data_4PQ1 # _entry.id 4PQ1 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.321 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4PQ1 RCSB RCSB085079 WWPDB D_1000085079 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4PQ1 _pdbx_database_status.recvd_initial_deposition_date 2014-02-28 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Um, S.H.' 1 'Kim, J.S.' 2 'Yoon, B.Y.' 3 'Ha, N.C.' 4 # _citation.id primary _citation.title 'Structure of a DsbF homologue from Corynebacterium diphtheriae.' _citation.journal_abbrev 'Acta Crystallogr.,Sect.F' _citation.journal_volume 70 _citation.page_first 1167 _citation.page_last 1172 _citation.year 2014 _citation.journal_id_ASTM ACSFEN _citation.country US _citation.journal_id_ISSN 2053-230X _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 25195886 _citation.pdbx_database_id_DOI 10.1107/S2053230X14016355 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Um, S.H.' 1 ? primary 'Kim, J.S.' 2 ? primary 'Lee, K.' 3 ? primary 'Ha, N.C.' 4 ? # _cell.entry_id 4PQ1 _cell.length_a 78.103 _cell.length_b 36.162 _cell.length_c 62.522 _cell.angle_alpha 90.00 _cell.angle_beta 67.89 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4PQ1 _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Putative electron transport related protein' 17307.289 2 ? ? 'UNP residues 29-186' ? 2 water nat water 18.015 149 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name DsbF # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GTFQFHSPGGKTEIFYDEGERAPVSEIRGEGLTSDSVSLADYKDKIVVLNAWGQWCAPCRSESDDLQEVHEYLGDKGTVV GINVRDYSKNIAQDFVKDNGITYPSIYDPPFKTAAQLGGVPASVVPTTIVLDKQHRPAAVFLREVTAQDLIKVIDSLS ; _entity_poly.pdbx_seq_one_letter_code_can ;GTFQFHSPGGKTEIFYDEGERAPVSEIRGEGLTSDSVSLADYKDKIVVLNAWGQWCAPCRSESDDLQEVHEYLGDKGTVV GINVRDYSKNIAQDFVKDNGITYPSIYDPPFKTAAQLGGVPASVVPTTIVLDKQHRPAAVFLREVTAQDLIKVIDSLS ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 THR n 1 3 PHE n 1 4 GLN n 1 5 PHE n 1 6 HIS n 1 7 SER n 1 8 PRO n 1 9 GLY n 1 10 GLY n 1 11 LYS n 1 12 THR n 1 13 GLU n 1 14 ILE n 1 15 PHE n 1 16 TYR n 1 17 ASP n 1 18 GLU n 1 19 GLY n 1 20 GLU n 1 21 ARG n 1 22 ALA n 1 23 PRO n 1 24 VAL n 1 25 SER n 1 26 GLU n 1 27 ILE n 1 28 ARG n 1 29 GLY n 1 30 GLU n 1 31 GLY n 1 32 LEU n 1 33 THR n 1 34 SER n 1 35 ASP n 1 36 SER n 1 37 VAL n 1 38 SER n 1 39 LEU n 1 40 ALA n 1 41 ASP n 1 42 TYR n 1 43 LYS n 1 44 ASP n 1 45 LYS n 1 46 ILE n 1 47 VAL n 1 48 VAL n 1 49 LEU n 1 50 ASN n 1 51 ALA n 1 52 TRP n 1 53 GLY n 1 54 GLN n 1 55 TRP n 1 56 CYS n 1 57 ALA n 1 58 PRO n 1 59 CYS n 1 60 ARG n 1 61 SER n 1 62 GLU n 1 63 SER n 1 64 ASP n 1 65 ASP n 1 66 LEU n 1 67 GLN n 1 68 GLU n 1 69 VAL n 1 70 HIS n 1 71 GLU n 1 72 TYR n 1 73 LEU n 1 74 GLY n 1 75 ASP n 1 76 LYS n 1 77 GLY n 1 78 THR n 1 79 VAL n 1 80 VAL n 1 81 GLY n 1 82 ILE n 1 83 ASN n 1 84 VAL n 1 85 ARG n 1 86 ASP n 1 87 TYR n 1 88 SER n 1 89 LYS n 1 90 ASN n 1 91 ILE n 1 92 ALA n 1 93 GLN n 1 94 ASP n 1 95 PHE n 1 96 VAL n 1 97 LYS n 1 98 ASP n 1 99 ASN n 1 100 GLY n 1 101 ILE n 1 102 THR n 1 103 TYR n 1 104 PRO n 1 105 SER n 1 106 ILE n 1 107 TYR n 1 108 ASP n 1 109 PRO n 1 110 PRO n 1 111 PHE n 1 112 LYS n 1 113 THR n 1 114 ALA n 1 115 ALA n 1 116 GLN n 1 117 LEU n 1 118 GLY n 1 119 GLY n 1 120 VAL n 1 121 PRO n 1 122 ALA n 1 123 SER n 1 124 VAL n 1 125 VAL n 1 126 PRO n 1 127 THR n 1 128 THR n 1 129 ILE n 1 130 VAL n 1 131 LEU n 1 132 ASP n 1 133 LYS n 1 134 GLN n 1 135 HIS n 1 136 ARG n 1 137 PRO n 1 138 ALA n 1 139 ALA n 1 140 VAL n 1 141 PHE n 1 142 LEU n 1 143 ARG n 1 144 GLU n 1 145 VAL n 1 146 THR n 1 147 ALA n 1 148 GLN n 1 149 ASP n 1 150 LEU n 1 151 ILE n 1 152 LYS n 1 153 VAL n 1 154 ILE n 1 155 ASP n 1 156 SER n 1 157 LEU n 1 158 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene DIP0411 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'NCTC 13129' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Corynebacterium diphtheriae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 257309 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q6NJJ0_CORDI _struct_ref.pdbx_db_accession Q6NJJ0 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GTFQFHSPGGKTEIFYDEGERAPVSEIRGEGLTSDSVSLADYKDKIVVLNAWGQWCAPCRSESDDLQEVHEYLGDKGTVV GINVRDYSKNIAQDFVKDNGITYPSIYDPPFKTAAQLGGVPASVVPTTIVLDKQHRPAAVFLREVTAQDLIKVIDSLS ; _struct_ref.pdbx_align_begin 29 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4PQ1 A 1 ? 158 ? Q6NJJ0 29 ? 186 ? 29 186 2 1 4PQ1 B 1 ? 158 ? Q6NJJ0 29 ? 186 ? 29 186 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4PQ1 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.38 _exptl_crystal.density_percent_sol 48.21 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 287.15 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details '0.1M tris-HCl, 30% PEG 4K, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 287.15K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2012-12-16 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97951 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'PAL/PLS BEAMLINE 5C (4A)' _diffrn_source.pdbx_synchrotron_site PAL/PLS _diffrn_source.pdbx_synchrotron_beamline '5C (4A)' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97951 # _reflns.entry_id 4PQ1 _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 36.181 _reflns.d_resolution_high 2.097 _reflns.number_obs 18081 _reflns.number_all 19396 _reflns.percent_possible_obs 93.22 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate 25.650 _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_unique_obs _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_rejects _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.number_possible _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.meanI_over_sigI_all _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.09 2.20 86 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 1 1 2.20 2.34 88 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 2.34 2.52 0.91 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 3 1 2.52 2.78 93 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 4 1 2.78 3.18 96 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 5 1 3.18 4.00 99 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 6 1 # _refine.entry_id 4PQ1 _refine.ls_number_reflns_obs 17168 _refine.ls_number_reflns_all 19396 _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 1.52 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 36.181 _refine.ls_d_res_high 2.097 _refine.ls_percent_reflns_obs 93.22 _refine.ls_R_factor_obs 0.1868 _refine.ls_R_factor_R_work 0.1836 _refine.ls_R_factor_R_free 0.2496 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.05 _refine.ls_number_reflns_R_free 914 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 34.0400 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.2700 _refine.overall_FOM_work_R_set 0.8017 _refine.B_iso_max 85.530 _refine.B_iso_min 14.990 _refine.pdbx_overall_phase_error 26.6700 _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_R_factor_all ? _refine.ls_redundancy_reflns_obs ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2434 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 149 _refine_hist.number_atoms_total 2583 _refine_hist.d_res_high 2.097 _refine_hist.d_res_low 36.181 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' f_bond_d 2515 0.008 ? ? ? 'X-RAY DIFFRACTION' f_angle_d 3426 1.088 ? ? ? 'X-RAY DIFFRACTION' f_chiral_restr 383 0.042 ? ? ? 'X-RAY DIFFRACTION' f_plane_restr 452 0.006 ? ? ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 916 14.193 ? ? ? # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.pdbx_refine_id _refine_ls_shell.redundancy_reflns_obs 2.0967 2.2072 7 86.0000 2238 . 0.2827 0.3412 . 113 . 2351 . 'X-RAY DIFFRACTION' . 2.2072 2.3454 7 88.0000 2310 . 0.2662 0.3046 . 109 . 2419 . 'X-RAY DIFFRACTION' . 2.3454 2.5265 7 91.0000 2341 . 0.2301 0.3069 . 148 . 2489 . 'X-RAY DIFFRACTION' . 2.5265 2.7807 7 93.0000 2454 . 0.2176 0.2828 . 132 . 2586 . 'X-RAY DIFFRACTION' . 2.7807 3.1828 7 96.0000 2487 . 0.1852 0.2359 . 144 . 2631 . 'X-RAY DIFFRACTION' . 3.1828 4.0092 7 99.0000 2647 . 0.1599 0.2306 . 125 . 2772 . 'X-RAY DIFFRACTION' . 4.0092 36.1862 7 99.0000 2691 . 0.1385 0.2065 . 143 . 2834 . 'X-RAY DIFFRACTION' . # _struct.entry_id 4PQ1 _struct.title 'Crystal structure and functional implications of a DsbF homologue from Corynebacterium diphtheriae' _struct.pdbx_descriptor 'Putative electron transport related protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4PQ1 _struct_keywords.pdbx_keywords OXIDOREDUCTASE _struct_keywords.text 'Thioredoxin-like region, reductant, oxidant, Oxidoreductase' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 17 ? ARG A 21 ? ASP A 45 ARG A 49 5 ? 5 HELX_P HELX_P2 2 ALA A 40 ? LYS A 43 ? ALA A 68 LYS A 71 5 ? 4 HELX_P HELX_P3 3 CYS A 56 ? GLU A 62 ? CYS A 84 GLU A 90 1 ? 7 HELX_P HELX_P4 4 GLU A 62 ? GLY A 74 ? GLU A 90 GLY A 102 1 ? 13 HELX_P HELX_P5 5 SER A 88 ? ASN A 99 ? SER A 116 ASN A 127 1 ? 12 HELX_P HELX_P6 6 LYS A 112 ? LEU A 117 ? LYS A 140 LEU A 145 1 ? 6 HELX_P HELX_P7 7 THR A 146 ? LEU A 157 ? THR A 174 LEU A 185 1 ? 12 HELX_P HELX_P8 8 ASP B 17 ? ARG B 21 ? ASP B 45 ARG B 49 5 ? 5 HELX_P HELX_P9 9 ALA B 40 ? LYS B 43 ? ALA B 68 LYS B 71 5 ? 4 HELX_P HELX_P10 10 CYS B 56 ? GLY B 74 ? CYS B 84 GLY B 102 1 ? 19 HELX_P HELX_P11 11 SER B 88 ? ASN B 99 ? SER B 116 ASN B 127 1 ? 12 HELX_P HELX_P12 12 PHE B 111 ? ALA B 115 ? PHE B 139 ALA B 143 5 ? 5 HELX_P HELX_P13 13 THR B 146 ? SER B 156 ? THR B 174 SER B 184 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id disulf1 _struct_conn.conn_type_id disulf _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 56 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 59 _struct_conn.ptnr2_label_atom_id SG _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 84 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 87 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 2.111 _struct_conn.pdbx_value_order ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 VAL 125 A . ? VAL 153 A PRO 126 A ? PRO 154 A 1 3.80 2 VAL 125 B . ? VAL 153 B PRO 126 B ? PRO 154 B 1 -0.47 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 2 ? C ? 6 ? D ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? parallel A 5 6 ? parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? parallel C 5 6 ? parallel D 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 13 ? PHE A 15 ? GLU A 41 PHE A 43 A 2 PRO A 137 ? PHE A 141 ? PRO A 165 PHE A 169 A 3 THR A 127 ? LEU A 131 ? THR A 155 LEU A 159 A 4 ILE A 46 ? TRP A 52 ? ILE A 74 TRP A 80 A 5 GLY A 77 ? ASN A 83 ? GLY A 105 ASN A 111 A 6 SER A 105 ? TYR A 107 ? SER A 133 TYR A 135 B 1 ARG A 28 ? GLU A 30 ? ARG A 56 GLU A 58 B 2 SER A 36 ? SER A 38 ? SER A 64 SER A 66 C 1 GLU B 13 ? PHE B 15 ? GLU B 41 PHE B 43 C 2 PRO B 137 ? PHE B 141 ? PRO B 165 PHE B 169 C 3 THR B 127 ? LEU B 131 ? THR B 155 LEU B 159 C 4 ILE B 46 ? TRP B 52 ? ILE B 74 TRP B 80 C 5 GLY B 77 ? ASN B 83 ? GLY B 105 ASN B 111 C 6 SER B 105 ? TYR B 107 ? SER B 133 TYR B 135 D 1 ARG B 28 ? GLU B 30 ? ARG B 56 GLU B 58 D 2 SER B 36 ? SER B 38 ? SER B 64 SER B 66 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 14 ? N ILE A 42 O VAL A 140 ? O VAL A 168 A 2 3 O ALA A 138 ? O ALA A 166 N VAL A 130 ? N VAL A 158 A 3 4 O ILE A 129 ? O ILE A 157 N LEU A 49 ? N LEU A 77 A 4 5 N ASN A 50 ? N ASN A 78 O ILE A 82 ? O ILE A 110 A 5 6 N GLY A 81 ? N GLY A 109 O ILE A 106 ? O ILE A 134 B 1 2 N GLY A 29 ? N GLY A 57 O VAL A 37 ? O VAL A 65 C 1 2 N ILE B 14 ? N ILE B 42 O VAL B 140 ? O VAL B 168 C 2 3 O PHE B 141 ? O PHE B 169 N THR B 128 ? N THR B 156 C 3 4 O ILE B 129 ? O ILE B 157 N LEU B 49 ? N LEU B 77 C 4 5 N VAL B 48 ? N VAL B 76 O VAL B 80 ? O VAL B 108 C 5 6 N GLY B 81 ? N GLY B 109 O ILE B 106 ? O ILE B 134 D 1 2 N GLY B 29 ? N GLY B 57 O VAL B 37 ? O VAL B 65 # _database_PDB_matrix.entry_id 4PQ1 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4PQ1 _atom_sites.fract_transf_matrix[1][1] 0.012804 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] -0.005202 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.027653 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017264 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 29 29 GLY GLY A . n A 1 2 THR 2 30 30 THR THR A . n A 1 3 PHE 3 31 31 PHE PHE A . n A 1 4 GLN 4 32 32 GLN GLN A . n A 1 5 PHE 5 33 33 PHE PHE A . n A 1 6 HIS 6 34 34 HIS HIS A . n A 1 7 SER 7 35 35 SER SER A . n A 1 8 PRO 8 36 36 PRO PRO A . n A 1 9 GLY 9 37 37 GLY GLY A . n A 1 10 GLY 10 38 38 GLY GLY A . n A 1 11 LYS 11 39 39 LYS LYS A . n A 1 12 THR 12 40 40 THR THR A . n A 1 13 GLU 13 41 41 GLU GLU A . n A 1 14 ILE 14 42 42 ILE ILE A . n A 1 15 PHE 15 43 43 PHE PHE A . n A 1 16 TYR 16 44 44 TYR TYR A . n A 1 17 ASP 17 45 45 ASP ASP A . n A 1 18 GLU 18 46 46 GLU GLU A . n A 1 19 GLY 19 47 47 GLY GLY A . n A 1 20 GLU 20 48 48 GLU GLU A . n A 1 21 ARG 21 49 49 ARG ARG A . n A 1 22 ALA 22 50 50 ALA ALA A . n A 1 23 PRO 23 51 51 PRO PRO A . n A 1 24 VAL 24 52 52 VAL VAL A . n A 1 25 SER 25 53 53 SER SER A . n A 1 26 GLU 26 54 54 GLU GLU A . n A 1 27 ILE 27 55 55 ILE ILE A . n A 1 28 ARG 28 56 56 ARG ARG A . n A 1 29 GLY 29 57 57 GLY GLY A . n A 1 30 GLU 30 58 58 GLU GLU A . n A 1 31 GLY 31 59 59 GLY GLY A . n A 1 32 LEU 32 60 60 LEU LEU A . n A 1 33 THR 33 61 61 THR THR A . n A 1 34 SER 34 62 62 SER SER A . n A 1 35 ASP 35 63 63 ASP ASP A . n A 1 36 SER 36 64 64 SER SER A . n A 1 37 VAL 37 65 65 VAL VAL A . n A 1 38 SER 38 66 66 SER SER A . n A 1 39 LEU 39 67 67 LEU LEU A . n A 1 40 ALA 40 68 68 ALA ALA A . n A 1 41 ASP 41 69 69 ASP ASP A . n A 1 42 TYR 42 70 70 TYR TYR A . n A 1 43 LYS 43 71 71 LYS LYS A . n A 1 44 ASP 44 72 72 ASP ASP A . n A 1 45 LYS 45 73 73 LYS LYS A . n A 1 46 ILE 46 74 74 ILE ILE A . n A 1 47 VAL 47 75 75 VAL VAL A . n A 1 48 VAL 48 76 76 VAL VAL A . n A 1 49 LEU 49 77 77 LEU LEU A . n A 1 50 ASN 50 78 78 ASN ASN A . n A 1 51 ALA 51 79 79 ALA ALA A . n A 1 52 TRP 52 80 80 TRP TRP A . n A 1 53 GLY 53 81 81 GLY GLY A . n A 1 54 GLN 54 82 82 GLN GLN A . n A 1 55 TRP 55 83 83 TRP TRP A . n A 1 56 CYS 56 84 84 CYS CYS A . n A 1 57 ALA 57 85 85 ALA ALA A . n A 1 58 PRO 58 86 86 PRO PRO A . n A 1 59 CYS 59 87 87 CYS CYS A . n A 1 60 ARG 60 88 88 ARG ARG A . n A 1 61 SER 61 89 89 SER SER A . n A 1 62 GLU 62 90 90 GLU GLU A . n A 1 63 SER 63 91 91 SER SER A . n A 1 64 ASP 64 92 92 ASP ASP A . n A 1 65 ASP 65 93 93 ASP ASP A . n A 1 66 LEU 66 94 94 LEU LEU A . n A 1 67 GLN 67 95 95 GLN GLN A . n A 1 68 GLU 68 96 96 GLU GLU A . n A 1 69 VAL 69 97 97 VAL VAL A . n A 1 70 HIS 70 98 98 HIS HIS A . n A 1 71 GLU 71 99 99 GLU GLU A . n A 1 72 TYR 72 100 100 TYR TYR A . n A 1 73 LEU 73 101 101 LEU LEU A . n A 1 74 GLY 74 102 102 GLY GLY A . n A 1 75 ASP 75 103 103 ASP ASP A . n A 1 76 LYS 76 104 104 LYS LYS A . n A 1 77 GLY 77 105 105 GLY GLY A . n A 1 78 THR 78 106 106 THR THR A . n A 1 79 VAL 79 107 107 VAL VAL A . n A 1 80 VAL 80 108 108 VAL VAL A . n A 1 81 GLY 81 109 109 GLY GLY A . n A 1 82 ILE 82 110 110 ILE ILE A . n A 1 83 ASN 83 111 111 ASN ASN A . n A 1 84 VAL 84 112 112 VAL VAL A . n A 1 85 ARG 85 113 113 ARG ARG A . n A 1 86 ASP 86 114 114 ASP ASP A . n A 1 87 TYR 87 115 115 TYR TYR A . n A 1 88 SER 88 116 116 SER SER A . n A 1 89 LYS 89 117 117 LYS LYS A . n A 1 90 ASN 90 118 118 ASN ASN A . n A 1 91 ILE 91 119 119 ILE ILE A . n A 1 92 ALA 92 120 120 ALA ALA A . n A 1 93 GLN 93 121 121 GLN GLN A . n A 1 94 ASP 94 122 122 ASP ASP A . n A 1 95 PHE 95 123 123 PHE PHE A . n A 1 96 VAL 96 124 124 VAL VAL A . n A 1 97 LYS 97 125 125 LYS LYS A . n A 1 98 ASP 98 126 126 ASP ASP A . n A 1 99 ASN 99 127 127 ASN ASN A . n A 1 100 GLY 100 128 128 GLY GLY A . n A 1 101 ILE 101 129 129 ILE ILE A . n A 1 102 THR 102 130 130 THR THR A . n A 1 103 TYR 103 131 131 TYR TYR A . n A 1 104 PRO 104 132 132 PRO PRO A . n A 1 105 SER 105 133 133 SER SER A . n A 1 106 ILE 106 134 134 ILE ILE A . n A 1 107 TYR 107 135 135 TYR TYR A . n A 1 108 ASP 108 136 136 ASP ASP A . n A 1 109 PRO 109 137 137 PRO PRO A . n A 1 110 PRO 110 138 138 PRO PRO A . n A 1 111 PHE 111 139 139 PHE PHE A . n A 1 112 LYS 112 140 140 LYS LYS A . n A 1 113 THR 113 141 141 THR THR A . n A 1 114 ALA 114 142 142 ALA ALA A . n A 1 115 ALA 115 143 143 ALA ALA A . n A 1 116 GLN 116 144 144 GLN GLN A . n A 1 117 LEU 117 145 145 LEU LEU A . n A 1 118 GLY 118 146 146 GLY GLY A . n A 1 119 GLY 119 147 147 GLY GLY A . n A 1 120 VAL 120 148 148 VAL VAL A . n A 1 121 PRO 121 149 149 PRO PRO A . n A 1 122 ALA 122 150 150 ALA ALA A . n A 1 123 SER 123 151 151 SER SER A . n A 1 124 VAL 124 152 152 VAL VAL A . n A 1 125 VAL 125 153 153 VAL VAL A . n A 1 126 PRO 126 154 154 PRO PRO A . n A 1 127 THR 127 155 155 THR THR A . n A 1 128 THR 128 156 156 THR THR A . n A 1 129 ILE 129 157 157 ILE ILE A . n A 1 130 VAL 130 158 158 VAL VAL A . n A 1 131 LEU 131 159 159 LEU LEU A . n A 1 132 ASP 132 160 160 ASP ASP A . n A 1 133 LYS 133 161 161 LYS LYS A . n A 1 134 GLN 134 162 162 GLN GLN A . n A 1 135 HIS 135 163 163 HIS HIS A . n A 1 136 ARG 136 164 164 ARG ARG A . n A 1 137 PRO 137 165 165 PRO PRO A . n A 1 138 ALA 138 166 166 ALA ALA A . n A 1 139 ALA 139 167 167 ALA ALA A . n A 1 140 VAL 140 168 168 VAL VAL A . n A 1 141 PHE 141 169 169 PHE PHE A . n A 1 142 LEU 142 170 170 LEU LEU A . n A 1 143 ARG 143 171 171 ARG ARG A . n A 1 144 GLU 144 172 172 GLU GLU A . n A 1 145 VAL 145 173 173 VAL VAL A . n A 1 146 THR 146 174 174 THR THR A . n A 1 147 ALA 147 175 175 ALA ALA A . n A 1 148 GLN 148 176 176 GLN GLN A . n A 1 149 ASP 149 177 177 ASP ASP A . n A 1 150 LEU 150 178 178 LEU LEU A . n A 1 151 ILE 151 179 179 ILE ILE A . n A 1 152 LYS 152 180 180 LYS LYS A . n A 1 153 VAL 153 181 181 VAL VAL A . n A 1 154 ILE 154 182 182 ILE ILE A . n A 1 155 ASP 155 183 183 ASP ASP A . n A 1 156 SER 156 184 184 SER SER A . n A 1 157 LEU 157 185 185 LEU LEU A . n A 1 158 SER 158 186 ? ? ? A . n B 1 1 GLY 1 29 29 GLY GLY B . n B 1 2 THR 2 30 30 THR THR B . n B 1 3 PHE 3 31 31 PHE PHE B . n B 1 4 GLN 4 32 32 GLN GLN B . n B 1 5 PHE 5 33 33 PHE PHE B . n B 1 6 HIS 6 34 34 HIS HIS B . n B 1 7 SER 7 35 35 SER SER B . n B 1 8 PRO 8 36 36 PRO PRO B . n B 1 9 GLY 9 37 37 GLY GLY B . n B 1 10 GLY 10 38 38 GLY GLY B . n B 1 11 LYS 11 39 39 LYS LYS B . n B 1 12 THR 12 40 40 THR THR B . n B 1 13 GLU 13 41 41 GLU GLU B . n B 1 14 ILE 14 42 42 ILE ILE B . n B 1 15 PHE 15 43 43 PHE PHE B . n B 1 16 TYR 16 44 44 TYR TYR B . n B 1 17 ASP 17 45 45 ASP ASP B . n B 1 18 GLU 18 46 46 GLU GLU B . n B 1 19 GLY 19 47 47 GLY GLY B . n B 1 20 GLU 20 48 48 GLU GLU B . n B 1 21 ARG 21 49 49 ARG ARG B . n B 1 22 ALA 22 50 50 ALA ALA B . n B 1 23 PRO 23 51 51 PRO PRO B . n B 1 24 VAL 24 52 52 VAL VAL B . n B 1 25 SER 25 53 53 SER SER B . n B 1 26 GLU 26 54 54 GLU GLU B . n B 1 27 ILE 27 55 55 ILE ILE B . n B 1 28 ARG 28 56 56 ARG ARG B . n B 1 29 GLY 29 57 57 GLY GLY B . n B 1 30 GLU 30 58 58 GLU GLU B . n B 1 31 GLY 31 59 59 GLY GLY B . n B 1 32 LEU 32 60 60 LEU LEU B . n B 1 33 THR 33 61 61 THR THR B . n B 1 34 SER 34 62 62 SER SER B . n B 1 35 ASP 35 63 63 ASP ASP B . n B 1 36 SER 36 64 64 SER SER B . n B 1 37 VAL 37 65 65 VAL VAL B . n B 1 38 SER 38 66 66 SER SER B . n B 1 39 LEU 39 67 67 LEU LEU B . n B 1 40 ALA 40 68 68 ALA ALA B . n B 1 41 ASP 41 69 69 ASP ASP B . n B 1 42 TYR 42 70 70 TYR TYR B . n B 1 43 LYS 43 71 71 LYS LYS B . n B 1 44 ASP 44 72 72 ASP ASP B . n B 1 45 LYS 45 73 73 LYS LYS B . n B 1 46 ILE 46 74 74 ILE ILE B . n B 1 47 VAL 47 75 75 VAL VAL B . n B 1 48 VAL 48 76 76 VAL VAL B . n B 1 49 LEU 49 77 77 LEU LEU B . n B 1 50 ASN 50 78 78 ASN ASN B . n B 1 51 ALA 51 79 79 ALA ALA B . n B 1 52 TRP 52 80 80 TRP TRP B . n B 1 53 GLY 53 81 81 GLY GLY B . n B 1 54 GLN 54 82 82 GLN GLN B . n B 1 55 TRP 55 83 83 TRP TRP B . n B 1 56 CYS 56 84 84 CYS CYS B . n B 1 57 ALA 57 85 85 ALA ALA B . n B 1 58 PRO 58 86 86 PRO PRO B . n B 1 59 CYS 59 87 87 CYS CYS B . n B 1 60 ARG 60 88 88 ARG ARG B . n B 1 61 SER 61 89 89 SER SER B . n B 1 62 GLU 62 90 90 GLU GLU B . n B 1 63 SER 63 91 91 SER SER B . n B 1 64 ASP 64 92 92 ASP ASP B . n B 1 65 ASP 65 93 93 ASP ASP B . n B 1 66 LEU 66 94 94 LEU LEU B . n B 1 67 GLN 67 95 95 GLN GLN B . n B 1 68 GLU 68 96 96 GLU GLU B . n B 1 69 VAL 69 97 97 VAL VAL B . n B 1 70 HIS 70 98 98 HIS HIS B . n B 1 71 GLU 71 99 99 GLU GLU B . n B 1 72 TYR 72 100 100 TYR TYR B . n B 1 73 LEU 73 101 101 LEU LEU B . n B 1 74 GLY 74 102 102 GLY GLY B . n B 1 75 ASP 75 103 103 ASP ASP B . n B 1 76 LYS 76 104 104 LYS LYS B . n B 1 77 GLY 77 105 105 GLY GLY B . n B 1 78 THR 78 106 106 THR THR B . n B 1 79 VAL 79 107 107 VAL VAL B . n B 1 80 VAL 80 108 108 VAL VAL B . n B 1 81 GLY 81 109 109 GLY GLY B . n B 1 82 ILE 82 110 110 ILE ILE B . n B 1 83 ASN 83 111 111 ASN ASN B . n B 1 84 VAL 84 112 112 VAL VAL B . n B 1 85 ARG 85 113 113 ARG ARG B . n B 1 86 ASP 86 114 114 ASP ASP B . n B 1 87 TYR 87 115 115 TYR TYR B . n B 1 88 SER 88 116 116 SER SER B . n B 1 89 LYS 89 117 117 LYS LYS B . n B 1 90 ASN 90 118 118 ASN ASN B . n B 1 91 ILE 91 119 119 ILE ILE B . n B 1 92 ALA 92 120 120 ALA ALA B . n B 1 93 GLN 93 121 121 GLN GLN B . n B 1 94 ASP 94 122 122 ASP ASP B . n B 1 95 PHE 95 123 123 PHE PHE B . n B 1 96 VAL 96 124 124 VAL VAL B . n B 1 97 LYS 97 125 125 LYS LYS B . n B 1 98 ASP 98 126 126 ASP ASP B . n B 1 99 ASN 99 127 127 ASN ASN B . n B 1 100 GLY 100 128 128 GLY GLY B . n B 1 101 ILE 101 129 129 ILE ILE B . n B 1 102 THR 102 130 130 THR THR B . n B 1 103 TYR 103 131 131 TYR TYR B . n B 1 104 PRO 104 132 132 PRO PRO B . n B 1 105 SER 105 133 133 SER SER B . n B 1 106 ILE 106 134 134 ILE ILE B . n B 1 107 TYR 107 135 135 TYR TYR B . n B 1 108 ASP 108 136 136 ASP ASP B . n B 1 109 PRO 109 137 137 PRO PRO B . n B 1 110 PRO 110 138 138 PRO PRO B . n B 1 111 PHE 111 139 139 PHE PHE B . n B 1 112 LYS 112 140 140 LYS LYS B . n B 1 113 THR 113 141 141 THR THR B . n B 1 114 ALA 114 142 142 ALA ALA B . n B 1 115 ALA 115 143 143 ALA ALA B . n B 1 116 GLN 116 144 144 GLN GLN B . n B 1 117 LEU 117 145 145 LEU LEU B . n B 1 118 GLY 118 146 146 GLY GLY B . n B 1 119 GLY 119 147 147 GLY GLY B . n B 1 120 VAL 120 148 148 VAL VAL B . n B 1 121 PRO 121 149 149 PRO PRO B . n B 1 122 ALA 122 150 150 ALA ALA B . n B 1 123 SER 123 151 151 SER SER B . n B 1 124 VAL 124 152 152 VAL VAL B . n B 1 125 VAL 125 153 153 VAL VAL B . n B 1 126 PRO 126 154 154 PRO PRO B . n B 1 127 THR 127 155 155 THR THR B . n B 1 128 THR 128 156 156 THR THR B . n B 1 129 ILE 129 157 157 ILE ILE B . n B 1 130 VAL 130 158 158 VAL VAL B . n B 1 131 LEU 131 159 159 LEU LEU B . n B 1 132 ASP 132 160 160 ASP ASP B . n B 1 133 LYS 133 161 161 LYS LYS B . n B 1 134 GLN 134 162 162 GLN GLN B . n B 1 135 HIS 135 163 163 HIS HIS B . n B 1 136 ARG 136 164 164 ARG ARG B . n B 1 137 PRO 137 165 165 PRO PRO B . n B 1 138 ALA 138 166 166 ALA ALA B . n B 1 139 ALA 139 167 167 ALA ALA B . n B 1 140 VAL 140 168 168 VAL VAL B . n B 1 141 PHE 141 169 169 PHE PHE B . n B 1 142 LEU 142 170 170 LEU LEU B . n B 1 143 ARG 143 171 171 ARG ARG B . n B 1 144 GLU 144 172 172 GLU GLU B . n B 1 145 VAL 145 173 173 VAL VAL B . n B 1 146 THR 146 174 174 THR THR B . n B 1 147 ALA 147 175 175 ALA ALA B . n B 1 148 GLN 148 176 176 GLN GLN B . n B 1 149 ASP 149 177 177 ASP ASP B . n B 1 150 LEU 150 178 178 LEU LEU B . n B 1 151 ILE 151 179 179 ILE ILE B . n B 1 152 LYS 152 180 180 LYS LYS B . n B 1 153 VAL 153 181 181 VAL VAL B . n B 1 154 ILE 154 182 182 ILE ILE B . n B 1 155 ASP 155 183 183 ASP ASP B . n B 1 156 SER 156 184 184 SER SER B . n B 1 157 LEU 157 185 185 LEU LEU B . n B 1 158 SER 158 186 186 SER SER B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 201 1 HOH HOH A . C 2 HOH 2 202 5 HOH HOH A . C 2 HOH 3 203 6 HOH HOH A . C 2 HOH 4 204 7 HOH HOH A . C 2 HOH 5 205 8 HOH HOH A . C 2 HOH 6 206 10 HOH HOH A . C 2 HOH 7 207 11 HOH HOH A . C 2 HOH 8 208 13 HOH HOH A . C 2 HOH 9 209 15 HOH HOH A . C 2 HOH 10 210 18 HOH HOH A . C 2 HOH 11 211 20 HOH HOH A . C 2 HOH 12 212 27 HOH HOH A . C 2 HOH 13 213 28 HOH HOH A . C 2 HOH 14 214 29 HOH HOH A . C 2 HOH 15 215 31 HOH HOH A . C 2 HOH 16 216 33 HOH HOH A . C 2 HOH 17 217 34 HOH HOH A . C 2 HOH 18 218 37 HOH HOH A . C 2 HOH 19 219 40 HOH HOH A . C 2 HOH 20 220 41 HOH HOH A . C 2 HOH 21 221 45 HOH HOH A . C 2 HOH 22 222 46 HOH HOH A . C 2 HOH 23 223 48 HOH HOH A . C 2 HOH 24 224 50 HOH HOH A . C 2 HOH 25 225 53 HOH HOH A . C 2 HOH 26 226 54 HOH HOH A . C 2 HOH 27 227 55 HOH HOH A . C 2 HOH 28 228 56 HOH HOH A . C 2 HOH 29 229 57 HOH HOH A . C 2 HOH 30 230 58 HOH HOH A . C 2 HOH 31 231 62 HOH HOH A . C 2 HOH 32 232 64 HOH HOH A . C 2 HOH 33 233 65 HOH HOH A . C 2 HOH 34 234 66 HOH HOH A . C 2 HOH 35 235 69 HOH HOH A . C 2 HOH 36 236 70 HOH HOH A . C 2 HOH 37 237 71 HOH HOH A . C 2 HOH 38 238 75 HOH HOH A . C 2 HOH 39 239 77 HOH HOH A . C 2 HOH 40 240 78 HOH HOH A . C 2 HOH 41 241 83 HOH HOH A . C 2 HOH 42 242 85 HOH HOH A . C 2 HOH 43 243 86 HOH HOH A . C 2 HOH 44 244 87 HOH HOH A . C 2 HOH 45 245 91 HOH HOH A . C 2 HOH 46 246 94 HOH HOH A . C 2 HOH 47 247 95 HOH HOH A . C 2 HOH 48 248 96 HOH HOH A . C 2 HOH 49 249 104 HOH HOH A . C 2 HOH 50 250 105 HOH HOH A . C 2 HOH 51 251 106 HOH HOH A . C 2 HOH 52 252 107 HOH HOH A . C 2 HOH 53 253 110 HOH HOH A . C 2 HOH 54 254 115 HOH HOH A . C 2 HOH 55 255 119 HOH HOH A . C 2 HOH 56 256 121 HOH HOH A . C 2 HOH 57 257 122 HOH HOH A . C 2 HOH 58 258 128 HOH HOH A . C 2 HOH 59 259 129 HOH HOH A . C 2 HOH 60 260 130 HOH HOH A . C 2 HOH 61 261 142 HOH HOH A . C 2 HOH 62 262 149 HOH HOH A . C 2 HOH 63 263 152 HOH HOH A . C 2 HOH 64 264 167 HOH HOH A . C 2 HOH 65 265 168 HOH HOH A . C 2 HOH 66 266 169 HOH HOH A . C 2 HOH 67 267 170 HOH HOH A . C 2 HOH 68 268 171 HOH HOH A . C 2 HOH 69 269 172 HOH HOH A . C 2 HOH 70 270 173 HOH HOH A . C 2 HOH 71 271 180 HOH HOH A . C 2 HOH 72 272 181 HOH HOH A . C 2 HOH 73 273 182 HOH HOH A . C 2 HOH 74 274 183 HOH HOH A . C 2 HOH 75 275 184 HOH HOH A . C 2 HOH 76 276 185 HOH HOH A . C 2 HOH 77 277 186 HOH HOH A . C 2 HOH 78 278 193 HOH HOH A . C 2 HOH 79 279 194 HOH HOH A . C 2 HOH 80 280 209 HOH HOH A . C 2 HOH 81 281 210 HOH HOH A . C 2 HOH 82 282 211 HOH HOH A . C 2 HOH 83 283 213 HOH HOH A . C 2 HOH 84 284 218 HOH HOH A . C 2 HOH 85 285 219 HOH HOH A . C 2 HOH 86 286 220 HOH HOH A . C 2 HOH 87 287 221 HOH HOH A . C 2 HOH 88 288 222 HOH HOH A . C 2 HOH 89 289 223 HOH HOH A . C 2 HOH 90 290 224 HOH HOH A . C 2 HOH 91 291 225 HOH HOH A . D 2 HOH 1 201 2 HOH HOH B . D 2 HOH 2 202 4 HOH HOH B . D 2 HOH 3 203 9 HOH HOH B . D 2 HOH 4 204 12 HOH HOH B . D 2 HOH 5 205 14 HOH HOH B . D 2 HOH 6 206 16 HOH HOH B . D 2 HOH 7 207 17 HOH HOH B . D 2 HOH 8 208 21 HOH HOH B . D 2 HOH 9 209 22 HOH HOH B . D 2 HOH 10 210 23 HOH HOH B . D 2 HOH 11 211 24 HOH HOH B . D 2 HOH 12 212 35 HOH HOH B . D 2 HOH 13 213 36 HOH HOH B . D 2 HOH 14 214 38 HOH HOH B . D 2 HOH 15 215 39 HOH HOH B . D 2 HOH 16 216 43 HOH HOH B . D 2 HOH 17 217 47 HOH HOH B . D 2 HOH 18 218 49 HOH HOH B . D 2 HOH 19 219 76 HOH HOH B . D 2 HOH 20 220 97 HOH HOH B . D 2 HOH 21 221 100 HOH HOH B . D 2 HOH 22 222 101 HOH HOH B . D 2 HOH 23 223 103 HOH HOH B . D 2 HOH 24 224 109 HOH HOH B . D 2 HOH 25 225 112 HOH HOH B . D 2 HOH 26 226 113 HOH HOH B . D 2 HOH 27 227 114 HOH HOH B . D 2 HOH 28 228 117 HOH HOH B . D 2 HOH 29 229 137 HOH HOH B . D 2 HOH 30 230 138 HOH HOH B . D 2 HOH 31 231 144 HOH HOH B . D 2 HOH 32 232 148 HOH HOH B . D 2 HOH 33 233 150 HOH HOH B . D 2 HOH 34 234 151 HOH HOH B . D 2 HOH 35 235 157 HOH HOH B . D 2 HOH 36 236 161 HOH HOH B . D 2 HOH 37 237 165 HOH HOH B . D 2 HOH 38 238 166 HOH HOH B . D 2 HOH 39 239 174 HOH HOH B . D 2 HOH 40 240 177 HOH HOH B . D 2 HOH 41 241 178 HOH HOH B . D 2 HOH 42 242 179 HOH HOH B . D 2 HOH 43 243 192 HOH HOH B . D 2 HOH 44 244 199 HOH HOH B . D 2 HOH 45 245 200 HOH HOH B . D 2 HOH 46 246 205 HOH HOH B . D 2 HOH 47 247 206 HOH HOH B . D 2 HOH 48 248 207 HOH HOH B . D 2 HOH 49 249 215 HOH HOH B . D 2 HOH 50 250 216 HOH HOH B . D 2 HOH 51 251 217 HOH HOH B . D 2 HOH 52 252 226 HOH HOH B . D 2 HOH 53 253 227 HOH HOH B . D 2 HOH 54 254 228 HOH HOH B . D 2 HOH 55 255 229 HOH HOH B . D 2 HOH 56 256 230 HOH HOH B . D 2 HOH 57 257 231 HOH HOH B . D 2 HOH 58 258 232 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C 2 1 B,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-09-10 2 'Structure model' 1 1 2017-11-22 3 'Structure model' 1 2 2020-01-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Refinement description' 2 3 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' software 2 3 'Structure model' citation # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_software.name' 2 3 'Structure model' '_citation.journal_id_CSD' 3 3 'Structure model' '_citation.pdbx_database_id_PubMed' 4 3 'Structure model' '_citation.title' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 CCP4 'model building' . ? 2 PHENIX refinement '(phenix.refine: 1.8.2_1309)' ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 CCP4 phasing . ? 6 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OD1 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 ASP _pdbx_validate_close_contact.auth_seq_id_1 92 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 268 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.17 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 35 ? ? -35.79 121.19 2 1 SER A 53 ? ? -64.77 -178.06 3 1 LEU A 170 ? ? -97.38 50.93 4 1 ASP B 72 ? ? 57.21 15.26 5 1 LEU B 170 ? ? -96.97 45.23 # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id SER _pdbx_unobs_or_zero_occ_residues.auth_seq_id 186 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id SER _pdbx_unobs_or_zero_occ_residues.label_seq_id 158 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #