 1 53 ARG n 1 54 TYR n 1 55 CYS n 1 56 VAL n 1 57 VAL n 1 58 THR n 1 59 GLU n 1 60 LYS n 1 61 GLY n 1 62 GLU n 1 63 GLU n 1 64 GLN n 1 65 VAL n 1 66 ARG n 1 67 SER n 1 68 CYS n 1 69 HIS n 1 70 LEU n 1 71 CYS n 1 72 ASN n 1 73 ALA n 1 74 SER n 1 75 ASP n 1 76 PRO n 1 77 LYS n 1 78 ARG n 1 79 ALA n 1 80 HIS n 1 81 PRO n 1 82 PRO n 1 83 SER n 1 84 PHE n 1 85 LEU n 1 86 THR n 1 87 ASP n 1 88 LEU n 1 89 ASN n 1 90 ASN n 1 91 PRO n 1 92 HIS n 1 93 ASN n 1 94 LEU n 1 95 THR n 1 96 CYS n 1 97 TRP n 1 98 GLN n 1 99 SER n 1 100 ASP n 1 101 SER n 1 102 TYR n 1 103 VAL n 1 104 GLN n 1 105 TYR n 1 106 PRO n 1 107 HIS n 1 108 ASN n 1 109 VAL n 1 110 THR n 1 111 LEU n 1 112 THR n 1 113 LEU n 1 114 SER n 1 115 LEU n 1 116 GLY n 1 117 LYS n 1 118 LYS n 1 119 PHE n 1 120 GLU n 1 121 VAL n 1 122 THR n 1 123 TYR n 1 124 VAL n 1 125 SER n 1 126 LEU n 1 127 GLN n 1 128 PHE n 1 129 CYS n 1 130 SER n 1 131 PRO n 1 132 ARG n 1 133 PRO n 1 134 GLU n 1 135 SER n 1 136 MET n 1 137 ALA n 1 138 ILE n 1 139 TYR n 1 140 LYS n 1 141 SER n 1 142 MET n 1 143 ASP n 1 144 TYR n 1 145 GLY n 1 146 LYS n 1 147 THR n 1 148 TRP n 1 149 VAL n 1 150 PRO n 1 151 PHE n 1 152 GLN n 1 153 PHE n 1 154 TYR n 1 155 SER n 1 156 THR n 1 157 GLN n 1 158 CYS n 1 159 ARG n 1 160 LYS n 1 161 MET n 1 162 TYR n 1 163 ASN n 1 164 LYS n 1 165 PRO n 1 166 SER n 1 167 ARG n 1 168 ALA n 1 169 ALA n 1 170 ILE n 1 171 THR n 1 172 LYS n 1 173 GLN n 1 174 ASN n 1 175 GLU n 1 176 GLN n 1 177 GLU n 1 178 ALA n 1 179 ILE n 1 180 CYS n 1 181 THR n 1 182 ASP n 1 183 SER n 1 184 HIS n 1 185 THR n 1 186 ASP n 1 187 VAL n 1 188 ARG n 1 189 PRO n 1 190 LEU n 1 191 SER n 1 192 GLY n 1 193 GLY n 1 194 LEU n 1 195 ILE n 1 196 ALA n 1 197 PHE n 1 198 SER n 1 199 THR n 1 200 LEU n 1 201 ASP n 1 202 GLY n 1 203 ARG n 1 204 PRO n 1 205 THR n 1 206 ALA n 1 207 HIS n 1 208 ASP n 1 209 PHE n 1 210 ASP n 1 211 ASN n 1 212 SER n 1 213 PRO n 1 214 VAL n 1 215 LEU n 1 216 GLN n 1 217 ASP n 1 218 TRP n 1 219 VAL n 1 220 THR n 1 221 ALA n 1 222 THR n 1 223 ASP n 1 224 ILE n 1 225 LYS n 1 226 VAL n 1 227 THR n 1 228 PHE n 1 229 SER n 1 230 ARG n 1 231 LEU n 1 232 HIS n 1 233 THR n 1 234 PHE n 1 235 GLY n 1 236 ASP n 1 237 GLU n 1 238 ASN n 1 239 GLU n 1 240 ASP n 1 241 ASP n 1 242 SER n 1 243 GLU n 1 244 LEU n 1 245 ALA n 1 246 ARG n 1 247 ASP n 1 248 SER n 1 249 TYR n 1 250 PHE n 1 251 TYR n 1 252 ALA n 1 253 VAL n 1 254 SER n 1 255 ASP n 1 256 LEU n 1 257 GLN n 1 258 VAL n 1 259 GLY n 1 260 GLY n 1 261 ARG n 1 262 CYS n 1 263 LYS n 1 264 CYS n 1 265 ASN n 1 266 GLY n 1 267 HIS n 1 268 ALA n 1 269 SER n 1 270 ARG n 1 271 CYS n 1 272 VAL n 1 273 ARG n 1 274 ASP n 1 275 ARG n 1 276 ASP n 1 277 ASP n 1 278 ASN n 1 279 LEU n 1 280 VAL n 1 281 CYS n 1 282 ASP n 1 283 CYS n 1 284 LYS n 1 285 HIS n 1 286 ASN n 1 287 THR n 1 288 ALA n 1 289 GLY n 1 290 PRO n 1 291 GLU n 1 292 CYS n 1 293 ASP n 1 294 ARG n 1 295 CYS n 1 296 LYS n 1 297 PRO n 1 298 PHE n 1 299 HIS n 1 300 TYR n 1 301 ASP n 1 302 ARG n 1 303 PRO n 1 304 TRP n 1 305 GLN n 1 306 ARG n 1 307 ALA n 1 308 THR n 1 309 ALA n 1 310 ARG n 1 311 GLU n 1 312 ALA n 1 313 ASN n 1 314 GLU n 1 315 CYS n 1 316 VAL n 1 317 ALA n 1 318 CYS n 1 319 ASN n 1 320 CYS n 1 321 ASN n 1 322 LEU n 1 323 HIS n 1 324 ALA n 1 325 ARG n 1 326 ARG n 1 327 CYS n 1 328 ARG n 1 329 PHE n 1 330 ASN n 1 331 MET n 1 332 GLU n 1 333 LEU n 1 334 TYR n 1 335 LYS n 1 336 LEU n 1 337 SER n 1 338 GLY n 1 339 ARG n 1 340 LYS n 1 341 SER n 1 342 GLY n 1 343 GLY n 1 344 VAL n 1 345 CYS n 1 346 LEU n 1 347 ASN n 1 348 CYS n 1 349 ARG n 1 350 HIS n 1 351 ASN n 1 352 THR n 1 353 ALA n 1 354 GLY n 1 355 ARG n 1 356 HIS n 1 357 CYS n 1 358 HIS n 1 359 TYR n 1 360 CYS n 1 361 LYS n 1 362 GLU n 1 363 GLY n 1 364 PHE n 1 365 TYR n 1 366 ARG n 1 367 ASP n 1 368 LEU n 1 369 SER n 1 370 LYS n 1 371 PRO n 1 372 ILE n 1 373 SER n 1 374 HIS n 1 375 ARG n 1 376 LYS n 1 377 ALA n 1 378 CYS n 1 379 LYS n 1 380 GLU n 1 381 CYS n 1 382 ASP n 1 383 CYS n 1 384 HIS n 1 385 PRO n 1 386 VAL n 1 387 GLY n 1 388 ALA n 1 389 ALA n 1 390 GLY n 1 391 GLN n 1 392 THR n 1 393 CYS n 1 394 ASN n 1 395 GLN n 1 396 THR n 1 397 THR n 1 398 GLY n 1 399 GLN n 1 400 CYS n 1 401 PRO n 1 402 CYS n 1 403 LYS n 1 404 ASP n 1 405 GLY n 1 406 VAL n 1 407 THR n 1 408 GLY n 1 409 ILE n 1 410 THR n 1 411 CYS n 1 412 ASN n 1 413 ARG n 1 414 CYS n 1 415 ALA n 1 416 LYS n 1 417 GLY n 1 418 TYR n 1 419 GLN n 1 420 GLN n 1 421 SER n 1 422 ARG n 1 423 SER n 1 424 PRO n 1 425 ILE n 1 426 ALA n 1 427 PRO n 1 428 CYS n 1 429 ILE n 1 430 LYS n 1 431 ILE n 1 432 PRO n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 432 _entity_src_gen.gene_src_common_name Chicken _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene NTN1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Gallus gallus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9031 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name Baculoviridae _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 10442 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 26 ? ? ? A . n A 1 2 TYR 2 27 ? ? ? A . n A 1 3 PRO 3 28 ? ? ? A . n A 1 4 GLY 4 29 ? ? ? A . n A 1 5 LEU 5 30 ? ? ? A . n A 1 6 ASN 6 31 ? ? ? A . n A 1 7 MET 7 32 ? ? ? A . n A 1 8 PHE 8 33 ? ? ? A . n A 1 9 ALA 9 34 ? ? ? A . n A 1 10 VAL 10 35 ? ? ? A . n A 1 11 GLN 11 36 ? ? ? A . n A 1 12 THR 12 37 ? ? ? A . n A 1 13 ALA 13 38 ? ? ? A . n A 1 14 GLN 14 39 ? ? ? A . n A 1 15 PRO 15 40 40 PRO PRO A . n A 1 16 ASP 16 41 41 ASP ASP A . n A 1 17 PRO 17 42 42 PRO PRO A . n A 1 18 CYS 18 43 43 CYS CYS A . n A 1 19 TYR 19 44 44 TYR TYR A . n A 1 20 ASP 20 45 45 ASP ASP A . n A 1 21 GLU 21 46 46 GLU GLU A . n A 1 22 HIS 22 47 47 HIS HIS A . n A 1 23 GLY 23 48 48 GLY GLY A . n A 1 24 LEU 24 49 49 LEU LEU A . n A 1 25 PRO 25 50 50 PRO PRO A . n A 1 26 ARG 26 51 51 ARG ARG A . n A 1 27 ARG 27 52 52 ARG ARG A . n A 1 28 CYS 28 53 53 CYS CYS A . n A 1 29 ILE 29 54 54 ILE ILE A . n A 1 30 PRO 30 55 55 PRO PRO A . n A 1 31 ASP 31 56 56 ASP ASP A . n A 1 32 PHE 32 57 57 PHE PHE A . n A 1 33 VAL 33 58 58 VAL VAL A . n A 1 34 ASN 34 59 59 ASN ASN A . n A 1 35 SER 35 60 60 SER SER A . n A 1 36 ALA 36 61 61 ALA ALA A . n A 1 37 PHE 37 62 62 PHE PHE A . n A 1 38 GLY 38 63 63 GLY GLY A . n A 1 39 LYS 39 64 64 LYS LYS A . n A 1 40 GLU 40 65 65 GLU GLU A . n A 1 41 VAL 41 66 66 VAL VAL A . n A 1 42 LYS 42 67 67 LYS LYS A . n A 1 43 VAL 43 68 68 VAL VAL A . n A 1 44 SER 44 69 69 SER SER A . n A 1 45 SER 45 70 70 SER SER A . n A 1 46 THR 46 71 71 THR THR A . n A 1 47 CYS 47 72 72 CYS CYS A . n A 1 48 GLY 48 73 73 GLY GLY A . n A 1 49 LYS 49 74 74 LYS LYS A . n A 1 50 PRO 50 75 75 PRO PRO A . n A 1 51 PRO 51 76 76 PRO PRO A . n A 1 52 SER 52 77 77 SER SER A . n A 1 53 ARG 53 78 78 ARG ARG A . n A 1 54 TYR 54 79 79 TYR TYR A . n A 1 55 CYS 55 80 80 CYS CYS A . n A 1 56 VAL 56 81 81 VAL VAL A . n A 1 57 VAL 57 82 82 VAL VAL A . n A 1 58 THR 58 83 83 THR THR A . n A 1 59 GLU 59 84 84 GLU GLU A . n A 1 60 LYS 60 85 85 LYS LYS A . n A 1 61 GLY 61 86 86 GLY GLY A . n A 1 62 GLU 62 87 87 GLU GLU A . n A 1 63 GLU 63 88 88 GLU GLU A . n A 1 64 GLN 64 89 89 GLN GLN A . n A 1 65 VAL 65 90 90 VAL VAL A . n A 1 66 ARG 66 91 91 ARG ARG A . n A 1 67 SER 67 92 92 SER SER A . n A 1 68 CYS 68 93 93 CYS CYS A . n A 1 69 HIS 69 94 94 HIS HIS A . n A 1 70 LEU 70 95 95 LEU LEU A . n A 1 71 CYS 71 96 96 CYS CYS A . n A 1 72 ASN 72 97 97 ASN ASN A . n A 1 73 ALA 73 98 98 ALA ALA A . n A 1 74 SER 74 99 99 SER SER A . n A 1 75 ASP 75 100 100 ASP ASP A . n A 1 76 PRO 76 101 101 PRO PRO A . n A 1 77 LYS 77 102 102 LYS LYS A . n A 1 78 ARG 78 103 103 ARG ARG A . n A 1 79 ALA 79 104 104 ALA ALA A . n A 1 80 HIS 80 105 105 HIS HIS A . n A 1 81 PRO 81 106 106 PRO PRO A . n A 1 82 PRO 82 107 107 PRO PRO A . n A 1 83 SER 83 108 108 SER SER A . n A 1 84 PHE 84 109 109 PHE PHE A . n A 1 85 LEU 85 110 110 LEU LEU A . n A 1 86 THR 86 111 111 THR THR A . n A 1 87 ASP 87 112 112 ASP ASP A . n A 1 88 LEU 88 113 113 LEU LEU A . n A 1 89 ASN 89 114 114 ASN ASN A . n A 1 90 ASN 90 115 115 ASN ASN A . n A 1 91 PRO 91 116 116 PRO PRO A . n A 1 92 HIS 92 117 117 HIS HIS A . n A 1 93 ASN 93 118 118 ASN ASN A . n A 1 94 LEU 94 119 119 LEU LEU A . n A 1 95 THR 95 120 120 THR THR A . n A 1 96 CYS 96 121 121 CYS CYS A . n A 1 97 TRP 97 122 122 TRP TRP A . n A 1 98 GLN 98 123 123 GLN GLN A . n A 1 99 SER 99 124 124 SER SER A . n A 1 100 ASP 100 125 125 ASP ASP A . n A 1 101 SER 101 126 126 SER SER A . n A 1 102 TYR 102 127 127 TYR TYR A . n A 1 103 VAL 103 128 128 VAL VAL A . n A 1 104 GLN 104 129 129 GLN GLN A . n A 1 105 TYR 105 130 130 TYR TYR A . n A 1 106 PRO 106 131 131 PRO PRO A . n A 1 107 HIS 107 132 132 HIS HIS A . n A 1 108 ASN 108 133 133 ASN ASN A . n A 1 109 VAL 109 134 134 VAL VAL A . n A 1 110 THR 110 135 135 THR THR A . n A 1 111 LEU 111 136 136 LEU LEU A . n A 1 112 THR 112 137 137 THR THR A . n A 1 113 LEU 113 138 138 LEU LEU A . n A 1 114 SER 114 139 139 SER SER A . n A 1 115 LEU 115 140 140 LEU LEU A . n A 1 116 GLY 116 141 141 GLY GLY A . n A 1 117 LYS 117 142 142 LYS LYS A . n A 1 118 LYS 118 143 143 LYS LYS A . n A 1 119 PHE 119 144 144 PHE PHE A . n A 1 120 GLU 120 145 145 GLU GLU A . n A 1 121 VAL 121 146 146 VAL VAL A . n A 1 122 THR 122 147 147 THR THR A . n A 1 123 TYR 123 148 148 TYR TYR A . n A 1 124 VAL 124 149 149 VAL VAL A . n A 1 125 SER 125 150 150 SER SER A . n A 1 126 LEU 126 151 151 LEU LEU A . n A 1 127 GLN 127 152 152 GLN GLN A . n A 1 128 PHE 128 153 153 PHE PHE A . n A 1 129 CYS 129 154 154 CYS CYS A . n A 1 130 SER 130 155 155 SER SER A . n A 1 131 PRO 131 156 156 PRO PRO A . n A 1 132 ARG 132 157 157 ARG ARG A . n A 1 133 PRO 133 158 158 PRO PRO A . n A 1 134 GLU 134 159 159 GLU GLU A . n A 1 135 SER 135 160 160 SER SER A . n A 1 136 MET 136 161 161 MET MET A . n A 1 137 ALA 137 162 162 ALA ALA A . n A 1 138 ILE 138 163 163 ILE ILE A . n A 1 139 TYR 139 164 164 TYR TYR A . n A 1 140 LYS 140 165 165 LYS LYS A . n A 1 141 SER 141 166 166 SER SER A . n A 1 142 MET 142 167 167 MET MET A . n A 1 143 ASP 143 168 168 ASP ASP A . n A 1 144 TYR 144 169 169 TYR TYR A . n A 1 145 GLY 145 170 170 GLY GLY A . n A 1 146 LYS 146 171 171 LYS LYS A . n A 1 147 THR 147 172 172 THR THR A . n A 1 148 TRP 148 173 173 TRP TRP A . n A 1 149 VAL 149 174 174 VAL VAL A . n A 1 150 PRO 150 175 175 PRO PRO A . n A 1 151 PHE 151 176 176 PHE PHE A . n A 1 152 GLN 152 177 177 GLN GLN A . n A 1 153 PHE 153 178 178 PHE PHE A . n A 1 154 TYR 154 179 179 TYR TYR A . n A 1 155 SER 155 180 180 SER SER A . n A 1 156 THR 156 181 181 THR THR A . n A 1 157 GLN 157 182 182 GLN GLN A . n A 1 158 CYS 158 183 183 CYS CYS A . n A 1 159 ARG 159 184 184 ARG ARG A . n A 1 160 LYS 160 185 185 LYS LYS A . n A 1 161 MET 161 186 186 MET MET A . n A 1 162 TYR 162 187 187 TYR TYR A . n A 1 163 ASN 163 188 188 ASN ASN A . n A 1 164 LYS 164 189 189 LYS LYS A . n A 1 165 PRO 165 190 190 PRO PRO A . n A 1 166 SER 166 191 191 SER SER A . n A 1 167 ARG 167 192 192 ARG ARG A . n A 1 168 ALA 168 193 193 ALA ALA A . n A 1 169 ALA 169 194 194 ALA ALA A . n A 1 170 ILE 170 195 195 ILE ILE A . n A 1 171 THR 171 196 196 THR THR A . n A 1 172 LYS 172 197 197 LYS LYS A . n A 1 173 GLN 173 198 198 GLN GLN A . n A 1 174 ASN 174 199 199 ASN ASN A . n A 1 175 GLU 175 200 200 GLU GLU A . n A 1 176 GLN 176 201 201 GLN GLN A . n A 1 177 GLU 177 202 202 GLU GLU A . n A 1 178 ALA 178 203 203 ALA ALA A . n A 1 179 ILE 179 204 204 ILE ILE A . n A 1 180 CYS 180 205 205 CYS CYS A . n A 1 181 THR 181 206 206 THR THR A . n A 1 182 ASP 182 207 207 ASP ASP A . n A 1 183 SER 183 208 208 SER SER A . n A 1 184 HIS 184 209 209 HIS HIS A . n A 1 185 THR 185 210 210 THR THR A . n A 1 186 ASP 186 211 211 ASP ASP A . n A 1 187 VAL 187 212 212 VAL VAL A . n A 1 188 ARG 188 213 213 ARG ARG A . n A 1 189 PRO 189 214 214 PRO PRO A . n A 1 190 LEU 190 215 215 LEU LEU A . n A 1 191 SER 191 216 216 SER SER A . n A 1 192 GLY 192 217 217 GLY GLY A . n A 1 193 GLY 193 218 218 GLY GLY A . n A 1 194 LEU 194 219 219 LEU LEU A . n A 1 195 ILE 195 220 220 ILE ILE A . n A 1 196 ALA 196 221 221 ALA ALA A . n A 1 197 PHE 197 222 222 PHE PHE A . n A 1 198 SER 198 223 223 SER SER A . n A 1 199 THR 199 224 224 THR THR A . n A 1 200 LEU 200 225 225 LEU LEU A . n A 1 201 ASP 201 226 226 ASP ASP A . n A 1 202 GLY 202 227 227 GLY GLY A . n A 1 203 ARG 203 228 228 ARG ARG A . n A 1 204 PRO 204 229 229 PRO PRO A . n A 1 205 THR 205 230 230 THR THR A . n A 1 206 ALA 206 231 231 ALA ALA A . n A 1 207 HIS 207 232 232 HIS HIS A . n A 1 208 ASP 208 233 233 ASP ASP A . n A 1 209 PHE 209 234 234 PHE PHE A . n A 1 210 ASP 210 235 235 ASP ASP A . n A 1 211 ASN 211 236 236 ASN ASN A . n A 1 212 SER 212 237 237 SER SER A . n A 1 213 PRO 213 238 238 PRO PRO A . n A 1 214 VAL 214 239 239 VAL VAL A . n A 1 215 LEU 215 240 240 LEU LEU A . n A 1 216 GLN 216 241 241 GLN GLN A . n A 1 217 ASP 217 242 242 ASP ASP A . n A 1 218 TRP 218 243 243 TRP TRP A . n A 1 219 VAL 219 244 244 VAL VAL A . n A 1 220 THR 220 245 245 THR THR A . n A 1 221 ALA 221 246 246 ALA ALA A . n A 1 222 THR 222 247 247 THR THR A . n A 1 223 ASP 223 248 248 ASP ASP A . n A 1 224 ILE 224 249 249 ILE ILE A . n A 1 225 LYS 225 250 250 LYS LYS A . n A 1 226 VAL 226 251 251 VAL VAL A . n A 1 227 THR 227 252 252 THR THR A . n A 1 228 PHE 228 253 253 PHE PHE A . n A 1 229 SER 229 254 254 SER SER A . n A 1 230 ARG 230 255 255 ARG ARG A . n A 1 231 LEU 231 256 256 LEU LEU A . n A 1 232 HIS 232 257 257 HIS HIS A . n A 1 233 THR 233 258 258 THR THR A . n A 1 234 PHE 234 259 259 PHE PHE A . n A 1 235 GLY 235 260 260 GLY GLY A . n A 1 236 ASP 236 261 261 ASP ASP A . n A 1 237 GLU 237 262 ? ? ? A . n A 1 238 ASN 238 263 ? ? ? A . n A 1 239 GLU 239 264 264 GLU ALA A . n A 1 240 ASP 240 265 265 ASP ALA A . n A 1 241 ASP 241 266 266 ASP ASP A . n A 1 242 SER 242 267 267 SER SER A . n A 1 243 GLU 243 268 268 GLU GLU A . n A 1 244 LEU 244 269 269 LEU LEU A . n A 1 245 ALA 245 270 270 ALA ALA A . n A 1 246 ARG 246 271 271 ARG ARG A . n A 1 247 ASP 247 272 272 ASP ASP A . n A 1 248 SER 248 273 273 SER SER A . n A 1 249 TYR 249 274 274 TYR TYR A . n A 1 250 PHE 250 275 275 PHE PHE A . n A 1 251 TYR 251 276 276 TYR TYR A . n A 1 252 ALA 252 277 277 ALA ALA A . n A 1 253 VAL 253 278 278 VAL VAL A . n A 1 254 SER 254 279 279 SER SER A . n A 1 255 ASP 255 280 280 ASP ASP A . n A 1 256 LEU 256 281 281 LEU LEU A . n A 1 257 GLN 257 282 282 GLN GLN A . n A 1 258 VAL 258 283 283 VAL VAL A . n A 1 259 GLY 259 284 284 GLY GLY A . n A 1 260 GLY 260 285 285 GLY GLY A . n A 1 261 ARG 261 286 286 ARG ARG A . n A 1 262 CYS 262 287 287 CYS CYS A . n A 1 263 LYS 263 288 288 LYS LYS A . n A 1 264 CYS 264 289 289 CYS CYS A . n A 1 265 ASN 265 290 290 ASN ASN A . n A 1 266 GLY 266 291 291 GLY GLY A . n A 1 267 HIS 267 292 292 HIS HIS A . n A 1 268 ALA 268 293 293 ALA ALA A . n A 1 269 SER 269 294 294 SER SER A . n A 1 270 ARG 270 295 295 ARG ARG A . n A 1 271 CYS 271 296 296 CYS CYS A . n A 1 272 VAL 272 297 297 VAL VAL A . n A 1 273 ARG 273 298 298 ARG ARG A . n A 1 274 ASP 274 299 299 ASP ASP A . n A 1 275 ARG 275 300 300 ARG ARG A . n A 1 276 ASP 276 301 301 ASP ASP A . n A 1 277 ASP 277 302 302 ASP ASP A . n A 1 278 ASN 278 303 303 ASN ASN A . n A 1 279 LEU 279 304 304 LEU LEU A . n A 1 280 VAL 280 305 305 VAL VAL A . n A 1 281 CYS 281 306 306 CYS CYS A . n A 1 282 ASP 282 307 307 ASP ASP A . n A 1 283 CYS 283 308 308 CYS CYS A . n A 1 284 LYS 284 309 309 LYS LYS A . n A 1 285 HIS 285 310 310 HIS HIS A . n A 1 286 ASN 286 311 311 ASN ASN A . n A 1 287 THR 287 312 312 THR THR A . n A 1 288 ALA 288 313 313 ALA ALA A . n A 1 289 GLY 289 314 314 GLY GLY A . n A 1 290 PRO 290 315 315 PRO PRO A . n A 1 291 GLU 291 316 316 GLU GLU A . n A 1 292 CYS 292 317 317 CYS CYS A . n A 1 293 ASP 293 318 318 ASP ASP A . n A 1 294 ARG 294 319 319 ARG ARG A . n A 1 295 CYS 295 320 320 CYS CYS A . n A 1 296 LYS 296 321 321 LYS LYS A . n A 1 297 PRO 297 322 322 PRO PRO A . n A 1 298 PHE 298 323 323 PHE PHE A . n A 1 299 HIS 299 324 324 HIS HIS A . n A 1 300 TYR 300 325 325 TYR TYR A . n A 1 301 ASP 301 326 326 ASP ASP A . n A 1 302 ARG 302 327 327 ARG ARG A . n A 1 303 PRO 303 328 328 PRO PRO A . n A 1 304 TRP 304 329 329 TRP TRP A . n A 1 305 GLN 305 330 330 GLN GLN A . n A 1 306 ARG 306 331 331 ARG ARG A . n A 1 307 ALA 307 332 332 ALA ALA A . n A 1 308 THR 308 333 333 THR THR A . n A 1 309 ALA 309 334 334 ALA ALA A . n A 1 310 ARG 310 335 335 ARG ARG A . n A 1 311 GLU 311 336 336 GLU GLU A . n A 1 312 ALA 312 337 337 ALA ALA A . n A 1 313 ASN 313 338 338 ASN ASN A . n A 1 314 GLU 314 339 339 GLU GLU A . n A 1 315 CYS 315 340 340 CYS CYS A . n A 1 316 VAL 316 341 341 VAL VAL A . n A 1 317 ALA 317 342 342 ALA ALA A . n A 1 318 CYS 318 343 343 CYS CYS A . n A 1 319 ASN 319 344 344 ASN ASN A . n A 1 320 CYS 320 345 345 CYS CYS A . n A 1 321 ASN 321 346 346 ASN ASN A . n A 1 322 LEU 322 347 347 LEU LEU A . n A 1 323 HIS 323 348 348 HIS HIS A . n A 1 324 ALA 324 349 349 ALA ALA A . n A 1 325 ARG 325 350 350 ARG ARG A . n A 1 326 ARG 326 351 351 ARG ARG A . n A 1 327 CYS 327 352 352 CYS CYS A . n A 1 328 ARG 328 353 353 ARG ARG A . n A 1 329 PHE 329 354 354 PHE PHE A . n A 1 330 ASN 330 355 355 ASN ASN A . n A 1 331 MET 331 356 356 MET MET A . n A 1 332 GLU 332 357 357 GLU GLU A . n A 1 333 LEU 333 358 358 LEU LEU A . n A 1 334 TYR 334 359 359 TYR TYR A . n A 1 335 LYS 335 360 360 LYS LYS A . n A 1 336 LEU 336 361 361 LEU LEU A . n A 1 337 SER 337 362 362 SER SER A . n A 1 338 GLY 338 363 363 GLY GLY A . n A 1 339 ARG 339 364 364 ARG ARG A . n A 1 340 LYS 340 365 365 LYS LYS A . n A 1 341 SER 341 366 366 SER SER A . n A 1 342 GLY 342 367 367 GLY GLY A . n A 1 343 GLY 343 368 368 GLY GLY A . n A 1 344 VAL 344 369 369 VAL VAL A . n A 1 345 CYS 345 370 370 CYS CYS A . n A 1 346 LEU 346 371 371 LEU LEU A . n A 1 347 ASN 347 372 372 ASN ASN A . n A 1 348 CYS 348 373 373 CYS CYS A . n A 1 349 ARG 349 374 374 ARG ARG A . n A 1 350 HIS 350 375 375 HIS HIS A . n A 1 351 ASN 351 376 376 ASN ASN A . n A 1 352 THR 352 377 377 THR THR A . n A 1 353 ALA 353 378 378 ALA ALA A . n A 1 354 GLY 354 379 379 GLY GLY A . n A 1 355 ARG 355 380 380 ARG ARG A . n A 1 356 HIS 356 381 381 HIS HIS A . n A 1 357 CYS 357 382 382 CYS CYS A . n A 1 358 HIS 358 383 383 HIS HIS A . n A 1 359 TYR 359 384 384 TYR TYR A . n A 1 360 CYS 360 385 385 CYS CYS A . n A 1 361 LYS 361 386 386 LYS LYS A . n A 1 362 GLU 362 387 387 GLU GLU A . n A 1 363 GLY 363 388 388 GLY GLY A . n A 1 364 PHE 364 389 389 PHE PHE A . n A 1 365 TYR 365 390 390 TYR TYR A . n A 1 366 ARG 366 391 391 ARG ARG A . n A 1 367 ASP 367 392 392 ASP ASP A . n A 1 368 LEU 368 393 393 LEU LEU A . n A 1 369 SER 369 394 394 SER SER A . n A 1 370 LYS 370 395 395 LYS LYS A . n A 1 371 PRO 371 396 396 PRO PRO A . n A 1 372 ILE 372 397 397 ILE ILE A . n A 1 373 SER 373 398 398 SER SER A . n A 1 374 HIS 374 399 399 HIS HIS A . n A 1 375 ARG 375 400 400 ARG ARG A . n A 1 376 LYS 376 401 401 LYS LYS A . n A 1 377 ALA 377 402 402 ALA ALA A . n A 1 378 CYS 378 403 403 CYS CYS A . n A 1 379 LYS 379 404 404 LYS LYS A . n A 1 380 GLU 380 405 405 GLU GLU A . n A 1 381 CYS 381 406 406 CYS CYS A . n A 1 382 ASP 382 407 407 ASP ASP A . n A 1 383 CYS 383 408 408 CYS CYS A . n A 1 384 HIS 384 409 409 HIS HIS A . n A 1 385 PRO 385 410 410 PRO PRO A . n A 1 386 VAL 386 411 411 VAL VAL A . n A 1 387 GLY 387 412 412 GLY GLY A . n A 1 388 ALA 388 413 413 ALA ALA A . n A 1 389 ALA 389 414 414 ALA ALA A . n A 1 390 GLY 390 415 415 GLY GLY A . n A 1 391 GLN 391 416 416 GLN GLN A . n A 1 392 THR 392 417 417 THR THR A . n A 1 393 CYS 393 418 418 CYS CYS A . n A 1 394 ASN 394 419 419 ASN ASN A . n A 1 395 GLN 395 420 420 GLN GLN A . n A 1 396 THR 396 421 421 THR THR A . n A 1 397 THR 397 422 422 THR THR A . n A 1 398 GLY 398 423 423 GLY GLY A . n A 1 399 GLN 399 424 424 GLN GLN A . n A 1 400 CYS 400 425 425 CYS CYS A . n A 1 401 PRO 401 426 426 PRO PRO A . n A 1 402 CYS 402 427 427 CYS CYS A . n A 1 403 LYS 403 428 428 LYS LYS A . n A 1 404 ASP 404 429 429 ASP ASP A . n A 1 405 GLY 405 430 430 GLY GLY A . n A 1 406 VAL 406 431 431 VAL VAL A . n A 1 407 THR 407 432 432 THR THR A . n A 1 408 GLY 408 433 433 GLY GLY A . n A 1 409 ILE 409 434 434 ILE ILE A . n A 1 410 THR 410 435 435 THR THR A . n A 1 411 CYS 411 436 436 CYS CYS A . n A 1 412 ASN 412 437 437 ASN ASN A . n A 1 413 ARG 413 438 438 ARG ARG A . n A 1 414 CYS 414 439 439 CYS CYS A . n A 1 415 ALA 415 440 440 ALA ALA A . n A 1 416 LYS 416 441 441 LYS LYS A . n A 1 417 GLY 417 442 442 GLY GLY A . n A 1 418 TYR 418 443 443 TYR TYR A . n A 1 419 GLN 419 444 444 GLN GLN A . n A 1 420 GLN 420 445 445 GLN GLN A . n A 1 421 SER 421 446 446 SER SER A . n A 1 422 ARG 422 447 447 ARG ARG A . n A 1 423 SER 423 448 448 SER SER A . n A 1 424 PRO 424 449 449 PRO PRO A . n A 1 425 ILE 425 450 450 ILE ILE A . n A 1 426 ALA 426 451 451 ALA ALA A . n A 1 427 PRO 427 452 452 PRO PRO A . n A 1 428 CYS 428 453 453 CYS CYS A . n A 1 429 ILE 429 454 454 ILE ILE A . n A 1 430 LYS 430 455 455 LYS LYS A . n A 1 431 ILE 431 456 456 ILE ILE A . n A 1 432 PRO 432 457 457 PRO PRO A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAG 1 501 971 NAG NAG A . C 2 NAG 1 502 1181 NAG NAG A . D 2 NAG 1 503 1331 NAG NAG A . E 3 CA 1 504 1 CA CA A . F 4 CL 1 505 1 CL CL A . G 4 CL 1 506 2 CL CL A . H 5 MG 1 507 1 MG MG A . I 6 HOH 1 601 67 HOH HOH A . I 6 HOH 2 602 11 HOH HOH A . I 6 HOH 3 603 65 HOH HOH A . I 6 HOH 4 604 81 HOH HOH A . I 6 HOH 5 605 28 HOH HOH A . I 6 HOH 6 606 2 HOH HOH A . I 6 HOH 7 607 8 HOH HOH A . I 6 HOH 8 608 15 HOH HOH A . I 6 HOH 9 609 9 HOH HOH A . I 6 HOH 10 610 22 HOH HOH A . I 6 HOH 11 611 79 HOH HOH A . I 6 HOH 12 612 80 HOH HOH A . I 6 HOH 13 613 25 HOH HOH A . I 6 HOH 14 614 7 HOH HOH A . I 6 HOH 15 615 17 HOH HOH A . I 6 HOH 16 616 58 HOH HOH A . I 6 HOH 17 617 27 HOH HOH A . I 6 HOH 18 618 72 HOH HOH A . I 6 HOH 19 619 45 HOH HOH A . I 6 HOH 20 620 78 HOH HOH A . I 6 HOH 21 621 57 HOH HOH A . I 6 HOH 22 622 77 HOH HOH A . I 6 HOH 23 623 76 HOH HOH A . I 6 HOH 24 624 66 HOH HOH A . I 6 HOH 25 625 30 HOH HOH A . I 6 HOH 26 626 52 HOH HOH A . I 6 HOH 27 627 1 HOH HOH A . I 6 HOH 28 628 3 HOH HOH A . I 6 HOH 29 629 4 HOH HOH A . I 6 HOH 30 630 5 HOH HOH A . I 6 HOH 31 631 6 HOH HOH A . I 6 HOH 32 632 10 HOH HOH A . I 6 HOH 33 633 12 HOH HOH A . I 6 HOH 34 634 14 HOH HOH A . I 6 HOH 35 635 16 HOH HOH A . I 6 HOH 36 636 18 HOH HOH A . I 6 HOH 37 637 19 HOH HOH A . I 6 HOH 38 638 20 HOH HOH A . I 6 HOH 39 639 21 HOH HOH A . I 6 HOH 40 640 23 HOH HOH A . I 6 HOH 41 641 24 HOH HOH A . I 6 HOH 42 642 26 HOH HOH A . I 6 HOH 43 643 29 HOH HOH A . I 6 HOH 44 644 31 HOH HOH A . I 6 HOH 45 645 32 HOH HOH A . I 6 HOH 46 646 33 HOH HOH A . I 6 HOH 47 647 34 HOH HOH A . I 6 HOH 48 648 35 HOH HOH A . I 6 HOH 49 649 37 HOH HOH A . I 6 HOH 50 650 38 HOH HOH A . I 6 HOH 51 651 39 HOH HOH A . I 6 HOH 52 652 41 HOH HOH A . I 6 HOH 53 653 42 HOH HOH A . I 6 HOH 54 654 44 HOH HOH A . I 6 HOH 55 655 47 HOH HOH A . I 6 HOH 56 656 48 HOH HOH A . I 6 HOH 57 657 49 HOH HOH A . I 6 HOH 58 658 50 HOH HOH A . I 6 HOH 59 659 51 HOH HOH A . I 6 HOH 60 660 53 HOH HOH A . I 6 HOH 61 661 54 HOH HOH A . I 6 HOH 62 662 56 HOH HOH A . I 6 HOH 63 663 59 HOH HOH A . I 6 HOH 64 664 60 HOH HOH A . I 6 HOH 65 665 61 HOH HOH A . I 6 HOH 66 666 63 HOH HOH A . I 6 HOH 67 667 64 HOH HOH A . I 6 HOH 68 668 68 HOH HOH A . I 6 HOH 69 669 69 HOH HOH A . I 6 HOH 70 670 70 HOH HOH A . I 6 HOH 71 671 71 HOH HOH A . I 6 HOH 72 672 73 HOH HOH A . I 6 HOH 73 673 75 HOH HOH A . I 6 HOH 74 674 82 HOH HOH A . I 6 HOH 75 675 83 HOH HOH A . I 6 HOH 76 676 84 HOH HOH A . I 6 HOH 77 677 85 HOH HOH A . I 6 HOH 78 678 86 HOH HOH A . I 6 HOH 79 679 87 HOH HOH A . I 6 HOH 80 680 90 HOH HOH A . I 6 HOH 81 681 91 HOH HOH A . I 6 HOH 82 682 92 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 264 ? CG ? A GLU 239 CG 2 1 Y 1 A GLU 264 ? CD ? A GLU 239 CD 3 1 Y 1 A GLU 264 ? OE1 ? A GLU 239 OE1 4 1 Y 1 A GLU 264 ? OE2 ? A GLU 239 OE2 5 1 Y 1 A ASP 265 ? CG ? A ASP 240 CG 6 1 Y 1 A ASP 265 ? OD1 ? A ASP 240 OD1 7 1 Y 1 A ASP 265 ? OD2 ? A ASP 240 OD2 # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(phenix.refine: 1.8.2_1309)' 1 ? 'data collection' ? ? ? ? ? ? ? ? ? ? ? ADSC ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.14 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 # _cell.entry_id 4PLM _cell.length_a 62.627 _cell.length_b 62.627 _cell.length_c 269.788 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4PLM _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 4PLM _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.27 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 62.39 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'NaoAc, NaCacodylate' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 298 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'MAR CCD 165 mm' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2000-01-01 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9792 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'NSLS BEAMLINE X9A' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9792 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline X9A _diffrn_source.pdbx_synchrotron_site NSLS # _reflns.B_iso_Wilson_estimate 63.720 _reflns.entry_id 4PLM _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.700 _reflns.d_resolution_low 50.000 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 17693 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 98.800 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 5.200 _reflns.pdbx_Rmerge_I_obs 0.085 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI 23.281 _reflns.pdbx_netI_over_sigmaI 11.300 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 1.682 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 92454 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 2.700 2.800 ? ? ? ? ? 1702 ? 97.800 ? ? ? ? ? ? ? ? ? ? ? ? ? 5.100 ? 1.397 ? ? ? ? 0 1 1 ? ? 2.800 2.910 ? ? ? ? ? 1721 ? 99.500 ? ? ? ? 0.734 ? ? ? ? ? ? ? ? 5.400 ? 1.411 ? ? ? ? 0 2 1 ? ? 2.910 3.040 ? ? ? ? ? 1745 ? 99.800 ? ? ? ? 0.522 ? ? ? ? ? ? ? ? 5.400 ? 1.447 ? ? ? ? 0 3 1 ? ? 3.040 3.200 ? ? ? ? ? 1777 ? 99.900 ? ? ? ? 0.335 ? ? ? ? ? ? ? ? 5.400 ? 1.463 ? ? ? ? 0 4 1 ? ? 3.200 3.400 ? ? ? ? ? 1738 ? 99.900 ? ? ? ? 0.219 ? ? ? ? ? ? ? ? 5.300 ? 1.600 ? ? ? ? 0 5 1 ? ? 3.400 3.660 ? ? ? ? ? 1768 ? 99.700 ? ? ? ? 0.135 ? ? ? ? ? ? ? ? 5.400 ? 1.654 ? ? ? ? 0 6 1 ? ? 3.660 4.030 ? ? ? ? ? 1773 ? 99.600 ? ? ? ? 0.090 ? ? ? ? ? ? ? ? 5.300 ? 1.867 ? ? ? ? 0 7 1 ? ? 4.030 4.620 ? ? ? ? ? 1796 ? 99.800 ? ? ? ? 0.065 ? ? ? ? ? ? ? ? 5.200 ? 2.023 ? ? ? ? 0 8 1 ? ? 4.620 5.810 ? ? ? ? ? 1811 ? 98.900 ? ? ? ? 0.054 ? ? ? ? ? ? ? ? 5.200 ? 2.067 ? ? ? ? 0 9 1 ? ? 5.810 50.000 ? ? ? ? ? 1862 ? 93.800 ? ? ? ? 0.036 ? ? ? ? ? ? ? ? 4.800 ? 1.896 ? ? ? ? 0 10 1 ? ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4PLM _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 28902 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 28.639 _refine.ls_d_res_high 2.801 _refine.ls_percent_reflns_obs 99.15 _refine.ls_R_factor_obs 0.1989 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1923 _refine.ls_R_factor_R_free 0.2571 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.08 _refine.ls_number_reflns_R_free 2913 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.39 _refine.pdbx_overall_phase_error 30.43 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 2.801 _refine_hist.d_res_low 28.639 _refine_hist.pdbx_number_atoms_ligand 46 _refine_hist.number_atoms_solvent 85 _refine_hist.number_atoms_total 3386 _refine_hist.pdbx_number_residues_total 416 _refine_hist.pdbx_B_iso_mean_ligand 112.41 _refine_hist.pdbx_B_iso_mean_solvent 56.05 _refine_hist.pdbx_number_atoms_protein 3255 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.009 ? ? 3398 'X-RAY DIFFRACTION' ? f_angle_d 1.401 ? ? 4578 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 17.143 ? ? 1259 'X-RAY DIFFRACTION' ? f_chiral_restr 0.116 ? ? 485 'X-RAY DIFFRACTION' ? f_plane_restr 0.008 ? ? 604 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.number_reflns_obs 'X-RAY DIFFRACTION' . 2.801 2.8465 1308 0.3357 99.00 0.4315 . . 142 . . . . 'X-RAY DIFFRACTION' . 2.8465 2.8955 1185 0.3110 99.00 0.4035 . . 130 . . . . 'X-RAY DIFFRACTION' . 2.8955 2.9481 1242 0.3215 99.00 0.3735 . . 138 . . . . 'X-RAY DIFFRACTION' . 2.9481 3.0047 1283 0.2909 99.00 0.3788 . . 139 . . . . 'X-RAY DIFFRACTION' . 3.0047 3.0660 1186 0.2793 99.00 0.3324 . . 133 . . . . 'X-RAY DIFFRACTION' . 3.0660 3.1326 1285 0.2613 99.00 0.3331 . . 153 . . . . 'X-RAY DIFFRACTION' . 3.1326 3.2054 1170 0.2666 100.00 0.3622 . . 135 . . . . 'X-RAY DIFFRACTION' . 3.2054 3.2854 1270 0.2457 99.00 0.3061 . . 150 . . . . 'X-RAY DIFFRACTION' . 3.2854 3.3741 1238 0.2115 100.00 0.3429 . . 134 . . . . 'X-RAY DIFFRACTION' . 3.3741 3.4732 1265 0.1939 100.00 0.2440 . . 146 . . . . 'X-RAY DIFFRACTION' . 3.4732 3.5851 1205 0.1832 99.00 0.2544 . . 130 . . . . 'X-RAY DIFFRACTION' . 3.5851 3.7130 1262 0.1744 99.00 0.2303 . . 137 . . . . 'X-RAY DIFFRACTION' . 3.7130 3.8614 1244 0.1757 100.00 0.2743 . . 144 . . . . 'X-RAY DIFFRACTION' . 3.8614 4.0366 1215 0.1708 99.00 0.2283 . . 140 . . . . 'X-RAY DIFFRACTION' . 4.0366 4.2488 1245 0.1622 99.00 0.2649 . . 139 . . . . 'X-RAY DIFFRACTION' . 4.2488 4.5141 1271 0.1437 100.00 0.2074 . . 136 . . . . 'X-RAY DIFFRACTION' . 4.5141 4.8610 1231 0.1328 100.00 0.1493 . . 151 . . . . 'X-RAY DIFFRACTION' . 4.8610 5.3474 1226 0.1452 100.00 0.2065 . . 132 . . . . 'X-RAY DIFFRACTION' . 5.3474 6.1146 1248 0.1696 99.00 0.2501 . . 138 . . . . 'X-RAY DIFFRACTION' . 6.1146 7.6790 1234 0.1965 99.00 0.2650 . . 140 . . . . 'X-RAY DIFFRACTION' . 7.6790 28.6403 1176 0.2071 94.00 0.2507 . . 126 . . . . # _struct.entry_id 4PLM _struct.title 'Crystal Structure of Chicken Netrin-1 (LN-LE3)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 4PLM _struct_keywords.text 'elongated, cysteine rich, glycoprotein, PROTEIN BINDING' _struct_keywords.pdbx_keywords 'PROTEIN BINDING' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 4 ? G N N 4 ? H N N 5 ? I N N 6 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code NET1_CHICK _struct_ref.pdbx_db_accession Q90922 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GYPGLNMFAVQTAQPDPCYDEHGLPRRCIPDFVNSAFGKEVKVSSTCGKPPSRYCVVTEKGEEQVRSCHLCNASDPKRAH PPSFLTDLNNPHNLTCWQSDSYVQYPHNVTLTLSLGKKFEVTYVSLQFCSPRPESMAIYKSMDYGKTWVPFQFYSTQCRK MYNKPSRAAITKQNEQEAICTDSHTDVRPLSGGLIAFSTLDGRPTAHDFDNSPVLQDWVTATDIKVTFSRLHTFGDENED DSELARDSYFYAVSDLQVGGRCKCNGHASRCVRDRDDNLVCDCKHNTAGPECDRCKPFHYDRPWQRATAREANECVACNC NLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDLSKPISHRKACKECDCHPVGAAGQTCNQTTGQC PCKDGVTGITCNRCAKGYQQSRSPIAPCIKIP ; _struct_ref.pdbx_align_begin 26 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4PLM _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 432 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q90922 _struct_ref_seq.db_align_beg 26 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 457 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 26 _struct_ref_seq.pdbx_auth_seq_align_end 457 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 2 'ABSA (A^2)' 4290 ? 2 MORE -72 ? 2 'SSA (A^2)' 45430 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D,E,F,G,H,I 2 1,2 A,B,C,D,E,F,G,H,I # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 6_555 -x,-x+y,-z+2/3 -0.5000000000 -0.8660254038 0.0000000000 0.0000000000 -0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 179.8586666667 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 75 ? ALA A 79 ? ASP A 100 ALA A 104 5 ? 5 HELX_P HELX_P2 AA2 PRO A 81 ? LEU A 85 ? PRO A 106 LEU A 110 5 ? 5 HELX_P HELX_P3 AA3 GLN A 157 ? ASN A 163 ? GLN A 182 ASN A 188 1 ? 7 HELX_P HELX_P4 AA4 THR A 205 ? ASN A 211 ? THR A 230 ASN A 236 5 ? 7 HELX_P HELX_P5 AA5 SER A 212 ? VAL A 219 ? SER A 237 VAL A 244 1 ? 8 HELX_P HELX_P6 AA6 ASN A 330 ? SER A 337 ? ASN A 355 SER A 362 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 18 SG ? ? ? 1_555 A CYS 28 SG ? ? A CYS 43 A CYS 53 1_555 ? ? ? ? ? ? ? 2.035 ? ? disulf2 disulf ? ? A CYS 47 SG ? ? ? 1_555 A CYS 71 SG ? ? A CYS 72 A CYS 96 1_555 ? ? ? ? ? ? ? 2.013 ? ? disulf3 disulf ? ? A CYS 55 SG ? ? ? 1_555 A CYS 68 SG ? ? A CYS 80 A CYS 93 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf4 disulf ? ? A CYS 96 SG ? ? ? 1_555 A CYS 129 SG ? ? A CYS 121 A CYS 154 1_555 ? ? ? ? ? ? ? 2.017 ? ? disulf5 disulf ? ? A CYS 158 SG ? ? ? 1_555 A CYS 180 SG ? ? A CYS 183 A CYS 205 1_555 ? ? ? ? ? ? ? 2.042 ? ? disulf6 disulf ? ? A CYS 262 SG ? ? ? 1_555 A CYS 271 SG ? ? A CYS 287 A CYS 296 1_555 ? ? ? ? ? ? ? 2.040 ? ? disulf7 disulf ? ? A CYS 264 SG ? ? ? 1_555 A CYS 281 SG ? ? A CYS 289 A CYS 306 1_555 ? ? ? ? ? ? ? 2.034 ? ? disulf8 disulf ? ? A CYS 283 SG ? ? ? 1_555 A CYS 292 SG ? ? A CYS 308 A CYS 317 1_555 ? ? ? ? ? ? ? 2.033 ? ? disulf9 disulf ? ? A CYS 295 SG ? ? ? 1_555 A CYS 315 SG ? ? A CYS 320 A CYS 340 1_555 ? ? ? ? ? ? ? 2.037 ? ? disulf10 disulf ? ? A CYS 318 SG ? ? ? 1_555 A CYS 327 SG ? ? A CYS 343 A CYS 352 1_555 ? ? ? ? ? ? ? 2.029 ? ? disulf11 disulf ? ? A CYS 320 SG ? ? ? 1_555 A CYS 345 SG ? ? A CYS 345 A CYS 370 1_555 ? ? ? ? ? ? ? 2.036 ? ? disulf12 disulf ? ? A CYS 348 SG ? ? ? 1_555 A CYS 357 SG ? ? A CYS 373 A CYS 382 1_555 ? ? ? ? ? ? ? 2.035 ? ? disulf13 disulf ? ? A CYS 360 SG ? ? ? 1_555 A CYS 378 SG ? ? A CYS 385 A CYS 403 1_555 ? ? ? ? ? ? ? 2.016 ? ? disulf14 disulf ? ? A CYS 381 SG ? ? ? 1_555 A CYS 393 SG ? ? A CYS 406 A CYS 418 1_555 ? ? ? ? ? ? ? 2.028 ? ? disulf15 disulf ? ? A CYS 383 SG ? ? ? 1_555 A CYS 400 SG ? ? A CYS 408 A CYS 425 1_555 ? ? ? ? ? ? ? 2.018 ? ? disulf16 disulf ? ? A CYS 402 SG ? ? ? 1_555 A CYS 411 SG ? ? A CYS 427 A CYS 436 1_555 ? ? ? ? ? ? ? 2.019 ? ? disulf17 disulf ? ? A CYS 414 SG ? ? ? 1_555 A CYS 428 SG ? ? A CYS 439 A CYS 453 1_555 ? ? ? ? ? ? ? 2.035 ? ? covale1 covale one ? A ASN 72 ND2 ? ? ? 1_555 B NAG . C1 ? ? A ASN 97 A NAG 501 1_555 ? ? ? ? ? ? ? 1.463 ? N-Glycosylation covale2 covale one ? A ASN 93 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 118 A NAG 502 1_555 ? ? ? ? ? ? ? 1.440 ? N-Glycosylation covale3 covale one ? A ASN 108 ND2 ? ? ? 1_555 D NAG . C1 ? ? A ASN 133 A NAG 503 1_555 ? ? ? ? ? ? ? 1.452 ? N-Glycosylation metalc1 metalc ? ? A PHE 84 O ? ? ? 1_555 E CA . CA ? ? A PHE 109 A CA 504 1_555 ? ? ? ? ? ? ? 2.389 ? ? metalc2 metalc ? ? A ASP 87 OD1 ? ? ? 1_555 E CA . CA ? ? A ASP 112 A CA 504 1_555 ? ? ? ? ? ? ? 2.417 ? ? metalc3 metalc ? ? A THR 95 O ? ? ? 1_555 E CA . CA ? ? A THR 120 A CA 504 1_555 ? ? ? ? ? ? ? 2.564 ? ? metalc4 metalc ? ? A THR 95 OG1 ? ? ? 1_555 E CA . CA ? ? A THR 120 A CA 504 1_555 ? ? ? ? ? ? ? 2.916 ? ? metalc5 metalc ? ? A GLN 98 OE1 ? ? ? 1_555 H MG . MG ? ? A GLN 123 A MG 507 1_555 ? ? ? ? ? ? ? 2.901 ? ? metalc6 metalc ? ? A SER 254 O ? ? ? 1_555 E CA . CA ? ? A SER 279 A CA 504 1_555 ? ? ? ? ? ? ? 2.301 ? ? metalc7 metalc ? ? E CA . CA ? ? ? 1_555 I HOH . O ? ? A CA 504 A HOH 656 1_555 ? ? ? ? ? ? ? 2.382 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? metalc ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A PHE 84 ? A PHE 109 ? 1_555 CA ? E CA . ? A CA 504 ? 1_555 OD1 ? A ASP 87 ? A ASP 112 ? 1_555 69.8 ? 2 O ? A PHE 84 ? A PHE 109 ? 1_555 CA ? E CA . ? A CA 504 ? 1_555 O ? A THR 95 ? A THR 120 ? 1_555 83.8 ? 3 OD1 ? A ASP 87 ? A ASP 112 ? 1_555 CA ? E CA . ? A CA 504 ? 1_555 O ? A THR 95 ? A THR 120 ? 1_555 125.3 ? 4 O ? A PHE 84 ? A PHE 109 ? 1_555 CA ? E CA . ? A CA 504 ? 1_555 OG1 ? A THR 95 ? A THR 120 ? 1_555 118.4 ? 5 OD1 ? A ASP 87 ? A ASP 112 ? 1_555 CA ? E CA . ? A CA 504 ? 1_555 OG1 ? A THR 95 ? A THR 120 ? 1_555 77.6 ? 6 O ? A THR 95 ? A THR 120 ? 1_555 CA ? E CA . ? A CA 504 ? 1_555 OG1 ? A THR 95 ? A THR 120 ? 1_555 74.4 ? 7 O ? A PHE 84 ? A PHE 109 ? 1_555 CA ? E CA . ? A CA 504 ? 1_555 O ? A SER 254 ? A SER 279 ? 1_555 77.0 ? 8 OD1 ? A ASP 87 ? A ASP 112 ? 1_555 CA ? E CA . ? A CA 504 ? 1_555 O ? A SER 254 ? A SER 279 ? 1_555 134.5 ? 9 O ? A THR 95 ? A THR 120 ? 1_555 CA ? E CA . ? A CA 504 ? 1_555 O ? A SER 254 ? A SER 279 ? 1_555 79.2 ? 10 OG1 ? A THR 95 ? A THR 120 ? 1_555 CA ? E CA . ? A CA 504 ? 1_555 O ? A SER 254 ? A SER 279 ? 1_555 147.2 ? 11 O ? A PHE 84 ? A PHE 109 ? 1_555 CA ? E CA . ? A CA 504 ? 1_555 O ? I HOH . ? A HOH 656 ? 1_555 170.2 ? 12 OD1 ? A ASP 87 ? A ASP 112 ? 1_555 CA ? E CA . ? A CA 504 ? 1_555 O ? I HOH . ? A HOH 656 ? 1_555 119.9 ? 13 O ? A THR 95 ? A THR 120 ? 1_555 CA ? E CA . ? A CA 504 ? 1_555 O ? I HOH . ? A HOH 656 ? 1_555 89.9 ? 14 OG1 ? A THR 95 ? A THR 120 ? 1_555 CA ? E CA . ? A CA 504 ? 1_555 O ? I HOH . ? A HOH 656 ? 1_555 66.6 ? 15 O ? A SER 254 ? A SER 279 ? 1_555 CA ? E CA . ? A CA 504 ? 1_555 O ? I HOH . ? A HOH 656 ? 1_555 94.5 ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 LYS 49 A . ? LYS 74 A PRO 50 A ? PRO 75 A 1 3.58 2 TYR 105 A . ? TYR 130 A PRO 106 A ? PRO 131 A 1 -9.34 3 VAL 187 A . ? VAL 212 A ARG 188 A ? ARG 213 A 1 4.89 4 ARG 188 A . ? ARG 213 A PRO 189 A ? PRO 214 A 1 -3.86 5 GLY 235 A . ? GLY 260 A ASP 236 A ? ASP 261 A 1 -20.19 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 3 ? AA2 ? 3 ? AA3 ? 6 ? AA4 ? 2 ? AA5 ? 2 ? AA6 ? 2 ? AA7 ? 2 ? AA8 ? 2 ? AA9 ? 2 ? AB1 ? 2 ? AB2 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA3 4 5 ? anti-parallel AA3 5 6 ? parallel AA4 1 2 ? anti-parallel AA5 1 2 ? anti-parallel AA6 1 2 ? anti-parallel AA7 1 2 ? anti-parallel AA8 1 2 ? anti-parallel AA9 1 2 ? anti-parallel AB1 1 2 ? anti-parallel AB2 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 33 ? ASN A 34 ? VAL A 58 ASN A 59 AA1 2 ALA A 252 ? CYS A 262 ? ALA A 277 CYS A 287 AA1 3 TRP A 97 ? GLN A 98 ? TRP A 122 GLN A 123 AA2 1 LYS A 42 ? VAL A 43 ? LYS A 67 VAL A 68 AA2 2 VAL A 109 ? PHE A 128 ? VAL A 134 PHE A 153 AA2 3 GLY A 193 ? SER A 198 ? GLY A 218 SER A 223 AA3 1 ALA A 252 ? CYS A 262 ? ALA A 277 CYS A 287 AA3 2 VAL A 109 ? PHE A 128 ? VAL A 134 PHE A 153 AA3 3 THR A 220 ? PHE A 228 ? THR A 245 PHE A 253 AA3 4 SER A 135 ? SER A 141 ? SER A 160 SER A 166 AA3 5 VAL A 149 ? SER A 155 ? VAL A 174 SER A 180 AA3 6 CYS A 180 ? THR A 181 ? CYS A 205 THR A 206 AA4 1 SER A 52 ? LYS A 60 ? SER A 77 LYS A 85 AA4 2 GLU A 63 ? CYS A 71 ? GLU A 88 CYS A 96 AA5 1 CYS A 271 ? ARG A 273 ? CYS A 296 ARG A 298 AA5 2 LEU A 279 ? CYS A 281 ? LEU A 304 CYS A 306 AA6 1 THR A 287 ? ALA A 288 ? THR A 312 ALA A 313 AA6 2 ARG A 294 ? CYS A 295 ? ARG A 319 CYS A 320 AA7 1 ARG A 326 ? PHE A 329 ? ARG A 351 PHE A 354 AA7 2 GLY A 343 ? LEU A 346 ? GLY A 368 LEU A 371 AA8 1 THR A 352 ? ALA A 353 ? THR A 377 ALA A 378 AA8 2 TYR A 359 ? CYS A 360 ? TYR A 384 CYS A 385 AA9 1 PHE A 364 ? ARG A 366 ? PHE A 389 ARG A 391 AA9 2 CYS A 378 ? GLU A 380 ? CYS A 403 GLU A 405 AB1 1 VAL A 406 ? THR A 407 ? VAL A 431 THR A 432 AB1 2 ARG A 413 ? CYS A 414 ? ARG A 438 CYS A 439 AB2 1 TYR A 418 ? GLN A 420 ? TYR A 443 GLN A 445 AB2 2 CYS A 428 ? LYS A 430 ? CYS A 453 LYS A 455 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N VAL A 33 ? N VAL A 58 O GLY A 260 ? O GLY A 285 AA1 2 3 O VAL A 253 ? O VAL A 278 N TRP A 97 ? N TRP A 122 AA2 1 2 N LYS A 42 ? N LYS A 67 O THR A 112 ? O THR A 137 AA2 2 3 N VAL A 124 ? N VAL A 149 O PHE A 197 ? O PHE A 222 AA3 1 2 O GLN A 257 ? O GLN A 282 N SER A 125 ? N SER A 150 AA3 2 3 N PHE A 119 ? N PHE A 144 O ALA A 221 ? O ALA A 246 AA3 3 4 O THR A 222 ? O THR A 247 N SER A 141 ? N SER A 166 AA3 4 5 N ILE A 138 ? N ILE A 163 O PHE A 151 ? O PHE A 176 AA3 5 6 N SER A 155 ? N SER A 180 O THR A 181 ? O THR A 206 AA4 1 2 N LYS A 60 ? N LYS A 85 O GLU A 63 ? O GLU A 88 AA5 1 2 N VAL A 272 ? N VAL A 297 O VAL A 280 ? O VAL A 305 AA6 1 2 N ALA A 288 ? N ALA A 313 O ARG A 294 ? O ARG A 319 AA7 1 2 N ARG A 328 ? N ARG A 353 O VAL A 344 ? O VAL A 369 AA8 1 2 N ALA A 353 ? N ALA A 378 O TYR A 359 ? O TYR A 384 AA9 1 2 N TYR A 365 ? N TYR A 390 O LYS A 379 ? O LYS A 404 AB1 1 2 N THR A 407 ? N THR A 432 O ARG A 413 ? O ARG A 438 AB2 1 2 N GLN A 419 ? N GLN A 444 O ILE A 429 ? O ILE A 454 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 601 ? ? O A HOH 603 ? ? 2.06 2 1 O A HOH 603 ? ? O A HOH 624 ? ? 2.07 3 1 ND2 A ASN 118 ? ? C2 A NAG 502 ? ? 2.11 4 1 NE2 A HIS 324 ? ? O A HOH 601 ? ? 2.13 5 1 OH A TYR 127 ? ? O A HOH 602 ? ? 2.17 6 1 NH2 A ARG 192 ? ? OD1 A ASP 207 ? ? 2.18 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLN A 129 ? ? 173.61 158.62 2 1 HIS A 132 ? ? 155.60 134.00 3 1 SER A 254 ? ? -103.99 -89.84 4 1 ASP A 266 ? ? 50.30 -120.49 5 1 PHE A 323 ? ? 69.07 -1.88 6 1 LYS A 365 ? ? -101.46 -62.88 # loop_ _pdbx_validate_peptide_omega.id _pdbx_validate_peptide_omega.PDB_model_num _pdbx_validate_peptide_omega.auth_comp_id_1 _pdbx_validate_peptide_omega.auth_asym_id_1 _pdbx_validate_peptide_omega.auth_seq_id_1 _pdbx_validate_peptide_omega.PDB_ins_code_1 _pdbx_validate_peptide_omega.label_alt_id_1 _pdbx_validate_peptide_omega.auth_comp_id_2 _pdbx_validate_peptide_omega.auth_asym_id_2 _pdbx_validate_peptide_omega.auth_seq_id_2 _pdbx_validate_peptide_omega.PDB_ins_code_2 _pdbx_validate_peptide_omega.label_alt_id_2 _pdbx_validate_peptide_omega.omega 1 1 GLU A 84 ? ? LYS A 85 ? ? 148.47 2 1 LYS A 85 ? ? GLY A 86 ? ? -147.69 # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined -33.0828 3.7588 22.7374 0.5369 0.4073 0.3736 0.0318 -0.0353 -0.0279 2.5748 4.5461 4.9281 -0.2343 0.2120 1.6445 0.0294 0.0018 -0.5363 -0.0400 0.0537 -0.1214 0.4674 -0.0698 -0.0390 'X-RAY DIFFRACTION' 2 ? refined -19.7163 26.7398 62.9174 0.5405 0.7020 0.3855 -0.0283 -0.0550 -0.1372 0.0397 0.7145 3.1371 0.0751 0.5975 0.8520 0.0457 0.1072 -0.0858 -0.3432 -0.0308 -0.0765 -0.4906 -0.0487 0.0457 'X-RAY DIFFRACTION' 3 ? refined -13.2825 52.9017 113.5523 1.7799 1.2725 0.7277 -0.3573 -0.1843 -0.0715 2.0000 2.0000 2.0000 2.0000 -5.7603 4.3710 -2.5986 -1.8799 0.5639 -1.2777 2.2659 -0.4032 2.7211 1.2861 0.3613 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 40 through 265 ) ; 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 266 through 456 ) ; 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 457 through 457 ) ; # _phasing.method MR # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 681 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance . _pdbx_distant_solvent_atoms.neighbor_ligand_distance 7.02 _pdbx_distant_solvent_atoms.label_comp_id ? _pdbx_distant_solvent_atoms.label_asym_id ? _pdbx_distant_solvent_atoms.label_seq_id ? _pdbx_distant_solvent_atoms.label_atom_id ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 26 ? A GLY 1 2 1 Y 1 A TYR 27 ? A TYR 2 3 1 Y 1 A PRO 28 ? A PRO 3 4 1 Y 1 A GLY 29 ? A GLY 4 5 1 Y 1 A LEU 30 ? A LEU 5 6 1 Y 1 A ASN 31 ? A ASN 6 7 1 Y 1 A MET 32 ? A MET 7 8 1 Y 1 A PHE 33 ? A PHE 8 9 1 Y 1 A ALA 34 ? A ALA 9 10 1 Y 1 A VAL 35 ? A VAL 10 11 1 Y 1 A GLN 36 ? A GLN 11 12 1 Y 1 A THR 37 ? A THR 12 13 1 Y 1 A ALA 38 ? A ALA 13 14 1 Y 1 A GLN 39 ? A GLN 14 15 1 Y 1 A GLU 262 ? A GLU 237 16 1 Y 1 A ASN 263 ? A ASN 238 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CA CA CA N N 74 CL CL CL N N 75 CYS N N N N 76 CYS CA C N R 77 CYS C C N N 78 CYS O O N N 79 CYS CB C N N 80 CYS SG S N N 81 CYS OXT O N N 82 CYS H H N N 83 CYS H2 H N N 84 CYS HA H N N 85 CYS HB2 H N N 86 CYS HB3 H N N 87 CYS HG H N N 88 CYS HXT H N N 89 GLN N N N N 90 GLN CA C N S 91 GLN C C N N 92 GLN O O N N 93 GLN CB C N N 94 GLN CG C N N 95 GLN CD C N N 96 GLN OE1 O N N 97 GLN NE2 N N N 98 GLN OXT O N N 99 GLN H H N N 100 GLN H2 H N N 101 GLN HA H N N 102 GLN HB2 H N N 103 GLN HB3 H N N 104 GLN HG2 H N N 105 GLN HG3 H N N 106 GLN HE21 H N N 107 GLN HE22 H N N 108 GLN HXT H N N 109 GLU N N N N 110 GLU CA C N S 111 GLU C C N N 112 GLU O O N N 113 GLU CB C N N 114 GLU CG C N N 115 GLU CD C N N 116 GLU OE1 O N N 117 GLU OE2 O N N 118 GLU OXT O N N 119 GLU H H N N 120 GLU H2 H N N 121 GLU HA H N N 122 GLU HB2 H N N 123 GLU HB3 H N N 124 GLU HG2 H N N 125 GLU HG3 H N N 126 GLU HE2 H N N 127 GLU HXT H N N 128 GLY N N N N 129 GLY CA C N N 130 GLY C C N N 131 GLY O O N N 132 GLY OXT O N N 133 GLY H H N N 134 GLY H2 H N N 135 GLY HA2 H N N 136 GLY HA3 H N N 137 GLY HXT H N N 138 HIS N N N N 139 HIS CA C N S 140 HIS C C N N 141 HIS O O N N 142 HIS CB C N N 143 HIS CG C Y N 144 HIS ND1 N Y N 145 HIS CD2 C Y N 146 HIS CE1 C Y N 147 HIS NE2 N Y N 148 HIS OXT O N N 149 HIS H H N N 150 HIS H2 H N N 151 HIS HA H N N 152 HIS HB2 H N N 153 HIS HB3 H N N 154 HIS HD1 H N N 155 HIS HD2 H N N 156 HIS HE1 H N N 157 HIS HE2 H N N 158 HIS HXT H N N 159 HOH O O N N 160 HOH H1 H N N 161 HOH H2 H N N 162 ILE N N N N 163 ILE CA C N S 164 ILE C C N N 165 ILE O O N N 166 ILE CB C N S 167 ILE CG1 C N N 168 ILE CG2 C N N 169 ILE CD1 C N N 170 ILE OXT O N N 171 ILE H H N N 172 ILE H2 H N N 173 ILE HA H N N 174 ILE HB H N N 175 ILE HG12 H N N 176 ILE HG13 H N N 177 ILE HG21 H N N 178 ILE HG22 H N N 179 ILE HG23 H N N 180 ILE HD11 H N N 181 ILE HD12 H N N 182 ILE HD13 H N N 183 ILE HXT H N N 184 LEU N N N N 185 LEU CA C N S 186 LEU C C N N 187 LEU O O N N 188 LEU CB C N N 189 LEU CG C N N 190 LEU CD1 C N N 191 LEU CD2 C N N 192 LEU OXT O N N 193 LEU H H N N 194 LEU H2 H N N 195 LEU HA H N N 196 LEU HB2 H N N 197 LEU HB3 H N N 198 LEU HG H N N 199 LEU HD11 H N N 200 LEU HD12 H N N 201 LEU HD13 H N N 202 LEU HD21 H N N 203 LEU HD22 H N N 204 LEU HD23 H N N 205 LEU HXT H N N 206 LYS N N N N 207 LYS CA C N S 208 LYS C C N N 209 LYS O O N N 210 LYS CB C N N 211 LYS CG C N N 212 LYS CD C N N 213 LYS CE C N N 214 LYS NZ N N N 215 LYS OXT O N N 216 LYS H H N N 217 LYS H2 H N N 218 LYS HA H N N 219 LYS HB2 H N N 220 LYS HB3 H N N 221 LYS HG2 H N N 222 LYS HG3 H N N 223 LYS HD2 H N N 224 LYS HD3 H N N 225 LYS HE2 H N N 226 LYS HE3 H N N 227 LYS HZ1 H N N 228 LYS HZ2 H N N 229 LYS HZ3 H N N 230 LYS HXT H N N 231 MET N N N N 232 MET CA C N S 233 MET C C N N 234 MET O O N N 235 MET CB C N N 236 MET CG C N N 237 MET SD S N N 238 MET CE C N N 239 MET OXT O N N 240 MET H H N N 241 MET H2 H N N 242 MET HA H N N 243 MET HB2 H N N 244 MET HB3 H N N 245 MET HG2 H N N 246 MET HG3 H N N 247 MET HE1 H N N 248 MET HE2 H N N 249 MET HE3 H N N 250 MET HXT H N N 251 MG MG MG N N 252 NAG C1 C N R 253 NAG C2 C N R 254 NAG C3 C N R 255 NAG C4 C N S 256 NAG C5 C N R 257 NAG C6 C N N 258 NAG C7 C N N 259 NAG C8 C N N 260 NAG N2 N N N 261 NAG O1 O N N 262 NAG O3 O N N 263 NAG O4 O N N 264 NAG O5 O N N 265 NAG O6 O N N 266 NAG O7 O N N 267 NAG H1 H N N 268 NAG H2 H N N 269 NAG H3 H N N 270 NAG H4 H N N 271 NAG H5 H N N 272 NAG H61 H N N 273 NAG H62 H N N 274 NAG H81 H N N 275 NAG H82 H N N 276 NAG H83 H N N 277 NAG HN2 H N N 278 NAG HO1 H N N 279 NAG HO3 H N N 280 NAG HO4 H N N 281 NAG HO6 H N N 282 PHE N N N N 283 PHE CA C N S 284 PHE C C N N 285 PHE O O N N 286 PHE CB C N N 287 PHE CG C Y N 288 PHE CD1 C Y N 289 PHE CD2 C Y N 290 PHE CE1 C Y N 291 PHE CE2 C Y N 292 PHE CZ C Y N 293 PHE OXT O N N 294 PHE H H N N 295 PHE H2 H N N 296 PHE HA H N N 297 PHE HB2 H N N 298 PHE HB3 H N N 299 PHE HD1 H N N 300 PHE HD2 H N N 301 PHE HE1 H N N 302 PHE HE2 H N N 303 PHE HZ H N N 304 PHE HXT H N N 305 PRO N N N N 306 PRO CA C N S 307 PRO C C N N 308 PRO O O N N 309 PRO CB C N N 310 PRO CG C N N 311 PRO CD C N N 312 PRO OXT O N N 313 PRO H H N N 314 PRO HA H N N 315 PRO HB2 H N N 316 PRO HB3 H N N 317 PRO HG2 H N N 318 PRO HG3 H N N 319 PRO HD2 H N N 320 PRO HD3 H N N 321 PRO HXT H N N 322 SER N N N N 323 SER CA C N S 324 SER C C N N 325 SER O O N N 326 SER CB C N N 327 SER OG O N N 328 SER OXT O N N 329 SER H H N N 330 SER H2 H N N 331 SER HA H N N 332 SER HB2 H N N 333 SER HB3 H N N 334 SER HG H N N 335 SER HXT H N N 336 THR N N N N 337 THR CA C N S 338 THR C C N N 339 THR O O N N 340 THR CB C N R 341 THR OG1 O N N 342 THR CG2 C N N 343 THR OXT O N N 344 THR H H N N 345 THR H2 H N N 346 THR HA H N N 347 THR HB H N N 348 THR HG1 H N N 349 THR HG21 H N N 350 THR HG22 H N N 351 THR HG23 H N N 352 THR HXT H N N 353 TRP N N N N 354 TRP CA C N S 355 TRP C C N N 356 TRP O O N N 357 TRP CB C N N 358 TRP CG C Y N 359 TRP CD1 C Y N 360 TRP CD2 C Y N 361 TRP NE1 N Y N 362 TRP CE2 C Y N 363 TRP CE3 C Y N 364 TRP CZ2 C Y N 365 TRP CZ3 C Y N 366 TRP CH2 C Y N 367 TRP OXT O N N 368 TRP H H N N 369 TRP H2 H N N 370 TRP HA H N N 371 TRP HB2 H N N 372 TRP HB3 H N N 373 TRP HD1 H N N 374 TRP HE1 H N N 375 TRP HE3 H N N 376 TRP HZ2 H N N 377 TRP HZ3 H N N 378 TRP HH2 H N N 379 TRP HXT H N N 380 TYR N N N N 381 TYR CA C N S 382 TYR C C N N 383 TYR O O N N 384 TYR CB C N N 385 TYR CG C Y N 386 TYR CD1 C Y N 387 TYR CD2 C Y N 388 TYR CE1 C Y N 389 TYR CE2 C Y N 390 TYR CZ C Y N 391 TYR OH O N N 392 TYR OXT O N N 393 TYR H H N N 394 TYR H2 H N N 395 TYR HA H N N 396 TYR HB2 H N N 397 TYR HB3 H N N 398 TYR HD1 H N N 399 TYR HD2 H N N 400 TYR HE1 H N N 401 TYR HE2 H N N 402 TYR HH H N N 403 TYR HXT H N N 404 VAL N N N N 405 VAL CA C N S 406 VAL C C N N 407 VAL O O N N 408 VAL CB C N N 409 VAL CG1 C N N 410 VAL CG2 C N N 411 VAL OXT O N N 412 VAL H H N N 413 VAL H2 H N N 414 VAL HA H N N 415 VAL HB H N N 416 VAL HG11 H N N 417 VAL HG12 H N N 418 VAL HG13 H N N 419 VAL HG21 H N N 420 VAL HG22 H N N 421 VAL HG23 H N N 422 VAL HXT H N N 423 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 NAG C1 C2 sing N N 237 NAG C1 O1 sing N N 238 NAG C1 O5 sing N N 239 NAG C1 H1 sing N N 240 NAG C2 C3 sing N N 241 NAG C2 N2 sing N N 242 NAG C2 H2 sing N N 243 NAG C3 C4 sing N N 244 NAG C3 O3 sing N N 245 NAG C3 H3 sing N N 246 NAG C4 C5 sing N N 247 NAG C4 O4 sing N N 248 NAG C4 H4 sing N N 249 NAG C5 C6 sing N N 250 NAG C5 O5 sing N N 251 NAG C5 H5 sing N N 252 NAG C6 O6 sing N N 253 NAG C6 H61 sing N N 254 NAG C6 H62 sing N N 255 NAG C7 C8 sing N N 256 NAG C7 N2 sing N N 257 NAG C7 O7 doub N N 258 NAG C8 H81 sing N N 259 NAG C8 H82 sing N N 260 NAG C8 H83 sing N N 261 NAG N2 HN2 sing N N 262 NAG O1 HO1 sing N N 263 NAG O3 HO3 sing N N 264 NAG O4 HO4 sing N N 265 NAG O6 HO6 sing N N 266 PHE N CA sing N N 267 PHE N H sing N N 268 PHE N H2 sing N N 269 PHE CA C sing N N 270 PHE CA CB sing N N 271 PHE CA HA sing N N 272 PHE C O doub N N 273 PHE C OXT sing N N 274 PHE CB CG sing N N 275 PHE CB HB2 sing N N 276 PHE CB HB3 sing N N 277 PHE CG CD1 doub Y N 278 PHE CG CD2 sing Y N 279 PHE CD1 CE1 sing Y N 280 PHE CD1 HD1 sing N N 281 PHE CD2 CE2 doub Y N 282 PHE CD2 HD2 sing N N 283 PHE CE1 CZ doub Y N 284 PHE CE1 HE1 sing N N 285 PHE CE2 CZ sing Y N 286 PHE CE2 HE2 sing N N 287 PHE CZ HZ sing N N 288 PHE OXT HXT sing N N 289 PRO N CA sing N N 290 PRO N CD sing N N 291 PRO N H sing N N 292 PRO CA C sing N N 293 PRO CA CB sing N N 294 PRO CA HA sing N N 295 PRO C O doub N N 296 PRO C OXT sing N N 297 PRO CB CG sing N N 298 PRO CB HB2 sing N N 299 PRO CB HB3 sing N N 300 PRO CG CD sing N N 301 PRO CG HG2 sing N N 302 PRO CG HG3 sing N N 303 PRO CD HD2 sing N N 304 PRO CD HD3 sing N N 305 PRO OXT HXT sing N N 306 SER N CA sing N N 307 SER N H sing N N 308 SER N H2 sing N N 309 SER CA C sing N N 310 SER CA CB sing N N 311 SER CA HA sing N N 312 SER C O doub N N 313 SER C OXT sing N N 314 SER CB OG sing N N 315 SER CB HB2 sing N N 316 SER CB HB3 sing N N 317 SER OG HG sing N N 318 SER OXT HXT sing N N 319 THR N CA sing N N 320 THR N H sing N N 321 THR N H2 sing N N 322 THR CA C sing N N 323 THR CA CB sing N N 324 THR CA HA sing N N 325 THR C O doub N N 326 THR C OXT sing N N 327 THR CB OG1 sing N N 328 THR CB CG2 sing N N 329 THR CB HB sing N N 330 THR OG1 HG1 sing N N 331 THR CG2 HG21 sing N N 332 THR CG2 HG22 sing N N 333 THR CG2 HG23 sing N N 334 THR OXT HXT sing N N 335 TRP N CA sing N N 336 TRP N H sing N N 337 TRP N H2 sing N N 338 TRP CA C sing N N 339 TRP CA CB sing N N 340 TRP CA HA sing N N 341 TRP C O doub N N 342 TRP C OXT sing N N 343 TRP CB CG sing N N 344 TRP CB HB2 sing N N 345 TRP CB HB3 sing N N 346 TRP CG CD1 doub Y N 347 TRP CG CD2 sing Y N 348 TRP CD1 NE1 sing Y N 349 TRP CD1 HD1 sing N N 350 TRP CD2 CE2 doub Y N 351 TRP CD2 CE3 sing Y N 352 TRP NE1 CE2 sing Y N 353 TRP NE1 HE1 sing N N 354 TRP CE2 CZ2 sing Y N 355 TRP CE3 CZ3 doub Y N 356 TRP CE3 HE3 sing N N 357 TRP CZ2 CH2 doub Y N 358 TRP CZ2 HZ2 sing N N 359 TRP CZ3 CH2 sing Y N 360 TRP CZ3 HZ3 sing N N 361 TRP CH2 HH2 sing N N 362 TRP OXT HXT sing N N 363 TYR N CA sing N N 364 TYR N H sing N N 365 TYR N H2 sing N N 366 TYR CA C sing N N 367 TYR CA CB sing N N 368 TYR CA HA sing N N 369 TYR C O doub N N 370 TYR C OXT sing N N 371 TYR CB CG sing N N 372 TYR CB HB2 sing N N 373 TYR CB HB3 sing N N 374 TYR CG CD1 doub Y N 375 TYR CG CD2 sing Y N 376 TYR CD1 CE1 sing Y N 377 TYR CD1 HD1 sing N N 378 TYR CD2 CE2 doub Y N 379 TYR CD2 HD2 sing N N 380 TYR CE1 CZ doub Y N 381 TYR CE1 HE1 sing N N 382 TYR CE2 CZ sing Y N 383 TYR CE2 HE2 sing N N 384 TYR CZ OH sing N N 385 TYR OH HH sing N N 386 TYR OXT HXT sing N N 387 VAL N CA sing N N 388 VAL N H sing N N 389 VAL N H2 sing N N 390 VAL CA C sing N N 391 VAL CA CB sing N N 392 VAL CA HA sing N N 393 VAL C O doub N N 394 VAL C OXT sing N N 395 VAL CB CG1 sing N N 396 VAL CB CG2 sing N N 397 VAL CB HB sing N N 398 VAL CG1 HG11 sing N N 399 VAL CG1 HG12 sing N N 400 VAL CG1 HG13 sing N N 401 VAL CG2 HG21 sing N N 402 VAL CG2 HG22 sing N N 403 VAL CG2 HG23 sing N N 404 VAL OXT HXT sing N N 405 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' GM103403 1 'Department of Energy (DOE, United States)' 'United States' DE-AC02-06CH11357 2 # _atom_sites.entry_id 4PLM _atom_sites.fract_transf_matrix[1][1] 0.015968 _atom_sites.fract_transf_matrix[1][2] 0.009219 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018438 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.003707 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA CL MG N O S # loop_