data_4RA3 # _entry.id 4RA3 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.398 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4RA3 pdb_00004ra3 10.2210/pdb4ra3/pdb RCSB RCSB087089 ? ? WWPDB D_1000087089 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-09-09 2 'Structure model' 1 1 2015-09-23 3 'Structure model' 1 2 2015-11-04 4 'Structure model' 1 3 2018-03-07 5 'Structure model' 1 4 2023-09-20 6 'Structure model' 1 5 2024-11-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' 7 5 'Structure model' 'Refinement description' 8 6 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' diffrn_source 2 5 'Structure model' chem_comp_atom 3 5 'Structure model' chem_comp_bond 4 5 'Structure model' database_2 5 5 'Structure model' pdbx_initial_refinement_model 6 5 'Structure model' struct_ncs_dom_lim 7 5 'Structure model' struct_ref_seq_dif 8 5 'Structure model' struct_site 9 6 'Structure model' pdbx_entry_details 10 6 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_diffrn_source.pdbx_synchrotron_site' 2 5 'Structure model' '_database_2.pdbx_DOI' 3 5 'Structure model' '_database_2.pdbx_database_accession' 4 5 'Structure model' '_struct_ncs_dom_lim.beg_auth_comp_id' 5 5 'Structure model' '_struct_ncs_dom_lim.beg_label_asym_id' 6 5 'Structure model' '_struct_ncs_dom_lim.beg_label_comp_id' 7 5 'Structure model' '_struct_ncs_dom_lim.beg_label_seq_id' 8 5 'Structure model' '_struct_ncs_dom_lim.end_auth_comp_id' 9 5 'Structure model' '_struct_ncs_dom_lim.end_label_asym_id' 10 5 'Structure model' '_struct_ncs_dom_lim.end_label_comp_id' 11 5 'Structure model' '_struct_ncs_dom_lim.end_label_seq_id' 12 5 'Structure model' '_struct_ref_seq_dif.details' 13 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 14 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 15 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4RA3 _pdbx_database_status.recvd_initial_deposition_date 2014-09-09 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4R9H . unspecified PDB 4RAH . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Halabelian, L.' 1 'Bolognesi, M.' 2 'Ricagno, S.' 3 # _citation.id primary _citation.title 'A covalent homodimer probing early oligomers along amyloid aggregation.' _citation.journal_abbrev 'Sci Rep' _citation.journal_volume 5 _citation.page_first 14651 _citation.page_last 14651 _citation.year 2015 _citation.journal_id_ASTM ? _citation.country UK _citation.journal_id_ISSN 2045-2322 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 26420657 _citation.pdbx_database_id_DOI 10.1038/srep14651 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Halabelian, L.' 1 ? primary 'Relini, A.' 2 ? primary 'Barbiroli, A.' 3 ? primary 'Penco, A.' 4 ? primary 'Bolognesi, M.' 5 ? primary 'Ricagno, S.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Beta-2-microglobulin 11895.422 4 ? S33C 'UNP residues 21-119' ? 2 non-polymer syn '2-[4-(dimethylamino)phenyl]-3,6-dimethyl-1,3-benzothiazol-3-ium' 283.411 5 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPCDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYA CRVNHVTLSQPKIVKWDRDM ; _entity_poly.pdbx_seq_one_letter_code_can ;MIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPCDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYA CRVNHVTLSQPKIVKWDRDM ; _entity_poly.pdbx_strand_id A,B,C,D _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name '2-[4-(dimethylamino)phenyl]-3,6-dimethyl-1,3-benzothiazol-3-ium' _pdbx_entity_nonpoly.comp_id TFX # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ILE n 1 3 GLN n 1 4 ARG n 1 5 THR n 1 6 PRO n 1 7 LYS n 1 8 ILE n 1 9 GLN n 1 10 VAL n 1 11 TYR n 1 12 SER n 1 13 ARG n 1 14 HIS n 1 15 PRO n 1 16 ALA n 1 17 GLU n 1 18 ASN n 1 19 GLY n 1 20 LYS n 1 21 SER n 1 22 ASN n 1 23 PHE n 1 24 LEU n 1 25 ASN n 1 26 CYS n 1 27 TYR n 1 28 VAL n 1 29 SER n 1 30 GLY n 1 31 PHE n 1 32 HIS n 1 33 PRO n 1 34 CYS n 1 35 ASP n 1 36 ILE n 1 37 GLU n 1 38 VAL n 1 39 ASP n 1 40 LEU n 1 41 LEU n 1 42 LYS n 1 43 ASN n 1 44 GLY n 1 45 GLU n 1 46 ARG n 1 47 ILE n 1 48 GLU n 1 49 LYS n 1 50 VAL n 1 51 GLU n 1 52 HIS n 1 53 SER n 1 54 ASP n 1 55 LEU n 1 56 SER n 1 57 PHE n 1 58 SER n 1 59 LYS n 1 60 ASP n 1 61 TRP n 1 62 SER n 1 63 PHE n 1 64 TYR n 1 65 LEU n 1 66 LEU n 1 67 TYR n 1 68 TYR n 1 69 THR n 1 70 GLU n 1 71 PHE n 1 72 THR n 1 73 PRO n 1 74 THR n 1 75 GLU n 1 76 LYS n 1 77 ASP n 1 78 GLU n 1 79 TYR n 1 80 ALA n 1 81 CYS n 1 82 ARG n 1 83 VAL n 1 84 ASN n 1 85 HIS n 1 86 VAL n 1 87 THR n 1 88 LEU n 1 89 SER n 1 90 GLN n 1 91 PRO n 1 92 LYS n 1 93 ILE n 1 94 VAL n 1 95 LYS n 1 96 TRP n 1 97 ASP n 1 98 ARG n 1 99 ASP n 1 100 MET n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'B2M, CDABP0092, HDCMA22P, NM_004048' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET21b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 TFX non-polymer . '2-[4-(dimethylamino)phenyl]-3,6-dimethyl-1,3-benzothiazol-3-ium' 'Thioflavin T' 'C17 H19 N2 S 1' 283.411 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 0 0 MET MET A . n A 1 2 ILE 2 1 1 ILE ILE A . n A 1 3 GLN 3 2 2 GLN GLN A . n A 1 4 ARG 4 3 3 ARG ARG A . n A 1 5 THR 5 4 4 THR THR A . n A 1 6 PRO 6 5 5 PRO PRO A . n A 1 7 LYS 7 6 6 LYS LYS A . n A 1 8 ILE 8 7 7 ILE ILE A . n A 1 9 GLN 9 8 8 GLN GLN A . n A 1 10 VAL 10 9 9 VAL VAL A . n A 1 11 TYR 11 10 10 TYR TYR A . n A 1 12 SER 12 11 11 SER SER A . n A 1 13 ARG 13 12 12 ARG ARG A . n A 1 14 HIS 14 13 13 HIS HIS A . n A 1 15 PRO 15 14 14 PRO PRO A . n A 1 16 ALA 16 15 15 ALA ALA A . n A 1 17 GLU 17 16 16 GLU GLU A . n A 1 18 ASN 18 17 17 ASN ASN A . n A 1 19 GLY 19 18 18 GLY GLY A . n A 1 20 LYS 20 19 19 LYS LYS A . n A 1 21 SER 21 20 20 SER SER A . n A 1 22 ASN 22 21 21 ASN ASN A . n A 1 23 PHE 23 22 22 PHE PHE A . n A 1 24 LEU 24 23 23 LEU LEU A . n A 1 25 ASN 25 24 24 ASN ASN A . n A 1 26 CYS 26 25 25 CYS CYS A . n A 1 27 TYR 27 26 26 TYR TYR A . n A 1 28 VAL 28 27 27 VAL VAL A . n A 1 29 SER 29 28 28 SER SER A . n A 1 30 GLY 30 29 29 GLY GLY A . n A 1 31 PHE 31 30 30 PHE PHE A . n A 1 32 HIS 32 31 31 HIS HIS A . n A 1 33 PRO 33 32 32 PRO PRO A . n A 1 34 CYS 34 33 33 CYS CYS A . n A 1 35 ASP 35 34 34 ASP ASP A . n A 1 36 ILE 36 35 35 ILE ILE A . n A 1 37 GLU 37 36 36 GLU GLU A . n A 1 38 VAL 38 37 37 VAL VAL A . n A 1 39 ASP 39 38 38 ASP ASP A . n A 1 40 LEU 40 39 39 LEU LEU A . n A 1 41 LEU 41 40 40 LEU LEU A . n A 1 42 LYS 42 41 41 LYS LYS A . n A 1 43 ASN 43 42 42 ASN ASN A . n A 1 44 GLY 44 43 43 GLY GLY A . n A 1 45 GLU 45 44 44 GLU GLU A . n A 1 46 ARG 46 45 45 ARG ARG A . n A 1 47 ILE 47 46 46 ILE ILE A . n A 1 48 GLU 48 47 47 GLU GLU A . n A 1 49 LYS 49 48 48 LYS LYS A . n A 1 50 VAL 50 49 49 VAL VAL A . n A 1 51 GLU 51 50 50 GLU GLU A . n A 1 52 HIS 52 51 51 HIS HIS A . n A 1 53 SER 53 52 52 SER SER A . n A 1 54 ASP 54 53 53 ASP ASP A . n A 1 55 LEU 55 54 54 LEU LEU A . n A 1 56 SER 56 55 55 SER SER A . n A 1 57 PHE 57 56 56 PHE PHE A . n A 1 58 SER 58 57 57 SER SER A . n A 1 59 LYS 59 58 58 LYS LYS A . n A 1 60 ASP 60 59 59 ASP ASP A . n A 1 61 TRP 61 60 60 TRP TRP A . n A 1 62 SER 62 61 61 SER SER A . n A 1 63 PHE 63 62 62 PHE PHE A . n A 1 64 TYR 64 63 63 TYR TYR A . n A 1 65 LEU 65 64 64 LEU LEU A . n A 1 66 LEU 66 65 65 LEU LEU A . n A 1 67 TYR 67 66 66 TYR TYR A . n A 1 68 TYR 68 67 67 TYR TYR A . n A 1 69 THR 69 68 68 THR THR A . n A 1 70 GLU 70 69 69 GLU GLU A . n A 1 71 PHE 71 70 70 PHE PHE A . n A 1 72 THR 72 71 71 THR THR A . n A 1 73 PRO 73 72 72 PRO PRO A . n A 1 74 THR 74 73 73 THR THR A . n A 1 75 GLU 75 74 74 GLU GLU A . n A 1 76 LYS 76 75 75 LYS LYS A . n A 1 77 ASP 77 76 76 ASP ASP A . n A 1 78 GLU 78 77 77 GLU GLU A . n A 1 79 TYR 79 78 78 TYR TYR A . n A 1 80 ALA 80 79 79 ALA ALA A . n A 1 81 CYS 81 80 80 CYS CYS A . n A 1 82 ARG 82 81 81 ARG ARG A . n A 1 83 VAL 83 82 82 VAL VAL A . n A 1 84 ASN 84 83 83 ASN ASN A . n A 1 85 HIS 85 84 84 HIS HIS A . n A 1 86 VAL 86 85 85 VAL VAL A . n A 1 87 THR 87 86 86 THR THR A . n A 1 88 LEU 88 87 87 LEU LEU A . n A 1 89 SER 89 88 88 SER SER A . n A 1 90 GLN 90 89 89 GLN GLN A . n A 1 91 PRO 91 90 90 PRO PRO A . n A 1 92 LYS 92 91 91 LYS LYS A . n A 1 93 ILE 93 92 92 ILE ILE A . n A 1 94 VAL 94 93 93 VAL VAL A . n A 1 95 LYS 95 94 94 LYS LYS A . n A 1 96 TRP 96 95 95 TRP TRP A . n A 1 97 ASP 97 96 96 ASP ASP A . n A 1 98 ARG 98 97 97 ARG ARG A . n A 1 99 ASP 99 98 98 ASP ASP A . n A 1 100 MET 100 99 99 MET MET A . n B 1 1 MET 1 0 ? ? ? B . n B 1 2 ILE 2 1 1 ILE ILE B . n B 1 3 GLN 3 2 2 GLN GLN B . n B 1 4 ARG 4 3 3 ARG ARG B . n B 1 5 THR 5 4 4 THR THR B . n B 1 6 PRO 6 5 5 PRO PRO B . n B 1 7 LYS 7 6 6 LYS LYS B . n B 1 8 ILE 8 7 7 ILE ILE B . n B 1 9 GLN 9 8 8 GLN GLN B . n B 1 10 VAL 10 9 9 VAL VAL B . n B 1 11 TYR 11 10 10 TYR TYR B . n B 1 12 SER 12 11 11 SER SER B . n B 1 13 ARG 13 12 12 ARG ARG B . n B 1 14 HIS 14 13 13 HIS HIS B . n B 1 15 PRO 15 14 14 PRO PRO B . n B 1 16 ALA 16 15 15 ALA ALA B . n B 1 17 GLU 17 16 16 GLU GLU B . n B 1 18 ASN 18 17 17 ASN ASN B . n B 1 19 GLY 19 18 18 GLY GLY B . n B 1 20 LYS 20 19 19 LYS LYS B . n B 1 21 SER 21 20 20 SER SER B . n B 1 22 ASN 22 21 21 ASN ASN B . n B 1 23 PHE 23 22 22 PHE PHE B . n B 1 24 LEU 24 23 23 LEU LEU B . n B 1 25 ASN 25 24 24 ASN ASN B . n B 1 26 CYS 26 25 25 CYS CYS B . n B 1 27 TYR 27 26 26 TYR TYR B . n B 1 28 VAL 28 27 27 VAL VAL B . n B 1 29 SER 29 28 28 SER SER B . n B 1 30 GLY 30 29 29 GLY GLY B . n B 1 31 PHE 31 30 30 PHE PHE B . n B 1 32 HIS 32 31 31 HIS HIS B . n B 1 33 PRO 33 32 32 PRO PRO B . n B 1 34 CYS 34 33 33 CYS CYS B . n B 1 35 ASP 35 34 34 ASP ASP B . n B 1 36 ILE 36 35 35 ILE ILE B . n B 1 37 GLU 37 36 36 GLU GLU B . n B 1 38 VAL 38 37 37 VAL VAL B . n B 1 39 ASP 39 38 38 ASP ASP B . n B 1 40 LEU 40 39 39 LEU LEU B . n B 1 41 LEU 41 40 40 LEU LEU B . n B 1 42 LYS 42 41 41 LYS LYS B . n B 1 43 ASN 43 42 42 ASN ASN B . n B 1 44 GLY 44 43 43 GLY GLY B . n B 1 45 GLU 45 44 44 GLU GLU B . n B 1 46 ARG 46 45 45 ARG ARG B . n B 1 47 ILE 47 46 46 ILE ILE B . n B 1 48 GLU 48 47 47 GLU GLU B . n B 1 49 LYS 49 48 48 LYS LYS B . n B 1 50 VAL 50 49 49 VAL VAL B . n B 1 51 GLU 51 50 50 GLU GLU B . n B 1 52 HIS 52 51 51 HIS HIS B . n B 1 53 SER 53 52 52 SER SER B . n B 1 54 ASP 54 53 53 ASP ASP B . n B 1 55 LEU 55 54 54 LEU LEU B . n B 1 56 SER 56 55 55 SER SER B . n B 1 57 PHE 57 56 56 PHE PHE B . n B 1 58 SER 58 57 57 SER SER B . n B 1 59 LYS 59 58 58 LYS LYS B . n B 1 60 ASP 60 59 59 ASP ASP B . n B 1 61 TRP 61 60 60 TRP TRP B . n B 1 62 SER 62 61 61 SER SER B . n B 1 63 PHE 63 62 62 PHE PHE B . n B 1 64 TYR 64 63 63 TYR TYR B . n B 1 65 LEU 65 64 64 LEU LEU B . n B 1 66 LEU 66 65 65 LEU LEU B . n B 1 67 TYR 67 66 66 TYR TYR B . n B 1 68 TYR 68 67 67 TYR TYR B . n B 1 69 THR 69 68 68 THR THR B . n B 1 70 GLU 70 69 69 GLU GLU B . n B 1 71 PHE 71 70 70 PHE PHE B . n B 1 72 THR 72 71 71 THR THR B . n B 1 73 PRO 73 72 72 PRO PRO B . n B 1 74 THR 74 73 73 THR THR B . n B 1 75 GLU 75 74 74 GLU GLU B . n B 1 76 LYS 76 75 75 LYS LYS B . n B 1 77 ASP 77 76 76 ASP ASP B . n B 1 78 GLU 78 77 77 GLU GLU B . n B 1 79 TYR 79 78 78 TYR TYR B . n B 1 80 ALA 80 79 79 ALA ALA B . n B 1 81 CYS 81 80 80 CYS CYS B . n B 1 82 ARG 82 81 81 ARG ARG B . n B 1 83 VAL 83 82 82 VAL VAL B . n B 1 84 ASN 84 83 83 ASN ASN B . n B 1 85 HIS 85 84 84 HIS HIS B . n B 1 86 VAL 86 85 85 VAL VAL B . n B 1 87 THR 87 86 86 THR THR B . n B 1 88 LEU 88 87 87 LEU LEU B . n B 1 89 SER 89 88 88 SER SER B . n B 1 90 GLN 90 89 89 GLN GLN B . n B 1 91 PRO 91 90 90 PRO PRO B . n B 1 92 LYS 92 91 91 LYS LYS B . n B 1 93 ILE 93 92 92 ILE ILE B . n B 1 94 VAL 94 93 93 VAL VAL B . n B 1 95 LYS 95 94 94 LYS LYS B . n B 1 96 TRP 96 95 95 TRP TRP B . n B 1 97 ASP 97 96 96 ASP ASP B . n B 1 98 ARG 98 97 97 ARG ARG B . n B 1 99 ASP 99 98 ? ? ? B . n B 1 100 MET 100 99 ? ? ? B . n C 1 1 MET 1 0 ? ? ? C . n C 1 2 ILE 2 1 1 ILE ILE C . n C 1 3 GLN 3 2 2 GLN GLN C . n C 1 4 ARG 4 3 3 ARG ARG C . n C 1 5 THR 5 4 4 THR THR C . n C 1 6 PRO 6 5 5 PRO PRO C . n C 1 7 LYS 7 6 6 LYS LYS C . n C 1 8 ILE 8 7 7 ILE ILE C . n C 1 9 GLN 9 8 8 GLN GLN C . n C 1 10 VAL 10 9 9 VAL VAL C . n C 1 11 TYR 11 10 10 TYR TYR C . n C 1 12 SER 12 11 11 SER SER C . n C 1 13 ARG 13 12 12 ARG ARG C . n C 1 14 HIS 14 13 13 HIS HIS C . n C 1 15 PRO 15 14 14 PRO PRO C . n C 1 16 ALA 16 15 15 ALA ALA C . n C 1 17 GLU 17 16 16 GLU GLU C . n C 1 18 ASN 18 17 17 ASN ASN C . n C 1 19 GLY 19 18 18 GLY GLY C . n C 1 20 LYS 20 19 19 LYS LYS C . n C 1 21 SER 21 20 20 SER SER C . n C 1 22 ASN 22 21 21 ASN ASN C . n C 1 23 PHE 23 22 22 PHE PHE C . n C 1 24 LEU 24 23 23 LEU LEU C . n C 1 25 ASN 25 24 24 ASN ASN C . n C 1 26 CYS 26 25 25 CYS CYS C . n C 1 27 TYR 27 26 26 TYR TYR C . n C 1 28 VAL 28 27 27 VAL VAL C . n C 1 29 SER 29 28 28 SER SER C . n C 1 30 GLY 30 29 29 GLY GLY C . n C 1 31 PHE 31 30 30 PHE PHE C . n C 1 32 HIS 32 31 31 HIS HIS C . n C 1 33 PRO 33 32 32 PRO PRO C . n C 1 34 CYS 34 33 33 CYS CYS C . n C 1 35 ASP 35 34 34 ASP ASP C . n C 1 36 ILE 36 35 35 ILE ILE C . n C 1 37 GLU 37 36 36 GLU GLU C . n C 1 38 VAL 38 37 37 VAL VAL C . n C 1 39 ASP 39 38 38 ASP ASP C . n C 1 40 LEU 40 39 39 LEU LEU C . n C 1 41 LEU 41 40 40 LEU LEU C . n C 1 42 LYS 42 41 41 LYS LYS C . n C 1 43 ASN 43 42 42 ASN ASN C . n C 1 44 GLY 44 43 43 GLY GLY C . n C 1 45 GLU 45 44 44 GLU GLU C . n C 1 46 ARG 46 45 45 ARG ARG C . n C 1 47 ILE 47 46 46 ILE ILE C . n C 1 48 GLU 48 47 47 GLU GLU C . n C 1 49 LYS 49 48 48 LYS LYS C . n C 1 50 VAL 50 49 49 VAL VAL C . n C 1 51 GLU 51 50 50 GLU GLU C . n C 1 52 HIS 52 51 51 HIS HIS C . n C 1 53 SER 53 52 52 SER SER C . n C 1 54 ASP 54 53 53 ASP ASP C . n C 1 55 LEU 55 54 54 LEU LEU C . n C 1 56 SER 56 55 55 SER SER C . n C 1 57 PHE 57 56 56 PHE PHE C . n C 1 58 SER 58 57 57 SER SER C . n C 1 59 LYS 59 58 58 LYS LYS C . n C 1 60 ASP 60 59 59 ASP ASP C . n C 1 61 TRP 61 60 60 TRP TRP C . n C 1 62 SER 62 61 61 SER SER C . n C 1 63 PHE 63 62 62 PHE PHE C . n C 1 64 TYR 64 63 63 TYR TYR C . n C 1 65 LEU 65 64 64 LEU LEU C . n C 1 66 LEU 66 65 65 LEU LEU C . n C 1 67 TYR 67 66 66 TYR TYR C . n C 1 68 TYR 68 67 67 TYR TYR C . n C 1 69 THR 69 68 68 THR THR C . n C 1 70 GLU 70 69 69 GLU GLU C . n C 1 71 PHE 71 70 70 PHE PHE C . n C 1 72 THR 72 71 71 THR THR C . n C 1 73 PRO 73 72 72 PRO PRO C . n C 1 74 THR 74 73 73 THR THR C . n C 1 75 GLU 75 74 74 GLU GLU C . n C 1 76 LYS 76 75 75 LYS LYS C . n C 1 77 ASP 77 76 76 ASP ASP C . n C 1 78 GLU 78 77 77 GLU GLU C . n C 1 79 TYR 79 78 78 TYR TYR C . n C 1 80 ALA 80 79 79 ALA ALA C . n C 1 81 CYS 81 80 80 CYS CYS C . n C 1 82 ARG 82 81 81 ARG ARG C . n C 1 83 VAL 83 82 82 VAL VAL C . n C 1 84 ASN 84 83 83 ASN ASN C . n C 1 85 HIS 85 84 84 HIS HIS C . n C 1 86 VAL 86 85 85 VAL VAL C . n C 1 87 THR 87 86 86 THR THR C . n C 1 88 LEU 88 87 87 LEU LEU C . n C 1 89 SER 89 88 88 SER SER C . n C 1 90 GLN 90 89 89 GLN GLN C . n C 1 91 PRO 91 90 90 PRO PRO C . n C 1 92 LYS 92 91 91 LYS LYS C . n C 1 93 ILE 93 92 92 ILE ILE C . n C 1 94 VAL 94 93 93 VAL VAL C . n C 1 95 LYS 95 94 94 LYS LYS C . n C 1 96 TRP 96 95 95 TRP TRP C . n C 1 97 ASP 97 96 96 ASP ASP C . n C 1 98 ARG 98 97 97 ARG ARG C . n C 1 99 ASP 99 98 98 ASP ASP C . n C 1 100 MET 100 99 99 MET MET C . n D 1 1 MET 1 0 ? ? ? D . n D 1 2 ILE 2 1 1 ILE ILE D . n D 1 3 GLN 3 2 2 GLN GLN D . n D 1 4 ARG 4 3 3 ARG ARG D . n D 1 5 THR 5 4 4 THR THR D . n D 1 6 PRO 6 5 5 PRO PRO D . n D 1 7 LYS 7 6 6 LYS LYS D . n D 1 8 ILE 8 7 7 ILE ILE D . n D 1 9 GLN 9 8 8 GLN GLN D . n D 1 10 VAL 10 9 9 VAL VAL D . n D 1 11 TYR 11 10 10 TYR TYR D . n D 1 12 SER 12 11 11 SER SER D . n D 1 13 ARG 13 12 12 ARG ARG D . n D 1 14 HIS 14 13 13 HIS HIS D . n D 1 15 PRO 15 14 14 PRO PRO D . n D 1 16 ALA 16 15 15 ALA ALA D . n D 1 17 GLU 17 16 16 GLU GLU D . n D 1 18 ASN 18 17 17 ASN ASN D . n D 1 19 GLY 19 18 18 GLY GLY D . n D 1 20 LYS 20 19 19 LYS LYS D . n D 1 21 SER 21 20 20 SER SER D . n D 1 22 ASN 22 21 21 ASN ASN D . n D 1 23 PHE 23 22 22 PHE PHE D . n D 1 24 LEU 24 23 23 LEU LEU D . n D 1 25 ASN 25 24 24 ASN ASN D . n D 1 26 CYS 26 25 25 CYS CYS D . n D 1 27 TYR 27 26 26 TYR TYR D . n D 1 28 VAL 28 27 27 VAL VAL D . n D 1 29 SER 29 28 28 SER SER D . n D 1 30 GLY 30 29 29 GLY GLY D . n D 1 31 PHE 31 30 30 PHE PHE D . n D 1 32 HIS 32 31 31 HIS HIS D . n D 1 33 PRO 33 32 32 PRO PRO D . n D 1 34 CYS 34 33 33 CYS CYS D . n D 1 35 ASP 35 34 34 ASP ASP D . n D 1 36 ILE 36 35 35 ILE ILE D . n D 1 37 GLU 37 36 36 GLU GLU D . n D 1 38 VAL 38 37 37 VAL VAL D . n D 1 39 ASP 39 38 38 ASP ASP D . n D 1 40 LEU 40 39 39 LEU LEU D . n D 1 41 LEU 41 40 40 LEU LEU D . n D 1 42 LYS 42 41 41 LYS LYS D . n D 1 43 ASN 43 42 42 ASN ASN D . n D 1 44 GLY 44 43 43 GLY GLY D . n D 1 45 GLU 45 44 44 GLU GLU D . n D 1 46 ARG 46 45 45 ARG ARG D . n D 1 47 ILE 47 46 46 ILE ILE D . n D 1 48 GLU 48 47 47 GLU GLU D . n D 1 49 LYS 49 48 48 LYS LYS D . n D 1 50 VAL 50 49 49 VAL VAL D . n D 1 51 GLU 51 50 50 GLU GLU D . n D 1 52 HIS 52 51 51 HIS HIS D . n D 1 53 SER 53 52 52 SER SER D . n D 1 54 ASP 54 53 53 ASP ASP D . n D 1 55 LEU 55 54 54 LEU LEU D . n D 1 56 SER 56 55 55 SER SER D . n D 1 57 PHE 57 56 56 PHE PHE D . n D 1 58 SER 58 57 57 SER SER D . n D 1 59 LYS 59 58 58 LYS LYS D . n D 1 60 ASP 60 59 59 ASP ASP D . n D 1 61 TRP 61 60 60 TRP TRP D . n D 1 62 SER 62 61 61 SER SER D . n D 1 63 PHE 63 62 62 PHE PHE D . n D 1 64 TYR 64 63 63 TYR TYR D . n D 1 65 LEU 65 64 64 LEU LEU D . n D 1 66 LEU 66 65 65 LEU LEU D . n D 1 67 TYR 67 66 66 TYR TYR D . n D 1 68 TYR 68 67 67 TYR TYR D . n D 1 69 THR 69 68 68 THR THR D . n D 1 70 GLU 70 69 69 GLU GLU D . n D 1 71 PHE 71 70 70 PHE PHE D . n D 1 72 THR 72 71 71 THR THR D . n D 1 73 PRO 73 72 72 PRO PRO D . n D 1 74 THR 74 73 73 THR THR D . n D 1 75 GLU 75 74 74 GLU GLU D . n D 1 76 LYS 76 75 75 LYS LYS D . n D 1 77 ASP 77 76 76 ASP ASP D . n D 1 78 GLU 78 77 77 GLU GLU D . n D 1 79 TYR 79 78 78 TYR TYR D . n D 1 80 ALA 80 79 79 ALA ALA D . n D 1 81 CYS 81 80 80 CYS CYS D . n D 1 82 ARG 82 81 81 ARG ARG D . n D 1 83 VAL 83 82 82 VAL VAL D . n D 1 84 ASN 84 83 83 ASN ASN D . n D 1 85 HIS 85 84 84 HIS HIS D . n D 1 86 VAL 86 85 85 VAL VAL D . n D 1 87 THR 87 86 86 THR THR D . n D 1 88 LEU 88 87 87 LEU LEU D . n D 1 89 SER 89 88 88 SER SER D . n D 1 90 GLN 90 89 89 GLN GLN D . n D 1 91 PRO 91 90 90 PRO PRO D . n D 1 92 LYS 92 91 91 LYS LYS D . n D 1 93 ILE 93 92 92 ILE ILE D . n D 1 94 VAL 94 93 93 VAL VAL D . n D 1 95 LYS 95 94 94 LYS LYS D . n D 1 96 TRP 96 95 95 TRP TRP D . n D 1 97 ASP 97 96 96 ASP ASP D . n D 1 98 ARG 98 97 97 ARG ARG D . n D 1 99 ASP 99 98 98 ASP ASP D . n D 1 100 MET 100 99 99 MET MET D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 TFX 1 101 1 TFX TFX A . F 2 TFX 1 102 1 TFX TFX A . G 2 TFX 1 101 1 TFX TFX B . H 2 TFX 1 102 1 TFX TFX B . I 2 TFX 1 101 1 TFX TFX C . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MxCuBE 'data collection' . ? 1 BALBES phasing . ? 2 REFMAC refinement 5.8.0069 ? 3 XDS 'data reduction' . ? 4 SCALA 'data scaling' . ? 5 # _cell.entry_id 4RA3 _cell.length_a 80.038 _cell.length_b 80.038 _cell.length_c 177.700 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4RA3 _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? # _exptl.entry_id 4RA3 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.45 _exptl_crystal.density_percent_sol 64.38 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;25% v/v PEG4000, 0.1 M sodium chloride, 5 mM thioflavin, 0.1 M HEPES sodium, pH 8.0, VAPOR DIFFUSION, SITTING DROP, temperature 293K ; # _diffrn.id 1 _diffrn.ambient_temp 110 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.pdbx_collection_date 2014-01-14 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'single crystal Si(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97088 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1)' _diffrn_source.pdbx_synchrotron_site 'PETRA III, EMBL c/o DESY' _diffrn_source.pdbx_synchrotron_beamline 'P13 (MX1)' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97088 # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4RA3 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 177.70 _reflns.d_resolution_high 2.80 _reflns.number_obs 16940 _reflns.number_all 16940 _reflns.percent_possible_obs 100 _reflns.pdbx_Rmerge_I_obs 0.059 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 21.4 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 9.6 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.80 _reflns_shell.d_res_low 2.95 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs 1.139 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.0 _reflns_shell.pdbx_redundancy 10 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4RA3 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 16036 _refine.ls_number_reflns_all 16940 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 69.31 _refine.ls_d_res_high 2.80 _refine.ls_percent_reflns_obs 99.91 _refine.ls_R_factor_obs 0.17252 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.17075 _refine.ls_R_factor_R_free 0.20649 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 862 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.949 _refine.correlation_coeff_Fo_to_Fc_free 0.943 _refine.B_iso_mean 113.054 _refine.aniso_B[1][1] 26.34 _refine.aniso_B[2][2] 26.34 _refine.aniso_B[3][3] -52.68 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB ENTRY 3S6C' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.123 _refine.pdbx_overall_ESU_R_Free 0.057 _refine.overall_SU_ML 0.188 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 9.558 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3307 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 100 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 3407 _refine_hist.d_res_high 2.80 _refine_hist.d_res_low 69.31 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.010 0.019 ? 3514 'X-RAY DIFFRACTION' ? r_bond_other_d 0.001 0.020 ? 3203 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.453 1.925 ? 4773 'X-RAY DIFFRACTION' ? r_angle_other_deg 1.548 3.000 ? 7376 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 9.926 5.000 ? 391 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 42.454 23.966 ? 179 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 21.408 15.000 ? 591 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 28.387 15.000 ? 20 'X-RAY DIFFRACTION' ? r_chiral_restr 0.084 0.200 ? 479 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.007 0.021 ? 4410 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.002 0.020 ? 858 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 6.823 11.082 ? 1576 'X-RAY DIFFRACTION' ? r_mcbond_other 6.819 11.079 ? 1575 'X-RAY DIFFRACTION' ? r_mcangle_it 9.810 16.606 ? 1963 'X-RAY DIFFRACTION' ? r_mcangle_other 9.734 16.208 ? 1964 'X-RAY DIFFRACTION' ? r_scbond_it 7.330 11.476 ? 1938 'X-RAY DIFFRACTION' ? r_scbond_other 7.204 11.209 ? 1939 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_other 10.519 16.606 ? 2811 'X-RAY DIFFRACTION' ? r_long_range_B_refined 13.135 ? ? 2955 'X-RAY DIFFRACTION' ? r_long_range_B_other 13.133 ? ? 2956 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso _refine_ls_restr_ncs.pdbx_asym_id _refine_ls_restr_ncs.pdbx_rms _refine_ls_restr_ncs.pdbx_weight 1 A 5021 0.15 0.05 'interatomic distance' 1 1 'X-RAY DIFFRACTION' ? ? ? ? ? ? 2 B 5021 0.15 0.05 'interatomic distance' 1 2 'X-RAY DIFFRACTION' ? ? ? ? ? ? 1 A 5283 0.14 0.05 'interatomic distance' 2 3 'X-RAY DIFFRACTION' ? ? ? ? ? ? 2 C 5283 0.14 0.05 'interatomic distance' 2 4 'X-RAY DIFFRACTION' ? ? ? ? ? ? 1 A 5121 0.16 0.05 'interatomic distance' 3 5 'X-RAY DIFFRACTION' ? ? ? ? ? ? 2 D 5121 0.16 0.05 'interatomic distance' 3 6 'X-RAY DIFFRACTION' ? ? ? ? ? ? 1 B 4994 0.16 0.05 'interatomic distance' 4 7 'X-RAY DIFFRACTION' ? ? ? ? ? ? 2 C 4994 0.16 0.05 'interatomic distance' 4 8 'X-RAY DIFFRACTION' ? ? ? ? ? ? 1 B 4936 0.17 0.05 'interatomic distance' 5 9 'X-RAY DIFFRACTION' ? ? ? ? ? ? 2 D 4936 0.17 0.05 'interatomic distance' 5 10 'X-RAY DIFFRACTION' ? ? ? ? ? ? 1 C 5317 0.15 0.05 'interatomic distance' 6 11 'X-RAY DIFFRACTION' ? ? ? ? ? ? 2 D 5317 0.15 0.05 'interatomic distance' 6 12 'X-RAY DIFFRACTION' ? ? ? ? ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.800 _refine_ls_shell.d_res_low 2.873 _refine_ls_shell.number_reflns_R_work 1171 _refine_ls_shell.R_factor_R_work 0.525 _refine_ls_shell.percent_reflns_obs 99.84 _refine_ls_shell.R_factor_R_free 0.798 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 68 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # loop_ _struct_ncs_dom.id _struct_ncs_dom.details _struct_ncs_dom.pdbx_ens_id 1 A 1 2 B 1 1 A 2 2 C 2 1 A 3 2 D 3 1 B 4 2 C 4 1 B 5 2 D 5 1 C 6 2 D 6 # loop_ _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_comp_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_comp_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.selection_details 1 1 0 A ILE 2 . A ASP 97 . A ILE 1 A ASP 96 0 ? 1 2 0 B ILE 2 . B ASP 97 . B ILE 1 B ASP 96 0 ? 2 1 0 A ILE 2 . A ASP 99 . A ILE 1 A ASP 98 0 ? 2 2 0 C ILE 2 . C ASP 99 . C ILE 1 C ASP 98 0 ? 3 1 0 A ILE 2 . A ASP 99 . A ILE 1 A ASP 98 0 ? 3 2 0 D ILE 2 . D ASP 99 . D ILE 1 D ASP 98 0 ? 4 1 0 B ILE 2 . B ASP 97 . B ILE 1 B ASP 96 0 ? 4 2 0 C ILE 2 . C ASP 97 . C ILE 1 C ASP 96 0 ? 5 1 0 B ILE 2 . B ASP 97 . B ILE 1 B ASP 96 0 ? 5 2 0 D ILE 2 . D ASP 97 . D ILE 1 D ASP 96 0 ? 6 1 0 C ILE 2 . C MET 100 . C ILE 1 C MET 99 0 ? 6 2 0 D ILE 2 . D MET 100 . D ILE 1 D MET 99 0 ? # loop_ _struct_ncs_ens.id _struct_ncs_ens.details 1 ? 2 ? 3 ? 4 ? 5 ? 6 ? # _database_PDB_matrix.entry_id 4RA3 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4RA3 _struct.title 'Crystal structure of dimeric S33C beta-2 microglobulin mutant in complex with Thioflavin (ThT) at 2.8 Angstrom resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4RA3 _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' _struct_keywords.text 'amyloidosis, protein aggregation, thioflavin, covalent dimer, oligomerization, beta sandwich, inclusion bodies, IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 2 ? I N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code B2MG_HUMAN _struct_ref.pdbx_db_accession P61769 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;IQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYAC RVNHVTLSQPKIVKWDRDM ; _struct_ref.pdbx_align_begin 21 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4RA3 A 2 ? 100 ? P61769 21 ? 119 ? 1 99 2 1 4RA3 B 2 ? 100 ? P61769 21 ? 119 ? 1 99 3 1 4RA3 C 2 ? 100 ? P61769 21 ? 119 ? 1 99 4 1 4RA3 D 2 ? 100 ? P61769 21 ? 119 ? 1 99 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4RA3 MET A 1 ? UNP P61769 ? ? 'expression tag' 0 1 1 4RA3 CYS A 34 ? UNP P61769 SER 53 'engineered mutation' 33 2 2 4RA3 MET B 1 ? UNP P61769 ? ? 'expression tag' 0 3 2 4RA3 CYS B 34 ? UNP P61769 SER 53 'engineered mutation' 33 4 3 4RA3 MET C 1 ? UNP P61769 ? ? 'expression tag' 0 5 3 4RA3 CYS C 34 ? UNP P61769 SER 53 'engineered mutation' 33 6 4 4RA3 MET D 1 ? UNP P61769 ? ? 'expression tag' 0 7 4 4RA3 CYS D 34 ? UNP P61769 SER 53 'engineered mutation' 33 8 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 author_and_software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1140 ? 1 MORE -7 ? 1 'SSA (A^2)' 12300 ? 2 'ABSA (A^2)' 1130 ? 2 MORE -9 ? 2 'SSA (A^2)' 12150 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,E,F,I 2 1 B,D,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 26 SG ? ? ? 1_555 A CYS 81 SG ? ? A CYS 25 A CYS 80 1_555 ? ? ? ? ? ? ? 2.040 ? ? disulf2 disulf ? ? A CYS 34 SG ? ? ? 1_555 C CYS 34 SG ? ? A CYS 33 C CYS 33 1_555 ? ? ? ? ? ? ? 1.981 ? ? disulf3 disulf ? ? B CYS 26 SG ? ? ? 1_555 B CYS 81 SG ? ? B CYS 25 B CYS 80 1_555 ? ? ? ? ? ? ? 2.022 ? ? disulf4 disulf ? ? C CYS 26 SG ? ? ? 1_555 C CYS 81 SG ? ? C CYS 25 C CYS 80 1_555 ? ? ? ? ? ? ? 2.033 ? ? disulf5 disulf ? ? D CYS 26 SG ? ? ? 1_555 D CYS 81 SG ? ? D CYS 25 D CYS 80 1_555 ? ? ? ? ? ? ? 2.031 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 CYS A 26 ? CYS A 81 ? CYS A 25 ? 1_555 CYS A 80 ? 1_555 SG SG . . . None 'Disulfide bridge' 2 CYS A 34 ? CYS C 34 ? CYS A 33 ? 1_555 CYS C 33 ? 1_555 SG SG . . . None 'Disulfide bridge' 3 CYS B 26 ? CYS B 81 ? CYS B 25 ? 1_555 CYS B 80 ? 1_555 SG SG . . . None 'Disulfide bridge' 4 CYS C 26 ? CYS C 81 ? CYS C 25 ? 1_555 CYS C 80 ? 1_555 SG SG . . . None 'Disulfide bridge' 5 CYS D 26 ? CYS D 81 ? CYS D 25 ? 1_555 CYS D 80 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 HIS 32 A . ? HIS 31 A PRO 33 A ? PRO 32 A 1 7.26 2 HIS 32 B . ? HIS 31 B PRO 33 B ? PRO 32 B 1 3.85 3 HIS 32 C . ? HIS 31 C PRO 33 C ? PRO 32 C 1 0.26 4 HIS 32 D . ? HIS 31 D PRO 33 D ? PRO 32 D 1 2.85 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? C ? 4 ? D ? 4 ? E ? 4 ? F ? 4 ? G ? 4 ? H ? 4 ? I ? 4 ? J ? 4 ? K ? 4 ? L ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel F 3 4 ? anti-parallel G 1 2 ? anti-parallel G 2 3 ? anti-parallel G 3 4 ? anti-parallel H 1 2 ? anti-parallel H 2 3 ? anti-parallel H 3 4 ? anti-parallel I 1 2 ? anti-parallel I 2 3 ? anti-parallel I 3 4 ? anti-parallel J 1 2 ? anti-parallel J 2 3 ? anti-parallel J 3 4 ? anti-parallel K 1 2 ? anti-parallel K 2 3 ? anti-parallel K 3 4 ? anti-parallel L 1 2 ? anti-parallel L 2 3 ? anti-parallel L 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 7 ? SER A 12 ? LYS A 6 SER A 11 A 2 ASN A 22 ? PHE A 31 ? ASN A 21 PHE A 30 A 3 PHE A 63 ? PHE A 71 ? PHE A 62 PHE A 70 A 4 GLU A 51 ? HIS A 52 ? GLU A 50 HIS A 51 B 1 LYS A 7 ? SER A 12 ? LYS A 6 SER A 11 B 2 ASN A 22 ? PHE A 31 ? ASN A 21 PHE A 30 B 3 PHE A 63 ? PHE A 71 ? PHE A 62 PHE A 70 B 4 SER A 56 ? PHE A 57 ? SER A 55 PHE A 56 C 1 GLU A 45 ? ARG A 46 ? GLU A 44 ARG A 45 C 2 GLU A 37 ? LYS A 42 ? GLU A 36 LYS A 41 C 3 TYR A 79 ? ASN A 84 ? TYR A 78 ASN A 83 C 4 LYS A 92 ? LYS A 95 ? LYS A 91 LYS A 94 D 1 LYS B 7 ? SER B 12 ? LYS B 6 SER B 11 D 2 ASN B 22 ? PHE B 31 ? ASN B 21 PHE B 30 D 3 PHE B 63 ? PHE B 71 ? PHE B 62 PHE B 70 D 4 GLU B 51 ? HIS B 52 ? GLU B 50 HIS B 51 E 1 LYS B 7 ? SER B 12 ? LYS B 6 SER B 11 E 2 ASN B 22 ? PHE B 31 ? ASN B 21 PHE B 30 E 3 PHE B 63 ? PHE B 71 ? PHE B 62 PHE B 70 E 4 SER B 56 ? PHE B 57 ? SER B 55 PHE B 56 F 1 GLU B 45 ? ARG B 46 ? GLU B 44 ARG B 45 F 2 GLU B 37 ? LYS B 42 ? GLU B 36 LYS B 41 F 3 TYR B 79 ? ASN B 84 ? TYR B 78 ASN B 83 F 4 LYS B 92 ? LYS B 95 ? LYS B 91 LYS B 94 G 1 LYS C 7 ? SER C 12 ? LYS C 6 SER C 11 G 2 ASN C 22 ? PHE C 31 ? ASN C 21 PHE C 30 G 3 PHE C 63 ? PHE C 71 ? PHE C 62 PHE C 70 G 4 GLU C 51 ? HIS C 52 ? GLU C 50 HIS C 51 H 1 LYS C 7 ? SER C 12 ? LYS C 6 SER C 11 H 2 ASN C 22 ? PHE C 31 ? ASN C 21 PHE C 30 H 3 PHE C 63 ? PHE C 71 ? PHE C 62 PHE C 70 H 4 SER C 56 ? PHE C 57 ? SER C 55 PHE C 56 I 1 GLU C 45 ? ARG C 46 ? GLU C 44 ARG C 45 I 2 GLU C 37 ? LYS C 42 ? GLU C 36 LYS C 41 I 3 TYR C 79 ? ASN C 84 ? TYR C 78 ASN C 83 I 4 LYS C 92 ? LYS C 95 ? LYS C 91 LYS C 94 J 1 LYS D 7 ? SER D 12 ? LYS D 6 SER D 11 J 2 ASN D 22 ? PHE D 31 ? ASN D 21 PHE D 30 J 3 PHE D 63 ? PHE D 71 ? PHE D 62 PHE D 70 J 4 GLU D 51 ? HIS D 52 ? GLU D 50 HIS D 51 K 1 LYS D 7 ? SER D 12 ? LYS D 6 SER D 11 K 2 ASN D 22 ? PHE D 31 ? ASN D 21 PHE D 30 K 3 PHE D 63 ? PHE D 71 ? PHE D 62 PHE D 70 K 4 SER D 56 ? PHE D 57 ? SER D 55 PHE D 56 L 1 GLU D 45 ? ARG D 46 ? GLU D 44 ARG D 45 L 2 GLU D 37 ? LYS D 42 ? GLU D 36 LYS D 41 L 3 TYR D 79 ? ASN D 84 ? TYR D 78 ASN D 83 L 4 LYS D 92 ? LYS D 95 ? LYS D 91 LYS D 94 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLN A 9 ? N GLN A 8 O TYR A 27 ? O TYR A 26 A 2 3 N CYS A 26 ? N CYS A 25 O TYR A 67 ? O TYR A 66 A 3 4 O TYR A 68 ? O TYR A 67 N GLU A 51 ? N GLU A 50 B 1 2 N GLN A 9 ? N GLN A 8 O TYR A 27 ? O TYR A 26 B 2 3 N CYS A 26 ? N CYS A 25 O TYR A 67 ? O TYR A 66 B 3 4 O TYR A 64 ? O TYR A 63 N SER A 56 ? N SER A 55 C 1 2 O GLU A 45 ? O GLU A 44 N LYS A 42 ? N LYS A 41 C 2 3 N ASP A 39 ? N ASP A 38 O ARG A 82 ? O ARG A 81 C 3 4 N VAL A 83 ? N VAL A 82 O LYS A 92 ? O LYS A 91 D 1 2 N GLN B 9 ? N GLN B 8 O TYR B 27 ? O TYR B 26 D 2 3 N CYS B 26 ? N CYS B 25 O TYR B 67 ? O TYR B 66 D 3 4 O TYR B 68 ? O TYR B 67 N GLU B 51 ? N GLU B 50 E 1 2 N GLN B 9 ? N GLN B 8 O TYR B 27 ? O TYR B 26 E 2 3 N CYS B 26 ? N CYS B 25 O TYR B 67 ? O TYR B 66 E 3 4 O TYR B 64 ? O TYR B 63 N SER B 56 ? N SER B 55 F 1 2 O GLU B 45 ? O GLU B 44 N LYS B 42 ? N LYS B 41 F 2 3 N ASP B 39 ? N ASP B 38 O ARG B 82 ? O ARG B 81 F 3 4 N VAL B 83 ? N VAL B 82 O LYS B 92 ? O LYS B 91 G 1 2 N GLN C 9 ? N GLN C 8 O TYR C 27 ? O TYR C 26 G 2 3 N ASN C 22 ? N ASN C 21 O PHE C 71 ? O PHE C 70 G 3 4 O TYR C 68 ? O TYR C 67 N GLU C 51 ? N GLU C 50 H 1 2 N GLN C 9 ? N GLN C 8 O TYR C 27 ? O TYR C 26 H 2 3 N ASN C 22 ? N ASN C 21 O PHE C 71 ? O PHE C 70 H 3 4 O TYR C 64 ? O TYR C 63 N SER C 56 ? N SER C 55 I 1 2 O GLU C 45 ? O GLU C 44 N LYS C 42 ? N LYS C 41 I 2 3 N ASP C 39 ? N ASP C 38 O ARG C 82 ? O ARG C 81 I 3 4 N VAL C 83 ? N VAL C 82 O LYS C 92 ? O LYS C 91 J 1 2 N GLN D 9 ? N GLN D 8 O TYR D 27 ? O TYR D 26 J 2 3 N ASN D 22 ? N ASN D 21 O PHE D 71 ? O PHE D 70 J 3 4 O TYR D 68 ? O TYR D 67 N GLU D 51 ? N GLU D 50 K 1 2 N GLN D 9 ? N GLN D 8 O TYR D 27 ? O TYR D 26 K 2 3 N ASN D 22 ? N ASN D 21 O PHE D 71 ? O PHE D 70 K 3 4 O TYR D 64 ? O TYR D 63 N SER D 56 ? N SER D 55 L 1 2 O GLU D 45 ? O GLU D 44 N LYS D 42 ? N LYS D 41 L 2 3 N ASP D 39 ? N ASP D 38 O ARG D 82 ? O ARG D 81 L 3 4 N VAL D 83 ? N VAL D 82 O LYS D 92 ? O LYS D 91 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A TFX 101 ? 5 'BINDING SITE FOR RESIDUE TFX A 101' AC2 Software A TFX 102 ? 5 'BINDING SITE FOR RESIDUE TFX A 102' AC3 Software B TFX 101 ? 5 'BINDING SITE FOR RESIDUE TFX B 101' AC4 Software B TFX 102 ? 5 'BINDING SITE FOR RESIDUE TFX B 102' AC5 Software C TFX 101 ? 8 'BINDING SITE FOR RESIDUE TFX C 101' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 TYR A 27 ? TYR A 26 . ? 1_555 ? 2 AC1 5 SER A 53 ? SER A 52 . ? 1_555 ? 3 AC1 5 SER A 56 ? SER A 55 . ? 1_555 ? 4 AC1 5 TYR A 64 ? TYR A 63 . ? 1_555 ? 5 AC1 5 TFX H . ? TFX B 102 . ? 1_555 ? 6 AC2 5 TYR A 11 ? TYR A 10 . ? 1_555 ? 7 AC2 5 TYR B 11 ? TYR B 10 . ? 1_555 ? 8 AC2 5 TYR B 27 ? TYR B 26 . ? 1_555 ? 9 AC2 5 TFX G . ? TFX B 101 . ? 1_555 ? 10 AC2 5 TFX H . ? TFX B 102 . ? 1_555 ? 11 AC3 5 TFX F . ? TFX A 102 . ? 1_555 ? 12 AC3 5 TYR B 27 ? TYR B 26 . ? 1_555 ? 13 AC3 5 SER B 56 ? SER B 55 . ? 1_555 ? 14 AC3 5 TYR B 64 ? TYR B 63 . ? 1_555 ? 15 AC3 5 LEU B 66 ? LEU B 65 . ? 1_555 ? 16 AC4 5 TYR A 27 ? TYR A 26 . ? 1_555 ? 17 AC4 5 TFX E . ? TFX A 101 . ? 1_555 ? 18 AC4 5 TFX F . ? TFX A 102 . ? 1_555 ? 19 AC4 5 GLN B 9 ? GLN B 8 . ? 1_555 ? 20 AC4 5 TYR B 11 ? TYR B 10 . ? 1_555 ? 21 AC5 8 GLN C 9 ? GLN C 8 . ? 1_555 ? 22 AC5 8 TYR C 11 ? TYR C 10 . ? 1_555 ? 23 AC5 8 SER C 12 ? SER C 11 . ? 1_555 ? 24 AC5 8 PRO C 15 ? PRO C 14 . ? 1_555 ? 25 AC5 8 MET C 100 ? MET C 99 . ? 1_555 ? 26 AC5 8 GLN D 9 ? GLN D 8 . ? 4_655 ? 27 AC5 8 TYR D 11 ? TYR D 10 . ? 4_655 ? 28 AC5 8 SER D 12 ? SER D 11 . ? 4_655 ? # _pdbx_entry_details.entry_id 4RA3 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 SG _pdbx_validate_close_contact.auth_asym_id_1 B _pdbx_validate_close_contact.auth_comp_id_1 CYS _pdbx_validate_close_contact.auth_seq_id_1 33 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 SG _pdbx_validate_close_contact.auth_asym_id_2 D _pdbx_validate_close_contact.auth_comp_id_2 CYS _pdbx_validate_close_contact.auth_seq_id_2 33 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.66 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 90 ? ? -38.66 123.55 2 1 ILE B 35 ? ? -173.06 149.38 3 1 PRO B 90 ? ? -37.12 121.60 4 1 HIS C 31 ? ? -170.80 137.78 5 1 ASP C 98 ? ? -77.93 45.90 6 1 ASN D 21 ? ? -112.60 -167.64 7 1 ILE D 35 ? ? -170.42 144.76 8 1 ASP D 98 ? ? -80.67 32.83 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B MET 0 ? B MET 1 2 1 Y 1 B ASP 98 ? B ASP 99 3 1 Y 1 B MET 99 ? B MET 100 4 1 Y 1 C MET 0 ? C MET 1 5 1 Y 1 D MET 0 ? D MET 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 PHE N N N N 247 PHE CA C N S 248 PHE C C N N 249 PHE O O N N 250 PHE CB C N N 251 PHE CG C Y N 252 PHE CD1 C Y N 253 PHE CD2 C Y N 254 PHE CE1 C Y N 255 PHE CE2 C Y N 256 PHE CZ C Y N 257 PHE OXT O N N 258 PHE H H N N 259 PHE H2 H N N 260 PHE HA H N N 261 PHE HB2 H N N 262 PHE HB3 H N N 263 PHE HD1 H N N 264 PHE HD2 H N N 265 PHE HE1 H N N 266 PHE HE2 H N N 267 PHE HZ H N N 268 PHE HXT H N N 269 PRO N N N N 270 PRO CA C N S 271 PRO C C N N 272 PRO O O N N 273 PRO CB C N N 274 PRO CG C N N 275 PRO CD C N N 276 PRO OXT O N N 277 PRO H H N N 278 PRO HA H N N 279 PRO HB2 H N N 280 PRO HB3 H N N 281 PRO HG2 H N N 282 PRO HG3 H N N 283 PRO HD2 H N N 284 PRO HD3 H N N 285 PRO HXT H N N 286 SER N N N N 287 SER CA C N S 288 SER C C N N 289 SER O O N N 290 SER CB C N N 291 SER OG O N N 292 SER OXT O N N 293 SER H H N N 294 SER H2 H N N 295 SER HA H N N 296 SER HB2 H N N 297 SER HB3 H N N 298 SER HG H N N 299 SER HXT H N N 300 TFX N1 N Y N 301 TFX S1 S Y N 302 TFX C2 C Y N 303 TFX N2 N N N 304 TFX C3 C Y N 305 TFX C4 C Y N 306 TFX C5 C Y N 307 TFX C6 C Y N 308 TFX C7 C Y N 309 TFX C8 C Y N 310 TFX C9 C Y N 311 TFX C10 C Y N 312 TFX C11 C Y N 313 TFX C12 C Y N 314 TFX C13 C Y N 315 TFX C14 C Y N 316 TFX C15 C N N 317 TFX C16 C N N 318 TFX C17 C N N 319 TFX C18 C N N 320 TFX H3 H N N 321 TFX H4 H N N 322 TFX H6 H N N 323 TFX H7 H N N 324 TFX H11 H N N 325 TFX H13 H N N 326 TFX H14 H N N 327 TFX H15 H N N 328 TFX H15A H N N 329 TFX H15B H N N 330 TFX H16 H N N 331 TFX H16A H N N 332 TFX H16B H N N 333 TFX H17 H N N 334 TFX H17A H N N 335 TFX H17B H N N 336 TFX H18 H N N 337 TFX H18A H N N 338 TFX H18B H N N 339 THR N N N N 340 THR CA C N S 341 THR C C N N 342 THR O O N N 343 THR CB C N R 344 THR OG1 O N N 345 THR CG2 C N N 346 THR OXT O N N 347 THR H H N N 348 THR H2 H N N 349 THR HA H N N 350 THR HB H N N 351 THR HG1 H N N 352 THR HG21 H N N 353 THR HG22 H N N 354 THR HG23 H N N 355 THR HXT H N N 356 TRP N N N N 357 TRP CA C N S 358 TRP C C N N 359 TRP O O N N 360 TRP CB C N N 361 TRP CG C Y N 362 TRP CD1 C Y N 363 TRP CD2 C Y N 364 TRP NE1 N Y N 365 TRP CE2 C Y N 366 TRP CE3 C Y N 367 TRP CZ2 C Y N 368 TRP CZ3 C Y N 369 TRP CH2 C Y N 370 TRP OXT O N N 371 TRP H H N N 372 TRP H2 H N N 373 TRP HA H N N 374 TRP HB2 H N N 375 TRP HB3 H N N 376 TRP HD1 H N N 377 TRP HE1 H N N 378 TRP HE3 H N N 379 TRP HZ2 H N N 380 TRP HZ3 H N N 381 TRP HH2 H N N 382 TRP HXT H N N 383 TYR N N N N 384 TYR CA C N S 385 TYR C C N N 386 TYR O O N N 387 TYR CB C N N 388 TYR CG C Y N 389 TYR CD1 C Y N 390 TYR CD2 C Y N 391 TYR CE1 C Y N 392 TYR CE2 C Y N 393 TYR CZ C Y N 394 TYR OH O N N 395 TYR OXT O N N 396 TYR H H N N 397 TYR H2 H N N 398 TYR HA H N N 399 TYR HB2 H N N 400 TYR HB3 H N N 401 TYR HD1 H N N 402 TYR HD2 H N N 403 TYR HE1 H N N 404 TYR HE2 H N N 405 TYR HH H N N 406 TYR HXT H N N 407 VAL N N N N 408 VAL CA C N S 409 VAL C C N N 410 VAL O O N N 411 VAL CB C N N 412 VAL CG1 C N N 413 VAL CG2 C N N 414 VAL OXT O N N 415 VAL H H N N 416 VAL H2 H N N 417 VAL HA H N N 418 VAL HB H N N 419 VAL HG11 H N N 420 VAL HG12 H N N 421 VAL HG13 H N N 422 VAL HG21 H N N 423 VAL HG22 H N N 424 VAL HG23 H N N 425 VAL HXT H N N 426 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 PHE N CA sing N N 235 PHE N H sing N N 236 PHE N H2 sing N N 237 PHE CA C sing N N 238 PHE CA CB sing N N 239 PHE CA HA sing N N 240 PHE C O doub N N 241 PHE C OXT sing N N 242 PHE CB CG sing N N 243 PHE CB HB2 sing N N 244 PHE CB HB3 sing N N 245 PHE CG CD1 doub Y N 246 PHE CG CD2 sing Y N 247 PHE CD1 CE1 sing Y N 248 PHE CD1 HD1 sing N N 249 PHE CD2 CE2 doub Y N 250 PHE CD2 HD2 sing N N 251 PHE CE1 CZ doub Y N 252 PHE CE1 HE1 sing N N 253 PHE CE2 CZ sing Y N 254 PHE CE2 HE2 sing N N 255 PHE CZ HZ sing N N 256 PHE OXT HXT sing N N 257 PRO N CA sing N N 258 PRO N CD sing N N 259 PRO N H sing N N 260 PRO CA C sing N N 261 PRO CA CB sing N N 262 PRO CA HA sing N N 263 PRO C O doub N N 264 PRO C OXT sing N N 265 PRO CB CG sing N N 266 PRO CB HB2 sing N N 267 PRO CB HB3 sing N N 268 PRO CG CD sing N N 269 PRO CG HG2 sing N N 270 PRO CG HG3 sing N N 271 PRO CD HD2 sing N N 272 PRO CD HD3 sing N N 273 PRO OXT HXT sing N N 274 SER N CA sing N N 275 SER N H sing N N 276 SER N H2 sing N N 277 SER CA C sing N N 278 SER CA CB sing N N 279 SER CA HA sing N N 280 SER C O doub N N 281 SER C OXT sing N N 282 SER CB OG sing N N 283 SER CB HB2 sing N N 284 SER CB HB3 sing N N 285 SER OG HG sing N N 286 SER OXT HXT sing N N 287 TFX N1 C8 doub Y N 288 TFX N1 C9 sing Y N 289 TFX N1 C17 sing N N 290 TFX S1 C8 sing Y N 291 TFX S1 C10 sing Y N 292 TFX C2 N2 sing N N 293 TFX C2 C3 doub Y N 294 TFX C2 C7 sing Y N 295 TFX N2 C15 sing N N 296 TFX N2 C16 sing N N 297 TFX C3 C4 sing Y N 298 TFX C4 C5 doub Y N 299 TFX C5 C6 sing Y N 300 TFX C5 C8 sing Y N 301 TFX C6 C7 doub Y N 302 TFX C9 C10 doub Y N 303 TFX C9 C14 sing Y N 304 TFX C10 C11 sing Y N 305 TFX C11 C12 doub Y N 306 TFX C12 C13 sing Y N 307 TFX C12 C18 sing N N 308 TFX C13 C14 doub Y N 309 TFX C3 H3 sing N N 310 TFX C4 H4 sing N N 311 TFX C6 H6 sing N N 312 TFX C7 H7 sing N N 313 TFX C11 H11 sing N N 314 TFX C13 H13 sing N N 315 TFX C14 H14 sing N N 316 TFX C15 H15 sing N N 317 TFX C15 H15A sing N N 318 TFX C15 H15B sing N N 319 TFX C16 H16 sing N N 320 TFX C16 H16A sing N N 321 TFX C16 H16B sing N N 322 TFX C17 H17 sing N N 323 TFX C17 H17A sing N N 324 TFX C17 H17B sing N N 325 TFX C18 H18 sing N N 326 TFX C18 H18A sing N N 327 TFX C18 H18B sing N N 328 THR N CA sing N N 329 THR N H sing N N 330 THR N H2 sing N N 331 THR CA C sing N N 332 THR CA CB sing N N 333 THR CA HA sing N N 334 THR C O doub N N 335 THR C OXT sing N N 336 THR CB OG1 sing N N 337 THR CB CG2 sing N N 338 THR CB HB sing N N 339 THR OG1 HG1 sing N N 340 THR CG2 HG21 sing N N 341 THR CG2 HG22 sing N N 342 THR CG2 HG23 sing N N 343 THR OXT HXT sing N N 344 TRP N CA sing N N 345 TRP N H sing N N 346 TRP N H2 sing N N 347 TRP CA C sing N N 348 TRP CA CB sing N N 349 TRP CA HA sing N N 350 TRP C O doub N N 351 TRP C OXT sing N N 352 TRP CB CG sing N N 353 TRP CB HB2 sing N N 354 TRP CB HB3 sing N N 355 TRP CG CD1 doub Y N 356 TRP CG CD2 sing Y N 357 TRP CD1 NE1 sing Y N 358 TRP CD1 HD1 sing N N 359 TRP CD2 CE2 doub Y N 360 TRP CD2 CE3 sing Y N 361 TRP NE1 CE2 sing Y N 362 TRP NE1 HE1 sing N N 363 TRP CE2 CZ2 sing Y N 364 TRP CE3 CZ3 doub Y N 365 TRP CE3 HE3 sing N N 366 TRP CZ2 CH2 doub Y N 367 TRP CZ2 HZ2 sing N N 368 TRP CZ3 CH2 sing Y N 369 TRP CZ3 HZ3 sing N N 370 TRP CH2 HH2 sing N N 371 TRP OXT HXT sing N N 372 TYR N CA sing N N 373 TYR N H sing N N 374 TYR N H2 sing N N 375 TYR CA C sing N N 376 TYR CA CB sing N N 377 TYR CA HA sing N N 378 TYR C O doub N N 379 TYR C OXT sing N N 380 TYR CB CG sing N N 381 TYR CB HB2 sing N N 382 TYR CB HB3 sing N N 383 TYR CG CD1 doub Y N 384 TYR CG CD2 sing Y N 385 TYR CD1 CE1 sing Y N 386 TYR CD1 HD1 sing N N 387 TYR CD2 CE2 doub Y N 388 TYR CD2 HD2 sing N N 389 TYR CE1 CZ doub Y N 390 TYR CE1 HE1 sing N N 391 TYR CE2 CZ sing Y N 392 TYR CE2 HE2 sing N N 393 TYR CZ OH sing N N 394 TYR OH HH sing N N 395 TYR OXT HXT sing N N 396 VAL N CA sing N N 397 VAL N H sing N N 398 VAL N H2 sing N N 399 VAL CA C sing N N 400 VAL CA CB sing N N 401 VAL CA HA sing N N 402 VAL C O doub N N 403 VAL C OXT sing N N 404 VAL CB CG1 sing N N 405 VAL CB CG2 sing N N 406 VAL CB HB sing N N 407 VAL CG1 HG11 sing N N 408 VAL CG1 HG12 sing N N 409 VAL CG1 HG13 sing N N 410 VAL CG2 HG21 sing N N 411 VAL CG2 HG22 sing N N 412 VAL CG2 HG23 sing N N 413 VAL OXT HXT sing N N 414 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3S6C _pdbx_initial_refinement_model.details 'PDB ENTRY 3S6C' # loop_ _pdbx_reflns_twin.domain_id _pdbx_reflns_twin.crystal_id _pdbx_reflns_twin.diffrn_id _pdbx_reflns_twin.type _pdbx_reflns_twin.operator _pdbx_reflns_twin.fraction 1 1 1 ? 'H, K, L' 0.463 2 1 1 ? -h,-k,l 0.537 # _atom_sites.entry_id 4RA3 _atom_sites.fract_transf_matrix[1][1] 0.012494 _atom_sites.fract_transf_matrix[1][2] 0.007213 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014427 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005627 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_