data_4QJR # _entry.id 4QJR # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4QJR pdb_00004qjr 10.2210/pdb4qjr/pdb RCSB RCSB086142 ? ? WWPDB D_1000086142 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-07-30 2 'Structure model' 1 1 2014-11-12 3 'Structure model' 1 2 2017-11-22 4 'Structure model' 1 3 2023-02-01 5 'Structure model' 1 4 2023-09-20 6 'Structure model' 1 5 2024-03-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' 5 4 'Structure model' 'Structure summary' 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Refinement description' 8 6 'Structure model' 'Source and taxonomy' 9 6 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' chem_comp 3 4 'Structure model' database_2 4 4 'Structure model' entity 5 4 'Structure model' pdbx_entity_nonpoly 6 4 'Structure model' struct_ref_seq_dif 7 4 'Structure model' struct_site 8 5 'Structure model' chem_comp_atom 9 5 'Structure model' chem_comp_bond 10 5 'Structure model' pdbx_initial_refinement_model 11 6 'Structure model' entity 12 6 'Structure model' pdbx_entity_src_syn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' 3 4 'Structure model' '_chem_comp.name' 4 4 'Structure model' '_database_2.pdbx_DOI' 5 4 'Structure model' '_database_2.pdbx_database_accession' 6 4 'Structure model' '_entity.pdbx_description' 7 4 'Structure model' '_pdbx_entity_nonpoly.name' 8 4 'Structure model' '_struct_ref_seq_dif.details' 9 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 10 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 11 4 'Structure model' '_struct_site.pdbx_auth_seq_id' 12 6 'Structure model' '_entity.details' # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 4QJR _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2014-06-04 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type TargetTrack JCSG-429246 . unspecified TargetTrack JCSG-429245 . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Joint Center for Structural Genomics (JCSG)' 1 'Partnership for Stem Cell Biology (STEMCELL)' 2 # _citation.id primary _citation.title 'The signaling phospholipid PIP3 creates a new interaction surface on the nuclear receptor SF-1.' _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 111 _citation.page_first 15054 _citation.page_last 15059 _citation.year 2014 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 25288771 _citation.pdbx_database_id_DOI 10.1073/pnas.1416740111 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Blind, R.D.' 1 ? primary 'Sablin, E.P.' 2 ? primary 'Kuchenbecker, K.M.' 3 ? primary 'Chiu, H.J.' 4 ? primary 'Deacon, A.M.' 5 ? primary 'Das, D.' 6 ? primary 'Fletterick, R.J.' 7 ? primary 'Ingraham, H.A.' 8 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Steroidogenic factor 1' 27903.406 1 ? 'C247S, C412S' 'UNP residues 218-461' ? 2 polymer syn 'Peroxisome proliferator-activated receptor gamma coactivator 1-alpha' 1523.854 1 ? ? 'UNP residues 139-152' ? 3 non-polymer syn ;(2S)-3-{[(R)-{[(1S,2S,3R,4S,5S,6S)-2,6-dihydroxy-3,4,5-tris(phosphonooxy)cyclohexyl]oxy}(hydroxy)phosphoryl]oxy}propane -1,2-diyl dihexadecanoate ; 1050.972 1 ? ? ? 'SMILES string: CCCCCCCCCCCCCCCC(=O)OCC(CO[P](O)(=O)OC1C(O)C (O[P](O)(O)=O)C(O[P](O)(O)=O)C(O[P](O)(O)=O)C1O)OC(=O)CCCCCCCCCCCCCCC' 4 non-polymer syn 'ACETATE ION' 59.044 2 ? ? ? ? 5 water nat water 18.015 117 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 ;SF-1, STF-1, Adrenal 4-binding protein, Fushi tarazu factor homolog 1, Nuclear receptor subfamily 5 group A member 1, Steroid hormone receptor Ad4BP ; 2 'PGC-1-alpha, PPAR-gamma coactivator 1-alpha, PPARGC-1-alpha, Ligand effect modulator 6' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GSGGPNVPELILQLLQLEPDEDQVRARILGSLQEPTKSRPDQPAAFGLLCRMADQTFISIVDWARRCMVFKELEVADQMT LLQNCWSELLVFDHIYRQVQHGKEGSILLVTGQEVELTTVATQAGSLLHSLVLRAQELVLQLLALQLDRQEFVCLKFIIL FSLDLKFLNNHILVKDAQEKANAALLDYTLCHYPHSGDKFQQLLLCLVEVRALSMQAKEYLYHKHLGNEMPRNNLLIEML QAKQT ; ;GSGGPNVPELILQLLQLEPDEDQVRARILGSLQEPTKSRPDQPAAFGLLCRMADQTFISIVDWARRCMVFKELEVADQMT LLQNCWSELLVFDHIYRQVQHGKEGSILLVTGQEVELTTVATQAGSLLHSLVLRAQELVLQLLALQLDRQEFVCLKFIIL FSLDLKFLNNHILVKDAQEKANAALLDYTLCHYPHSGDKFQQLLLCLVEVRALSMQAKEYLYHKHLGNEMPRNNLLIEML QAKQT ; A JCSG-429246 2 'polypeptide(L)' no no EEPSLLKKLLLAPA EEPSLLKKLLLAPA B JCSG-429245 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 ;(2S)-3-{[(R)-{[(1S,2S,3R,4S,5S,6S)-2,6-dihydroxy-3,4,5-tris(phosphonooxy)cyclohexyl]oxy}(hydroxy)phosphoryl]oxy}propane -1,2-diyl dihexadecanoate ; PIZ 4 'ACETATE ION' ACT 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 GLY n 1 4 GLY n 1 5 PRO n 1 6 ASN n 1 7 VAL n 1 8 PRO n 1 9 GLU n 1 10 LEU n 1 11 ILE n 1 12 LEU n 1 13 GLN n 1 14 LEU n 1 15 LEU n 1 16 GLN n 1 17 LEU n 1 18 GLU n 1 19 PRO n 1 20 ASP n 1 21 GLU n 1 22 ASP n 1 23 GLN n 1 24 VAL n 1 25 ARG n 1 26 ALA n 1 27 ARG n 1 28 ILE n 1 29 LEU n 1 30 GLY n 1 31 SER n 1 32 LEU n 1 33 GLN n 1 34 GLU n 1 35 PRO n 1 36 THR n 1 37 LYS n 1 38 SER n 1 39 ARG n 1 40 PRO n 1 41 ASP n 1 42 GLN n 1 43 PRO n 1 44 ALA n 1 45 ALA n 1 46 PHE n 1 47 GLY n 1 48 LEU n 1 49 LEU n 1 50 CYS n 1 51 ARG n 1 52 MET n 1 53 ALA n 1 54 ASP n 1 55 GLN n 1 56 THR n 1 57 PHE n 1 58 ILE n 1 59 SER n 1 60 ILE n 1 61 VAL n 1 62 ASP n 1 63 TRP n 1 64 ALA n 1 65 ARG n 1 66 ARG n 1 67 CYS n 1 68 MET n 1 69 VAL n 1 70 PHE n 1 71 LYS n 1 72 GLU n 1 73 LEU n 1 74 GLU n 1 75 VAL n 1 76 ALA n 1 77 ASP n 1 78 GLN n 1 79 MET n 1 80 THR n 1 81 LEU n 1 82 LEU n 1 83 GLN n 1 84 ASN n 1 85 CYS n 1 86 TRP n 1 87 SER n 1 88 GLU n 1 89 LEU n 1 90 LEU n 1 91 VAL n 1 92 PHE n 1 93 ASP n 1 94 HIS n 1 95 ILE n 1 96 TYR n 1 97 ARG n 1 98 GLN n 1 99 VAL n 1 100 GLN n 1 101 HIS n 1 102 GLY n 1 103 LYS n 1 104 GLU n 1 105 GLY n 1 106 SER n 1 107 ILE n 1 108 LEU n 1 109 LEU n 1 110 VAL n 1 111 THR n 1 112 GLY n 1 113 GLN n 1 114 GLU n 1 115 VAL n 1 116 GLU n 1 117 LEU n 1 118 THR n 1 119 THR n 1 120 VAL n 1 121 ALA n 1 122 THR n 1 123 GLN n 1 124 ALA n 1 125 GLY n 1 126 SER n 1 127 LEU n 1 128 LEU n 1 129 HIS n 1 130 SER n 1 131 LEU n 1 132 VAL n 1 133 LEU n 1 134 ARG n 1 135 ALA n 1 136 GLN n 1 137 GLU n 1 138 LEU n 1 139 VAL n 1 140 LEU n 1 141 GLN n 1 142 LEU n 1 143 LEU n 1 144 ALA n 1 145 LEU n 1 146 GLN n 1 147 LEU n 1 148 ASP n 1 149 ARG n 1 150 GLN n 1 151 GLU n 1 152 PHE n 1 153 VAL n 1 154 CYS n 1 155 LEU n 1 156 LYS n 1 157 PHE n 1 158 ILE n 1 159 ILE n 1 160 LEU n 1 161 PHE n 1 162 SER n 1 163 LEU n 1 164 ASP n 1 165 LEU n 1 166 LYS n 1 167 PHE n 1 168 LEU n 1 169 ASN n 1 170 ASN n 1 171 HIS n 1 172 ILE n 1 173 LEU n 1 174 VAL n 1 175 LYS n 1 176 ASP n 1 177 ALA n 1 178 GLN n 1 179 GLU n 1 180 LYS n 1 181 ALA n 1 182 ASN n 1 183 ALA n 1 184 ALA n 1 185 LEU n 1 186 LEU n 1 187 ASP n 1 188 TYR n 1 189 THR n 1 190 LEU n 1 191 CYS n 1 192 HIS n 1 193 TYR n 1 194 PRO n 1 195 HIS n 1 196 SER n 1 197 GLY n 1 198 ASP n 1 199 LYS n 1 200 PHE n 1 201 GLN n 1 202 GLN n 1 203 LEU n 1 204 LEU n 1 205 LEU n 1 206 CYS n 1 207 LEU n 1 208 VAL n 1 209 GLU n 1 210 VAL n 1 211 ARG n 1 212 ALA n 1 213 LEU n 1 214 SER n 1 215 MET n 1 216 GLN n 1 217 ALA n 1 218 LYS n 1 219 GLU n 1 220 TYR n 1 221 LEU n 1 222 TYR n 1 223 HIS n 1 224 LYS n 1 225 HIS n 1 226 LEU n 1 227 GLY n 1 228 ASN n 1 229 GLU n 1 230 MET n 1 231 PRO n 1 232 ARG n 1 233 ASN n 1 234 ASN n 1 235 LEU n 1 236 LEU n 1 237 ILE n 1 238 GLU n 1 239 MET n 1 240 LEU n 1 241 GLN n 1 242 ALA n 1 243 LYS n 1 244 GLN n 1 245 THR n 2 1 GLU n 2 2 GLU n 2 3 PRO n 2 4 SER n 2 5 LEU n 2 6 LEU n 2 7 LYS n 2 8 LYS n 2 9 LEU n 2 10 LEU n 2 11 LEU n 2 12 ALA n 2 13 PRO n 2 14 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'AD4BP, FTZF1, NR5A1, RC2003B, SF1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia Coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pBH4 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name human _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ;PGC-1ALPHA (PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA CO-ACTIVATOR-1ALPHA) PEPTIDE CONTAINING RESIDUES 139-EEPSLLKKLLLAPA-152 ; # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PIZ non-polymer . ;(2S)-3-{[(R)-{[(1S,2S,3R,4S,5S,6S)-2,6-dihydroxy-3,4,5-tris(phosphonooxy)cyclohexyl]oxy}(hydroxy)phosphoryl]oxy}propane -1,2-diyl dihexadecanoate ; 'PI(3,4,5)P3 dipalmitoyl (16:0, 16:0)' 'C41 H82 O22 P4' 1050.972 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 SER 2 218 218 SER SER A . n A 1 3 GLY 3 219 219 GLY GLY A . n A 1 4 GLY 4 220 220 GLY GLY A . n A 1 5 PRO 5 221 221 PRO PRO A . n A 1 6 ASN 6 222 222 ASN ASN A . n A 1 7 VAL 7 223 223 VAL VAL A . n A 1 8 PRO 8 224 224 PRO PRO A . n A 1 9 GLU 9 225 225 GLU GLU A . n A 1 10 LEU 10 226 226 LEU LEU A . n A 1 11 ILE 11 227 227 ILE ILE A . n A 1 12 LEU 12 228 228 LEU LEU A . n A 1 13 GLN 13 229 229 GLN GLN A . n A 1 14 LEU 14 230 230 LEU LEU A . n A 1 15 LEU 15 231 231 LEU LEU A . n A 1 16 GLN 16 232 232 GLN GLN A . n A 1 17 LEU 17 233 233 LEU LEU A . n A 1 18 GLU 18 234 234 GLU GLU A . n A 1 19 PRO 19 235 235 PRO PRO A . n A 1 20 ASP 20 236 236 ASP ASP A . n A 1 21 GLU 21 237 237 GLU GLU A . n A 1 22 ASP 22 238 238 ASP ASP A . n A 1 23 GLN 23 239 239 GLN GLN A . n A 1 24 VAL 24 240 240 VAL VAL A . n A 1 25 ARG 25 241 241 ARG ARG A . n A 1 26 ALA 26 242 242 ALA ALA A . n A 1 27 ARG 27 243 243 ARG ARG A . n A 1 28 ILE 28 244 244 ILE ILE A . n A 1 29 LEU 29 245 245 LEU LEU A . n A 1 30 GLY 30 246 246 GLY GLY A . n A 1 31 SER 31 247 247 SER SER A . n A 1 32 LEU 32 248 248 LEU LEU A . n A 1 33 GLN 33 249 249 GLN GLN A . n A 1 34 GLU 34 250 250 GLU GLU A . n A 1 35 PRO 35 251 251 PRO PRO A . n A 1 36 THR 36 252 252 THR THR A . n A 1 37 LYS 37 253 253 LYS LYS A . n A 1 38 SER 38 254 254 SER SER A . n A 1 39 ARG 39 255 255 ARG ARG A . n A 1 40 PRO 40 256 256 PRO PRO A . n A 1 41 ASP 41 257 257 ASP ASP A . n A 1 42 GLN 42 258 258 GLN GLN A . n A 1 43 PRO 43 259 259 PRO PRO A . n A 1 44 ALA 44 260 260 ALA ALA A . n A 1 45 ALA 45 261 261 ALA ALA A . n A 1 46 PHE 46 262 262 PHE PHE A . n A 1 47 GLY 47 263 263 GLY GLY A . n A 1 48 LEU 48 264 264 LEU LEU A . n A 1 49 LEU 49 265 265 LEU LEU A . n A 1 50 CYS 50 266 266 CYS CYS A . n A 1 51 ARG 51 267 267 ARG ARG A . n A 1 52 MET 52 268 268 MET MET A . n A 1 53 ALA 53 269 269 ALA ALA A . n A 1 54 ASP 54 270 270 ASP ASP A . n A 1 55 GLN 55 271 271 GLN GLN A . n A 1 56 THR 56 272 272 THR THR A . n A 1 57 PHE 57 273 273 PHE PHE A . n A 1 58 ILE 58 274 274 ILE ILE A . n A 1 59 SER 59 275 275 SER SER A . n A 1 60 ILE 60 276 276 ILE ILE A . n A 1 61 VAL 61 277 277 VAL VAL A . n A 1 62 ASP 62 278 278 ASP ASP A . n A 1 63 TRP 63 279 279 TRP TRP A . n A 1 64 ALA 64 280 280 ALA ALA A . n A 1 65 ARG 65 281 281 ARG ARG A . n A 1 66 ARG 66 282 282 ARG ARG A . n A 1 67 CYS 67 283 283 CYS CYS A . n A 1 68 MET 68 284 284 MET MET A . n A 1 69 VAL 69 285 285 VAL VAL A . n A 1 70 PHE 70 286 286 PHE PHE A . n A 1 71 LYS 71 287 287 LYS LYS A . n A 1 72 GLU 72 288 288 GLU GLU A . n A 1 73 LEU 73 289 289 LEU LEU A . n A 1 74 GLU 74 290 290 GLU GLU A . n A 1 75 VAL 75 291 291 VAL VAL A . n A 1 76 ALA 76 292 292 ALA ALA A . n A 1 77 ASP 77 293 293 ASP ASP A . n A 1 78 GLN 78 294 294 GLN GLN A . n A 1 79 MET 79 295 295 MET MET A . n A 1 80 THR 80 296 296 THR THR A . n A 1 81 LEU 81 297 297 LEU LEU A . n A 1 82 LEU 82 298 298 LEU LEU A . n A 1 83 GLN 83 299 299 GLN GLN A . n A 1 84 ASN 84 300 300 ASN ASN A . n A 1 85 CYS 85 301 301 CYS CYS A . n A 1 86 TRP 86 302 302 TRP TRP A . n A 1 87 SER 87 303 303 SER SER A . n A 1 88 GLU 88 304 304 GLU GLU A . n A 1 89 LEU 89 305 305 LEU LEU A . n A 1 90 LEU 90 306 306 LEU LEU A . n A 1 91 VAL 91 307 307 VAL VAL A . n A 1 92 PHE 92 308 308 PHE PHE A . n A 1 93 ASP 93 309 309 ASP ASP A . n A 1 94 HIS 94 310 310 HIS HIS A . n A 1 95 ILE 95 311 311 ILE ILE A . n A 1 96 TYR 96 312 312 TYR TYR A . n A 1 97 ARG 97 313 313 ARG ARG A . n A 1 98 GLN 98 314 314 GLN GLN A . n A 1 99 VAL 99 315 315 VAL VAL A . n A 1 100 GLN 100 316 316 GLN GLN A . n A 1 101 HIS 101 317 317 HIS HIS A . n A 1 102 GLY 102 318 318 GLY GLY A . n A 1 103 LYS 103 319 319 LYS LYS A . n A 1 104 GLU 104 320 320 GLU GLU A . n A 1 105 GLY 105 321 321 GLY GLY A . n A 1 106 SER 106 322 322 SER SER A . n A 1 107 ILE 107 323 323 ILE ILE A . n A 1 108 LEU 108 324 324 LEU LEU A . n A 1 109 LEU 109 325 325 LEU LEU A . n A 1 110 VAL 110 326 326 VAL VAL A . n A 1 111 THR 111 327 327 THR THR A . n A 1 112 GLY 112 328 328 GLY GLY A . n A 1 113 GLN 113 329 329 GLN GLN A . n A 1 114 GLU 114 330 330 GLU GLU A . n A 1 115 VAL 115 331 331 VAL VAL A . n A 1 116 GLU 116 332 332 GLU GLU A . n A 1 117 LEU 117 333 333 LEU LEU A . n A 1 118 THR 118 334 334 THR THR A . n A 1 119 THR 119 335 335 THR THR A . n A 1 120 VAL 120 336 336 VAL VAL A . n A 1 121 ALA 121 337 337 ALA ALA A . n A 1 122 THR 122 338 338 THR THR A . n A 1 123 GLN 123 339 339 GLN GLN A . n A 1 124 ALA 124 340 340 ALA ALA A . n A 1 125 GLY 125 341 341 GLY GLY A . n A 1 126 SER 126 342 342 SER SER A . n A 1 127 LEU 127 343 343 LEU LEU A . n A 1 128 LEU 128 344 344 LEU LEU A . n A 1 129 HIS 129 345 345 HIS HIS A . n A 1 130 SER 130 346 346 SER SER A . n A 1 131 LEU 131 347 347 LEU LEU A . n A 1 132 VAL 132 348 348 VAL VAL A . n A 1 133 LEU 133 349 349 LEU LEU A . n A 1 134 ARG 134 350 350 ARG ARG A . n A 1 135 ALA 135 351 351 ALA ALA A . n A 1 136 GLN 136 352 352 GLN GLN A . n A 1 137 GLU 137 353 353 GLU GLU A . n A 1 138 LEU 138 354 354 LEU LEU A . n A 1 139 VAL 139 355 355 VAL VAL A . n A 1 140 LEU 140 356 356 LEU LEU A . n A 1 141 GLN 141 357 357 GLN GLN A . n A 1 142 LEU 142 358 358 LEU LEU A . n A 1 143 LEU 143 359 359 LEU LEU A . n A 1 144 ALA 144 360 360 ALA ALA A . n A 1 145 LEU 145 361 361 LEU LEU A . n A 1 146 GLN 146 362 362 GLN GLN A . n A 1 147 LEU 147 363 363 LEU LEU A . n A 1 148 ASP 148 364 364 ASP ASP A . n A 1 149 ARG 149 365 365 ARG ARG A . n A 1 150 GLN 150 366 366 GLN GLN A . n A 1 151 GLU 151 367 367 GLU GLU A . n A 1 152 PHE 152 368 368 PHE PHE A . n A 1 153 VAL 153 369 369 VAL VAL A . n A 1 154 CYS 154 370 370 CYS CYS A . n A 1 155 LEU 155 371 371 LEU LEU A . n A 1 156 LYS 156 372 372 LYS LYS A . n A 1 157 PHE 157 373 373 PHE PHE A . n A 1 158 ILE 158 374 374 ILE ILE A . n A 1 159 ILE 159 375 375 ILE ILE A . n A 1 160 LEU 160 376 376 LEU LEU A . n A 1 161 PHE 161 377 377 PHE PHE A . n A 1 162 SER 162 378 378 SER SER A . n A 1 163 LEU 163 379 379 LEU LEU A . n A 1 164 ASP 164 380 380 ASP ASP A . n A 1 165 LEU 165 381 381 LEU LEU A . n A 1 166 LYS 166 382 382 LYS LYS A . n A 1 167 PHE 167 383 383 PHE PHE A . n A 1 168 LEU 168 384 384 LEU LEU A . n A 1 169 ASN 169 385 385 ASN ASN A . n A 1 170 ASN 170 386 386 ASN ASN A . n A 1 171 HIS 171 387 387 HIS HIS A . n A 1 172 ILE 172 388 388 ILE ILE A . n A 1 173 LEU 173 389 389 LEU LEU A . n A 1 174 VAL 174 390 390 VAL VAL A . n A 1 175 LYS 175 391 391 LYS LYS A . n A 1 176 ASP 176 392 392 ASP ASP A . n A 1 177 ALA 177 393 393 ALA ALA A . n A 1 178 GLN 178 394 394 GLN GLN A . n A 1 179 GLU 179 395 395 GLU GLU A . n A 1 180 LYS 180 396 396 LYS LYS A . n A 1 181 ALA 181 397 397 ALA ALA A . n A 1 182 ASN 182 398 398 ASN ASN A . n A 1 183 ALA 183 399 399 ALA ALA A . n A 1 184 ALA 184 400 400 ALA ALA A . n A 1 185 LEU 185 401 401 LEU LEU A . n A 1 186 LEU 186 402 402 LEU LEU A . n A 1 187 ASP 187 403 403 ASP ASP A . n A 1 188 TYR 188 404 404 TYR TYR A . n A 1 189 THR 189 405 405 THR THR A . n A 1 190 LEU 190 406 406 LEU LEU A . n A 1 191 CYS 191 407 407 CYS CYS A . n A 1 192 HIS 192 408 408 HIS HIS A . n A 1 193 TYR 193 409 409 TYR TYR A . n A 1 194 PRO 194 410 410 PRO PRO A . n A 1 195 HIS 195 411 411 HIS HIS A . n A 1 196 SER 196 412 412 SER SER A . n A 1 197 GLY 197 413 413 GLY GLY A . n A 1 198 ASP 198 414 414 ASP ASP A . n A 1 199 LYS 199 415 415 LYS LYS A . n A 1 200 PHE 200 416 416 PHE PHE A . n A 1 201 GLN 201 417 417 GLN GLN A . n A 1 202 GLN 202 418 418 GLN GLN A . n A 1 203 LEU 203 419 419 LEU LEU A . n A 1 204 LEU 204 420 420 LEU LEU A . n A 1 205 LEU 205 421 421 LEU LEU A . n A 1 206 CYS 206 422 422 CYS CYS A . n A 1 207 LEU 207 423 423 LEU LEU A . n A 1 208 VAL 208 424 424 VAL VAL A . n A 1 209 GLU 209 425 425 GLU GLU A . n A 1 210 VAL 210 426 426 VAL VAL A . n A 1 211 ARG 211 427 427 ARG ARG A . n A 1 212 ALA 212 428 428 ALA ALA A . n A 1 213 LEU 213 429 429 LEU LEU A . n A 1 214 SER 214 430 430 SER SER A . n A 1 215 MET 215 431 431 MET MET A . n A 1 216 GLN 216 432 432 GLN GLN A . n A 1 217 ALA 217 433 433 ALA ALA A . n A 1 218 LYS 218 434 434 LYS LYS A . n A 1 219 GLU 219 435 435 GLU GLU A . n A 1 220 TYR 220 436 436 TYR TYR A . n A 1 221 LEU 221 437 437 LEU LEU A . n A 1 222 TYR 222 438 438 TYR TYR A . n A 1 223 HIS 223 439 439 HIS HIS A . n A 1 224 LYS 224 440 440 LYS LYS A . n A 1 225 HIS 225 441 441 HIS HIS A . n A 1 226 LEU 226 442 442 LEU LEU A . n A 1 227 GLY 227 443 443 GLY GLY A . n A 1 228 ASN 228 444 444 ASN ASN A . n A 1 229 GLU 229 445 445 GLU GLU A . n A 1 230 MET 230 446 446 MET MET A . n A 1 231 PRO 231 447 447 PRO PRO A . n A 1 232 ARG 232 448 448 ARG ARG A . n A 1 233 ASN 233 449 449 ASN ASN A . n A 1 234 ASN 234 450 450 ASN ASN A . n A 1 235 LEU 235 451 451 LEU LEU A . n A 1 236 LEU 236 452 452 LEU LEU A . n A 1 237 ILE 237 453 453 ILE ILE A . n A 1 238 GLU 238 454 454 GLU GLU A . n A 1 239 MET 239 455 455 MET MET A . n A 1 240 LEU 240 456 456 LEU LEU A . n A 1 241 GLN 241 457 457 GLN GLN A . n A 1 242 ALA 242 458 458 ALA ALA A . n A 1 243 LYS 243 459 459 LYS LYS A . n A 1 244 GLN 244 460 460 GLN GLN A . n A 1 245 THR 245 461 461 THR THR A . n B 2 1 GLU 1 139 ? ? ? B . n B 2 2 GLU 2 140 ? ? ? B . n B 2 3 PRO 3 141 141 PRO PRO B . n B 2 4 SER 4 142 142 SER SER B . n B 2 5 LEU 5 143 143 LEU LEU B . n B 2 6 LEU 6 144 144 LEU LEU B . n B 2 7 LYS 7 145 145 LYS LYS B . n B 2 8 LYS 8 146 146 LYS LYS B . n B 2 9 LEU 9 147 147 LEU LEU B . n B 2 10 LEU 10 148 148 LEU LEU B . n B 2 11 LEU 11 149 149 LEU LEU B . n B 2 12 ALA 12 150 150 ALA ALA B . n B 2 13 PRO 13 151 151 PRO PRO B . n B 2 14 ALA 14 152 152 ALA ALA B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 PIZ 1 501 1 PIZ PIZ A . D 4 ACT 1 502 501 ACT ACT A . E 4 ACT 1 503 502 ACT ACT A . F 5 HOH 1 601 503 HOH HOH A . F 5 HOH 2 602 504 HOH HOH A . F 5 HOH 3 603 505 HOH HOH A . F 5 HOH 4 604 506 HOH HOH A . F 5 HOH 5 605 507 HOH HOH A . F 5 HOH 6 606 508 HOH HOH A . F 5 HOH 7 607 509 HOH HOH A . F 5 HOH 8 608 510 HOH HOH A . F 5 HOH 9 609 511 HOH HOH A . F 5 HOH 10 610 512 HOH HOH A . F 5 HOH 11 611 513 HOH HOH A . F 5 HOH 12 612 514 HOH HOH A . F 5 HOH 13 613 515 HOH HOH A . F 5 HOH 14 614 516 HOH HOH A . F 5 HOH 15 615 517 HOH HOH A . F 5 HOH 16 616 518 HOH HOH A . F 5 HOH 17 617 519 HOH HOH A . F 5 HOH 18 618 520 HOH HOH A . F 5 HOH 19 619 521 HOH HOH A . F 5 HOH 20 620 522 HOH HOH A . F 5 HOH 21 621 523 HOH HOH A . F 5 HOH 22 622 524 HOH HOH A . F 5 HOH 23 623 525 HOH HOH A . F 5 HOH 24 624 526 HOH HOH A . F 5 HOH 25 625 527 HOH HOH A . F 5 HOH 26 626 528 HOH HOH A . F 5 HOH 27 627 529 HOH HOH A . F 5 HOH 28 628 530 HOH HOH A . F 5 HOH 29 629 531 HOH HOH A . F 5 HOH 30 630 532 HOH HOH A . F 5 HOH 31 631 533 HOH HOH A . F 5 HOH 32 632 534 HOH HOH A . F 5 HOH 33 633 535 HOH HOH A . F 5 HOH 34 634 536 HOH HOH A . F 5 HOH 35 635 537 HOH HOH A . F 5 HOH 36 636 538 HOH HOH A . F 5 HOH 37 637 539 HOH HOH A . F 5 HOH 38 638 540 HOH HOH A . F 5 HOH 39 639 541 HOH HOH A . F 5 HOH 40 640 542 HOH HOH A . F 5 HOH 41 641 543 HOH HOH A . F 5 HOH 42 642 544 HOH HOH A . F 5 HOH 43 643 545 HOH HOH A . F 5 HOH 44 644 546 HOH HOH A . F 5 HOH 45 645 547 HOH HOH A . F 5 HOH 46 646 548 HOH HOH A . F 5 HOH 47 647 549 HOH HOH A . F 5 HOH 48 648 550 HOH HOH A . F 5 HOH 49 649 551 HOH HOH A . F 5 HOH 50 650 552 HOH HOH A . F 5 HOH 51 651 553 HOH HOH A . F 5 HOH 52 652 554 HOH HOH A . F 5 HOH 53 653 555 HOH HOH A . F 5 HOH 54 654 556 HOH HOH A . F 5 HOH 55 655 557 HOH HOH A . F 5 HOH 56 656 558 HOH HOH A . F 5 HOH 57 657 559 HOH HOH A . F 5 HOH 58 658 560 HOH HOH A . F 5 HOH 59 659 561 HOH HOH A . F 5 HOH 60 660 562 HOH HOH A . F 5 HOH 61 661 563 HOH HOH A . F 5 HOH 62 662 564 HOH HOH A . F 5 HOH 63 663 565 HOH HOH A . F 5 HOH 64 664 566 HOH HOH A . F 5 HOH 65 665 567 HOH HOH A . F 5 HOH 66 666 568 HOH HOH A . F 5 HOH 67 667 569 HOH HOH A . F 5 HOH 68 668 570 HOH HOH A . F 5 HOH 69 669 571 HOH HOH A . F 5 HOH 70 670 572 HOH HOH A . F 5 HOH 71 671 573 HOH HOH A . F 5 HOH 72 672 574 HOH HOH A . F 5 HOH 73 673 575 HOH HOH A . F 5 HOH 74 674 576 HOH HOH A . F 5 HOH 75 675 577 HOH HOH A . F 5 HOH 76 676 578 HOH HOH A . F 5 HOH 77 677 579 HOH HOH A . F 5 HOH 78 678 580 HOH HOH A . F 5 HOH 79 679 581 HOH HOH A . F 5 HOH 80 680 582 HOH HOH A . F 5 HOH 81 681 583 HOH HOH A . F 5 HOH 82 682 584 HOH HOH A . F 5 HOH 83 683 585 HOH HOH A . F 5 HOH 84 684 586 HOH HOH A . F 5 HOH 85 685 587 HOH HOH A . F 5 HOH 86 686 588 HOH HOH A . F 5 HOH 87 687 589 HOH HOH A . F 5 HOH 88 688 590 HOH HOH A . F 5 HOH 89 689 591 HOH HOH A . F 5 HOH 90 690 592 HOH HOH A . F 5 HOH 91 691 593 HOH HOH A . F 5 HOH 92 692 594 HOH HOH A . F 5 HOH 93 693 595 HOH HOH A . F 5 HOH 94 694 596 HOH HOH A . F 5 HOH 95 695 597 HOH HOH A . F 5 HOH 96 696 598 HOH HOH A . F 5 HOH 97 697 599 HOH HOH A . F 5 HOH 98 698 600 HOH HOH A . F 5 HOH 99 699 601 HOH HOH A . F 5 HOH 100 700 602 HOH HOH A . F 5 HOH 101 701 603 HOH HOH A . F 5 HOH 102 702 604 HOH HOH A . F 5 HOH 103 703 605 HOH HOH A . F 5 HOH 104 704 606 HOH HOH A . F 5 HOH 105 705 607 HOH HOH A . F 5 HOH 106 706 608 HOH HOH A . F 5 HOH 107 707 609 HOH HOH A . F 5 HOH 108 708 610 HOH HOH A . F 5 HOH 109 709 611 HOH HOH A . F 5 HOH 110 710 612 HOH HOH A . F 5 HOH 111 711 613 HOH HOH A . F 5 HOH 112 712 614 HOH HOH A . F 5 HOH 113 713 615 HOH HOH A . F 5 HOH 114 714 616 HOH HOH A . F 5 HOH 115 715 617 HOH HOH A . F 5 HOH 116 716 618 HOH HOH A . F 5 HOH 117 717 619 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 253 ? CG ? A LYS 37 CG 2 1 Y 1 A LYS 253 ? CD ? A LYS 37 CD 3 1 Y 1 A LYS 253 ? CE ? A LYS 37 CE 4 1 Y 1 A LYS 253 ? NZ ? A LYS 37 NZ # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 2 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 PHENIX 1.8.2_1309 ? package 'P.D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 4 SCALA 3.3.20 ? package 'Phil Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' ? ? ? 5 MOSFLM . ? ? ? ? 'data reduction' ? ? ? 6 PHASER . ? ? ? ? phasing ? ? ? # _cell.entry_id 4QJR _cell.length_a 74.850 _cell.length_b 74.850 _cell.length_c 139.630 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4QJR _symmetry.Int_Tables_number 92 _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 4QJR # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 3.32 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 62.98 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.pdbx_details ;10% PEG 8K, 0.025M MGOAC, 30% GLYCEROL, 0.067MM PIP3, 0.80MM 14MER EEPSLLKKLLLAPA, NANODROP, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K ; _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp 277 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.pH ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.details 'Flat mirror (vertical focusing); single crystal Si(111) bent monochromator (horizontal focusing)' _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.pdbx_collection_date 2013-07-02 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'single crystal Si(111) bent' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_wavelength 1.0 _diffrn_source.pdbx_wavelength_list ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.limit_k_max ? _reflns.d_resolution_high 2.40 _reflns.observed_criterion_F_min ? _reflns.pdbx_netI_over_sigmaI 24.600 _reflns.observed_criterion_F_max ? _reflns.pdbx_Rmerge_I_obs ? _reflns.limit_l_max ? _reflns.limit_k_min ? _reflns.entry_id 4QJR _reflns.B_iso_Wilson_estimate ? _reflns.percent_possible_obs 99.600 _reflns.pdbx_Rsym_value 0.043 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.limit_l_min ? _reflns.limit_h_min ? _reflns.R_free_details ? _reflns.number_all 16205 _reflns.d_resolution_low 29.165 _reflns.pdbx_redundancy 11.900 _reflns.number_obs 16205 _reflns.limit_h_max ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.400 2.460 ? 10120 ? 0.710 1.1 0.710 ? 8.900 ? 1136 98.500 1 1 2.460 2.530 ? 13470 ? 0.606 1.3 0.606 ? 11.800 ? 1146 99.600 2 1 2.530 2.600 ? 13450 ? 0.413 1.9 0.413 ? 12.100 ? 1110 99.700 3 1 2.600 2.680 ? 12927 ? 0.356 2.2 0.356 ? 12.000 ? 1075 99.800 4 1 2.680 2.770 ? 13340 ? 0.253 3.0 0.253 ? 12.600 ? 1057 99.700 5 1 2.770 2.870 ? 12489 ? 0.187 3.9 0.187 ? 12.300 ? 1018 99.900 6 1 2.870 2.980 ? 10779 ? 0.136 5.2 0.136 ? 11.000 ? 984 100.000 7 1 2.980 3.100 ? 12047 ? 0.115 5.9 0.115 ? 12.700 ? 945 100.000 8 1 3.100 3.240 ? 11873 ? 0.092 6.9 0.092 ? 12.900 ? 922 100.000 9 1 3.240 3.390 ? 11369 ? 0.075 7.7 0.075 ? 12.900 ? 882 100.000 10 1 3.390 3.580 ? 10679 ? 0.065 8.7 0.065 ? 12.600 ? 845 100.000 11 1 3.580 3.790 ? 9118 ? 0.054 10.6 0.054 ? 11.600 ? 789 99.800 12 1 3.790 4.060 ? 8712 ? 0.050 11.7 0.050 ? 11.900 ? 734 98.700 13 1 4.060 4.380 ? 9479 ? 0.045 12.6 0.045 ? 13.300 ? 715 100.000 14 1 4.380 4.800 ? 8240 ? 0.040 14.5 0.040 ? 12.700 ? 651 100.000 15 1 4.800 5.370 ? 7083 ? 0.038 15.4 0.038 ? 11.700 ? 605 100.000 16 1 5.370 6.200 ? 5966 ? 0.038 16.1 0.038 ? 11.100 ? 537 99.900 17 1 6.200 7.590 ? 5643 ? 0.037 15.9 0.037 ? 12.100 ? 467 99.900 18 1 7.590 10.730 ? 3976 ? 0.027 18.1 0.027 ? 10.700 ? 370 99.600 19 1 10.730 29.165 ? 2264 ? 0.026 15.0 0.026 ? 10.400 ? 217 94.600 20 1 # _refine.ls_percent_reflns_R_free 4.9900 _refine.overall_SU_B ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_R_Free_selection_details ? _refine.overall_FOM_free_R_set ? _refine.pdbx_data_cutoff_low_absF ? _refine.entry_id 4QJR _refine.aniso_B[2][3] ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_ML 0.2400 _refine.pdbx_ls_sigma_I ? _refine.aniso_B[1][3] ? _refine.pdbx_stereochemistry_target_values ML _refine.aniso_B[3][3] ? _refine.occupancy_max 1.000 _refine.ls_number_restraints ? _refine.aniso_B[1][1] ? _refine.pdbx_overall_ESU_R ? _refine.ls_R_factor_obs 0.1914 _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_starting_model 'PDB entry 1YOW' _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.solvent_model_param_ksol ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.correlation_coeff_Fo_to_Fc ? _refine.ls_number_reflns_R_free 803 _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_ls_sigma_F 2.030 _refine.ls_percent_reflns_obs 99.5200 _refine.ls_R_factor_R_work 0.1895 _refine.overall_SU_R_free ? _refine.ls_d_res_high 2.4000 _refine.pdbx_overall_ESU_R_Free ? _refine.B_iso_min 34.790 _refine.occupancy_min 0.170 _refine.B_iso_mean 76.3499 _refine.pdbx_stereochem_target_val_spec_case ? _refine.ls_R_factor_all ? _refine.aniso_B[2][2] ? _refine.B_iso_max 148.660 _refine.ls_d_res_low 29.165 _refine.pdbx_overall_phase_error 26.8200 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.aniso_B[1][2] ? _refine.ls_R_factor_R_free 0.2296 _refine.ls_R_factor_R_free_error ? _refine.ls_number_reflns_obs 16099 _refine.overall_FOM_work_R_set ? _refine.ls_number_parameters ? _refine.details ? _refine.ls_number_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.solvent_model_param_bsol ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2038 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 75 _refine_hist.number_atoms_solvent 117 _refine_hist.number_atoms_total 2230 _refine_hist.d_res_high 2.4000 _refine_hist.d_res_low 29.165 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 2222 0.002 ? ? ? 'X-RAY DIFFRACTION' f_angle_d 3021 0.589 ? ? ? 'X-RAY DIFFRACTION' f_chiral_restr 351 0.040 ? ? ? 'X-RAY DIFFRACTION' f_plane_restr 380 0.002 ? ? ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 925 20.036 ? ? ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 2.4001 2.5503 6 99.0000 2461 . 0.2385 0.2637 . 130 . 2591 . . 'X-RAY DIFFRACTION' 2.5503 2.7470 6 99.0000 2495 . 0.2117 0.2678 . 129 . 2624 . . 'X-RAY DIFFRACTION' 2.7470 3.0230 6 100.0000 2518 . 0.2142 0.2434 . 133 . 2651 . . 'X-RAY DIFFRACTION' 3.0230 3.4594 6 100.0000 2534 . 0.2155 0.3065 . 134 . 2668 . . 'X-RAY DIFFRACTION' 3.4594 4.3546 6 99.0000 2564 . 0.1914 0.2308 . 135 . 2699 . . 'X-RAY DIFFRACTION' 4.3546 24.7467 6 100.0000 2724 . 0.1730 0.2018 . 142 . 2866 . . 'X-RAY DIFFRACTION' # _struct.entry_id 4QJR _struct.title 'Crystal structure of human nuclear receptor sf-1 (nr5a1) bound to its hormone pip3 at 2.4 a resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.pdbx_keywords 'TRANSCRIPTION FACTOR/HORMONE' _struct_keywords.text ;NUCLEAR HORMONE RECEPTOR, NR5A1, SF-1 LIGAND BINDINGNUCLEAR DOMAIN, REGULATORY LIGANDS, TRANSCRIPTION, TRANSCRIPTION REGULATION, STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI-BIOLOGY, PARTNERSHIP FOR STEM CELL BIOLOGY, PIP3, PIP2, NUCLEUS, NUCLEAR PHOSPHATIDYLINOSITOL PHOSPHATES, TRANSCRIPTION FACTOR-HORMONE complex, STEMCELL ; _struct_keywords.entry_id 4QJR # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP STF1_HUMAN Q13285 1 ;SGGPNVPELILQLLQLEPDEDQVRARILGCLQEPTKSRPDQPAAFGLLCRMADQTFISIVDWARRCMVFKELEVADQMTL LQNCWSELLVFDHIYRQVQHGKEGSILLVTGQEVELTTVATQAGSLLHSLVLRAQELVLQLLALQLDRQEFVCLKFIILF SLDLKFLNNHILVKDAQEKANAALLDYTLCHYPHCGDKFQQLLLCLVEVRALSMQAKEYLYHKHLGNEMPRNNLLIEMLQ AKQT ; 218 ? 2 UNP PRGC1_HUMAN Q9UBK2 2 EEPSLLKKLLLAPA 139 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4QJR A 2 ? 245 ? Q13285 218 ? 461 ? 218 461 2 2 4QJR B 1 ? 14 ? Q9UBK2 139 ? 152 ? 139 152 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4QJR GLY A 1 ? UNP Q13285 ? ? 'expression tag' 0 1 1 4QJR SER A 31 ? UNP Q13285 CYS 247 'engineered mutation' 247 2 1 4QJR SER A 196 ? UNP Q13285 CYS 412 'engineered mutation' 412 3 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1370 ? 1 MORE -12 ? 1 'SSA (A^2)' 13180 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 8 ? GLU A 18 ? PRO A 224 GLU A 234 1 ? 11 HELX_P HELX_P2 2 ASP A 20 ? GLN A 33 ? ASP A 236 GLN A 249 1 ? 14 HELX_P HELX_P3 3 PRO A 43 ? ARG A 66 ? PRO A 259 ARG A 282 1 ? 24 HELX_P HELX_P4 4 VAL A 69 ? LEU A 73 ? VAL A 285 LEU A 289 5 ? 5 HELX_P HELX_P5 5 GLU A 74 ? HIS A 101 ? GLU A 290 HIS A 317 1 ? 28 HELX_P HELX_P6 6 LEU A 117 ? ALA A 124 ? LEU A 333 ALA A 340 1 ? 8 HELX_P HELX_P7 7 GLY A 125 ? LEU A 145 ? GLY A 341 LEU A 361 1 ? 21 HELX_P HELX_P8 8 ASP A 148 ? PHE A 161 ? ASP A 364 PHE A 377 1 ? 14 HELX_P HELX_P9 9 ASP A 164 ? LEU A 168 ? ASP A 380 LEU A 384 5 ? 5 HELX_P HELX_P10 10 ASN A 170 ? TYR A 193 ? ASN A 386 TYR A 409 1 ? 24 HELX_P HELX_P11 11 ASP A 198 ? GLY A 227 ? ASP A 414 GLY A 443 1 ? 30 HELX_P HELX_P12 12 ASN A 234 ? GLN A 241 ? ASN A 450 GLN A 457 1 ? 8 HELX_P HELX_P13 13 SER B 4 ? LEU B 11 ? SER B 142 LEU B 149 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id A _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER A 106 ? LEU A 108 ? SER A 322 LEU A 324 A 2 GLU A 114 ? GLU A 116 ? GLU A 330 GLU A 332 # _pdbx_struct_sheet_hbond.sheet_id A _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id ILE _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 107 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id ILE _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 323 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id VAL _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 115 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id VAL _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 331 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A PIZ 501 ? 19 'BINDING SITE FOR RESIDUE PIZ A 501' AC2 Software A ACT 502 ? 10 'BINDING SITE FOR RESIDUE ACT A 502' AC3 Software A ACT 503 ? 4 'BINDING SITE FOR RESIDUE ACT A 503' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 19 PHE A 46 ? PHE A 262 . ? 1_555 ? 2 AC1 19 LEU A 49 ? LEU A 265 . ? 1_555 ? 3 AC1 19 LEU A 90 ? LEU A 306 . ? 1_555 ? 4 AC1 19 VAL A 120 ? VAL A 336 . ? 1_555 ? 5 AC1 19 GLN A 123 ? GLN A 339 . ? 1_555 ? 6 AC1 19 ALA A 124 ? ALA A 340 . ? 1_555 ? 7 AC1 19 GLY A 125 ? GLY A 341 . ? 1_555 ? 8 AC1 19 LEU A 128 ? LEU A 344 . ? 1_555 ? 9 AC1 19 ALA A 135 ? ALA A 351 . ? 1_555 ? 10 AC1 19 TYR A 220 ? TYR A 436 . ? 1_555 ? 11 AC1 19 LYS A 224 ? LYS A 440 . ? 1_555 ? 12 AC1 19 HOH F . ? HOH A 612 . ? 1_555 ? 13 AC1 19 HOH F . ? HOH A 613 . ? 1_555 ? 14 AC1 19 HOH F . ? HOH A 619 . ? 1_555 ? 15 AC1 19 HOH F . ? HOH A 654 . ? 1_555 ? 16 AC1 19 HOH F . ? HOH A 691 . ? 1_555 ? 17 AC1 19 HOH F . ? HOH A 694 . ? 1_555 ? 18 AC1 19 HOH F . ? HOH A 695 . ? 1_555 ? 19 AC1 19 HOH F . ? HOH A 696 . ? 1_555 ? 20 AC2 10 TYR A 222 ? TYR A 438 . ? 1_555 ? 21 AC2 10 TYR A 222 ? TYR A 438 . ? 7_465 ? 22 AC2 10 LEU A 240 ? LEU A 456 . ? 7_465 ? 23 AC2 10 LEU A 240 ? LEU A 456 . ? 1_555 ? 24 AC2 10 GLN A 241 ? GLN A 457 . ? 7_465 ? 25 AC2 10 GLN A 241 ? GLN A 457 . ? 1_555 ? 26 AC2 10 HOH F . ? HOH A 690 . ? 1_555 ? 27 AC2 10 HOH F . ? HOH A 690 . ? 7_465 ? 28 AC2 10 HOH F . ? HOH A 708 . ? 1_555 ? 29 AC2 10 HOH F . ? HOH A 708 . ? 7_465 ? 30 AC3 4 THR A 56 ? THR A 272 . ? 1_555 ? 31 AC3 4 SER A 59 ? SER A 275 . ? 1_555 ? 32 AC3 4 ASP A 93 ? ASP A 309 . ? 1_555 ? 33 AC3 4 HOH F . ? HOH A 711 . ? 1_555 ? # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id VAL _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 285 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 66.87 _pdbx_validate_torsion.psi -49.85 # loop_ _pdbx_SG_project.project_name _pdbx_SG_project.full_name_of_center _pdbx_SG_project.initial_of_center _pdbx_SG_project.id PSI:Biology 'Joint Center for Structural Genomics' JCSG 1 PSI:Biology 'Partnership for Stem Cell Biology' STEMCELL 2 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A ACT 502 ? D ACT . 2 1 A ACT 502 ? D ACT . 3 1 A HOH 690 ? F HOH . # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined -19.7727 27.9725 -3.3137 0.5098 0.3330 0.4013 -0.1390 -0.0396 -0.0695 2.5078 1.9678 2.0788 -0.9335 0.2123 -0.6114 0.0989 -0.0720 0.0000 0.1923 -0.2287 0.1222 0.0035 0.3481 0.0422 'X-RAY DIFFRACTION' 2 ? refined -35.9468 18.6027 -8.7738 0.6688 0.6082 1.5518 -0.6059 -0.3633 -0.0759 0.1430 0.0529 0.0225 0.0950 -0.0408 -0.0423 0.1380 0.0659 0.1958 0.2865 -0.3304 0.2841 -0.1263 0.1989 0.0269 'X-RAY DIFFRACTION' 3 ? refined -23.5250 44.9193 -11.8720 0.8711 0.5094 0.6006 -0.0814 -0.0347 0.0451 0.0609 0.0351 0.0385 0.0037 0.0605 0.0288 -0.3837 0.0559 0.0000 0.2309 0.5191 0.6417 0.0932 -1.2718 -0.1854 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 218 A 461 'chain A and (resseq 218:461)' ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 B 141 B 152 'chain B and (resseq 141:152)' ? ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 501 A 501 'chain A and (resseq 501:501)' ? ? ? ? ? # _phasing.method MR # _pdbx_entry_details.compound_details ? _pdbx_entry_details.sequence_details ;SF-1 (UNIPROT Q13285, NR5A1_HUMAN, STF1_HUMAN) LIGAND BINDING DOMAIN (LBD) WAS EXPRESSED WITH AN N-TERMINAL PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY AMINO ACID RESIDUES 218-461 OF THE TARGET SEQUENCE. RESIDUES C247 AND C412 IN THIS SF-1 CONSTRUCT WERE MUTATED TO S247 AND S412. PEPTIDE CORRESPONDING TO THE PGC-1ALPHA (PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA CO-ACTIVATOR-1ALPHA) RESIDUES 139-EEPSLLKKLLLAPA-152 WAS CO-CRYSTALLIZED WITH THE SF-1 LBD ; _pdbx_entry_details.entry_id 4QJR _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 B GLU 139 ? B GLU 1 3 1 Y 1 B GLU 140 ? B GLU 2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ACT C C N N 1 ACT O O N N 2 ACT OXT O N N 3 ACT CH3 C N N 4 ACT H1 H N N 5 ACT H2 H N N 6 ACT H3 H N N 7 ALA N N N N 8 ALA CA C N S 9 ALA C C N N 10 ALA O O N N 11 ALA CB C N N 12 ALA OXT O N N 13 ALA H H N N 14 ALA H2 H N N 15 ALA HA H N N 16 ALA HB1 H N N 17 ALA HB2 H N N 18 ALA HB3 H N N 19 ALA HXT H N N 20 ARG N N N N 21 ARG CA C N S 22 ARG C C N N 23 ARG O O N N 24 ARG CB C N N 25 ARG CG C N N 26 ARG CD C N N 27 ARG NE N N N 28 ARG CZ C N N 29 ARG NH1 N N N 30 ARG NH2 N N N 31 ARG OXT O N N 32 ARG H H N N 33 ARG H2 H N N 34 ARG HA H N N 35 ARG HB2 H N N 36 ARG HB3 H N N 37 ARG HG2 H N N 38 ARG HG3 H N N 39 ARG HD2 H N N 40 ARG HD3 H N N 41 ARG HE H N N 42 ARG HH11 H N N 43 ARG HH12 H N N 44 ARG HH21 H N N 45 ARG HH22 H N N 46 ARG HXT H N N 47 ASN N N N N 48 ASN CA C N S 49 ASN C C N N 50 ASN O O N N 51 ASN CB C N N 52 ASN CG C N N 53 ASN OD1 O N N 54 ASN ND2 N N N 55 ASN OXT O N N 56 ASN H H N N 57 ASN H2 H N N 58 ASN HA H N N 59 ASN HB2 H N N 60 ASN HB3 H N N 61 ASN HD21 H N N 62 ASN HD22 H N N 63 ASN HXT H N N 64 ASP N N N N 65 ASP CA C N S 66 ASP C C N N 67 ASP O O N N 68 ASP CB C N N 69 ASP CG C N N 70 ASP OD1 O N N 71 ASP OD2 O N N 72 ASP OXT O N N 73 ASP H H N N 74 ASP H2 H N N 75 ASP HA H N N 76 ASP HB2 H N N 77 ASP HB3 H N N 78 ASP HD2 H N N 79 ASP HXT H N N 80 CYS N N N N 81 CYS CA C N R 82 CYS C C N N 83 CYS O O N N 84 CYS CB C N N 85 CYS SG S N N 86 CYS OXT O N N 87 CYS H H N N 88 CYS H2 H N N 89 CYS HA H N N 90 CYS HB2 H N N 91 CYS HB3 H N N 92 CYS HG H N N 93 CYS HXT H N N 94 GLN N N N N 95 GLN CA C N S 96 GLN C C N N 97 GLN O O N N 98 GLN CB C N N 99 GLN CG C N N 100 GLN CD C N N 101 GLN OE1 O N N 102 GLN NE2 N N N 103 GLN OXT O N N 104 GLN H H N N 105 GLN H2 H N N 106 GLN HA H N N 107 GLN HB2 H N N 108 GLN HB3 H N N 109 GLN HG2 H N N 110 GLN HG3 H N N 111 GLN HE21 H N N 112 GLN HE22 H N N 113 GLN HXT H N N 114 GLU N N N N 115 GLU CA C N S 116 GLU C C N N 117 GLU O O N N 118 GLU CB C N N 119 GLU CG C N N 120 GLU CD C N N 121 GLU OE1 O N N 122 GLU OE2 O N N 123 GLU OXT O N N 124 GLU H H N N 125 GLU H2 H N N 126 GLU HA H N N 127 GLU HB2 H N N 128 GLU HB3 H N N 129 GLU HG2 H N N 130 GLU HG3 H N N 131 GLU HE2 H N N 132 GLU HXT H N N 133 GLY N N N N 134 GLY CA C N N 135 GLY C C N N 136 GLY O O N N 137 GLY OXT O N N 138 GLY H H N N 139 GLY H2 H N N 140 GLY HA2 H N N 141 GLY HA3 H N N 142 GLY HXT H N N 143 HIS N N N N 144 HIS CA C N S 145 HIS C C N N 146 HIS O O N N 147 HIS CB C N N 148 HIS CG C Y N 149 HIS ND1 N Y N 150 HIS CD2 C Y N 151 HIS CE1 C Y N 152 HIS NE2 N Y N 153 HIS OXT O N N 154 HIS H H N N 155 HIS H2 H N N 156 HIS HA H N N 157 HIS HB2 H N N 158 HIS HB3 H N N 159 HIS HD1 H N N 160 HIS HD2 H N N 161 HIS HE1 H N N 162 HIS HE2 H N N 163 HIS HXT H N N 164 HOH O O N N 165 HOH H1 H N N 166 HOH H2 H N N 167 ILE N N N N 168 ILE CA C N S 169 ILE C C N N 170 ILE O O N N 171 ILE CB C N S 172 ILE CG1 C N N 173 ILE CG2 C N N 174 ILE CD1 C N N 175 ILE OXT O N N 176 ILE H H N N 177 ILE H2 H N N 178 ILE HA H N N 179 ILE HB H N N 180 ILE HG12 H N N 181 ILE HG13 H N N 182 ILE HG21 H N N 183 ILE HG22 H N N 184 ILE HG23 H N N 185 ILE HD11 H N N 186 ILE HD12 H N N 187 ILE HD13 H N N 188 ILE HXT H N N 189 LEU N N N N 190 LEU CA C N S 191 LEU C C N N 192 LEU O O N N 193 LEU CB C N N 194 LEU CG C N N 195 LEU CD1 C N N 196 LEU CD2 C N N 197 LEU OXT O N N 198 LEU H H N N 199 LEU H2 H N N 200 LEU HA H N N 201 LEU HB2 H N N 202 LEU HB3 H N N 203 LEU HG H N N 204 LEU HD11 H N N 205 LEU HD12 H N N 206 LEU HD13 H N N 207 LEU HD21 H N N 208 LEU HD22 H N N 209 LEU HD23 H N N 210 LEU HXT H N N 211 LYS N N N N 212 LYS CA C N S 213 LYS C C N N 214 LYS O O N N 215 LYS CB C N N 216 LYS CG C N N 217 LYS CD C N N 218 LYS CE C N N 219 LYS NZ N N N 220 LYS OXT O N N 221 LYS H H N N 222 LYS H2 H N N 223 LYS HA H N N 224 LYS HB2 H N N 225 LYS HB3 H N N 226 LYS HG2 H N N 227 LYS HG3 H N N 228 LYS HD2 H N N 229 LYS HD3 H N N 230 LYS HE2 H N N 231 LYS HE3 H N N 232 LYS HZ1 H N N 233 LYS HZ2 H N N 234 LYS HZ3 H N N 235 LYS HXT H N N 236 MET N N N N 237 MET CA C N S 238 MET C C N N 239 MET O O N N 240 MET CB C N N 241 MET CG C N N 242 MET SD S N N 243 MET CE C N N 244 MET OXT O N N 245 MET H H N N 246 MET H2 H N N 247 MET HA H N N 248 MET HB2 H N N 249 MET HB3 H N N 250 MET HG2 H N N 251 MET HG3 H N N 252 MET HE1 H N N 253 MET HE2 H N N 254 MET HE3 H N N 255 MET HXT H N N 256 PHE N N N N 257 PHE CA C N S 258 PHE C C N N 259 PHE O O N N 260 PHE CB C N N 261 PHE CG C Y N 262 PHE CD1 C Y N 263 PHE CD2 C Y N 264 PHE CE1 C Y N 265 PHE CE2 C Y N 266 PHE CZ C Y N 267 PHE OXT O N N 268 PHE H H N N 269 PHE H2 H N N 270 PHE HA H N N 271 PHE HB2 H N N 272 PHE HB3 H N N 273 PHE HD1 H N N 274 PHE HD2 H N N 275 PHE HE1 H N N 276 PHE HE2 H N N 277 PHE HZ H N N 278 PHE HXT H N N 279 PIZ CBG C N N 280 PIZ CBF C N N 281 PIZ CBE C N N 282 PIZ CBD C N N 283 PIZ CBC C N N 284 PIZ CBB C N N 285 PIZ CBA C N N 286 PIZ CB9 C N N 287 PIZ CB8 C N N 288 PIZ CB7 C N N 289 PIZ CB6 C N N 290 PIZ CB5 C N N 291 PIZ CB4 C N N 292 PIZ CB3 C N N 293 PIZ CB2 C N N 294 PIZ CB1 C N N 295 PIZ OB2 O N N 296 PIZ OB1 O N N 297 PIZ C7 C N S 298 PIZ C8 C N N 299 PIZ O13 O N N 300 PIZ P1 P N N 301 PIZ O12 O N N 302 PIZ O11 O N N 303 PIZ O1 O N N 304 PIZ C1 C N N 305 PIZ C2 C N S 306 PIZ O2 O N N 307 PIZ C3 C N S 308 PIZ O3 O N N 309 PIZ P3 P N N 310 PIZ O31 O N N 311 PIZ O32 O N N 312 PIZ O33 O N N 313 PIZ C4 C N N 314 PIZ O4 O N N 315 PIZ P4 P N N 316 PIZ O41 O N N 317 PIZ O42 O N N 318 PIZ O43 O N N 319 PIZ C5 C N R 320 PIZ O5 O N N 321 PIZ P5 P N N 322 PIZ O51 O N N 323 PIZ O52 O N N 324 PIZ O53 O N N 325 PIZ C6 C N S 326 PIZ O6 O N N 327 PIZ C9 C N N 328 PIZ OA1 O N N 329 PIZ CA1 C N N 330 PIZ OA2 O N N 331 PIZ CA2 C N N 332 PIZ CA3 C N N 333 PIZ CA4 C N N 334 PIZ CA5 C N N 335 PIZ CA6 C N N 336 PIZ CA7 C N N 337 PIZ CA8 C N N 338 PIZ CA9 C N N 339 PIZ CAA C N N 340 PIZ CAB C N N 341 PIZ CAC C N N 342 PIZ CAD C N N 343 PIZ CAE C N N 344 PIZ CAF C N N 345 PIZ CAG C N N 346 PIZ H1 H N N 347 PIZ H2 H N N 348 PIZ H3 H N N 349 PIZ H4 H N N 350 PIZ H5 H N N 351 PIZ H6 H N N 352 PIZ H7 H N N 353 PIZ H8 H N N 354 PIZ H9 H N N 355 PIZ H10 H N N 356 PIZ H11 H N N 357 PIZ H12 H N N 358 PIZ H13 H N N 359 PIZ H14 H N N 360 PIZ H15 H N N 361 PIZ H16 H N N 362 PIZ H17 H N N 363 PIZ H18 H N N 364 PIZ H19 H N N 365 PIZ H20 H N N 366 PIZ H21 H N N 367 PIZ H22 H N N 368 PIZ H23 H N N 369 PIZ H24 H N N 370 PIZ H25 H N N 371 PIZ H26 H N N 372 PIZ H27 H N N 373 PIZ H28 H N N 374 PIZ H29 H N N 375 PIZ H30 H N N 376 PIZ H31 H N N 377 PIZ H32 H N N 378 PIZ H33 H N N 379 PIZ H34 H N N 380 PIZ H35 H N N 381 PIZ H36 H N N 382 PIZ H37 H N N 383 PIZ H38 H N N 384 PIZ H39 H N N 385 PIZ H40 H N N 386 PIZ H41 H N N 387 PIZ H42 H N N 388 PIZ H43 H N N 389 PIZ H44 H N N 390 PIZ H45 H N N 391 PIZ H46 H N N 392 PIZ H47 H N N 393 PIZ H48 H N N 394 PIZ H49 H N N 395 PIZ H50 H N N 396 PIZ H51 H N N 397 PIZ H52 H N N 398 PIZ H53 H N N 399 PIZ H54 H N N 400 PIZ H55 H N N 401 PIZ H56 H N N 402 PIZ H57 H N N 403 PIZ H58 H N N 404 PIZ H59 H N N 405 PIZ H60 H N N 406 PIZ H61 H N N 407 PIZ H62 H N N 408 PIZ H63 H N N 409 PIZ H64 H N N 410 PIZ H65 H N N 411 PIZ H66 H N N 412 PIZ H67 H N N 413 PIZ H68 H N N 414 PIZ H69 H N N 415 PIZ H70 H N N 416 PIZ H71 H N N 417 PIZ H72 H N N 418 PIZ H73 H N N 419 PIZ H74 H N N 420 PIZ H75 H N N 421 PIZ H76 H N N 422 PIZ H77 H N N 423 PIZ H78 H N N 424 PIZ H79 H N N 425 PIZ H80 H N N 426 PIZ H81 H N N 427 PIZ H82 H N N 428 PRO N N N N 429 PRO CA C N S 430 PRO C C N N 431 PRO O O N N 432 PRO CB C N N 433 PRO CG C N N 434 PRO CD C N N 435 PRO OXT O N N 436 PRO H H N N 437 PRO HA H N N 438 PRO HB2 H N N 439 PRO HB3 H N N 440 PRO HG2 H N N 441 PRO HG3 H N N 442 PRO HD2 H N N 443 PRO HD3 H N N 444 PRO HXT H N N 445 SER N N N N 446 SER CA C N S 447 SER C C N N 448 SER O O N N 449 SER CB C N N 450 SER OG O N N 451 SER OXT O N N 452 SER H H N N 453 SER H2 H N N 454 SER HA H N N 455 SER HB2 H N N 456 SER HB3 H N N 457 SER HG H N N 458 SER HXT H N N 459 THR N N N N 460 THR CA C N S 461 THR C C N N 462 THR O O N N 463 THR CB C N R 464 THR OG1 O N N 465 THR CG2 C N N 466 THR OXT O N N 467 THR H H N N 468 THR H2 H N N 469 THR HA H N N 470 THR HB H N N 471 THR HG1 H N N 472 THR HG21 H N N 473 THR HG22 H N N 474 THR HG23 H N N 475 THR HXT H N N 476 TRP N N N N 477 TRP CA C N S 478 TRP C C N N 479 TRP O O N N 480 TRP CB C N N 481 TRP CG C Y N 482 TRP CD1 C Y N 483 TRP CD2 C Y N 484 TRP NE1 N Y N 485 TRP CE2 C Y N 486 TRP CE3 C Y N 487 TRP CZ2 C Y N 488 TRP CZ3 C Y N 489 TRP CH2 C Y N 490 TRP OXT O N N 491 TRP H H N N 492 TRP H2 H N N 493 TRP HA H N N 494 TRP HB2 H N N 495 TRP HB3 H N N 496 TRP HD1 H N N 497 TRP HE1 H N N 498 TRP HE3 H N N 499 TRP HZ2 H N N 500 TRP HZ3 H N N 501 TRP HH2 H N N 502 TRP HXT H N N 503 TYR N N N N 504 TYR CA C N S 505 TYR C C N N 506 TYR O O N N 507 TYR CB C N N 508 TYR CG C Y N 509 TYR CD1 C Y N 510 TYR CD2 C Y N 511 TYR CE1 C Y N 512 TYR CE2 C Y N 513 TYR CZ C Y N 514 TYR OH O N N 515 TYR OXT O N N 516 TYR H H N N 517 TYR H2 H N N 518 TYR HA H N N 519 TYR HB2 H N N 520 TYR HB3 H N N 521 TYR HD1 H N N 522 TYR HD2 H N N 523 TYR HE1 H N N 524 TYR HE2 H N N 525 TYR HH H N N 526 TYR HXT H N N 527 VAL N N N N 528 VAL CA C N S 529 VAL C C N N 530 VAL O O N N 531 VAL CB C N N 532 VAL CG1 C N N 533 VAL CG2 C N N 534 VAL OXT O N N 535 VAL H H N N 536 VAL H2 H N N 537 VAL HA H N N 538 VAL HB H N N 539 VAL HG11 H N N 540 VAL HG12 H N N 541 VAL HG13 H N N 542 VAL HG21 H N N 543 VAL HG22 H N N 544 VAL HG23 H N N 545 VAL HXT H N N 546 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ACT C O doub N N 1 ACT C OXT sing N N 2 ACT C CH3 sing N N 3 ACT CH3 H1 sing N N 4 ACT CH3 H2 sing N N 5 ACT CH3 H3 sing N N 6 ALA N CA sing N N 7 ALA N H sing N N 8 ALA N H2 sing N N 9 ALA CA C sing N N 10 ALA CA CB sing N N 11 ALA CA HA sing N N 12 ALA C O doub N N 13 ALA C OXT sing N N 14 ALA CB HB1 sing N N 15 ALA CB HB2 sing N N 16 ALA CB HB3 sing N N 17 ALA OXT HXT sing N N 18 ARG N CA sing N N 19 ARG N H sing N N 20 ARG N H2 sing N N 21 ARG CA C sing N N 22 ARG CA CB sing N N 23 ARG CA HA sing N N 24 ARG C O doub N N 25 ARG C OXT sing N N 26 ARG CB CG sing N N 27 ARG CB HB2 sing N N 28 ARG CB HB3 sing N N 29 ARG CG CD sing N N 30 ARG CG HG2 sing N N 31 ARG CG HG3 sing N N 32 ARG CD NE sing N N 33 ARG CD HD2 sing N N 34 ARG CD HD3 sing N N 35 ARG NE CZ sing N N 36 ARG NE HE sing N N 37 ARG CZ NH1 sing N N 38 ARG CZ NH2 doub N N 39 ARG NH1 HH11 sing N N 40 ARG NH1 HH12 sing N N 41 ARG NH2 HH21 sing N N 42 ARG NH2 HH22 sing N N 43 ARG OXT HXT sing N N 44 ASN N CA sing N N 45 ASN N H sing N N 46 ASN N H2 sing N N 47 ASN CA C sing N N 48 ASN CA CB sing N N 49 ASN CA HA sing N N 50 ASN C O doub N N 51 ASN C OXT sing N N 52 ASN CB CG sing N N 53 ASN CB HB2 sing N N 54 ASN CB HB3 sing N N 55 ASN CG OD1 doub N N 56 ASN CG ND2 sing N N 57 ASN ND2 HD21 sing N N 58 ASN ND2 HD22 sing N N 59 ASN OXT HXT sing N N 60 ASP N CA sing N N 61 ASP N H sing N N 62 ASP N H2 sing N N 63 ASP CA C sing N N 64 ASP CA CB sing N N 65 ASP CA HA sing N N 66 ASP C O doub N N 67 ASP C OXT sing N N 68 ASP CB CG sing N N 69 ASP CB HB2 sing N N 70 ASP CB HB3 sing N N 71 ASP CG OD1 doub N N 72 ASP CG OD2 sing N N 73 ASP OD2 HD2 sing N N 74 ASP OXT HXT sing N N 75 CYS N CA sing N N 76 CYS N H sing N N 77 CYS N H2 sing N N 78 CYS CA C sing N N 79 CYS CA CB sing N N 80 CYS CA HA sing N N 81 CYS C O doub N N 82 CYS C OXT sing N N 83 CYS CB SG sing N N 84 CYS CB HB2 sing N N 85 CYS CB HB3 sing N N 86 CYS SG HG sing N N 87 CYS OXT HXT sing N N 88 GLN N CA sing N N 89 GLN N H sing N N 90 GLN N H2 sing N N 91 GLN CA C sing N N 92 GLN CA CB sing N N 93 GLN CA HA sing N N 94 GLN C O doub N N 95 GLN C OXT sing N N 96 GLN CB CG sing N N 97 GLN CB HB2 sing N N 98 GLN CB HB3 sing N N 99 GLN CG CD sing N N 100 GLN CG HG2 sing N N 101 GLN CG HG3 sing N N 102 GLN CD OE1 doub N N 103 GLN CD NE2 sing N N 104 GLN NE2 HE21 sing N N 105 GLN NE2 HE22 sing N N 106 GLN OXT HXT sing N N 107 GLU N CA sing N N 108 GLU N H sing N N 109 GLU N H2 sing N N 110 GLU CA C sing N N 111 GLU CA CB sing N N 112 GLU CA HA sing N N 113 GLU C O doub N N 114 GLU C OXT sing N N 115 GLU CB CG sing N N 116 GLU CB HB2 sing N N 117 GLU CB HB3 sing N N 118 GLU CG CD sing N N 119 GLU CG HG2 sing N N 120 GLU CG HG3 sing N N 121 GLU CD OE1 doub N N 122 GLU CD OE2 sing N N 123 GLU OE2 HE2 sing N N 124 GLU OXT HXT sing N N 125 GLY N CA sing N N 126 GLY N H sing N N 127 GLY N H2 sing N N 128 GLY CA C sing N N 129 GLY CA HA2 sing N N 130 GLY CA HA3 sing N N 131 GLY C O doub N N 132 GLY C OXT sing N N 133 GLY OXT HXT sing N N 134 HIS N CA sing N N 135 HIS N H sing N N 136 HIS N H2 sing N N 137 HIS CA C sing N N 138 HIS CA CB sing N N 139 HIS CA HA sing N N 140 HIS C O doub N N 141 HIS C OXT sing N N 142 HIS CB CG sing N N 143 HIS CB HB2 sing N N 144 HIS CB HB3 sing N N 145 HIS CG ND1 sing Y N 146 HIS CG CD2 doub Y N 147 HIS ND1 CE1 doub Y N 148 HIS ND1 HD1 sing N N 149 HIS CD2 NE2 sing Y N 150 HIS CD2 HD2 sing N N 151 HIS CE1 NE2 sing Y N 152 HIS CE1 HE1 sing N N 153 HIS NE2 HE2 sing N N 154 HIS OXT HXT sing N N 155 HOH O H1 sing N N 156 HOH O H2 sing N N 157 ILE N CA sing N N 158 ILE N H sing N N 159 ILE N H2 sing N N 160 ILE CA C sing N N 161 ILE CA CB sing N N 162 ILE CA HA sing N N 163 ILE C O doub N N 164 ILE C OXT sing N N 165 ILE CB CG1 sing N N 166 ILE CB CG2 sing N N 167 ILE CB HB sing N N 168 ILE CG1 CD1 sing N N 169 ILE CG1 HG12 sing N N 170 ILE CG1 HG13 sing N N 171 ILE CG2 HG21 sing N N 172 ILE CG2 HG22 sing N N 173 ILE CG2 HG23 sing N N 174 ILE CD1 HD11 sing N N 175 ILE CD1 HD12 sing N N 176 ILE CD1 HD13 sing N N 177 ILE OXT HXT sing N N 178 LEU N CA sing N N 179 LEU N H sing N N 180 LEU N H2 sing N N 181 LEU CA C sing N N 182 LEU CA CB sing N N 183 LEU CA HA sing N N 184 LEU C O doub N N 185 LEU C OXT sing N N 186 LEU CB CG sing N N 187 LEU CB HB2 sing N N 188 LEU CB HB3 sing N N 189 LEU CG CD1 sing N N 190 LEU CG CD2 sing N N 191 LEU CG HG sing N N 192 LEU CD1 HD11 sing N N 193 LEU CD1 HD12 sing N N 194 LEU CD1 HD13 sing N N 195 LEU CD2 HD21 sing N N 196 LEU CD2 HD22 sing N N 197 LEU CD2 HD23 sing N N 198 LEU OXT HXT sing N N 199 LYS N CA sing N N 200 LYS N H sing N N 201 LYS N H2 sing N N 202 LYS CA C sing N N 203 LYS CA CB sing N N 204 LYS CA HA sing N N 205 LYS C O doub N N 206 LYS C OXT sing N N 207 LYS CB CG sing N N 208 LYS CB HB2 sing N N 209 LYS CB HB3 sing N N 210 LYS CG CD sing N N 211 LYS CG HG2 sing N N 212 LYS CG HG3 sing N N 213 LYS CD CE sing N N 214 LYS CD HD2 sing N N 215 LYS CD HD3 sing N N 216 LYS CE NZ sing N N 217 LYS CE HE2 sing N N 218 LYS CE HE3 sing N N 219 LYS NZ HZ1 sing N N 220 LYS NZ HZ2 sing N N 221 LYS NZ HZ3 sing N N 222 LYS OXT HXT sing N N 223 MET N CA sing N N 224 MET N H sing N N 225 MET N H2 sing N N 226 MET CA C sing N N 227 MET CA CB sing N N 228 MET CA HA sing N N 229 MET C O doub N N 230 MET C OXT sing N N 231 MET CB CG sing N N 232 MET CB HB2 sing N N 233 MET CB HB3 sing N N 234 MET CG SD sing N N 235 MET CG HG2 sing N N 236 MET CG HG3 sing N N 237 MET SD CE sing N N 238 MET CE HE1 sing N N 239 MET CE HE2 sing N N 240 MET CE HE3 sing N N 241 MET OXT HXT sing N N 242 PHE N CA sing N N 243 PHE N H sing N N 244 PHE N H2 sing N N 245 PHE CA C sing N N 246 PHE CA CB sing N N 247 PHE CA HA sing N N 248 PHE C O doub N N 249 PHE C OXT sing N N 250 PHE CB CG sing N N 251 PHE CB HB2 sing N N 252 PHE CB HB3 sing N N 253 PHE CG CD1 doub Y N 254 PHE CG CD2 sing Y N 255 PHE CD1 CE1 sing Y N 256 PHE CD1 HD1 sing N N 257 PHE CD2 CE2 doub Y N 258 PHE CD2 HD2 sing N N 259 PHE CE1 CZ doub Y N 260 PHE CE1 HE1 sing N N 261 PHE CE2 CZ sing Y N 262 PHE CE2 HE2 sing N N 263 PHE CZ HZ sing N N 264 PHE OXT HXT sing N N 265 PIZ O53 P5 doub N N 266 PIZ O51 P5 sing N N 267 PIZ P5 O52 sing N N 268 PIZ P5 O5 sing N N 269 PIZ CA2 CA3 sing N N 270 PIZ CA2 CA1 sing N N 271 PIZ OA1 CA1 sing N N 272 PIZ OA1 C9 sing N N 273 PIZ CA3 CA4 sing N N 274 PIZ CA1 OA2 doub N N 275 PIZ OB2 CB1 doub N N 276 PIZ C9 C7 sing N N 277 PIZ OB1 CB1 sing N N 278 PIZ OB1 C7 sing N N 279 PIZ O6 C6 sing N N 280 PIZ O5 C5 sing N N 281 PIZ CB1 CB2 sing N N 282 PIZ CA4 CA5 sing N N 283 PIZ C8 C7 sing N N 284 PIZ C8 O13 sing N N 285 PIZ CA5 CA6 sing N N 286 PIZ CB2 CB3 sing N N 287 PIZ C5 C6 sing N N 288 PIZ C5 C4 sing N N 289 PIZ C6 C1 sing N N 290 PIZ O13 P1 sing N N 291 PIZ O43 P4 doub N N 292 PIZ CB3 CB4 sing N N 293 PIZ CB4 CB5 sing N N 294 PIZ CA6 CA7 sing N N 295 PIZ CA7 CA8 sing N N 296 PIZ O42 P4 sing N N 297 PIZ CB5 CB6 sing N N 298 PIZ O4 P4 sing N N 299 PIZ O4 C4 sing N N 300 PIZ P4 O41 sing N N 301 PIZ C4 C3 sing N N 302 PIZ C1 O1 sing N N 303 PIZ C1 C2 sing N N 304 PIZ O1 P1 sing N N 305 PIZ P1 O12 doub N N 306 PIZ P1 O11 sing N N 307 PIZ CB6 CB7 sing N N 308 PIZ CA9 CA8 sing N N 309 PIZ CA9 CAA sing N N 310 PIZ C3 C2 sing N N 311 PIZ C3 O3 sing N N 312 PIZ C2 O2 sing N N 313 PIZ CB7 CB8 sing N N 314 PIZ CAA CAB sing N N 315 PIZ CAB CAC sing N N 316 PIZ O33 P3 doub N N 317 PIZ O3 P3 sing N N 318 PIZ CB8 CB9 sing N N 319 PIZ P3 O32 sing N N 320 PIZ P3 O31 sing N N 321 PIZ CAC CAD sing N N 322 PIZ CB9 CBA sing N N 323 PIZ CAD CAE sing N N 324 PIZ CBB CBC sing N N 325 PIZ CBB CBA sing N N 326 PIZ CBC CBD sing N N 327 PIZ CAE CAF sing N N 328 PIZ CBE CBD sing N N 329 PIZ CBE CBF sing N N 330 PIZ CAF CAG sing N N 331 PIZ CBF CBG sing N N 332 PIZ CBG H1 sing N N 333 PIZ CBG H2 sing N N 334 PIZ CBG H3 sing N N 335 PIZ CBF H4 sing N N 336 PIZ CBF H5 sing N N 337 PIZ CBE H6 sing N N 338 PIZ CBE H7 sing N N 339 PIZ CBD H8 sing N N 340 PIZ CBD H9 sing N N 341 PIZ CBC H10 sing N N 342 PIZ CBC H11 sing N N 343 PIZ CBB H12 sing N N 344 PIZ CBB H13 sing N N 345 PIZ CBA H14 sing N N 346 PIZ CBA H15 sing N N 347 PIZ CB9 H16 sing N N 348 PIZ CB9 H17 sing N N 349 PIZ CB8 H18 sing N N 350 PIZ CB8 H19 sing N N 351 PIZ CB7 H20 sing N N 352 PIZ CB7 H21 sing N N 353 PIZ CB6 H22 sing N N 354 PIZ CB6 H23 sing N N 355 PIZ CB5 H24 sing N N 356 PIZ CB5 H25 sing N N 357 PIZ CB4 H26 sing N N 358 PIZ CB4 H27 sing N N 359 PIZ CB3 H28 sing N N 360 PIZ CB3 H29 sing N N 361 PIZ CB2 H30 sing N N 362 PIZ CB2 H31 sing N N 363 PIZ C7 H32 sing N N 364 PIZ C8 H33 sing N N 365 PIZ C8 H34 sing N N 366 PIZ O11 H35 sing N N 367 PIZ C1 H36 sing N N 368 PIZ C2 H37 sing N N 369 PIZ O2 H38 sing N N 370 PIZ C3 H39 sing N N 371 PIZ O31 H40 sing N N 372 PIZ O32 H41 sing N N 373 PIZ C4 H42 sing N N 374 PIZ O41 H43 sing N N 375 PIZ O42 H44 sing N N 376 PIZ C5 H45 sing N N 377 PIZ O51 H46 sing N N 378 PIZ O52 H47 sing N N 379 PIZ C6 H48 sing N N 380 PIZ O6 H49 sing N N 381 PIZ C9 H50 sing N N 382 PIZ C9 H51 sing N N 383 PIZ CA2 H52 sing N N 384 PIZ CA2 H53 sing N N 385 PIZ CA3 H54 sing N N 386 PIZ CA3 H55 sing N N 387 PIZ CA4 H56 sing N N 388 PIZ CA4 H57 sing N N 389 PIZ CA5 H58 sing N N 390 PIZ CA5 H59 sing N N 391 PIZ CA6 H60 sing N N 392 PIZ CA6 H61 sing N N 393 PIZ CA7 H62 sing N N 394 PIZ CA7 H63 sing N N 395 PIZ CA8 H64 sing N N 396 PIZ CA8 H65 sing N N 397 PIZ CA9 H66 sing N N 398 PIZ CA9 H67 sing N N 399 PIZ CAA H68 sing N N 400 PIZ CAA H69 sing N N 401 PIZ CAB H70 sing N N 402 PIZ CAB H71 sing N N 403 PIZ CAC H72 sing N N 404 PIZ CAC H73 sing N N 405 PIZ CAD H74 sing N N 406 PIZ CAD H75 sing N N 407 PIZ CAE H76 sing N N 408 PIZ CAE H77 sing N N 409 PIZ CAF H78 sing N N 410 PIZ CAF H79 sing N N 411 PIZ CAG H80 sing N N 412 PIZ CAG H81 sing N N 413 PIZ CAG H82 sing N N 414 PRO N CA sing N N 415 PRO N CD sing N N 416 PRO N H sing N N 417 PRO CA C sing N N 418 PRO CA CB sing N N 419 PRO CA HA sing N N 420 PRO C O doub N N 421 PRO C OXT sing N N 422 PRO CB CG sing N N 423 PRO CB HB2 sing N N 424 PRO CB HB3 sing N N 425 PRO CG CD sing N N 426 PRO CG HG2 sing N N 427 PRO CG HG3 sing N N 428 PRO CD HD2 sing N N 429 PRO CD HD3 sing N N 430 PRO OXT HXT sing N N 431 SER N CA sing N N 432 SER N H sing N N 433 SER N H2 sing N N 434 SER CA C sing N N 435 SER CA CB sing N N 436 SER CA HA sing N N 437 SER C O doub N N 438 SER C OXT sing N N 439 SER CB OG sing N N 440 SER CB HB2 sing N N 441 SER CB HB3 sing N N 442 SER OG HG sing N N 443 SER OXT HXT sing N N 444 THR N CA sing N N 445 THR N H sing N N 446 THR N H2 sing N N 447 THR CA C sing N N 448 THR CA CB sing N N 449 THR CA HA sing N N 450 THR C O doub N N 451 THR C OXT sing N N 452 THR CB OG1 sing N N 453 THR CB CG2 sing N N 454 THR CB HB sing N N 455 THR OG1 HG1 sing N N 456 THR CG2 HG21 sing N N 457 THR CG2 HG22 sing N N 458 THR CG2 HG23 sing N N 459 THR OXT HXT sing N N 460 TRP N CA sing N N 461 TRP N H sing N N 462 TRP N H2 sing N N 463 TRP CA C sing N N 464 TRP CA CB sing N N 465 TRP CA HA sing N N 466 TRP C O doub N N 467 TRP C OXT sing N N 468 TRP CB CG sing N N 469 TRP CB HB2 sing N N 470 TRP CB HB3 sing N N 471 TRP CG CD1 doub Y N 472 TRP CG CD2 sing Y N 473 TRP CD1 NE1 sing Y N 474 TRP CD1 HD1 sing N N 475 TRP CD2 CE2 doub Y N 476 TRP CD2 CE3 sing Y N 477 TRP NE1 CE2 sing Y N 478 TRP NE1 HE1 sing N N 479 TRP CE2 CZ2 sing Y N 480 TRP CE3 CZ3 doub Y N 481 TRP CE3 HE3 sing N N 482 TRP CZ2 CH2 doub Y N 483 TRP CZ2 HZ2 sing N N 484 TRP CZ3 CH2 sing Y N 485 TRP CZ3 HZ3 sing N N 486 TRP CH2 HH2 sing N N 487 TRP OXT HXT sing N N 488 TYR N CA sing N N 489 TYR N H sing N N 490 TYR N H2 sing N N 491 TYR CA C sing N N 492 TYR CA CB sing N N 493 TYR CA HA sing N N 494 TYR C O doub N N 495 TYR C OXT sing N N 496 TYR CB CG sing N N 497 TYR CB HB2 sing N N 498 TYR CB HB3 sing N N 499 TYR CG CD1 doub Y N 500 TYR CG CD2 sing Y N 501 TYR CD1 CE1 sing Y N 502 TYR CD1 HD1 sing N N 503 TYR CD2 CE2 doub Y N 504 TYR CD2 HD2 sing N N 505 TYR CE1 CZ doub Y N 506 TYR CE1 HE1 sing N N 507 TYR CE2 CZ sing Y N 508 TYR CE2 HE2 sing N N 509 TYR CZ OH sing N N 510 TYR OH HH sing N N 511 TYR OXT HXT sing N N 512 VAL N CA sing N N 513 VAL N H sing N N 514 VAL N H2 sing N N 515 VAL CA C sing N N 516 VAL CA CB sing N N 517 VAL CA HA sing N N 518 VAL C O doub N N 519 VAL C OXT sing N N 520 VAL CB CG1 sing N N 521 VAL CB CG2 sing N N 522 VAL CB HB sing N N 523 VAL CG1 HG11 sing N N 524 VAL CG1 HG12 sing N N 525 VAL CG1 HG13 sing N N 526 VAL CG2 HG21 sing N N 527 VAL CG2 HG22 sing N N 528 VAL CG2 HG23 sing N N 529 VAL OXT HXT sing N N 530 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1YOW _pdbx_initial_refinement_model.details 'PDB entry 1YOW' # _atom_sites.entry_id 4QJR _atom_sites.fract_transf_matrix[1][1] 0.013360 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013360 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007162 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O P S # loop_