data_4S1P # _entry.id 4S1P # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4S1P RCSB RCSB088068 WWPDB D_1000088068 # _pdbx_database_related.db_name TargetTrack _pdbx_database_related.db_id MCSG-APC103766 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 4S1P _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2015-01-14 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Osipiuk, J.' 1 'Cuff, M.E.' 2 'Wu, R.' 3 'Endres, M.' 4 'Joachimiak, A.' 5 'Midwest Center for Structural Genomics (MCSG)' 6 # _citation.id primary _citation.title 'Shel_16390 protein, a putative SGNH hydrolase from Slackia heliotrinireducens' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Osipiuk, J.' 1 primary 'Cuff, M.E.' 2 primary 'Wu, R.' 3 primary 'Endres, M.' 4 primary 'Joachimiak, A.' 5 # _cell.length_a 40.591 _cell.length_b 67.023 _cell.length_c 71.544 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 4S1P _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.entry_id 4S1P _symmetry.Int_Tables_number 19 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Uncharacterized protein' 20415.705 1 ? ? ? ? 2 non-polymer syn 'UNKNOWN LIGAND' ? 1 ? ? ? ? 3 water nat water 18.015 200 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;SNA(MSE)RIL(MSE)LGNSLTTANH(MSE)PD(MSE)LAELLTAEVRVHARGGARLAEHLNPKTRNGALTQAALANEAW DFVV(MSE)QE(MSE)SHGPATSPTAYARSVASLSEAAKAAGAQPVIYGTWPYRAGCAKLVKLG(MSE)SHDD(MSE)SL R(MSE)AEAFAQAAADSGALLADVAAPFRAGSADELYAADGVHPSPAGSRLAALVLAET(MSE)GKGIRPW ; _entity_poly.pdbx_seq_one_letter_code_can ;SNAMRILMLGNSLTTANHMPDMLAELLTAEVRVHARGGARLAEHLNPKTRNGALTQAALANEAWDFVVMQEMSHGPATSP TAYARSVASLSEAAKAAGAQPVIYGTWPYRAGCAKLVKLGMSHDDMSLRMAEAFAQAAADSGALLADVAAPFRAGSADEL YAADGVHPSPAGSRLAALVLAETMGKGIRPW ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier MCSG-APC103766 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASN n 1 3 ALA n 1 4 MSE n 1 5 ARG n 1 6 ILE n 1 7 LEU n 1 8 MSE n 1 9 LEU n 1 10 GLY n 1 11 ASN n 1 12 SER n 1 13 LEU n 1 14 THR n 1 15 THR n 1 16 ALA n 1 17 ASN n 1 18 HIS n 1 19 MSE n 1 20 PRO n 1 21 ASP n 1 22 MSE n 1 23 LEU n 1 24 ALA n 1 25 GLU n 1 26 LEU n 1 27 LEU n 1 28 THR n 1 29 ALA n 1 30 GLU n 1 31 VAL n 1 32 ARG n 1 33 VAL n 1 34 HIS n 1 35 ALA n 1 36 ARG n 1 37 GLY n 1 38 GLY n 1 39 ALA n 1 40 ARG n 1 41 LEU n 1 42 ALA n 1 43 GLU n 1 44 HIS n 1 45 LEU n 1 46 ASN n 1 47 PRO n 1 48 LYS n 1 49 THR n 1 50 ARG n 1 51 ASN n 1 52 GLY n 1 53 ALA n 1 54 LEU n 1 55 THR n 1 56 GLN n 1 57 ALA n 1 58 ALA n 1 59 LEU n 1 60 ALA n 1 61 ASN n 1 62 GLU n 1 63 ALA n 1 64 TRP n 1 65 ASP n 1 66 PHE n 1 67 VAL n 1 68 VAL n 1 69 MSE n 1 70 GLN n 1 71 GLU n 1 72 MSE n 1 73 SER n 1 74 HIS n 1 75 GLY n 1 76 PRO n 1 77 ALA n 1 78 THR n 1 79 SER n 1 80 PRO n 1 81 THR n 1 82 ALA n 1 83 TYR n 1 84 ALA n 1 85 ARG n 1 86 SER n 1 87 VAL n 1 88 ALA n 1 89 SER n 1 90 LEU n 1 91 SER n 1 92 GLU n 1 93 ALA n 1 94 ALA n 1 95 LYS n 1 96 ALA n 1 97 ALA n 1 98 GLY n 1 99 ALA n 1 100 GLN n 1 101 PRO n 1 102 VAL n 1 103 ILE n 1 104 TYR n 1 105 GLY n 1 106 THR n 1 107 TRP n 1 108 PRO n 1 109 TYR n 1 110 ARG n 1 111 ALA n 1 112 GLY n 1 113 CYS n 1 114 ALA n 1 115 LYS n 1 116 LEU n 1 117 VAL n 1 118 LYS n 1 119 LEU n 1 120 GLY n 1 121 MSE n 1 122 SER n 1 123 HIS n 1 124 ASP n 1 125 ASP n 1 126 MSE n 1 127 SER n 1 128 LEU n 1 129 ARG n 1 130 MSE n 1 131 ALA n 1 132 GLU n 1 133 ALA n 1 134 PHE n 1 135 ALA n 1 136 GLN n 1 137 ALA n 1 138 ALA n 1 139 ALA n 1 140 ASP n 1 141 SER n 1 142 GLY n 1 143 ALA n 1 144 LEU n 1 145 LEU n 1 146 ALA n 1 147 ASP n 1 148 VAL n 1 149 ALA n 1 150 ALA n 1 151 PRO n 1 152 PHE n 1 153 ARG n 1 154 ALA n 1 155 GLY n 1 156 SER n 1 157 ALA n 1 158 ASP n 1 159 GLU n 1 160 LEU n 1 161 TYR n 1 162 ALA n 1 163 ALA n 1 164 ASP n 1 165 GLY n 1 166 VAL n 1 167 HIS n 1 168 PRO n 1 169 SER n 1 170 PRO n 1 171 ALA n 1 172 GLY n 1 173 SER n 1 174 ARG n 1 175 LEU n 1 176 ALA n 1 177 ALA n 1 178 LEU n 1 179 VAL n 1 180 LEU n 1 181 ALA n 1 182 GLU n 1 183 THR n 1 184 MSE n 1 185 GLY n 1 186 LYS n 1 187 GLY n 1 188 ILE n 1 189 ARG n 1 190 PRO n 1 191 TRP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene Shel_16390 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'DSM 20476' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Slackia heliotrinireducens DSM 20476' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 471855 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pMCSG68 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code C7N6X3_SLAHD _struct_ref.pdbx_db_accession C7N6X3 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MRILMLGNSLTTANHMPDMLAELLTAEVRVHARGGARLAEHLNPKTRNGALTQAALANEAWDFVVMQEMSHGPATSPTAY ARSVASLSEAAKAAGAQPVIYGTWPYRAGCAKLVKLGMSHDDMSLRMAEAFAQAAADSGALLADVAAPFRAGSADELYAA DGVHPSPAGSRLAALVLAETMGKGIRPW ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4S1P _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 191 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession C7N6X3 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 188 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 188 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4S1P SER A 1 ? UNP C7N6X3 ? ? 'EXPRESSION TAG' -2 1 1 4S1P ASN A 2 ? UNP C7N6X3 ? ? 'EXPRESSION TAG' -1 2 1 4S1P ALA A 3 ? UNP C7N6X3 ? ? 'EXPRESSION TAG' 0 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 UNL non-polymer . 'UNKNOWN LIGAND' ? ? ? VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 4S1P _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.38 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 48.39 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.temp 289 _exptl_crystal_grow.pdbx_details '0.1 M sodium acetate, 1.5 M lithium sulfate, pH 4.6, VAPOR DIFFUSION, SITTING DROP, temperature 289K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2012-05-30 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'double crystal monochromator' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9792 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_wavelength_list 0.9792 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID # _reflns.d_resolution_high 1.450 _reflns.d_resolution_low 35.3 _reflns.number_obs 35098 _reflns.pdbx_Rmerge_I_obs 0.143 _reflns.pdbx_netI_over_sigmaI 12.100 _reflns.pdbx_chi_squared 3.302 _reflns.pdbx_redundancy 6.200 _reflns.percent_possible_obs 98.900 _reflns.entry_id 4S1P _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.number_all 35098 _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate 22.2 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.450 1.480 ? ? ? 0.654 1.95 ? 1.177 3.300 ? 1544 88.900 1 1 1.480 1.500 ? ? ? 0.618 ? ? 1.315 3.600 ? 1647 94.300 2 1 1.500 1.530 ? ? ? 0.525 ? ? 1.481 4.200 ? 1717 98.100 3 1 1.530 1.560 ? ? ? 0.483 ? ? 1.661 5.000 ? 1749 99.800 4 1 1.560 1.600 ? ? ? 0.439 ? ? 1.815 5.400 ? 1734 99.900 5 1 1.600 1.630 ? ? ? 0.400 ? ? 2.080 5.700 ? 1774 100.000 6 1 1.630 1.670 ? ? ? 0.375 ? ? 2.385 6.200 ? 1725 100.000 7 1 1.670 1.720 ? ? ? 0.344 ? ? 2.436 6.800 ? 1749 99.700 8 1 1.720 1.770 ? ? ? 0.318 ? ? 2.692 6.800 ? 1752 99.500 9 1 1.770 1.830 ? ? ? 0.288 ? ? 3.124 6.900 ? 1749 99.900 10 1 1.830 1.890 ? ? ? 0.248 ? ? 3.112 6.900 ? 1745 99.800 11 1 1.890 1.970 ? ? ? 0.220 ? ? 3.135 6.900 ? 1770 99.800 12 1 1.970 2.060 ? ? ? 0.207 ? ? 3.370 6.900 ? 1757 99.900 13 1 2.060 2.170 ? ? ? 0.191 ? ? 3.446 7.000 ? 1787 99.900 14 1 2.170 2.300 ? ? ? 0.178 ? ? 3.780 7.100 ? 1771 100.000 15 1 2.300 2.480 ? ? ? 0.167 ? ? 3.848 7.100 ? 1775 100.000 16 1 2.480 2.730 ? ? ? 0.155 ? ? 3.884 7.200 ? 1795 100.000 17 1 2.730 3.120 ? ? ? 0.133 ? ? 4.242 7.100 ? 1813 100.000 18 1 3.120 3.940 ? ? ? 0.107 ? ? 4.433 7.000 ? 1828 99.900 19 1 3.940 50.000 ? ? ? 0.096 ? ? 7.587 6.500 ? 1917 98.500 20 1 # _refine.entry_id 4S1P _refine.ls_d_res_high 1.4500 _refine.ls_d_res_low 35.3 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 98.5200 _refine.ls_number_reflns_obs 33266 _refine.ls_number_reflns_all 33266 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1195 _refine.ls_R_factor_R_work 0.1176 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.1559 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.0000 _refine.ls_number_reflns_R_free 1769 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 19.3690 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -0.8500 _refine.aniso_B[2][2] -1.2600 _refine.aniso_B[3][3] 2.1100 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][3] -0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9800 _refine.correlation_coeff_Fo_to_Fc_free 0.9700 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.0520 _refine.pdbx_overall_ESU_R_Free 0.0510 _refine.overall_SU_ML 0.0320 _refine.overall_SU_B 1.9090 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 61.320 _refine.B_iso_min 10.290 _refine.pdbx_overall_phase_error ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_ls_sigma_I 0 _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1335 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 9 _refine_hist.number_atoms_solvent 200 _refine_hist.number_atoms_total 1544 _refine_hist.d_res_high 1.4500 _refine_hist.d_res_low 35.3 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 1486 0.012 0.019 ? ? 'X-RAY DIFFRACTION' r_bond_other_d 1439 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 2039 1.538 1.996 ? ? 'X-RAY DIFFRACTION' r_angle_other_deg 3322 0.820 3.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 215 5.383 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 61 36.214 23.279 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 210 12.967 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 13 19.751 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 231 0.090 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 1758 0.008 0.021 ? ? 'X-RAY DIFFRACTION' r_gen_planes_other 337 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 775 1.492 1.586 ? ? 'X-RAY DIFFRACTION' r_mcbond_other 774 1.494 1.581 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 978 1.871 2.391 ? ? 'X-RAY DIFFRACTION' r_rigid_bond_restr 2925 3.230 3.000 ? ? 'X-RAY DIFFRACTION' r_sphericity_free 59 27.833 5.000 ? ? 'X-RAY DIFFRACTION' r_sphericity_bonded 3026 8.210 5.000 ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 1.4470 _refine_ls_shell.d_res_low 1.4850 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 85.5900 _refine_ls_shell.number_reflns_R_work 2098 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2280 _refine_ls_shell.R_factor_R_free 0.2720 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 106 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 2204 _refine_ls_shell.number_reflns_obs 2204 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4S1P _struct.title 'Shel_16390 protein, a putative SGNH hydrolase from Slackia heliotrinireducens' _struct.pdbx_descriptor 'Uncharacterized protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4S1P _struct_keywords.text ;structural genomics, APC103766, SGNH hydrolase, unknown ligand, PSI-Biology, Midwest Center for Structural Genomics, MCSG, HYDROLASE ; _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 11 ? ALA A 16 ? ASN A 8 ALA A 13 1 ? 6 HELX_P HELX_P2 2 HIS A 18 ? THR A 28 ? HIS A 15 THR A 25 1 ? 11 HELX_P HELX_P3 3 ARG A 40 ? ASN A 46 ? ARG A 37 ASN A 43 5 ? 7 HELX_P HELX_P4 4 THR A 49 ? GLU A 62 ? THR A 46 GLU A 59 1 ? 14 HELX_P HELX_P5 5 HIS A 74 ? SER A 79 ? HIS A 71 SER A 76 1 ? 6 HELX_P HELX_P6 6 SER A 79 ? ALA A 97 ? SER A 76 ALA A 94 1 ? 19 HELX_P HELX_P7 7 CYS A 113 ? GLY A 120 ? CYS A 110 GLY A 117 1 ? 8 HELX_P HELX_P8 8 SER A 122 ? GLY A 142 ? SER A 119 GLY A 139 1 ? 21 HELX_P HELX_P9 9 VAL A 148 ? GLY A 155 ? VAL A 145 GLY A 152 1 ? 8 HELX_P HELX_P10 10 SER A 156 ? TYR A 161 ? SER A 153 TYR A 158 1 ? 6 HELX_P HELX_P11 11 SER A 169 ? GLY A 185 ? SER A 166 GLY A 182 1 ? 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A ALA 3 C ? ? ? 1_555 A MSE 4 N ? ? A ALA 0 A MSE 1 1_555 ? ? ? ? ? ? ? 1.330 ? covale2 covale ? ? A MSE 4 C ? ? ? 1_555 A ARG 5 N ? ? A MSE 1 A ARG 2 1_555 ? ? ? ? ? ? ? 1.329 ? covale3 covale ? ? A LEU 7 C ? ? ? 1_555 A MSE 8 N ? ? A LEU 4 A MSE 5 1_555 ? ? ? ? ? ? ? 1.325 ? covale4 covale ? ? A MSE 8 C ? ? ? 1_555 A LEU 9 N ? ? A MSE 5 A LEU 6 1_555 ? ? ? ? ? ? ? 1.325 ? covale5 covale ? ? A HIS 18 C ? ? ? 1_555 A MSE 19 N ? ? A HIS 15 A MSE 16 1_555 ? ? ? ? ? ? ? 1.319 ? covale6 covale ? ? A MSE 19 C ? ? ? 1_555 A PRO 20 N ? ? A MSE 16 A PRO 17 1_555 ? ? ? ? ? ? ? 1.352 ? covale7 covale ? ? A ASP 21 C ? ? ? 1_555 A MSE 22 N ? ? A ASP 18 A MSE 19 1_555 ? ? ? ? ? ? ? 1.326 ? covale8 covale ? ? A MSE 22 C ? ? ? 1_555 A LEU 23 N ? ? A MSE 19 A LEU 20 1_555 ? ? ? ? ? ? ? 1.336 ? covale9 covale ? ? A VAL 68 C ? ? ? 1_555 A MSE 69 N ? ? A VAL 65 A MSE 66 1_555 ? ? ? ? ? ? ? 1.339 ? covale10 covale ? ? A MSE 69 C ? ? ? 1_555 A GLN 70 N ? ? A MSE 66 A GLN 67 1_555 ? ? ? ? ? ? ? 1.342 ? covale11 covale ? ? A GLU 71 C ? ? ? 1_555 A MSE 72 N ? ? A GLU 68 A MSE 69 1_555 ? ? ? ? ? ? ? 1.329 ? covale12 covale ? ? A MSE 72 C ? ? ? 1_555 A SER 73 N ? ? A MSE 69 A SER 70 1_555 ? ? ? ? ? ? ? 1.328 ? covale13 covale ? ? A GLY 120 C ? ? ? 1_555 A MSE 121 N ? ? A GLY 117 A MSE 118 1_555 ? ? ? ? ? ? ? 1.321 ? covale14 covale ? ? A MSE 121 C ? ? ? 1_555 A SER 122 N ? ? A MSE 118 A SER 119 1_555 ? ? ? ? ? ? ? 1.339 ? covale15 covale ? ? A ASP 125 C ? ? ? 1_555 A MSE 126 N ? ? A ASP 122 A MSE 123 1_555 ? ? ? ? ? ? ? 1.329 ? covale16 covale ? ? A MSE 126 C ? ? ? 1_555 A SER 127 N ? ? A MSE 123 A SER 124 1_555 ? ? ? ? ? ? ? 1.329 ? covale17 covale ? ? A ARG 129 C ? ? ? 1_555 A MSE 130 N ? ? A ARG 126 A MSE 127 1_555 ? ? ? ? ? ? ? 1.330 ? covale18 covale ? ? A MSE 130 C ? ? ? 1_555 A ALA 131 N ? ? A MSE 127 A ALA 128 1_555 ? ? ? ? ? ? ? 1.334 ? covale19 covale ? ? A THR 183 C ? ? ? 1_555 A MSE 184 N ? ? A THR 180 A MSE 181 1_555 ? ? ? ? ? ? ? 1.323 ? covale20 covale ? ? A MSE 184 C ? ? ? 1_555 A GLY 185 N ? ? A MSE 181 A GLY 182 1_555 ? ? ? ? ? ? ? 1.319 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ALA A 29 ? ALA A 35 ? ALA A 26 ALA A 32 A 2 MSE A 4 ? GLY A 10 ? MSE A 1 GLY A 7 A 3 PHE A 66 ? MSE A 69 ? PHE A 63 MSE A 66 A 4 GLN A 100 ? GLY A 105 ? GLN A 97 GLY A 102 A 5 LEU A 144 ? ASP A 147 ? LEU A 141 ASP A 144 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O HIS A 34 ? O HIS A 31 N MSE A 8 ? N MSE A 5 A 2 3 N LEU A 7 ? N LEU A 4 O VAL A 68 ? O VAL A 65 A 3 4 N MSE A 69 ? N MSE A 66 O VAL A 102 ? O VAL A 99 A 4 5 N ILE A 103 ? N ILE A 100 O LEU A 144 ? O LEU A 141 # _atom_sites.entry_id 4S1P _atom_sites.fract_transf_matrix[1][1] 0.024636 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014920 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013977 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 -2 ? ? ? A . n A 1 2 ASN 2 -1 -1 ASN ASN A . n A 1 3 ALA 3 0 0 ALA ALA A . n A 1 4 MSE 4 1 1 MSE MSE A . n A 1 5 ARG 5 2 2 ARG ARG A . n A 1 6 ILE 6 3 3 ILE ILE A . n A 1 7 LEU 7 4 4 LEU LEU A . n A 1 8 MSE 8 5 5 MSE MSE A . n A 1 9 LEU 9 6 6 LEU LEU A . n A 1 10 GLY 10 7 7 GLY GLY A . n A 1 11 ASN 11 8 8 ASN ASN A . n A 1 12 SER 12 9 9 SER SER A . n A 1 13 LEU 13 10 10 LEU LEU A . n A 1 14 THR 14 11 11 THR THR A . n A 1 15 THR 15 12 12 THR THR A . n A 1 16 ALA 16 13 13 ALA ALA A . n A 1 17 ASN 17 14 14 ASN ASN A . n A 1 18 HIS 18 15 15 HIS HIS A . n A 1 19 MSE 19 16 16 MSE MSE A . n A 1 20 PRO 20 17 17 PRO PRO A . n A 1 21 ASP 21 18 18 ASP ASP A . n A 1 22 MSE 22 19 19 MSE MSE A . n A 1 23 LEU 23 20 20 LEU LEU A . n A 1 24 ALA 24 21 21 ALA ALA A . n A 1 25 GLU 25 22 22 GLU GLU A . n A 1 26 LEU 26 23 23 LEU LEU A . n A 1 27 LEU 27 24 24 LEU LEU A . n A 1 28 THR 28 25 25 THR THR A . n A 1 29 ALA 29 26 26 ALA ALA A . n A 1 30 GLU 30 27 27 GLU GLU A . n A 1 31 VAL 31 28 28 VAL VAL A . n A 1 32 ARG 32 29 29 ARG ARG A . n A 1 33 VAL 33 30 30 VAL VAL A . n A 1 34 HIS 34 31 31 HIS HIS A . n A 1 35 ALA 35 32 32 ALA ALA A . n A 1 36 ARG 36 33 33 ARG ARG A . n A 1 37 GLY 37 34 34 GLY GLY A . n A 1 38 GLY 38 35 35 GLY GLY A . n A 1 39 ALA 39 36 36 ALA ALA A . n A 1 40 ARG 40 37 37 ARG ARG A . n A 1 41 LEU 41 38 38 LEU LEU A . n A 1 42 ALA 42 39 39 ALA ALA A . n A 1 43 GLU 43 40 40 GLU GLU A . n A 1 44 HIS 44 41 41 HIS HIS A . n A 1 45 LEU 45 42 42 LEU LEU A . n A 1 46 ASN 46 43 43 ASN ASN A . n A 1 47 PRO 47 44 44 PRO PRO A . n A 1 48 LYS 48 45 45 LYS LYS A . n A 1 49 THR 49 46 46 THR THR A . n A 1 50 ARG 50 47 47 ARG ARG A . n A 1 51 ASN 51 48 48 ASN ASN A . n A 1 52 GLY 52 49 49 GLY GLY A . n A 1 53 ALA 53 50 50 ALA ALA A . n A 1 54 LEU 54 51 51 LEU LEU A . n A 1 55 THR 55 52 52 THR THR A . n A 1 56 GLN 56 53 53 GLN GLN A . n A 1 57 ALA 57 54 54 ALA ALA A . n A 1 58 ALA 58 55 55 ALA ALA A . n A 1 59 LEU 59 56 56 LEU LEU A . n A 1 60 ALA 60 57 57 ALA ALA A . n A 1 61 ASN 61 58 58 ASN ASN A . n A 1 62 GLU 62 59 59 GLU GLU A . n A 1 63 ALA 63 60 60 ALA ALA A . n A 1 64 TRP 64 61 61 TRP TRP A . n A 1 65 ASP 65 62 62 ASP ASP A . n A 1 66 PHE 66 63 63 PHE PHE A . n A 1 67 VAL 67 64 64 VAL VAL A . n A 1 68 VAL 68 65 65 VAL VAL A . n A 1 69 MSE 69 66 66 MSE MSE A . n A 1 70 GLN 70 67 67 GLN GLN A . n A 1 71 GLU 71 68 68 GLU GLU A . n A 1 72 MSE 72 69 69 MSE MSE A . n A 1 73 SER 73 70 70 SER SER A . n A 1 74 HIS 74 71 71 HIS HIS A . n A 1 75 GLY 75 72 72 GLY GLY A . n A 1 76 PRO 76 73 73 PRO PRO A . n A 1 77 ALA 77 74 74 ALA ALA A . n A 1 78 THR 78 75 75 THR THR A . n A 1 79 SER 79 76 76 SER SER A . n A 1 80 PRO 80 77 77 PRO PRO A . n A 1 81 THR 81 78 78 THR THR A . n A 1 82 ALA 82 79 79 ALA ALA A . n A 1 83 TYR 83 80 80 TYR TYR A . n A 1 84 ALA 84 81 81 ALA ALA A . n A 1 85 ARG 85 82 82 ARG ARG A . n A 1 86 SER 86 83 83 SER SER A . n A 1 87 VAL 87 84 84 VAL VAL A . n A 1 88 ALA 88 85 85 ALA ALA A . n A 1 89 SER 89 86 86 SER SER A . n A 1 90 LEU 90 87 87 LEU LEU A . n A 1 91 SER 91 88 88 SER SER A . n A 1 92 GLU 92 89 89 GLU GLU A . n A 1 93 ALA 93 90 90 ALA ALA A . n A 1 94 ALA 94 91 91 ALA ALA A . n A 1 95 LYS 95 92 92 LYS LYS A . n A 1 96 ALA 96 93 93 ALA ALA A . n A 1 97 ALA 97 94 94 ALA ALA A . n A 1 98 GLY 98 95 95 GLY GLY A . n A 1 99 ALA 99 96 96 ALA ALA A . n A 1 100 GLN 100 97 97 GLN GLN A . n A 1 101 PRO 101 98 98 PRO PRO A . n A 1 102 VAL 102 99 99 VAL VAL A . n A 1 103 ILE 103 100 100 ILE ILE A . n A 1 104 TYR 104 101 101 TYR TYR A . n A 1 105 GLY 105 102 102 GLY GLY A . n A 1 106 THR 106 103 103 THR THR A . n A 1 107 TRP 107 104 104 TRP TRP A . n A 1 108 PRO 108 105 105 PRO PRO A . n A 1 109 TYR 109 106 106 TYR TYR A . n A 1 110 ARG 110 107 107 ARG ARG A . n A 1 111 ALA 111 108 108 ALA ALA A . n A 1 112 GLY 112 109 109 GLY GLY A . n A 1 113 CYS 113 110 110 CYS CYS A . n A 1 114 ALA 114 111 111 ALA ALA A . n A 1 115 LYS 115 112 112 LYS LYS A . n A 1 116 LEU 116 113 113 LEU LEU A . n A 1 117 VAL 117 114 114 VAL VAL A . n A 1 118 LYS 118 115 115 LYS LYS A . n A 1 119 LEU 119 116 116 LEU LEU A . n A 1 120 GLY 120 117 117 GLY GLY A . n A 1 121 MSE 121 118 118 MSE MSE A . n A 1 122 SER 122 119 119 SER SER A . n A 1 123 HIS 123 120 120 HIS HIS A . n A 1 124 ASP 124 121 121 ASP ASP A . n A 1 125 ASP 125 122 122 ASP ASP A . n A 1 126 MSE 126 123 123 MSE MSE A . n A 1 127 SER 127 124 124 SER SER A . n A 1 128 LEU 128 125 125 LEU LEU A . n A 1 129 ARG 129 126 126 ARG ARG A . n A 1 130 MSE 130 127 127 MSE MSE A . n A 1 131 ALA 131 128 128 ALA ALA A . n A 1 132 GLU 132 129 129 GLU GLU A . n A 1 133 ALA 133 130 130 ALA ALA A . n A 1 134 PHE 134 131 131 PHE PHE A . n A 1 135 ALA 135 132 132 ALA ALA A . n A 1 136 GLN 136 133 133 GLN GLN A . n A 1 137 ALA 137 134 134 ALA ALA A . n A 1 138 ALA 138 135 135 ALA ALA A . n A 1 139 ALA 139 136 136 ALA ALA A . n A 1 140 ASP 140 137 137 ASP ASP A . n A 1 141 SER 141 138 138 SER SER A . n A 1 142 GLY 142 139 139 GLY GLY A . n A 1 143 ALA 143 140 140 ALA ALA A . n A 1 144 LEU 144 141 141 LEU LEU A . n A 1 145 LEU 145 142 142 LEU LEU A . n A 1 146 ALA 146 143 143 ALA ALA A . n A 1 147 ASP 147 144 144 ASP ASP A . n A 1 148 VAL 148 145 145 VAL VAL A . n A 1 149 ALA 149 146 146 ALA ALA A . n A 1 150 ALA 150 147 147 ALA ALA A . n A 1 151 PRO 151 148 148 PRO PRO A . n A 1 152 PHE 152 149 149 PHE PHE A . n A 1 153 ARG 153 150 150 ARG ARG A . n A 1 154 ALA 154 151 151 ALA ALA A . n A 1 155 GLY 155 152 152 GLY GLY A . n A 1 156 SER 156 153 153 SER SER A . n A 1 157 ALA 157 154 154 ALA ALA A . n A 1 158 ASP 158 155 155 ASP ASP A . n A 1 159 GLU 159 156 156 GLU GLU A . n A 1 160 LEU 160 157 157 LEU LEU A . n A 1 161 TYR 161 158 158 TYR TYR A . n A 1 162 ALA 162 159 159 ALA ALA A . n A 1 163 ALA 163 160 160 ALA ALA A . n A 1 164 ASP 164 161 161 ASP ASP A . n A 1 165 GLY 165 162 162 GLY GLY A . n A 1 166 VAL 166 163 163 VAL VAL A . n A 1 167 HIS 167 164 164 HIS HIS A . n A 1 168 PRO 168 165 165 PRO PRO A . n A 1 169 SER 169 166 166 SER SER A . n A 1 170 PRO 170 167 167 PRO PRO A . n A 1 171 ALA 171 168 168 ALA ALA A . n A 1 172 GLY 172 169 169 GLY GLY A . n A 1 173 SER 173 170 170 SER SER A . n A 1 174 ARG 174 171 171 ARG ARG A . n A 1 175 LEU 175 172 172 LEU LEU A . n A 1 176 ALA 176 173 173 ALA ALA A . n A 1 177 ALA 177 174 174 ALA ALA A . n A 1 178 LEU 178 175 175 LEU LEU A . n A 1 179 VAL 179 176 176 VAL VAL A . n A 1 180 LEU 180 177 177 LEU LEU A . n A 1 181 ALA 181 178 178 ALA ALA A . n A 1 182 GLU 182 179 179 GLU GLU A . n A 1 183 THR 183 180 180 THR THR A . n A 1 184 MSE 184 181 181 MSE MSE A . n A 1 185 GLY 185 182 182 GLY GLY A . n A 1 186 LYS 186 183 ? ? ? A . n A 1 187 GLY 187 184 ? ? ? A . n A 1 188 ILE 188 185 ? ? ? A . n A 1 189 ARG 189 186 ? ? ? A . n A 1 190 PRO 190 187 ? ? ? A . n A 1 191 TRP 191 188 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name PSI:Biology _pdbx_SG_project.full_name_of_center 'Midwest Center for Structural Genomics' _pdbx_SG_project.initial_of_center MCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 UNL 1 501 501 UNL UNL A . C 3 HOH 1 601 1 HOH HOH A . C 3 HOH 2 602 2 HOH HOH A . C 3 HOH 3 603 3 HOH HOH A . C 3 HOH 4 604 4 HOH HOH A . C 3 HOH 5 605 5 HOH HOH A . C 3 HOH 6 606 6 HOH HOH A . C 3 HOH 7 607 7 HOH HOH A . C 3 HOH 8 608 8 HOH HOH A . C 3 HOH 9 609 9 HOH HOH A . C 3 HOH 10 610 10 HOH HOH A . C 3 HOH 11 611 11 HOH HOH A . C 3 HOH 12 612 12 HOH HOH A . C 3 HOH 13 613 13 HOH HOH A . C 3 HOH 14 614 14 HOH HOH A . C 3 HOH 15 615 15 HOH HOH A . C 3 HOH 16 616 16 HOH HOH A . C 3 HOH 17 617 17 HOH HOH A . C 3 HOH 18 618 18 HOH HOH A . C 3 HOH 19 619 19 HOH HOH A . C 3 HOH 20 620 20 HOH HOH A . C 3 HOH 21 621 21 HOH HOH A . C 3 HOH 22 622 22 HOH HOH A . C 3 HOH 23 623 23 HOH HOH A . C 3 HOH 24 624 24 HOH HOH A . C 3 HOH 25 625 25 HOH HOH A . C 3 HOH 26 626 26 HOH HOH A . C 3 HOH 27 627 27 HOH HOH A . C 3 HOH 28 628 28 HOH HOH A . C 3 HOH 29 629 29 HOH HOH A . C 3 HOH 30 630 30 HOH HOH A . C 3 HOH 31 631 31 HOH HOH A . C 3 HOH 32 632 32 HOH HOH A . C 3 HOH 33 633 33 HOH HOH A . C 3 HOH 34 634 34 HOH HOH A . C 3 HOH 35 635 35 HOH HOH A . C 3 HOH 36 636 36 HOH HOH A . C 3 HOH 37 637 37 HOH HOH A . C 3 HOH 38 638 38 HOH HOH A . C 3 HOH 39 639 39 HOH HOH A . C 3 HOH 40 640 40 HOH HOH A . C 3 HOH 41 641 41 HOH HOH A . C 3 HOH 42 642 42 HOH HOH A . C 3 HOH 43 643 43 HOH HOH A . C 3 HOH 44 644 44 HOH HOH A . C 3 HOH 45 645 45 HOH HOH A . C 3 HOH 46 646 46 HOH HOH A . C 3 HOH 47 647 47 HOH HOH A . C 3 HOH 48 648 48 HOH HOH A . C 3 HOH 49 649 49 HOH HOH A . C 3 HOH 50 650 50 HOH HOH A . C 3 HOH 51 651 51 HOH HOH A . C 3 HOH 52 652 52 HOH HOH A . C 3 HOH 53 653 53 HOH HOH A . C 3 HOH 54 654 54 HOH HOH A . C 3 HOH 55 655 55 HOH HOH A . C 3 HOH 56 656 56 HOH HOH A . C 3 HOH 57 657 57 HOH HOH A . C 3 HOH 58 658 58 HOH HOH A . C 3 HOH 59 659 59 HOH HOH A . C 3 HOH 60 660 60 HOH HOH A . C 3 HOH 61 661 61 HOH HOH A . C 3 HOH 62 662 62 HOH HOH A . C 3 HOH 63 663 63 HOH HOH A . C 3 HOH 64 664 64 HOH HOH A . C 3 HOH 65 665 65 HOH HOH A . C 3 HOH 66 666 66 HOH HOH A . C 3 HOH 67 667 67 HOH HOH A . C 3 HOH 68 668 68 HOH HOH A . C 3 HOH 69 669 69 HOH HOH A . C 3 HOH 70 670 70 HOH HOH A . C 3 HOH 71 671 71 HOH HOH A . C 3 HOH 72 672 72 HOH HOH A . C 3 HOH 73 673 73 HOH HOH A . C 3 HOH 74 674 74 HOH HOH A . C 3 HOH 75 675 75 HOH HOH A . C 3 HOH 76 676 76 HOH HOH A . C 3 HOH 77 677 77 HOH HOH A . C 3 HOH 78 678 78 HOH HOH A . C 3 HOH 79 679 79 HOH HOH A . C 3 HOH 80 680 80 HOH HOH A . C 3 HOH 81 681 81 HOH HOH A . C 3 HOH 82 682 82 HOH HOH A . C 3 HOH 83 683 83 HOH HOH A . C 3 HOH 84 684 84 HOH HOH A . C 3 HOH 85 685 85 HOH HOH A . C 3 HOH 86 686 86 HOH HOH A . C 3 HOH 87 687 87 HOH HOH A . C 3 HOH 88 688 88 HOH HOH A . C 3 HOH 89 689 89 HOH HOH A . C 3 HOH 90 690 90 HOH HOH A . C 3 HOH 91 691 91 HOH HOH A . C 3 HOH 92 692 92 HOH HOH A . C 3 HOH 93 693 93 HOH HOH A . C 3 HOH 94 694 94 HOH HOH A . C 3 HOH 95 695 95 HOH HOH A . C 3 HOH 96 696 96 HOH HOH A . C 3 HOH 97 697 97 HOH HOH A . C 3 HOH 98 698 98 HOH HOH A . C 3 HOH 99 699 99 HOH HOH A . C 3 HOH 100 700 100 HOH HOH A . C 3 HOH 101 701 101 HOH HOH A . C 3 HOH 102 702 102 HOH HOH A . C 3 HOH 103 703 103 HOH HOH A . C 3 HOH 104 704 104 HOH HOH A . C 3 HOH 105 705 105 HOH HOH A . C 3 HOH 106 706 106 HOH HOH A . C 3 HOH 107 707 107 HOH HOH A . C 3 HOH 108 708 108 HOH HOH A . C 3 HOH 109 709 109 HOH HOH A . C 3 HOH 110 710 110 HOH HOH A . C 3 HOH 111 711 111 HOH HOH A . C 3 HOH 112 712 112 HOH HOH A . C 3 HOH 113 713 113 HOH HOH A . C 3 HOH 114 714 114 HOH HOH A . C 3 HOH 115 715 115 HOH HOH A . C 3 HOH 116 716 116 HOH HOH A . C 3 HOH 117 717 117 HOH HOH A . C 3 HOH 118 718 118 HOH HOH A . C 3 HOH 119 719 119 HOH HOH A . C 3 HOH 120 720 120 HOH HOH A . C 3 HOH 121 721 121 HOH HOH A . C 3 HOH 122 722 122 HOH HOH A . C 3 HOH 123 723 123 HOH HOH A . C 3 HOH 124 724 124 HOH HOH A . C 3 HOH 125 725 125 HOH HOH A . C 3 HOH 126 726 126 HOH HOH A . C 3 HOH 127 727 127 HOH HOH A . C 3 HOH 128 728 128 HOH HOH A . C 3 HOH 129 729 129 HOH HOH A . C 3 HOH 130 730 130 HOH HOH A . C 3 HOH 131 731 131 HOH HOH A . C 3 HOH 132 732 132 HOH HOH A . C 3 HOH 133 733 133 HOH HOH A . C 3 HOH 134 734 134 HOH HOH A . C 3 HOH 135 735 135 HOH HOH A . C 3 HOH 136 736 136 HOH HOH A . C 3 HOH 137 737 137 HOH HOH A . C 3 HOH 138 738 138 HOH HOH A . C 3 HOH 139 739 139 HOH HOH A . C 3 HOH 140 740 140 HOH HOH A . C 3 HOH 141 741 141 HOH HOH A . C 3 HOH 142 742 142 HOH HOH A . C 3 HOH 143 743 143 HOH HOH A . C 3 HOH 144 744 144 HOH HOH A . C 3 HOH 145 745 145 HOH HOH A . C 3 HOH 146 746 146 HOH HOH A . C 3 HOH 147 747 147 HOH HOH A . C 3 HOH 148 748 148 HOH HOH A . C 3 HOH 149 749 149 HOH HOH A . C 3 HOH 150 750 150 HOH HOH A . C 3 HOH 151 751 151 HOH HOH A . C 3 HOH 152 752 152 HOH HOH A . C 3 HOH 153 753 153 HOH HOH A . C 3 HOH 154 754 154 HOH HOH A . C 3 HOH 155 755 155 HOH HOH A . C 3 HOH 156 756 156 HOH HOH A . C 3 HOH 157 757 157 HOH HOH A . C 3 HOH 158 758 158 HOH HOH A . C 3 HOH 159 759 159 HOH HOH A . C 3 HOH 160 760 160 HOH HOH A . C 3 HOH 161 761 161 HOH HOH A . C 3 HOH 162 762 162 HOH HOH A . C 3 HOH 163 763 163 HOH HOH A . C 3 HOH 164 764 164 HOH HOH A . C 3 HOH 165 765 165 HOH HOH A . C 3 HOH 166 766 166 HOH HOH A . C 3 HOH 167 767 167 HOH HOH A . C 3 HOH 168 768 168 HOH HOH A . C 3 HOH 169 769 169 HOH HOH A . C 3 HOH 170 770 170 HOH HOH A . C 3 HOH 171 771 171 HOH HOH A . C 3 HOH 172 772 172 HOH HOH A . C 3 HOH 173 773 173 HOH HOH A . C 3 HOH 174 774 174 HOH HOH A . C 3 HOH 175 775 175 HOH HOH A . C 3 HOH 176 776 176 HOH HOH A . C 3 HOH 177 777 177 HOH HOH A . C 3 HOH 178 778 178 HOH HOH A . C 3 HOH 179 779 179 HOH HOH A . C 3 HOH 180 780 180 HOH HOH A . C 3 HOH 181 781 181 HOH HOH A . C 3 HOH 182 782 182 HOH HOH A . C 3 HOH 183 783 183 HOH HOH A . C 3 HOH 184 784 184 HOH HOH A . C 3 HOH 185 785 185 HOH HOH A . C 3 HOH 186 786 186 HOH HOH A . C 3 HOH 187 787 187 HOH HOH A . C 3 HOH 188 788 188 HOH HOH A . C 3 HOH 189 789 189 HOH HOH A . C 3 HOH 190 790 190 HOH HOH A . C 3 HOH 191 791 191 HOH HOH A . C 3 HOH 192 792 192 HOH HOH A . C 3 HOH 193 793 193 HOH HOH A . C 3 HOH 194 794 194 HOH HOH A . C 3 HOH 195 795 195 HOH HOH A . C 3 HOH 196 796 196 HOH HOH A . C 3 HOH 197 797 197 HOH HOH A . C 3 HOH 198 798 198 HOH HOH A . C 3 HOH 199 799 199 HOH HOH A . C 3 HOH 200 800 200 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 4 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 8 A MSE 5 ? MET SELENOMETHIONINE 3 A MSE 19 A MSE 16 ? MET SELENOMETHIONINE 4 A MSE 22 A MSE 19 ? MET SELENOMETHIONINE 5 A MSE 69 A MSE 66 ? MET SELENOMETHIONINE 6 A MSE 72 A MSE 69 ? MET SELENOMETHIONINE 7 A MSE 121 A MSE 118 ? MET SELENOMETHIONINE 8 A MSE 126 A MSE 123 ? MET SELENOMETHIONINE 9 A MSE 130 A MSE 127 ? MET SELENOMETHIONINE 10 A MSE 184 A MSE 181 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-01-28 2 'Structure model' 1 1 2017-11-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 2 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 REFMAC 5.8.0073 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 4 PDB_EXTRACT 3.15 'July. 29, 2014' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 SBC-Collect . ? ? ? ? 'data collection' ? ? ? 6 HKL-3000 . ? ? ? ? 'data reduction' ? ? ? 7 HKL-3000 . ? ? ? ? 'data scaling' ? ? ? 8 SHELXCD . ? ? ? ? phasing ? ? ? 9 SHELXD . ? ? ? ? phasing ? ? ? 10 MLPHARE . ? ? ? ? phasing ? ? ? 11 DM . ? ? ? ? phasing ? ? ? 12 SOLVE . ? ? ? ? phasing ? ? ? 13 RESOLVE . ? ? ? ? phasing ? ? ? 14 HKL-3000 . ? ? ? ? phasing ? ? ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 793 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 796 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.18 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 8 ? ? -139.87 -152.64 2 1 VAL A 163 ? ? -122.13 -55.29 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER -2 ? A SER 1 2 1 Y 1 A LYS 183 ? A LYS 186 3 1 Y 1 A GLY 184 ? A GLY 187 4 1 Y 1 A ILE 185 ? A ILE 188 5 1 Y 1 A ARG 186 ? A ARG 189 6 1 Y 1 A PRO 187 ? A PRO 190 7 1 Y 1 A TRP 188 ? A TRP 191 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'UNKNOWN LIGAND' UNL 3 water HOH #