data_4PR7 # _entry.id 4PR7 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4PR7 pdb_00004pr7 10.2210/pdb4pr7/pdb RCSB RCSB085121 ? ? WWPDB D_1000085121 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 4FQE _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 4PR7 _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2014-03-05 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hutter, C.' 1 'Peneff, C.M.' 2 'Wirth, C.' 3 'Schirmer, T.' 4 # _citation.id primary _citation.title 'Structure of the oligogalacturonate-specific KdgM porin.' _citation.journal_abbrev 'Acta Crystallogr.,Sect.D' _citation.journal_volume 70 _citation.page_first 1770 _citation.page_last 1778 _citation.year 2014 _citation.journal_id_ASTM ABCRE6 _citation.country DK _citation.journal_id_ISSN 0907-4449 _citation.journal_id_CSD 0766 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24914987 _citation.pdbx_database_id_DOI 10.1107/S1399004714007147 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hutter, C.A.' 1 ? primary 'Lehner, R.' 2 ? primary 'Wirth, C.h.' 3 ? primary 'Condemine, G.' 4 ? primary 'Peneff, C.' 5 ? primary 'Schirmer, T.' 6 ? # _cell.length_a 36.8569 _cell.length_b 59.7311 _cell.length_c 51.5959 _cell.angle_alpha 90.0000 _cell.angle_beta 106.5412 _cell.angle_gamma 90.0000 _cell.entry_id 4PR7 _cell.pdbx_unique_axis ? _cell.Z_PDB 2 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.Int_Tables_number 4 _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.entry_id 4PR7 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Oligogalacturonate-specific porin KdgM' 25546.006 1 ? ? 'UNP residues 21-236' ? 2 branched man ;alpha-D-galactopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid ; 898.634 1 ? ? ? ? 3 non-polymer syn N-OCTANE 114.229 4 ? ? ? ? 4 non-polymer syn '(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE' 306.438 2 ? ? ? ? 5 water nat water 18.015 41 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;VSIDYRHEMQDTAQAGHKDRLLISHRFANGFGLSSEVKWAQSSADKTPNKPFNEQVSNGTEVVASYVYKFNSVFSIEPGF SLESGSSNNNYRPYLRGRANVTDDLSVALRYRPYFKRNSGNIGKDNTMDKGYTLTGNIDYTFLKDYTIGYELEYKKGTSG KTILSDNDDYDITHNVKLSYKWDKNWKPYVEVGNVSGSETTDERQTRYRVGVQYSFHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;VSIDYRHEMQDTAQAGHKDRLLISHRFANGFGLSSEVKWAQSSADKTPNKPFNEQVSNGTEVVASYVYKFNSVFSIEPGF SLESGSSNNNYRPYLRGRANVTDDLSVALRYRPYFKRNSGNIGKDNTMDKGYTLTGNIDYTFLKDYTIGYELEYKKGTSG KTILSDNDDYDITHNVKLSYKWDKNWKPYVEVGNVSGSETTDERQTRYRVGVQYSFHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 VAL n 1 2 SER n 1 3 ILE n 1 4 ASP n 1 5 TYR n 1 6 ARG n 1 7 HIS n 1 8 GLU n 1 9 MET n 1 10 GLN n 1 11 ASP n 1 12 THR n 1 13 ALA n 1 14 GLN n 1 15 ALA n 1 16 GLY n 1 17 HIS n 1 18 LYS n 1 19 ASP n 1 20 ARG n 1 21 LEU n 1 22 LEU n 1 23 ILE n 1 24 SER n 1 25 HIS n 1 26 ARG n 1 27 PHE n 1 28 ALA n 1 29 ASN n 1 30 GLY n 1 31 PHE n 1 32 GLY n 1 33 LEU n 1 34 SER n 1 35 SER n 1 36 GLU n 1 37 VAL n 1 38 LYS n 1 39 TRP n 1 40 ALA n 1 41 GLN n 1 42 SER n 1 43 SER n 1 44 ALA n 1 45 ASP n 1 46 LYS n 1 47 THR n 1 48 PRO n 1 49 ASN n 1 50 LYS n 1 51 PRO n 1 52 PHE n 1 53 ASN n 1 54 GLU n 1 55 GLN n 1 56 VAL n 1 57 SER n 1 58 ASN n 1 59 GLY n 1 60 THR n 1 61 GLU n 1 62 VAL n 1 63 VAL n 1 64 ALA n 1 65 SER n 1 66 TYR n 1 67 VAL n 1 68 TYR n 1 69 LYS n 1 70 PHE n 1 71 ASN n 1 72 SER n 1 73 VAL n 1 74 PHE n 1 75 SER n 1 76 ILE n 1 77 GLU n 1 78 PRO n 1 79 GLY n 1 80 PHE n 1 81 SER n 1 82 LEU n 1 83 GLU n 1 84 SER n 1 85 GLY n 1 86 SER n 1 87 SER n 1 88 ASN n 1 89 ASN n 1 90 ASN n 1 91 TYR n 1 92 ARG n 1 93 PRO n 1 94 TYR n 1 95 LEU n 1 96 ARG n 1 97 GLY n 1 98 ARG n 1 99 ALA n 1 100 ASN n 1 101 VAL n 1 102 THR n 1 103 ASP n 1 104 ASP n 1 105 LEU n 1 106 SER n 1 107 VAL n 1 108 ALA n 1 109 LEU n 1 110 ARG n 1 111 TYR n 1 112 ARG n 1 113 PRO n 1 114 TYR n 1 115 PHE n 1 116 LYS n 1 117 ARG n 1 118 ASN n 1 119 SER n 1 120 GLY n 1 121 ASN n 1 122 ILE n 1 123 GLY n 1 124 LYS n 1 125 ASP n 1 126 ASN n 1 127 THR n 1 128 MET n 1 129 ASP n 1 130 LYS n 1 131 GLY n 1 132 TYR n 1 133 THR n 1 134 LEU n 1 135 THR n 1 136 GLY n 1 137 ASN n 1 138 ILE n 1 139 ASP n 1 140 TYR n 1 141 THR n 1 142 PHE n 1 143 LEU n 1 144 LYS n 1 145 ASP n 1 146 TYR n 1 147 THR n 1 148 ILE n 1 149 GLY n 1 150 TYR n 1 151 GLU n 1 152 LEU n 1 153 GLU n 1 154 TYR n 1 155 LYS n 1 156 LYS n 1 157 GLY n 1 158 THR n 1 159 SER n 1 160 GLY n 1 161 LYS n 1 162 THR n 1 163 ILE n 1 164 LEU n 1 165 SER n 1 166 ASP n 1 167 ASN n 1 168 ASP n 1 169 ASP n 1 170 TYR n 1 171 ASP n 1 172 ILE n 1 173 THR n 1 174 HIS n 1 175 ASN n 1 176 VAL n 1 177 LYS n 1 178 LEU n 1 179 SER n 1 180 TYR n 1 181 LYS n 1 182 TRP n 1 183 ASP n 1 184 LYS n 1 185 ASN n 1 186 TRP n 1 187 LYS n 1 188 PRO n 1 189 TYR n 1 190 VAL n 1 191 GLU n 1 192 VAL n 1 193 GLY n 1 194 ASN n 1 195 VAL n 1 196 SER n 1 197 GLY n 1 198 SER n 1 199 GLU n 1 200 THR n 1 201 THR n 1 202 ASP n 1 203 GLU n 1 204 ARG n 1 205 GLN n 1 206 THR n 1 207 ARG n 1 208 TYR n 1 209 ARG n 1 210 VAL n 1 211 GLY n 1 212 VAL n 1 213 GLN n 1 214 TYR n 1 215 SER n 1 216 PHE n 1 217 HIS n 1 218 HIS n 1 219 HIS n 1 220 HIS n 1 221 HIS n 1 222 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'kdgM, Dda3937_03362' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 3937 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Dickeya dadantii' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 204038 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)omp8/pLys' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pKSM717 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code KDGM_DICD3 _struct_ref.pdbx_db_accession Q934G3 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;VSIDYRHEMQDTAQAGHKDRLLISHRFANGFGLSSEVKWAQSSADKTPNKPFNEQVSNGTEVVASYVYKFNSVFSIEPGF SLESGSSNNNYRPYLRGRANVTDDLSVALRYRPYFKRNSGNIGKDNTMDKGYTLTGNIDYTFLKDYTIGYELEYKKGTSG KTILSDNDDYDITHNVKLSYKWDKNWKPYVEVGNVSGSETTDERQTRYRVGVQYSF ; _struct_ref.pdbx_align_begin 21 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4PR7 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 216 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q934G3 _struct_ref_seq.db_align_beg 21 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 236 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 216 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4PR7 HIS A 217 ? UNP Q934G3 ? ? 'expression tag' 217 1 1 4PR7 HIS A 218 ? UNP Q934G3 ? ? 'expression tag' 218 2 1 4PR7 HIS A 219 ? UNP Q934G3 ? ? 'expression tag' 219 3 1 4PR7 HIS A 220 ? UNP Q934G3 ? ? 'expression tag' 220 4 1 4PR7 HIS A 221 ? UNP Q934G3 ? ? 'expression tag' 221 5 1 4PR7 HIS A 222 ? UNP Q934G3 ? ? 'expression tag' 222 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ADA 'D-saccharide, alpha linking' . 'alpha-D-galactopyranuronic acid' 'alpha-D-galacturonic acid; D-galacturonic acid; galacturonic acid; ALPHA D-GALACTURONIC ACID' 'C6 H10 O7' 194.139 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C8E non-polymer . '(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE' ? 'C16 H34 O5' 306.438 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 OCT non-polymer . N-OCTANE ? 'C8 H18' 114.229 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 4PR7 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_percent_sol 44.0 _exptl_crystal.density_Matthews 2.2 _exptl_crystal.density_meas ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.pdbx_details '0.1 M MES, 22% MPD, 36 mM digalacturonate, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date 2011-04-01 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.008 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SLS BEAMLINE X06DA' _diffrn_source.pdbx_wavelength_list 1.008 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SLS _diffrn_source.pdbx_synchrotron_beamline X06DA # _reflns.d_resolution_low 59.74 _reflns.d_resolution_high 2.10 _reflns.number_obs 11990 _reflns.pdbx_Rmerge_I_obs 0.078 _reflns.pdbx_netI_over_sigmaI 9.9198 _reflns.percent_possible_obs 94.90 _reflns.pdbx_redundancy 2.86 _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I -3.0 _reflns.entry_id 4PR7 _reflns.number_all 11990 _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_low _reflns_shell.d_res_high _reflns_shell.number_measured_all _reflns_shell.number_unique_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.percent_possible_all _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.number_measured_obs _reflns_shell.number_unique_obs _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.21 2.10 2961 1419 0.31 2.44 77.47 2.09 ? ? ? ? ? 1 1 2.35 2.21 3859 1602 0.26 2.79 93.20 2.41 ? ? ? ? ? 2 1 2.51 2.35 4390 1593 0.24 3.00 97.97 2.76 ? ? ? ? ? 3 1 2.71 2.51 4750 1518 0.21 3.28 98.68 3.13 ? ? ? ? ? 4 1 2.97 2.71 4343 1375 0.13 5.25 98.83 3.16 ? ? ? ? ? 5 1 3.32 2.97 3980 1260 0.08 7.92 99.15 3.16 ? ? ? ? ? 6 1 3.83 3.32 3492 1106 0.06 7.61 99.13 3.16 ? ? ? ? ? 7 1 4.70 3.83 3007 963 0.04 12.20 99.57 3.12 ? ? ? ? ? 8 1 6.64 4.70 2308 741 0.04 13.12 99.65 3.11 ? ? ? ? ? 9 1 59.74 6.64 1233 413 0.03 14.74 97.89 2.99 ? ? ? ? ? 10 1 # _refine.entry_id 4PR7 _refine.ls_d_res_high 2.100 _refine.ls_d_res_low 30.0 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 93.99 _refine.ls_number_reflns_obs 11896 _refine.ls_number_reflns_all 11896 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.ls_R_factor_all 0.2100 _refine.ls_R_factor_obs 0.2100 _refine.ls_R_factor_R_work 0.2081 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2455 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 4.8000 _refine.ls_number_reflns_R_free 576 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 33.262 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.3100 _refine.aniso_B[2][2] -1.1900 _refine.aniso_B[3][3] 0.7500 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -0.0100 _refine.aniso_B[2][3] -0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9430 _refine.correlation_coeff_Fo_to_Fc_free 0.9170 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R_Free 0.1970 _refine.overall_SU_ML 0.1410 _refine.overall_SU_B 10.5420 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 'PDB ENTRY 4FQE' _refine.pdbx_method_to_determine_struct 'DIFFERENCE FOURIER' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 89.990 _refine.B_iso_min 7.950 _refine.occupancy_max 1.000 _refine.occupancy_min 0.000 _refine.pdbx_ls_sigma_I 0 _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_phase_error ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1417 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 135 _refine_hist.number_atoms_solvent 41 _refine_hist.number_atoms_total 1593 _refine_hist.d_res_high 2.100 _refine_hist.d_res_low 30.0 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 1519 0.008 0.019 ? ? 'X-RAY DIFFRACTION' r_bond_other_d 1463 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 2015 1.223 1.960 ? ? 'X-RAY DIFFRACTION' r_angle_other_deg 3356 0.635 3.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 165 6.827 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 77 31.608 22.597 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 240 16.711 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 12 19.541 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 199 0.078 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 1629 0.005 0.020 ? ? 'X-RAY DIFFRACTION' r_gen_planes_other 385 0.001 0.020 ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 2.100 _refine_ls_shell.d_res_low 2.154 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 62.26 _refine_ls_shell.number_reflns_R_work 562 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2020 _refine_ls_shell.R_factor_R_free 0.2370 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 32 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 594 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4PR7 _struct.title 'KdgM porin in complex with disordered oligogalacturonate' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4PR7 _struct_keywords.text 'beta barrel, oligogalacturonate specificity, transport protein, OUTER MEMBRANE PROTEIN' _struct_keywords.pdbx_keywords 'OUTER MEMBRANE PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 4 ? H N N 4 ? I N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B ADA . O4 ? ? ? 1_555 B ADA . C1 ? ? B ADA 1 B ADA 2 1_555 ? ? ? ? ? ? ? 1.436 ? ? covale2 covale both ? B ADA . O4 ? ? ? 1_555 B ADA . C1 ? ? B ADA 2 B ADA 3 1_555 ? ? ? ? ? ? ? 1.438 ? ? covale3 covale both ? B ADA . O4 ? ? ? 1_555 B ADA . C1 ? ? B ADA 3 B ADA 4 1_555 ? ? ? ? ? ? ? 1.444 ? ? covale4 covale both ? B ADA . O4 ? ? ? 1_555 B ADA . C1 ? ? B ADA 4 B ADA 5 1_555 ? ? ? ? ? ? ? 1.439 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 14 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel B 7 8 ? anti-parallel B 8 9 ? anti-parallel B 9 10 ? anti-parallel B 10 11 ? anti-parallel B 11 12 ? anti-parallel B 12 13 ? anti-parallel B 13 14 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 68 ? LYS A 69 ? TYR A 68 LYS A 69 A 2 PHE A 74 ? GLY A 85 ? PHE A 74 GLY A 85 A 3 TYR A 94 ? ASN A 100 ? TYR A 94 ASN A 100 A 4 LEU A 105 ? ARG A 117 ? LEU A 105 ARG A 117 B 1 TYR A 68 ? LYS A 69 ? TYR A 68 LYS A 69 B 2 PHE A 74 ? GLY A 85 ? PHE A 74 GLY A 85 B 3 SER A 57 ? TYR A 66 ? SER A 57 TYR A 66 B 4 PHE A 31 ? GLN A 41 ? PHE A 31 GLN A 41 B 5 HIS A 17 ? ARG A 26 ? HIS A 17 ARG A 26 B 6 SER A 2 ? GLN A 10 ? SER A 2 GLN A 10 B 7 GLN A 205 ? SER A 215 ? GLN A 205 SER A 215 B 8 TRP A 186 ? SER A 196 ? TRP A 186 SER A 196 B 9 ASP A 171 ? TYR A 180 ? ASP A 171 TYR A 180 B 10 TYR A 146 ? GLY A 157 ? TYR A 146 GLY A 157 B 11 GLY A 131 ? PHE A 142 ? GLY A 131 PHE A 142 B 12 LEU A 105 ? ARG A 117 ? LEU A 105 ARG A 117 B 13 ASN A 89 ? TYR A 91 ? ASN A 89 TYR A 91 B 14 PHE A 74 ? GLY A 85 ? PHE A 74 GLY A 85 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TYR A 68 ? N TYR A 68 O ILE A 76 ? O ILE A 76 A 2 3 N GLY A 79 ? N GLY A 79 O TYR A 94 ? O TYR A 94 A 3 4 N ALA A 99 ? N ALA A 99 O VAL A 107 ? O VAL A 107 B 1 2 N TYR A 68 ? N TYR A 68 O ILE A 76 ? O ILE A 76 B 2 3 O SER A 84 ? O SER A 84 N THR A 60 ? N THR A 60 B 3 4 O GLU A 61 ? O GLU A 61 N GLU A 36 ? N GLU A 36 B 4 5 O TRP A 39 ? O TRP A 39 N ASP A 19 ? N ASP A 19 B 5 6 O LEU A 22 ? O LEU A 22 N ASP A 4 ? N ASP A 4 B 6 7 N MET A 9 ? N MET A 9 O TYR A 208 ? O TYR A 208 B 7 8 O ARG A 207 ? O ARG A 207 N GLY A 193 ? N GLY A 193 B 8 9 O VAL A 190 ? O VAL A 190 N LEU A 178 ? N LEU A 178 B 9 10 O ASN A 175 ? O ASN A 175 N GLU A 151 ? N GLU A 151 B 10 11 O LEU A 152 ? O LEU A 152 N GLY A 136 ? N GLY A 136 B 11 12 O THR A 133 ? O THR A 133 N ARG A 112 ? N ARG A 112 B 12 13 O ARG A 117 ? O ARG A 117 N ASN A 89 ? N ASN A 89 B 13 14 O ASN A 90 ? O ASN A 90 N GLU A 83 ? N GLU A 83 # _atom_sites.entry_id 4PR7 _atom_sites.fract_transf_matrix[1][1] 0.027132 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.008058 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016742 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.020218 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 VAL 1 1 1 VAL VAL A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 ILE 3 3 3 ILE ILE A . n A 1 4 ASP 4 4 4 ASP ASP A . n A 1 5 TYR 5 5 5 TYR TYR A . n A 1 6 ARG 6 6 6 ARG ARG A . n A 1 7 HIS 7 7 7 HIS HIS A . n A 1 8 GLU 8 8 8 GLU GLU A . n A 1 9 MET 9 9 9 MET MET A . n A 1 10 GLN 10 10 10 GLN GLN A . n A 1 11 ASP 11 11 11 ASP ASP A . n A 1 12 THR 12 12 ? ? ? A . n A 1 13 ALA 13 13 ? ? ? A . n A 1 14 GLN 14 14 ? ? ? A . n A 1 15 ALA 15 15 ? ? ? A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 HIS 17 17 17 HIS HIS A . n A 1 18 LYS 18 18 18 LYS LYS A . n A 1 19 ASP 19 19 19 ASP ASP A . n A 1 20 ARG 20 20 20 ARG ARG A . n A 1 21 LEU 21 21 21 LEU LEU A . n A 1 22 LEU 22 22 22 LEU LEU A . n A 1 23 ILE 23 23 23 ILE ILE A . n A 1 24 SER 24 24 24 SER SER A . n A 1 25 HIS 25 25 25 HIS HIS A . n A 1 26 ARG 26 26 26 ARG ARG A . n A 1 27 PHE 27 27 27 PHE PHE A . n A 1 28 ALA 28 28 28 ALA ALA A . n A 1 29 ASN 29 29 29 ASN ASN A . n A 1 30 GLY 30 30 30 GLY GLY A . n A 1 31 PHE 31 31 31 PHE PHE A . n A 1 32 GLY 32 32 32 GLY GLY A . n A 1 33 LEU 33 33 33 LEU LEU A . n A 1 34 SER 34 34 34 SER SER A . n A 1 35 SER 35 35 35 SER SER A . n A 1 36 GLU 36 36 36 GLU GLU A . n A 1 37 VAL 37 37 37 VAL VAL A . n A 1 38 LYS 38 38 38 LYS LYS A . n A 1 39 TRP 39 39 39 TRP TRP A . n A 1 40 ALA 40 40 40 ALA ALA A . n A 1 41 GLN 41 41 41 GLN GLN A . n A 1 42 SER 42 42 42 SER SER A . n A 1 43 SER 43 43 ? ? ? A . n A 1 44 ALA 44 44 ? ? ? A . n A 1 45 ASP 45 45 ? ? ? A . n A 1 46 LYS 46 46 ? ? ? A . n A 1 47 THR 47 47 ? ? ? A . n A 1 48 PRO 48 48 ? ? ? A . n A 1 49 ASN 49 49 ? ? ? A . n A 1 50 LYS 50 50 ? ? ? A . n A 1 51 PRO 51 51 ? ? ? A . n A 1 52 PHE 52 52 ? ? ? A . n A 1 53 ASN 53 53 ? ? ? A . n A 1 54 GLU 54 54 ? ? ? A . n A 1 55 GLN 55 55 ? ? ? A . n A 1 56 VAL 56 56 56 VAL VAL A . n A 1 57 SER 57 57 57 SER SER A . n A 1 58 ASN 58 58 58 ASN ASN A . n A 1 59 GLY 59 59 59 GLY GLY A . n A 1 60 THR 60 60 60 THR THR A . n A 1 61 GLU 61 61 61 GLU GLU A . n A 1 62 VAL 62 62 62 VAL VAL A . n A 1 63 VAL 63 63 63 VAL VAL A . n A 1 64 ALA 64 64 64 ALA ALA A . n A 1 65 SER 65 65 65 SER SER A . n A 1 66 TYR 66 66 66 TYR TYR A . n A 1 67 VAL 67 67 67 VAL VAL A . n A 1 68 TYR 68 68 68 TYR TYR A . n A 1 69 LYS 69 69 69 LYS LYS A . n A 1 70 PHE 70 70 70 PHE PHE A . n A 1 71 ASN 71 71 71 ASN ASN A . n A 1 72 SER 72 72 72 SER SER A . n A 1 73 VAL 73 73 73 VAL VAL A . n A 1 74 PHE 74 74 74 PHE PHE A . n A 1 75 SER 75 75 75 SER SER A . n A 1 76 ILE 76 76 76 ILE ILE A . n A 1 77 GLU 77 77 77 GLU GLU A . n A 1 78 PRO 78 78 78 PRO PRO A . n A 1 79 GLY 79 79 79 GLY GLY A . n A 1 80 PHE 80 80 80 PHE PHE A . n A 1 81 SER 81 81 81 SER SER A . n A 1 82 LEU 82 82 82 LEU LEU A . n A 1 83 GLU 83 83 83 GLU GLU A . n A 1 84 SER 84 84 84 SER SER A . n A 1 85 GLY 85 85 85 GLY GLY A . n A 1 86 SER 86 86 86 SER SER A . n A 1 87 SER 87 87 87 SER SER A . n A 1 88 ASN 88 88 88 ASN ASN A . n A 1 89 ASN 89 89 89 ASN ASN A . n A 1 90 ASN 90 90 90 ASN ASN A . n A 1 91 TYR 91 91 91 TYR TYR A . n A 1 92 ARG 92 92 92 ARG ARG A . n A 1 93 PRO 93 93 93 PRO PRO A . n A 1 94 TYR 94 94 94 TYR TYR A . n A 1 95 LEU 95 95 95 LEU LEU A . n A 1 96 ARG 96 96 96 ARG ARG A . n A 1 97 GLY 97 97 97 GLY GLY A . n A 1 98 ARG 98 98 98 ARG ARG A . n A 1 99 ALA 99 99 99 ALA ALA A . n A 1 100 ASN 100 100 100 ASN ASN A . n A 1 101 VAL 101 101 101 VAL VAL A . n A 1 102 THR 102 102 102 THR THR A . n A 1 103 ASP 103 103 103 ASP ASP A . n A 1 104 ASP 104 104 104 ASP ASP A . n A 1 105 LEU 105 105 105 LEU LEU A . n A 1 106 SER 106 106 106 SER SER A . n A 1 107 VAL 107 107 107 VAL VAL A . n A 1 108 ALA 108 108 108 ALA ALA A . n A 1 109 LEU 109 109 109 LEU LEU A . n A 1 110 ARG 110 110 110 ARG ARG A . n A 1 111 TYR 111 111 111 TYR TYR A . n A 1 112 ARG 112 112 112 ARG ARG A . n A 1 113 PRO 113 113 113 PRO PRO A . n A 1 114 TYR 114 114 114 TYR TYR A . n A 1 115 PHE 115 115 115 PHE PHE A . n A 1 116 LYS 116 116 116 LYS LYS A . n A 1 117 ARG 117 117 117 ARG ARG A . n A 1 118 ASN 118 118 ? ? ? A . n A 1 119 SER 119 119 ? ? ? A . n A 1 120 GLY 120 120 ? ? ? A . n A 1 121 ASN 121 121 ? ? ? A . n A 1 122 ILE 122 122 ? ? ? A . n A 1 123 GLY 123 123 ? ? ? A . n A 1 124 LYS 124 124 ? ? ? A . n A 1 125 ASP 125 125 ? ? ? A . n A 1 126 ASN 126 126 ? ? ? A . n A 1 127 THR 127 127 ? ? ? A . n A 1 128 MET 128 128 ? ? ? A . n A 1 129 ASP 129 129 ? ? ? A . n A 1 130 LYS 130 130 130 LYS LYS A . n A 1 131 GLY 131 131 131 GLY GLY A . n A 1 132 TYR 132 132 132 TYR TYR A . n A 1 133 THR 133 133 133 THR THR A . n A 1 134 LEU 134 134 134 LEU LEU A . n A 1 135 THR 135 135 135 THR THR A . n A 1 136 GLY 136 136 136 GLY GLY A . n A 1 137 ASN 137 137 137 ASN ASN A . n A 1 138 ILE 138 138 138 ILE ILE A . n A 1 139 ASP 139 139 139 ASP ASP A . n A 1 140 TYR 140 140 140 TYR TYR A . n A 1 141 THR 141 141 141 THR THR A . n A 1 142 PHE 142 142 142 PHE PHE A . n A 1 143 LEU 143 143 143 LEU LEU A . n A 1 144 LYS 144 144 144 LYS LYS A . n A 1 145 ASP 145 145 145 ASP ASP A . n A 1 146 TYR 146 146 146 TYR TYR A . n A 1 147 THR 147 147 147 THR THR A . n A 1 148 ILE 148 148 148 ILE ILE A . n A 1 149 GLY 149 149 149 GLY GLY A . n A 1 150 TYR 150 150 150 TYR TYR A . n A 1 151 GLU 151 151 151 GLU GLU A . n A 1 152 LEU 152 152 152 LEU LEU A . n A 1 153 GLU 153 153 153 GLU GLU A . n A 1 154 TYR 154 154 154 TYR TYR A . n A 1 155 LYS 155 155 155 LYS LYS A . n A 1 156 LYS 156 156 156 LYS LYS A . n A 1 157 GLY 157 157 157 GLY GLY A . n A 1 158 THR 158 158 158 THR THR A . n A 1 159 SER 159 159 159 SER SER A . n A 1 160 GLY 160 160 ? ? ? A . n A 1 161 LYS 161 161 ? ? ? A . n A 1 162 THR 162 162 ? ? ? A . n A 1 163 ILE 163 163 ? ? ? A . n A 1 164 LEU 164 164 ? ? ? A . n A 1 165 SER 165 165 ? ? ? A . n A 1 166 ASP 166 166 ? ? ? A . n A 1 167 ASN 167 167 ? ? ? A . n A 1 168 ASP 168 168 ? ? ? A . n A 1 169 ASP 169 169 ? ? ? A . n A 1 170 TYR 170 170 170 TYR TYR A . n A 1 171 ASP 171 171 171 ASP ASP A . n A 1 172 ILE 172 172 172 ILE ILE A . n A 1 173 THR 173 173 173 THR THR A . n A 1 174 HIS 174 174 174 HIS HIS A . n A 1 175 ASN 175 175 175 ASN ASN A . n A 1 176 VAL 176 176 176 VAL VAL A . n A 1 177 LYS 177 177 177 LYS LYS A . n A 1 178 LEU 178 178 178 LEU LEU A . n A 1 179 SER 179 179 179 SER SER A . n A 1 180 TYR 180 180 180 TYR TYR A . n A 1 181 LYS 181 181 181 LYS LYS A . n A 1 182 TRP 182 182 182 TRP TRP A . n A 1 183 ASP 183 183 183 ASP ASP A . n A 1 184 LYS 184 184 184 LYS LYS A . n A 1 185 ASN 185 185 185 ASN ASN A . n A 1 186 TRP 186 186 186 TRP TRP A . n A 1 187 LYS 187 187 187 LYS LYS A . n A 1 188 PRO 188 188 188 PRO PRO A . n A 1 189 TYR 189 189 189 TYR TYR A . n A 1 190 VAL 190 190 190 VAL VAL A . n A 1 191 GLU 191 191 191 GLU GLU A . n A 1 192 VAL 192 192 192 VAL VAL A . n A 1 193 GLY 193 193 193 GLY GLY A . n A 1 194 ASN 194 194 194 ASN ASN A . n A 1 195 VAL 195 195 195 VAL VAL A . n A 1 196 SER 196 196 196 SER SER A . n A 1 197 GLY 197 197 ? ? ? A . n A 1 198 SER 198 198 ? ? ? A . n A 1 199 GLU 199 199 ? ? ? A . n A 1 200 THR 200 200 ? ? ? A . n A 1 201 THR 201 201 ? ? ? A . n A 1 202 ASP 202 202 ? ? ? A . n A 1 203 GLU 203 203 ? ? ? A . n A 1 204 ARG 204 204 204 ARG ARG A . n A 1 205 GLN 205 205 205 GLN GLN A . n A 1 206 THR 206 206 206 THR THR A . n A 1 207 ARG 207 207 207 ARG ARG A . n A 1 208 TYR 208 208 208 TYR TYR A . n A 1 209 ARG 209 209 209 ARG ARG A . n A 1 210 VAL 210 210 210 VAL VAL A . n A 1 211 GLY 211 211 211 GLY GLY A . n A 1 212 VAL 212 212 212 VAL VAL A . n A 1 213 GLN 213 213 213 GLN GLN A . n A 1 214 TYR 214 214 214 TYR TYR A . n A 1 215 SER 215 215 215 SER SER A . n A 1 216 PHE 216 216 216 PHE PHE A . n A 1 217 HIS 217 217 217 HIS HIS A . n A 1 218 HIS 218 218 ? ? ? A . n A 1 219 HIS 219 219 ? ? ? A . n A 1 220 HIS 220 220 ? ? ? A . n A 1 221 HIS 221 221 ? ? ? A . n A 1 222 HIS 222 222 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 OCT 1 301 1 OCT OCT A . D 3 OCT 1 302 2 OCT OCT A . E 3 OCT 1 303 6 OCT OCT A . F 3 OCT 1 304 7 OCT OCT A . G 4 C8E 1 305 1 C8E C8E A . H 4 C8E 1 306 2 C8E C8E A . I 5 HOH 1 401 1 HOH HOH A . I 5 HOH 2 402 2 HOH HOH A . I 5 HOH 3 403 3 HOH HOH A . I 5 HOH 4 404 4 HOH HOH A . I 5 HOH 5 405 5 HOH HOH A . I 5 HOH 6 406 6 HOH HOH A . I 5 HOH 7 407 7 HOH HOH A . I 5 HOH 8 408 8 HOH HOH A . I 5 HOH 9 409 9 HOH HOH A . I 5 HOH 10 410 10 HOH HOH A . I 5 HOH 11 411 11 HOH HOH A . I 5 HOH 12 412 12 HOH HOH A . I 5 HOH 13 413 13 HOH HOH A . I 5 HOH 14 414 15 HOH HOH A . I 5 HOH 15 415 16 HOH HOH A . I 5 HOH 16 416 17 HOH HOH A . I 5 HOH 17 417 18 HOH HOH A . I 5 HOH 18 418 20 HOH HOH A . I 5 HOH 19 419 22 HOH HOH A . I 5 HOH 20 420 23 HOH HOH A . I 5 HOH 21 421 25 HOH HOH A . I 5 HOH 22 422 26 HOH HOH A . I 5 HOH 23 423 28 HOH HOH A . I 5 HOH 24 424 29 HOH HOH A . I 5 HOH 25 425 30 HOH HOH A . I 5 HOH 26 426 33 HOH HOH A . I 5 HOH 27 427 34 HOH HOH A . I 5 HOH 28 428 35 HOH HOH A . I 5 HOH 29 429 37 HOH HOH A . I 5 HOH 30 430 38 HOH HOH A . I 5 HOH 31 431 39 HOH HOH A . I 5 HOH 32 432 41 HOH HOH A . I 5 HOH 33 433 42 HOH HOH A . I 5 HOH 34 434 43 HOH HOH A . I 5 HOH 35 435 44 HOH HOH A . I 5 HOH 36 436 46 HOH HOH A . I 5 HOH 37 437 47 HOH HOH A . I 5 HOH 38 438 48 HOH HOH A . I 5 HOH 39 439 49 HOH HOH A . I 5 HOH 40 440 50 HOH HOH A . I 5 HOH 41 441 51 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-06-11 2 'Structure model' 1 1 2014-09-24 3 'Structure model' 2 0 2020-07-29 4 'Structure model' 2 1 2023-09-20 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Atomic model' 4 3 'Structure model' 'Data collection' 5 3 'Structure model' 'Database references' 6 3 'Structure model' 'Derived calculations' 7 3 'Structure model' 'Structure summary' 8 4 'Structure model' Advisory 9 4 'Structure model' 'Data collection' 10 4 'Structure model' 'Database references' 11 4 'Structure model' 'Refinement description' 12 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' atom_site 2 3 'Structure model' chem_comp 3 3 'Structure model' database_PDB_caveat 4 3 'Structure model' entity 5 3 'Structure model' pdbx_branch_scheme 6 3 'Structure model' pdbx_chem_comp_identifier 7 3 'Structure model' pdbx_entity_branch 8 3 'Structure model' pdbx_entity_branch_descriptor 9 3 'Structure model' pdbx_entity_branch_link 10 3 'Structure model' pdbx_entity_branch_list 11 3 'Structure model' pdbx_entity_nonpoly 12 3 'Structure model' pdbx_nonpoly_scheme 13 3 'Structure model' pdbx_struct_assembly_gen 14 3 'Structure model' pdbx_unobs_or_zero_occ_residues 15 3 'Structure model' pdbx_validate_close_contact 16 3 'Structure model' struct_asym 17 3 'Structure model' struct_conn 18 3 'Structure model' struct_ref_seq_dif 19 3 'Structure model' struct_site 20 3 'Structure model' struct_site_gen 21 4 'Structure model' chem_comp 22 4 'Structure model' chem_comp_atom 23 4 'Structure model' chem_comp_bond 24 4 'Structure model' database_2 25 4 'Structure model' pdbx_initial_refinement_model 26 4 'Structure model' pdbx_unobs_or_zero_occ_residues # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_atom_site.B_iso_or_equiv' 2 3 'Structure model' '_atom_site.Cartn_x' 3 3 'Structure model' '_atom_site.Cartn_y' 4 3 'Structure model' '_atom_site.Cartn_z' 5 3 'Structure model' '_atom_site.auth_asym_id' 6 3 'Structure model' '_atom_site.auth_atom_id' 7 3 'Structure model' '_atom_site.auth_comp_id' 8 3 'Structure model' '_atom_site.auth_seq_id' 9 3 'Structure model' '_atom_site.label_asym_id' 10 3 'Structure model' '_atom_site.label_atom_id' 11 3 'Structure model' '_atom_site.label_comp_id' 12 3 'Structure model' '_atom_site.label_entity_id' 13 3 'Structure model' '_atom_site.occupancy' 14 3 'Structure model' '_atom_site.type_symbol' 15 3 'Structure model' '_chem_comp.name' 16 3 'Structure model' '_chem_comp.type' 17 3 'Structure model' '_entity.formula_weight' 18 3 'Structure model' '_entity.pdbx_description' 19 3 'Structure model' '_entity.pdbx_number_of_molecules' 20 3 'Structure model' '_entity.src_method' 21 3 'Structure model' '_entity.type' 22 3 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 23 3 'Structure model' '_pdbx_validate_close_contact.auth_asym_id_1' 24 3 'Structure model' '_pdbx_validate_close_contact.auth_seq_id_1' 25 3 'Structure model' '_struct_conn.pdbx_dist_value' 26 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 27 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 28 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 29 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 30 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 31 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 32 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 33 3 'Structure model' '_struct_ref_seq_dif.details' 34 4 'Structure model' '_chem_comp.pdbx_synonyms' 35 4 'Structure model' '_database_2.pdbx_DOI' 36 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 8.5390 _pdbx_refine_tls.origin_y 1.1350 _pdbx_refine_tls.origin_z 2.2370 _pdbx_refine_tls.T[1][1] 0.0320 _pdbx_refine_tls.T[2][2] 0.0246 _pdbx_refine_tls.T[3][3] 0.0652 _pdbx_refine_tls.T[1][2] 0.0056 _pdbx_refine_tls.T[1][3] -0.0146 _pdbx_refine_tls.T[2][3] 0.0057 _pdbx_refine_tls.L[1][1] 1.5074 _pdbx_refine_tls.L[2][2] 2.6115 _pdbx_refine_tls.L[3][3] 0.0460 _pdbx_refine_tls.L[1][2] 0.1857 _pdbx_refine_tls.L[1][3] 0.2489 _pdbx_refine_tls.L[2][3] 0.1413 _pdbx_refine_tls.S[1][1] -0.0189 _pdbx_refine_tls.S[2][2] 0.0087 _pdbx_refine_tls.S[3][3] 0.0102 _pdbx_refine_tls.S[1][2] -0.1019 _pdbx_refine_tls.S[1][3] 0.0291 _pdbx_refine_tls.S[2][3] 0.0265 _pdbx_refine_tls.S[2][1] 0.1214 _pdbx_refine_tls.S[3][1] 0.0003 _pdbx_refine_tls.S[3][2] -0.0166 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 1 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 217 _pdbx_refine_tls_group.selection_details ? _pdbx_refine_tls_group.beg_label_asym_id . _pdbx_refine_tls_group.beg_label_seq_id . _pdbx_refine_tls_group.end_label_asym_id . _pdbx_refine_tls_group.end_label_seq_id . _pdbx_refine_tls_group.selection ? # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 REFMAC 5.7.0029 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 2 SCALA CCP4_3.3.20 2011/05/18 other 'Phil R. Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' http://www.ccp4.ac.uk/dist/html/scala.html Fortran_77 ? 3 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 4 MOSFLM . ? ? ? ? 'data reduction' ? ? ? 5 PHASER . ? ? ? ? phasing ? ? ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O6A _pdbx_validate_close_contact.auth_asym_id_1 B _pdbx_validate_close_contact.auth_comp_id_1 ADA _pdbx_validate_close_contact.auth_seq_id_1 3 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 441 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.06 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 71 ? ? -173.80 -168.92 2 1 LYS A 144 ? ? 71.13 -56.26 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A THR 12 ? A THR 12 2 1 Y 1 A ALA 13 ? A ALA 13 3 1 Y 1 A GLN 14 ? A GLN 14 4 1 Y 1 A ALA 15 ? A ALA 15 5 1 Y 1 A SER 43 ? A SER 43 6 1 Y 1 A ALA 44 ? A ALA 44 7 1 Y 1 A ASP 45 ? A ASP 45 8 1 Y 1 A LYS 46 ? A LYS 46 9 1 Y 1 A THR 47 ? A THR 47 10 1 Y 1 A PRO 48 ? A PRO 48 11 1 Y 1 A ASN 49 ? A ASN 49 12 1 Y 1 A LYS 50 ? A LYS 50 13 1 Y 1 A PRO 51 ? A PRO 51 14 1 Y 1 A PHE 52 ? A PHE 52 15 1 Y 1 A ASN 53 ? A ASN 53 16 1 Y 1 A GLU 54 ? A GLU 54 17 1 Y 1 A GLN 55 ? A GLN 55 18 1 Y 1 A ASN 118 ? A ASN 118 19 1 Y 1 A SER 119 ? A SER 119 20 1 Y 1 A GLY 120 ? A GLY 120 21 1 Y 1 A ASN 121 ? A ASN 121 22 1 Y 1 A ILE 122 ? A ILE 122 23 1 Y 1 A GLY 123 ? A GLY 123 24 1 Y 1 A LYS 124 ? A LYS 124 25 1 Y 1 A ASP 125 ? A ASP 125 26 1 Y 1 A ASN 126 ? A ASN 126 27 1 Y 1 A THR 127 ? A THR 127 28 1 Y 1 A MET 128 ? A MET 128 29 1 Y 1 A ASP 129 ? A ASP 129 30 1 Y 1 A GLY 160 ? A GLY 160 31 1 Y 1 A LYS 161 ? A LYS 161 32 1 Y 1 A THR 162 ? A THR 162 33 1 Y 1 A ILE 163 ? A ILE 163 34 1 Y 1 A LEU 164 ? A LEU 164 35 1 Y 1 A SER 165 ? A SER 165 36 1 Y 1 A ASP 166 ? A ASP 166 37 1 Y 1 A ASN 167 ? A ASN 167 38 1 Y 1 A ASP 168 ? A ASP 168 39 1 Y 1 A ASP 169 ? A ASP 169 40 1 Y 1 A GLY 197 ? A GLY 197 41 1 Y 1 A SER 198 ? A SER 198 42 1 Y 1 A GLU 199 ? A GLU 199 43 1 Y 1 A THR 200 ? A THR 200 44 1 Y 1 A THR 201 ? A THR 201 45 1 Y 1 A ASP 202 ? A ASP 202 46 1 Y 1 A GLU 203 ? A GLU 203 47 1 Y 1 A HIS 218 ? A HIS 218 48 1 Y 1 A HIS 219 ? A HIS 219 49 1 Y 1 A HIS 220 ? A HIS 220 50 1 Y 1 A HIS 221 ? A HIS 221 51 1 Y 1 A HIS 222 ? A HIS 222 52 1 N 0 B ADA 1 ? B ADA ? 53 1 N 0 B ADA 2 ? B ADA ? 54 1 N 0 B ADA 3 ? B ADA ? 55 1 N 0 B ADA 4 ? B ADA ? 56 1 N 0 B ADA 5 ? B ADA ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ADA C1 C N S 1 ADA C2 C N R 2 ADA C3 C N S 3 ADA C4 C N R 4 ADA C5 C N S 5 ADA C6 C N N 6 ADA O1 O N N 7 ADA O2 O N N 8 ADA O3 O N N 9 ADA O4 O N N 10 ADA O5 O N N 11 ADA O6B O N N 12 ADA O6A O N N 13 ADA H1 H N N 14 ADA H2 H N N 15 ADA H3 H N N 16 ADA H4 H N N 17 ADA H5 H N N 18 ADA HO1 H N N 19 ADA HO2 H N N 20 ADA HO3 H N N 21 ADA HO4 H N N 22 ADA HO6B H N N 23 ALA N N N N 24 ALA CA C N S 25 ALA C C N N 26 ALA O O N N 27 ALA CB C N N 28 ALA OXT O N N 29 ALA H H N N 30 ALA H2 H N N 31 ALA HA H N N 32 ALA HB1 H N N 33 ALA HB2 H N N 34 ALA HB3 H N N 35 ALA HXT H N N 36 ARG N N N N 37 ARG CA C N S 38 ARG C C N N 39 ARG O O N N 40 ARG CB C N N 41 ARG CG C N N 42 ARG CD C N N 43 ARG NE N N N 44 ARG CZ C N N 45 ARG NH1 N N N 46 ARG NH2 N N N 47 ARG OXT O N N 48 ARG H H N N 49 ARG H2 H N N 50 ARG HA H N N 51 ARG HB2 H N N 52 ARG HB3 H N N 53 ARG HG2 H N N 54 ARG HG3 H N N 55 ARG HD2 H N N 56 ARG HD3 H N N 57 ARG HE H N N 58 ARG HH11 H N N 59 ARG HH12 H N N 60 ARG HH21 H N N 61 ARG HH22 H N N 62 ARG HXT H N N 63 ASN N N N N 64 ASN CA C N S 65 ASN C C N N 66 ASN O O N N 67 ASN CB C N N 68 ASN CG C N N 69 ASN OD1 O N N 70 ASN ND2 N N N 71 ASN OXT O N N 72 ASN H H N N 73 ASN H2 H N N 74 ASN HA H N N 75 ASN HB2 H N N 76 ASN HB3 H N N 77 ASN HD21 H N N 78 ASN HD22 H N N 79 ASN HXT H N N 80 ASP N N N N 81 ASP CA C N S 82 ASP C C N N 83 ASP O O N N 84 ASP CB C N N 85 ASP CG C N N 86 ASP OD1 O N N 87 ASP OD2 O N N 88 ASP OXT O N N 89 ASP H H N N 90 ASP H2 H N N 91 ASP HA H N N 92 ASP HB2 H N N 93 ASP HB3 H N N 94 ASP HD2 H N N 95 ASP HXT H N N 96 C8E C1 C N N 97 C8E C2 C N N 98 C8E C3 C N N 99 C8E C4 C N N 100 C8E C5 C N N 101 C8E C6 C N N 102 C8E C7 C N N 103 C8E C8 C N N 104 C8E O9 O N N 105 C8E C10 C N N 106 C8E C11 C N N 107 C8E O12 O N N 108 C8E C13 C N N 109 C8E C14 C N N 110 C8E O15 O N N 111 C8E C16 C N N 112 C8E C17 C N N 113 C8E O18 O N N 114 C8E C19 C N N 115 C8E C20 C N N 116 C8E O21 O N N 117 C8E H11 H N N 118 C8E H12 H N N 119 C8E H13 H N N 120 C8E H21 H N N 121 C8E H22 H N N 122 C8E H31 H N N 123 C8E H32 H N N 124 C8E H41 H N N 125 C8E H42 H N N 126 C8E H51 H N N 127 C8E H52 H N N 128 C8E H61 H N N 129 C8E H62 H N N 130 C8E H71 H N N 131 C8E H72 H N N 132 C8E H81 H N N 133 C8E H82 H N N 134 C8E H101 H N N 135 C8E H102 H N N 136 C8E H111 H N N 137 C8E H112 H N N 138 C8E H131 H N N 139 C8E H132 H N N 140 C8E H141 H N N 141 C8E H142 H N N 142 C8E H161 H N N 143 C8E H162 H N N 144 C8E H171 H N N 145 C8E H172 H N N 146 C8E H191 H N N 147 C8E H192 H N N 148 C8E H201 H N N 149 C8E H202 H N N 150 C8E HO2 H N N 151 GLN N N N N 152 GLN CA C N S 153 GLN C C N N 154 GLN O O N N 155 GLN CB C N N 156 GLN CG C N N 157 GLN CD C N N 158 GLN OE1 O N N 159 GLN NE2 N N N 160 GLN OXT O N N 161 GLN H H N N 162 GLN H2 H N N 163 GLN HA H N N 164 GLN HB2 H N N 165 GLN HB3 H N N 166 GLN HG2 H N N 167 GLN HG3 H N N 168 GLN HE21 H N N 169 GLN HE22 H N N 170 GLN HXT H N N 171 GLU N N N N 172 GLU CA C N S 173 GLU C C N N 174 GLU O O N N 175 GLU CB C N N 176 GLU CG C N N 177 GLU CD C N N 178 GLU OE1 O N N 179 GLU OE2 O N N 180 GLU OXT O N N 181 GLU H H N N 182 GLU H2 H N N 183 GLU HA H N N 184 GLU HB2 H N N 185 GLU HB3 H N N 186 GLU HG2 H N N 187 GLU HG3 H N N 188 GLU HE2 H N N 189 GLU HXT H N N 190 GLY N N N N 191 GLY CA C N N 192 GLY C C N N 193 GLY O O N N 194 GLY OXT O N N 195 GLY H H N N 196 GLY H2 H N N 197 GLY HA2 H N N 198 GLY HA3 H N N 199 GLY HXT H N N 200 HIS N N N N 201 HIS CA C N S 202 HIS C C N N 203 HIS O O N N 204 HIS CB C N N 205 HIS CG C Y N 206 HIS ND1 N Y N 207 HIS CD2 C Y N 208 HIS CE1 C Y N 209 HIS NE2 N Y N 210 HIS OXT O N N 211 HIS H H N N 212 HIS H2 H N N 213 HIS HA H N N 214 HIS HB2 H N N 215 HIS HB3 H N N 216 HIS HD1 H N N 217 HIS HD2 H N N 218 HIS HE1 H N N 219 HIS HE2 H N N 220 HIS HXT H N N 221 HOH O O N N 222 HOH H1 H N N 223 HOH H2 H N N 224 ILE N N N N 225 ILE CA C N S 226 ILE C C N N 227 ILE O O N N 228 ILE CB C N S 229 ILE CG1 C N N 230 ILE CG2 C N N 231 ILE CD1 C N N 232 ILE OXT O N N 233 ILE H H N N 234 ILE H2 H N N 235 ILE HA H N N 236 ILE HB H N N 237 ILE HG12 H N N 238 ILE HG13 H N N 239 ILE HG21 H N N 240 ILE HG22 H N N 241 ILE HG23 H N N 242 ILE HD11 H N N 243 ILE HD12 H N N 244 ILE HD13 H N N 245 ILE HXT H N N 246 LEU N N N N 247 LEU CA C N S 248 LEU C C N N 249 LEU O O N N 250 LEU CB C N N 251 LEU CG C N N 252 LEU CD1 C N N 253 LEU CD2 C N N 254 LEU OXT O N N 255 LEU H H N N 256 LEU H2 H N N 257 LEU HA H N N 258 LEU HB2 H N N 259 LEU HB3 H N N 260 LEU HG H N N 261 LEU HD11 H N N 262 LEU HD12 H N N 263 LEU HD13 H N N 264 LEU HD21 H N N 265 LEU HD22 H N N 266 LEU HD23 H N N 267 LEU HXT H N N 268 LYS N N N N 269 LYS CA C N S 270 LYS C C N N 271 LYS O O N N 272 LYS CB C N N 273 LYS CG C N N 274 LYS CD C N N 275 LYS CE C N N 276 LYS NZ N N N 277 LYS OXT O N N 278 LYS H H N N 279 LYS H2 H N N 280 LYS HA H N N 281 LYS HB2 H N N 282 LYS HB3 H N N 283 LYS HG2 H N N 284 LYS HG3 H N N 285 LYS HD2 H N N 286 LYS HD3 H N N 287 LYS HE2 H N N 288 LYS HE3 H N N 289 LYS HZ1 H N N 290 LYS HZ2 H N N 291 LYS HZ3 H N N 292 LYS HXT H N N 293 MET N N N N 294 MET CA C N S 295 MET C C N N 296 MET O O N N 297 MET CB C N N 298 MET CG C N N 299 MET SD S N N 300 MET CE C N N 301 MET OXT O N N 302 MET H H N N 303 MET H2 H N N 304 MET HA H N N 305 MET HB2 H N N 306 MET HB3 H N N 307 MET HG2 H N N 308 MET HG3 H N N 309 MET HE1 H N N 310 MET HE2 H N N 311 MET HE3 H N N 312 MET HXT H N N 313 OCT C1 C N N 314 OCT C2 C N N 315 OCT C3 C N N 316 OCT C4 C N N 317 OCT C5 C N N 318 OCT C6 C N N 319 OCT C7 C N N 320 OCT C8 C N N 321 OCT H11 H N N 322 OCT H12 H N N 323 OCT H13 H N N 324 OCT H21 H N N 325 OCT H22 H N N 326 OCT H31 H N N 327 OCT H32 H N N 328 OCT H41 H N N 329 OCT H42 H N N 330 OCT H51 H N N 331 OCT H52 H N N 332 OCT H61 H N N 333 OCT H62 H N N 334 OCT H71 H N N 335 OCT H72 H N N 336 OCT H81 H N N 337 OCT H82 H N N 338 OCT H83 H N N 339 PHE N N N N 340 PHE CA C N S 341 PHE C C N N 342 PHE O O N N 343 PHE CB C N N 344 PHE CG C Y N 345 PHE CD1 C Y N 346 PHE CD2 C Y N 347 PHE CE1 C Y N 348 PHE CE2 C Y N 349 PHE CZ C Y N 350 PHE OXT O N N 351 PHE H H N N 352 PHE H2 H N N 353 PHE HA H N N 354 PHE HB2 H N N 355 PHE HB3 H N N 356 PHE HD1 H N N 357 PHE HD2 H N N 358 PHE HE1 H N N 359 PHE HE2 H N N 360 PHE HZ H N N 361 PHE HXT H N N 362 PRO N N N N 363 PRO CA C N S 364 PRO C C N N 365 PRO O O N N 366 PRO CB C N N 367 PRO CG C N N 368 PRO CD C N N 369 PRO OXT O N N 370 PRO H H N N 371 PRO HA H N N 372 PRO HB2 H N N 373 PRO HB3 H N N 374 PRO HG2 H N N 375 PRO HG3 H N N 376 PRO HD2 H N N 377 PRO HD3 H N N 378 PRO HXT H N N 379 SER N N N N 380 SER CA C N S 381 SER C C N N 382 SER O O N N 383 SER CB C N N 384 SER OG O N N 385 SER OXT O N N 386 SER H H N N 387 SER H2 H N N 388 SER HA H N N 389 SER HB2 H N N 390 SER HB3 H N N 391 SER HG H N N 392 SER HXT H N N 393 THR N N N N 394 THR CA C N S 395 THR C C N N 396 THR O O N N 397 THR CB C N R 398 THR OG1 O N N 399 THR CG2 C N N 400 THR OXT O N N 401 THR H H N N 402 THR H2 H N N 403 THR HA H N N 404 THR HB H N N 405 THR HG1 H N N 406 THR HG21 H N N 407 THR HG22 H N N 408 THR HG23 H N N 409 THR HXT H N N 410 TRP N N N N 411 TRP CA C N S 412 TRP C C N N 413 TRP O O N N 414 TRP CB C N N 415 TRP CG C Y N 416 TRP CD1 C Y N 417 TRP CD2 C Y N 418 TRP NE1 N Y N 419 TRP CE2 C Y N 420 TRP CE3 C Y N 421 TRP CZ2 C Y N 422 TRP CZ3 C Y N 423 TRP CH2 C Y N 424 TRP OXT O N N 425 TRP H H N N 426 TRP H2 H N N 427 TRP HA H N N 428 TRP HB2 H N N 429 TRP HB3 H N N 430 TRP HD1 H N N 431 TRP HE1 H N N 432 TRP HE3 H N N 433 TRP HZ2 H N N 434 TRP HZ3 H N N 435 TRP HH2 H N N 436 TRP HXT H N N 437 TYR N N N N 438 TYR CA C N S 439 TYR C C N N 440 TYR O O N N 441 TYR CB C N N 442 TYR CG C Y N 443 TYR CD1 C Y N 444 TYR CD2 C Y N 445 TYR CE1 C Y N 446 TYR CE2 C Y N 447 TYR CZ C Y N 448 TYR OH O N N 449 TYR OXT O N N 450 TYR H H N N 451 TYR H2 H N N 452 TYR HA H N N 453 TYR HB2 H N N 454 TYR HB3 H N N 455 TYR HD1 H N N 456 TYR HD2 H N N 457 TYR HE1 H N N 458 TYR HE2 H N N 459 TYR HH H N N 460 TYR HXT H N N 461 VAL N N N N 462 VAL CA C N S 463 VAL C C N N 464 VAL O O N N 465 VAL CB C N N 466 VAL CG1 C N N 467 VAL CG2 C N N 468 VAL OXT O N N 469 VAL H H N N 470 VAL H2 H N N 471 VAL HA H N N 472 VAL HB H N N 473 VAL HG11 H N N 474 VAL HG12 H N N 475 VAL HG13 H N N 476 VAL HG21 H N N 477 VAL HG22 H N N 478 VAL HG23 H N N 479 VAL HXT H N N 480 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ADA C1 C2 sing N N 1 ADA C1 O1 sing N N 2 ADA C1 O5 sing N N 3 ADA C1 H1 sing N N 4 ADA C2 C3 sing N N 5 ADA C2 O2 sing N N 6 ADA C2 H2 sing N N 7 ADA C3 C4 sing N N 8 ADA C3 O3 sing N N 9 ADA C3 H3 sing N N 10 ADA C4 C5 sing N N 11 ADA C4 O4 sing N N 12 ADA C4 H4 sing N N 13 ADA C5 C6 sing N N 14 ADA C5 O5 sing N N 15 ADA C5 H5 sing N N 16 ADA C6 O6B sing N N 17 ADA C6 O6A doub N N 18 ADA O1 HO1 sing N N 19 ADA O2 HO2 sing N N 20 ADA O3 HO3 sing N N 21 ADA O4 HO4 sing N N 22 ADA O6B HO6B sing N N 23 ALA N CA sing N N 24 ALA N H sing N N 25 ALA N H2 sing N N 26 ALA CA C sing N N 27 ALA CA CB sing N N 28 ALA CA HA sing N N 29 ALA C O doub N N 30 ALA C OXT sing N N 31 ALA CB HB1 sing N N 32 ALA CB HB2 sing N N 33 ALA CB HB3 sing N N 34 ALA OXT HXT sing N N 35 ARG N CA sing N N 36 ARG N H sing N N 37 ARG N H2 sing N N 38 ARG CA C sing N N 39 ARG CA CB sing N N 40 ARG CA HA sing N N 41 ARG C O doub N N 42 ARG C OXT sing N N 43 ARG CB CG sing N N 44 ARG CB HB2 sing N N 45 ARG CB HB3 sing N N 46 ARG CG CD sing N N 47 ARG CG HG2 sing N N 48 ARG CG HG3 sing N N 49 ARG CD NE sing N N 50 ARG CD HD2 sing N N 51 ARG CD HD3 sing N N 52 ARG NE CZ sing N N 53 ARG NE HE sing N N 54 ARG CZ NH1 sing N N 55 ARG CZ NH2 doub N N 56 ARG NH1 HH11 sing N N 57 ARG NH1 HH12 sing N N 58 ARG NH2 HH21 sing N N 59 ARG NH2 HH22 sing N N 60 ARG OXT HXT sing N N 61 ASN N CA sing N N 62 ASN N H sing N N 63 ASN N H2 sing N N 64 ASN CA C sing N N 65 ASN CA CB sing N N 66 ASN CA HA sing N N 67 ASN C O doub N N 68 ASN C OXT sing N N 69 ASN CB CG sing N N 70 ASN CB HB2 sing N N 71 ASN CB HB3 sing N N 72 ASN CG OD1 doub N N 73 ASN CG ND2 sing N N 74 ASN ND2 HD21 sing N N 75 ASN ND2 HD22 sing N N 76 ASN OXT HXT sing N N 77 ASP N CA sing N N 78 ASP N H sing N N 79 ASP N H2 sing N N 80 ASP CA C sing N N 81 ASP CA CB sing N N 82 ASP CA HA sing N N 83 ASP C O doub N N 84 ASP C OXT sing N N 85 ASP CB CG sing N N 86 ASP CB HB2 sing N N 87 ASP CB HB3 sing N N 88 ASP CG OD1 doub N N 89 ASP CG OD2 sing N N 90 ASP OD2 HD2 sing N N 91 ASP OXT HXT sing N N 92 C8E C1 C2 sing N N 93 C8E C1 H11 sing N N 94 C8E C1 H12 sing N N 95 C8E C1 H13 sing N N 96 C8E C2 C3 sing N N 97 C8E C2 H21 sing N N 98 C8E C2 H22 sing N N 99 C8E C3 C4 sing N N 100 C8E C3 H31 sing N N 101 C8E C3 H32 sing N N 102 C8E C4 C5 sing N N 103 C8E C4 H41 sing N N 104 C8E C4 H42 sing N N 105 C8E C5 C6 sing N N 106 C8E C5 H51 sing N N 107 C8E C5 H52 sing N N 108 C8E C6 C7 sing N N 109 C8E C6 H61 sing N N 110 C8E C6 H62 sing N N 111 C8E C7 C8 sing N N 112 C8E C7 H71 sing N N 113 C8E C7 H72 sing N N 114 C8E C8 O9 sing N N 115 C8E C8 H81 sing N N 116 C8E C8 H82 sing N N 117 C8E O9 C10 sing N N 118 C8E C10 C11 sing N N 119 C8E C10 H101 sing N N 120 C8E C10 H102 sing N N 121 C8E C11 O12 sing N N 122 C8E C11 H111 sing N N 123 C8E C11 H112 sing N N 124 C8E O12 C13 sing N N 125 C8E C13 C14 sing N N 126 C8E C13 H131 sing N N 127 C8E C13 H132 sing N N 128 C8E C14 O15 sing N N 129 C8E C14 H141 sing N N 130 C8E C14 H142 sing N N 131 C8E O15 C16 sing N N 132 C8E C16 C17 sing N N 133 C8E C16 H161 sing N N 134 C8E C16 H162 sing N N 135 C8E C17 O18 sing N N 136 C8E C17 H171 sing N N 137 C8E C17 H172 sing N N 138 C8E O18 C19 sing N N 139 C8E C19 C20 sing N N 140 C8E C19 H191 sing N N 141 C8E C19 H192 sing N N 142 C8E C20 O21 sing N N 143 C8E C20 H201 sing N N 144 C8E C20 H202 sing N N 145 C8E O21 HO2 sing N N 146 GLN N CA sing N N 147 GLN N H sing N N 148 GLN N H2 sing N N 149 GLN CA C sing N N 150 GLN CA CB sing N N 151 GLN CA HA sing N N 152 GLN C O doub N N 153 GLN C OXT sing N N 154 GLN CB CG sing N N 155 GLN CB HB2 sing N N 156 GLN CB HB3 sing N N 157 GLN CG CD sing N N 158 GLN CG HG2 sing N N 159 GLN CG HG3 sing N N 160 GLN CD OE1 doub N N 161 GLN CD NE2 sing N N 162 GLN NE2 HE21 sing N N 163 GLN NE2 HE22 sing N N 164 GLN OXT HXT sing N N 165 GLU N CA sing N N 166 GLU N H sing N N 167 GLU N H2 sing N N 168 GLU CA C sing N N 169 GLU CA CB sing N N 170 GLU CA HA sing N N 171 GLU C O doub N N 172 GLU C OXT sing N N 173 GLU CB CG sing N N 174 GLU CB HB2 sing N N 175 GLU CB HB3 sing N N 176 GLU CG CD sing N N 177 GLU CG HG2 sing N N 178 GLU CG HG3 sing N N 179 GLU CD OE1 doub N N 180 GLU CD OE2 sing N N 181 GLU OE2 HE2 sing N N 182 GLU OXT HXT sing N N 183 GLY N CA sing N N 184 GLY N H sing N N 185 GLY N H2 sing N N 186 GLY CA C sing N N 187 GLY CA HA2 sing N N 188 GLY CA HA3 sing N N 189 GLY C O doub N N 190 GLY C OXT sing N N 191 GLY OXT HXT sing N N 192 HIS N CA sing N N 193 HIS N H sing N N 194 HIS N H2 sing N N 195 HIS CA C sing N N 196 HIS CA CB sing N N 197 HIS CA HA sing N N 198 HIS C O doub N N 199 HIS C OXT sing N N 200 HIS CB CG sing N N 201 HIS CB HB2 sing N N 202 HIS CB HB3 sing N N 203 HIS CG ND1 sing Y N 204 HIS CG CD2 doub Y N 205 HIS ND1 CE1 doub Y N 206 HIS ND1 HD1 sing N N 207 HIS CD2 NE2 sing Y N 208 HIS CD2 HD2 sing N N 209 HIS CE1 NE2 sing Y N 210 HIS CE1 HE1 sing N N 211 HIS NE2 HE2 sing N N 212 HIS OXT HXT sing N N 213 HOH O H1 sing N N 214 HOH O H2 sing N N 215 ILE N CA sing N N 216 ILE N H sing N N 217 ILE N H2 sing N N 218 ILE CA C sing N N 219 ILE CA CB sing N N 220 ILE CA HA sing N N 221 ILE C O doub N N 222 ILE C OXT sing N N 223 ILE CB CG1 sing N N 224 ILE CB CG2 sing N N 225 ILE CB HB sing N N 226 ILE CG1 CD1 sing N N 227 ILE CG1 HG12 sing N N 228 ILE CG1 HG13 sing N N 229 ILE CG2 HG21 sing N N 230 ILE CG2 HG22 sing N N 231 ILE CG2 HG23 sing N N 232 ILE CD1 HD11 sing N N 233 ILE CD1 HD12 sing N N 234 ILE CD1 HD13 sing N N 235 ILE OXT HXT sing N N 236 LEU N CA sing N N 237 LEU N H sing N N 238 LEU N H2 sing N N 239 LEU CA C sing N N 240 LEU CA CB sing N N 241 LEU CA HA sing N N 242 LEU C O doub N N 243 LEU C OXT sing N N 244 LEU CB CG sing N N 245 LEU CB HB2 sing N N 246 LEU CB HB3 sing N N 247 LEU CG CD1 sing N N 248 LEU CG CD2 sing N N 249 LEU CG HG sing N N 250 LEU CD1 HD11 sing N N 251 LEU CD1 HD12 sing N N 252 LEU CD1 HD13 sing N N 253 LEU CD2 HD21 sing N N 254 LEU CD2 HD22 sing N N 255 LEU CD2 HD23 sing N N 256 LEU OXT HXT sing N N 257 LYS N CA sing N N 258 LYS N H sing N N 259 LYS N H2 sing N N 260 LYS CA C sing N N 261 LYS CA CB sing N N 262 LYS CA HA sing N N 263 LYS C O doub N N 264 LYS C OXT sing N N 265 LYS CB CG sing N N 266 LYS CB HB2 sing N N 267 LYS CB HB3 sing N N 268 LYS CG CD sing N N 269 LYS CG HG2 sing N N 270 LYS CG HG3 sing N N 271 LYS CD CE sing N N 272 LYS CD HD2 sing N N 273 LYS CD HD3 sing N N 274 LYS CE NZ sing N N 275 LYS CE HE2 sing N N 276 LYS CE HE3 sing N N 277 LYS NZ HZ1 sing N N 278 LYS NZ HZ2 sing N N 279 LYS NZ HZ3 sing N N 280 LYS OXT HXT sing N N 281 MET N CA sing N N 282 MET N H sing N N 283 MET N H2 sing N N 284 MET CA C sing N N 285 MET CA CB sing N N 286 MET CA HA sing N N 287 MET C O doub N N 288 MET C OXT sing N N 289 MET CB CG sing N N 290 MET CB HB2 sing N N 291 MET CB HB3 sing N N 292 MET CG SD sing N N 293 MET CG HG2 sing N N 294 MET CG HG3 sing N N 295 MET SD CE sing N N 296 MET CE HE1 sing N N 297 MET CE HE2 sing N N 298 MET CE HE3 sing N N 299 MET OXT HXT sing N N 300 OCT C1 C2 sing N N 301 OCT C1 H11 sing N N 302 OCT C1 H12 sing N N 303 OCT C1 H13 sing N N 304 OCT C2 C3 sing N N 305 OCT C2 H21 sing N N 306 OCT C2 H22 sing N N 307 OCT C3 C4 sing N N 308 OCT C3 H31 sing N N 309 OCT C3 H32 sing N N 310 OCT C4 C5 sing N N 311 OCT C4 H41 sing N N 312 OCT C4 H42 sing N N 313 OCT C5 C6 sing N N 314 OCT C5 H51 sing N N 315 OCT C5 H52 sing N N 316 OCT C6 C7 sing N N 317 OCT C6 H61 sing N N 318 OCT C6 H62 sing N N 319 OCT C7 C8 sing N N 320 OCT C7 H71 sing N N 321 OCT C7 H72 sing N N 322 OCT C8 H81 sing N N 323 OCT C8 H82 sing N N 324 OCT C8 H83 sing N N 325 PHE N CA sing N N 326 PHE N H sing N N 327 PHE N H2 sing N N 328 PHE CA C sing N N 329 PHE CA CB sing N N 330 PHE CA HA sing N N 331 PHE C O doub N N 332 PHE C OXT sing N N 333 PHE CB CG sing N N 334 PHE CB HB2 sing N N 335 PHE CB HB3 sing N N 336 PHE CG CD1 doub Y N 337 PHE CG CD2 sing Y N 338 PHE CD1 CE1 sing Y N 339 PHE CD1 HD1 sing N N 340 PHE CD2 CE2 doub Y N 341 PHE CD2 HD2 sing N N 342 PHE CE1 CZ doub Y N 343 PHE CE1 HE1 sing N N 344 PHE CE2 CZ sing Y N 345 PHE CE2 HE2 sing N N 346 PHE CZ HZ sing N N 347 PHE OXT HXT sing N N 348 PRO N CA sing N N 349 PRO N CD sing N N 350 PRO N H sing N N 351 PRO CA C sing N N 352 PRO CA CB sing N N 353 PRO CA HA sing N N 354 PRO C O doub N N 355 PRO C OXT sing N N 356 PRO CB CG sing N N 357 PRO CB HB2 sing N N 358 PRO CB HB3 sing N N 359 PRO CG CD sing N N 360 PRO CG HG2 sing N N 361 PRO CG HG3 sing N N 362 PRO CD HD2 sing N N 363 PRO CD HD3 sing N N 364 PRO OXT HXT sing N N 365 SER N CA sing N N 366 SER N H sing N N 367 SER N H2 sing N N 368 SER CA C sing N N 369 SER CA CB sing N N 370 SER CA HA sing N N 371 SER C O doub N N 372 SER C OXT sing N N 373 SER CB OG sing N N 374 SER CB HB2 sing N N 375 SER CB HB3 sing N N 376 SER OG HG sing N N 377 SER OXT HXT sing N N 378 THR N CA sing N N 379 THR N H sing N N 380 THR N H2 sing N N 381 THR CA C sing N N 382 THR CA CB sing N N 383 THR CA HA sing N N 384 THR C O doub N N 385 THR C OXT sing N N 386 THR CB OG1 sing N N 387 THR CB CG2 sing N N 388 THR CB HB sing N N 389 THR OG1 HG1 sing N N 390 THR CG2 HG21 sing N N 391 THR CG2 HG22 sing N N 392 THR CG2 HG23 sing N N 393 THR OXT HXT sing N N 394 TRP N CA sing N N 395 TRP N H sing N N 396 TRP N H2 sing N N 397 TRP CA C sing N N 398 TRP CA CB sing N N 399 TRP CA HA sing N N 400 TRP C O doub N N 401 TRP C OXT sing N N 402 TRP CB CG sing N N 403 TRP CB HB2 sing N N 404 TRP CB HB3 sing N N 405 TRP CG CD1 doub Y N 406 TRP CG CD2 sing Y N 407 TRP CD1 NE1 sing Y N 408 TRP CD1 HD1 sing N N 409 TRP CD2 CE2 doub Y N 410 TRP CD2 CE3 sing Y N 411 TRP NE1 CE2 sing Y N 412 TRP NE1 HE1 sing N N 413 TRP CE2 CZ2 sing Y N 414 TRP CE3 CZ3 doub Y N 415 TRP CE3 HE3 sing N N 416 TRP CZ2 CH2 doub Y N 417 TRP CZ2 HZ2 sing N N 418 TRP CZ3 CH2 sing Y N 419 TRP CZ3 HZ3 sing N N 420 TRP CH2 HH2 sing N N 421 TRP OXT HXT sing N N 422 TYR N CA sing N N 423 TYR N H sing N N 424 TYR N H2 sing N N 425 TYR CA C sing N N 426 TYR CA CB sing N N 427 TYR CA HA sing N N 428 TYR C O doub N N 429 TYR C OXT sing N N 430 TYR CB CG sing N N 431 TYR CB HB2 sing N N 432 TYR CB HB3 sing N N 433 TYR CG CD1 doub Y N 434 TYR CG CD2 sing Y N 435 TYR CD1 CE1 sing Y N 436 TYR CD1 HD1 sing N N 437 TYR CD2 CE2 doub Y N 438 TYR CD2 HD2 sing N N 439 TYR CE1 CZ doub Y N 440 TYR CE1 HE1 sing N N 441 TYR CE2 CZ sing Y N 442 TYR CE2 HE2 sing N N 443 TYR CZ OH sing N N 444 TYR OH HH sing N N 445 TYR OXT HXT sing N N 446 VAL N CA sing N N 447 VAL N H sing N N 448 VAL N H2 sing N N 449 VAL CA C sing N N 450 VAL CA CB sing N N 451 VAL CA HA sing N N 452 VAL C O doub N N 453 VAL C OXT sing N N 454 VAL CB CG1 sing N N 455 VAL CB CG2 sing N N 456 VAL CB HB sing N N 457 VAL CG1 HG11 sing N N 458 VAL CG1 HG12 sing N N 459 VAL CG1 HG13 sing N N 460 VAL CG2 HG21 sing N N 461 VAL CG2 HG22 sing N N 462 VAL CG2 HG23 sing N N 463 VAL OXT HXT sing N N 464 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 ADA 1 B ADA 1 X ADA 400 n B 2 ADA 2 B ADA 2 X ADA 401 n B 2 ADA 3 B ADA 3 X ADA 402 n B 2 ADA 4 B ADA 4 X ADA 403 n B 2 ADA 5 B ADA 5 X ADA 404 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier ADA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpAa ADA 'COMMON NAME' GMML 1.0 'a-D-galactopyranuronic acid' ADA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-GalpA ADA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GalA # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DGalpAa1-4DGalpAa1-4DGalpAa1-4DGalpAa1-4DGalpAa1-ROH 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/1,5,4/[a2112A-1a_1-5]/1-1-1-1-1/a4-b1_b4-c1_c4-d1_d4-e1' WURCS PDB2Glycan 1.1.0 3 2 '[][a-D-GalpA]{[(4+1)][a-D-GalpA]{[(4+1)][a-D-GalpA]{[(4+1)][a-D-GalpA]{[(4+1)][a-D-GalpA]{}}}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 2 2 ADA C1 O1 1 ADA O4 HO4 sing ? 2 2 3 ADA C1 O1 2 ADA O4 HO4 sing ? 3 2 4 ADA C1 O1 3 ADA O4 HO4 sing ? 4 2 5 ADA C1 O1 4 ADA O4 HO4 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 ADA 1 n 2 ADA 2 n 2 ADA 3 n 2 ADA 4 n 2 ADA 5 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 N-OCTANE OCT 4 '(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE' C8E 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4FQE _pdbx_initial_refinement_model.details 'PDB ENTRY 4FQE' #