data_4US7 # _entry.id 4US7 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4US7 PDBE EBI-61167 WWPDB D_1290061167 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4US7 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2014-07-03 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Gorgel, M.' 1 'Boeggild, A.' 2 'Ulstrup, J.J.' 3 'Mueller, U.' 4 'Weiss, M.' 5 'Nissen, P.' 6 'Boesen, T.' 7 # _citation.id primary _citation.title 'High-Resolution Structure of a Type Iv Pilin from the Metal- Reducing Bacterium Shewanella Oneidensis.' _citation.journal_abbrev 'Bmc Struct.Biol.' _citation.journal_volume 15 _citation.page_first 4 _citation.page_last ? _citation.year 2015 _citation.journal_id_ASTM ? _citation.country UK _citation.journal_id_ISSN 1472-6807 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 25886849 _citation.pdbx_database_id_DOI 10.1186/S12900-015-0031-7 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Gorgel, M.' 1 primary 'Ulstrup, J.J.' 2 primary 'Boggild, A.' 3 primary 'Jones, N.C.' 4 primary 'Hoffmann, S.V.' 5 primary 'Nissen, P.' 6 primary 'Boesen, T.' 7 # _cell.entry_id 4US7 _cell.length_a 48.830 _cell.length_b 96.550 _cell.length_c 109.760 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4US7 _symmetry.space_group_name_H-M 'I 2 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'PILD PROCESSED PROTEIN' 9913.945 2 ? ? 'UNP RESIDUES 36-123' 'CYSTEINE BRIDGE BETWEEN CYS69 AND CYS86 IN CHAIN A CYSTEINE BRIDGE BETWEEN CYS69 AND CYS86 IN CHAIN B' 2 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 3 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 4 water nat water 18.015 125 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'TYPE IV PILUS PROTEIN' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GKQGRRFDAQQYLVTSAQALERHYSRNGLYPASQSLANSPYYSFSYTPTADKFGFSLKAVPTNRQSDPCGTLSLDHKGVR VPATNCWSH ; _entity_poly.pdbx_seq_one_letter_code_can ;GKQGRRFDAQQYLVTSAQALERHYSRNGLYPASQSLANSPYYSFSYTPTADKFGFSLKAVPTNRQSDPCGTLSLDHKGVR VPATNCWSH ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 LYS n 1 3 GLN n 1 4 GLY n 1 5 ARG n 1 6 ARG n 1 7 PHE n 1 8 ASP n 1 9 ALA n 1 10 GLN n 1 11 GLN n 1 12 TYR n 1 13 LEU n 1 14 VAL n 1 15 THR n 1 16 SER n 1 17 ALA n 1 18 GLN n 1 19 ALA n 1 20 LEU n 1 21 GLU n 1 22 ARG n 1 23 HIS n 1 24 TYR n 1 25 SER n 1 26 ARG n 1 27 ASN n 1 28 GLY n 1 29 LEU n 1 30 TYR n 1 31 PRO n 1 32 ALA n 1 33 SER n 1 34 GLN n 1 35 SER n 1 36 LEU n 1 37 ALA n 1 38 ASN n 1 39 SER n 1 40 PRO n 1 41 TYR n 1 42 TYR n 1 43 SER n 1 44 PHE n 1 45 SER n 1 46 TYR n 1 47 THR n 1 48 PRO n 1 49 THR n 1 50 ALA n 1 51 ASP n 1 52 LYS n 1 53 PHE n 1 54 GLY n 1 55 PHE n 1 56 SER n 1 57 LEU n 1 58 LYS n 1 59 ALA n 1 60 VAL n 1 61 PRO n 1 62 THR n 1 63 ASN n 1 64 ARG n 1 65 GLN n 1 66 SER n 1 67 ASP n 1 68 PRO n 1 69 CYS n 1 70 GLY n 1 71 THR n 1 72 LEU n 1 73 SER n 1 74 LEU n 1 75 ASP n 1 76 HIS n 1 77 LYS n 1 78 GLY n 1 79 VAL n 1 80 ARG n 1 81 VAL n 1 82 PRO n 1 83 ALA n 1 84 THR n 1 85 ASN n 1 86 CYS n 1 87 TRP n 1 88 SER n 1 89 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain MR-1 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'SHEWANELLA ONEIDENSIS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 211586 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ORIGAMI _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8EII5_SHEON _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession Q8EII5 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4US7 A 2 ? 89 ? Q8EII5 36 ? 123 ? 2 89 2 1 4US7 B 2 ? 89 ? Q8EII5 36 ? 123 ? 2 89 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4US7 GLY A 1 ? UNP Q8EII5 ? ? 'cloning artifact' 1 1 2 4US7 GLY B 1 ? UNP Q8EII5 ? ? 'cloning artifact' 1 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4US7 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.27 _exptl_crystal.density_percent_sol 62.4 _exptl_crystal.description 'DATA WERE COLLECTED FOR SULFUR SAD' # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '28% PEG 8K 100 MM TAPS PH 8.0 150 MM AMS' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.pdbx_collection_date 2014-01-24 _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SI-111 CRYSTAL' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.8 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'BESSY BEAMLINE 14.1' _diffrn_source.pdbx_synchrotron_site BESSY _diffrn_source.pdbx_synchrotron_beamline 14.1 _diffrn_source.pdbx_wavelength 1.8 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4US7 _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 48.80 _reflns.d_resolution_high 1.96 _reflns.number_obs 34976 _reflns.number_all ? _reflns.percent_possible_obs 97.1 _reflns.pdbx_Rmerge_I_obs 0.04 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 51.72 _reflns.B_iso_Wilson_estimate 27.36 _reflns.pdbx_redundancy 17.5 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.96 _reflns_shell.d_res_low 2.01 _reflns_shell.percent_possible_all 94.9 _reflns_shell.Rmerge_I_obs 0.08 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 21.15 _reflns_shell.pdbx_redundancy 13.9 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4US7 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 34971 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.46 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 48.275 _refine.ls_d_res_high 1.960 _refine.ls_percent_reflns_obs 97.11 _refine.ls_R_factor_obs 0.1835 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1794 _refine.ls_R_factor_R_free 0.2201 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 9.9 _refine.ls_number_reflns_R_free 3473 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 34.6 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model NONE _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.18 _refine.pdbx_overall_phase_error 21.37 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1400 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 6 _refine_hist.number_atoms_solvent 125 _refine_hist.number_atoms_total 1531 _refine_hist.d_res_high 1.960 _refine_hist.d_res_low 48.275 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.006 ? ? 1450 'X-RAY DIFFRACTION' ? f_angle_d 1.021 ? ? 1969 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 11.822 ? ? 525 'X-RAY DIFFRACTION' ? f_chiral_restr 0.045 ? ? 201 'X-RAY DIFFRACTION' ? f_plane_restr 0.005 ? ? 261 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all 'X-RAY DIFFRACTION' . 1.9599 1.9868 1220 0.1667 95.00 0.2322 . . 137 . . 'X-RAY DIFFRACTION' . 1.9868 2.0152 1244 0.1696 95.00 0.2032 . . 135 . . 'X-RAY DIFFRACTION' . 2.0152 2.0453 1208 0.1669 95.00 0.1878 . . 136 . . 'X-RAY DIFFRACTION' . 2.0453 2.0772 1241 0.1775 95.00 0.2436 . . 133 . . 'X-RAY DIFFRACTION' . 2.0772 2.1113 1206 0.1850 93.00 0.2271 . . 138 . . 'X-RAY DIFFRACTION' . 2.1113 2.1477 1257 0.1875 96.00 0.2208 . . 139 . . 'X-RAY DIFFRACTION' . 2.1477 2.1867 1213 0.1814 95.00 0.2698 . . 137 . . 'X-RAY DIFFRACTION' . 2.1867 2.2288 1228 0.1793 95.00 0.1941 . . 136 . . 'X-RAY DIFFRACTION' . 2.2288 2.2743 1233 0.1843 96.00 0.2444 . . 132 . . 'X-RAY DIFFRACTION' . 2.2743 2.3237 1244 0.1913 95.00 0.2968 . . 136 . . 'X-RAY DIFFRACTION' . 2.3237 2.3778 1275 0.1925 98.00 0.2230 . . 138 . . 'X-RAY DIFFRACTION' . 2.3778 2.4373 1238 0.1848 95.00 0.2450 . . 139 . . 'X-RAY DIFFRACTION' . 2.4373 2.5032 1271 0.2061 98.00 0.2758 . . 134 . . 'X-RAY DIFFRACTION' . 2.5032 2.5768 1274 0.2026 96.00 0.2574 . . 143 . . 'X-RAY DIFFRACTION' . 2.5768 2.6600 1290 0.2018 99.00 0.2525 . . 144 . . 'X-RAY DIFFRACTION' . 2.6600 2.7550 1261 0.1905 97.00 0.2279 . . 138 . . 'X-RAY DIFFRACTION' . 2.7550 2.8653 1277 0.2085 98.00 0.2815 . . 141 . . 'X-RAY DIFFRACTION' . 2.8653 2.9957 1264 0.1928 99.00 0.2264 . . 141 . . 'X-RAY DIFFRACTION' . 2.9957 3.1536 1277 0.2008 99.00 0.2300 . . 143 . . 'X-RAY DIFFRACTION' . 3.1536 3.3512 1300 0.1913 99.00 0.2203 . . 139 . . 'X-RAY DIFFRACTION' . 3.3512 3.6098 1274 0.1787 99.00 0.1993 . . 139 . . 'X-RAY DIFFRACTION' . 3.6098 3.9730 1311 0.1641 100.00 0.2124 . . 143 . . 'X-RAY DIFFRACTION' . 3.9730 4.5475 1297 0.1543 100.00 0.1937 . . 142 . . 'X-RAY DIFFRACTION' . 4.5475 5.7279 1290 0.1529 100.00 0.1769 . . 146 . . 'X-RAY DIFFRACTION' . 5.7279 48.2896 1305 0.1698 100.00 0.1966 . . 144 . . # _struct.entry_id 4US7 _struct.title 'Sulfur SAD Phased Structure of a Type IV Pilus Protein from Shewanella oneidensis' _struct.pdbx_descriptor 'PILD PROCESSED PROTEIN' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4US7 _struct_keywords.pdbx_keywords 'CELL ADHESION' _struct_keywords.text 'CELL ADHESION, TYPE IV PILIN, SULFUR SAD, STRUCTURAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 4 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 1 ? GLY A 28 ? GLY A 1 GLY A 28 1 ? 28 HELX_P HELX_P2 2 GLY B 1 ? GLY B 28 ? GLY B 1 GLY B 28 1 ? 28 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 69 SG ? ? ? 1_555 A CYS 86 SG ? ? A CYS 69 A CYS 86 1_555 ? ? ? ? ? ? ? 2.047 ? disulf2 disulf ? ? B CYS 69 SG ? ? ? 1_555 B CYS 86 SG ? ? B CYS 69 B CYS 86 1_555 ? ? ? ? ? ? ? 2.040 ? metalc1 metalc ? ? D NA . NA ? ? ? 1_555 B LEU 36 O ? ? B NA 1091 B LEU 36 1_555 ? ? ? ? ? ? ? 2.595 ? metalc2 metalc ? ? D NA . NA ? ? ? 1_555 B PHE 44 O ? ? B NA 1091 B PHE 44 1_555 ? ? ? ? ? ? ? 2.441 ? metalc3 metalc ? ? D NA . NA ? ? ? 1_555 B ASN 38 OD1 ? ? B NA 1091 B ASN 38 1_555 ? ? ? ? ? ? ? 2.546 ? metalc4 metalc ? ? D NA . NA ? ? ? 1_555 F HOH . O ? ? B NA 1091 B HOH 2024 1_555 ? ? ? ? ? ? ? 2.572 ? metalc5 metalc ? ? D NA . NA ? ? ? 1_555 F HOH . O ? ? B NA 1091 B HOH 2021 1_555 ? ? ? ? ? ? ? 2.531 ? metalc6 metalc ? ? D NA . NA ? ? ? 1_555 F HOH . O ? ? B NA 1091 B HOH 2022 1_555 ? ? ? ? ? ? ? 2.504 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 VAL 81 A . ? VAL 81 A PRO 82 A ? PRO 82 A 1 -6.91 2 VAL 81 B . ? VAL 81 B PRO 82 B ? PRO 82 B 1 -5.39 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 4 ? BA ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AA 3 4 ? anti-parallel BA 1 2 ? anti-parallel BA 2 3 ? anti-parallel BA 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 TYR A 42 ? PRO A 48 ? TYR A 42 PRO A 48 AA 2 PHE A 55 ? PRO A 61 ? PHE A 55 PRO A 61 AA 3 LEU A 72 ? ASP A 75 ? LEU A 72 ASP A 75 AA 4 ARG A 80 ? VAL A 81 ? ARG A 80 VAL A 81 BA 1 TYR B 42 ? PRO B 48 ? TYR B 42 PRO B 48 BA 2 PHE B 55 ? PRO B 61 ? PHE B 55 PRO B 61 BA 3 LEU B 72 ? ASP B 75 ? LEU B 72 ASP B 75 BA 4 ARG B 80 ? VAL B 81 ? ARG B 80 VAL B 81 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N THR A 47 ? N THR A 47 O SER A 56 ? O SER A 56 AA 2 3 N ALA A 59 ? N ALA A 59 O LEU A 72 ? O LEU A 72 AA 3 4 N SER A 73 ? N SER A 73 O VAL A 81 ? O VAL A 81 BA 1 2 N THR B 47 ? N THR B 47 O SER B 56 ? O SER B 56 BA 2 3 N ALA B 59 ? N ALA B 59 O LEU B 72 ? O LEU B 72 BA 3 4 N SER B 73 ? N SER B 73 O VAL B 81 ? O VAL B 81 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE SO4 B 1090' AC2 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE NA B 1091' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 ARG A 5 ? ARG A 5 . ? 2_565 ? 2 AC1 5 GLY B 1 ? GLY B 1 . ? 1_555 ? 3 AC1 5 LYS B 2 ? LYS B 2 . ? 1_555 ? 4 AC1 5 GLN B 3 ? GLN B 3 . ? 1_555 ? 5 AC1 5 GLY B 4 ? GLY B 4 . ? 1_555 ? 6 AC2 6 LEU B 36 ? LEU B 36 . ? 1_555 ? 7 AC2 6 ASN B 38 ? ASN B 38 . ? 1_555 ? 8 AC2 6 PHE B 44 ? PHE B 44 . ? 1_555 ? 9 AC2 6 HOH F . ? HOH B 2021 . ? 1_555 ? 10 AC2 6 HOH F . ? HOH B 2022 . ? 1_555 ? 11 AC2 6 HOH F . ? HOH B 2024 . ? 1_555 ? # _database_PDB_matrix.entry_id 4US7 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4US7 _atom_sites.fract_transf_matrix[1][1] 0.020479 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010357 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009111 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NA O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 LYS 2 2 2 LYS LYS A . n A 1 3 GLN 3 3 3 GLN GLN A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 ARG 5 5 5 ARG ARG A . n A 1 6 ARG 6 6 6 ARG ARG A . n A 1 7 PHE 7 7 7 PHE PHE A . n A 1 8 ASP 8 8 8 ASP ASP A . n A 1 9 ALA 9 9 9 ALA ALA A . n A 1 10 GLN 10 10 10 GLN GLN A . n A 1 11 GLN 11 11 11 GLN GLN A . n A 1 12 TYR 12 12 12 TYR TYR A . n A 1 13 LEU 13 13 13 LEU LEU A . n A 1 14 VAL 14 14 14 VAL VAL A . n A 1 15 THR 15 15 15 THR THR A . n A 1 16 SER 16 16 16 SER SER A . n A 1 17 ALA 17 17 17 ALA ALA A . n A 1 18 GLN 18 18 18 GLN GLN A . n A 1 19 ALA 19 19 19 ALA ALA A . n A 1 20 LEU 20 20 20 LEU LEU A . n A 1 21 GLU 21 21 21 GLU GLU A . n A 1 22 ARG 22 22 22 ARG ARG A . n A 1 23 HIS 23 23 23 HIS HIS A . n A 1 24 TYR 24 24 24 TYR TYR A . n A 1 25 SER 25 25 25 SER SER A . n A 1 26 ARG 26 26 26 ARG ARG A . n A 1 27 ASN 27 27 27 ASN ASN A . n A 1 28 GLY 28 28 28 GLY GLY A . n A 1 29 LEU 29 29 29 LEU LEU A . n A 1 30 TYR 30 30 30 TYR TYR A . n A 1 31 PRO 31 31 31 PRO PRO A . n A 1 32 ALA 32 32 32 ALA ALA A . n A 1 33 SER 33 33 33 SER SER A . n A 1 34 GLN 34 34 34 GLN GLN A . n A 1 35 SER 35 35 35 SER SER A . n A 1 36 LEU 36 36 36 LEU LEU A . n A 1 37 ALA 37 37 37 ALA ALA A . n A 1 38 ASN 38 38 38 ASN ASN A . n A 1 39 SER 39 39 39 SER SER A . n A 1 40 PRO 40 40 40 PRO PRO A . n A 1 41 TYR 41 41 41 TYR TYR A . n A 1 42 TYR 42 42 42 TYR TYR A . n A 1 43 SER 43 43 43 SER SER A . n A 1 44 PHE 44 44 44 PHE PHE A . n A 1 45 SER 45 45 45 SER SER A . n A 1 46 TYR 46 46 46 TYR TYR A . n A 1 47 THR 47 47 47 THR THR A . n A 1 48 PRO 48 48 48 PRO PRO A . n A 1 49 THR 49 49 49 THR THR A . n A 1 50 ALA 50 50 50 ALA ALA A . n A 1 51 ASP 51 51 51 ASP ASP A . n A 1 52 LYS 52 52 52 LYS LYS A . n A 1 53 PHE 53 53 53 PHE PHE A . n A 1 54 GLY 54 54 54 GLY GLY A . n A 1 55 PHE 55 55 55 PHE PHE A . n A 1 56 SER 56 56 56 SER SER A . n A 1 57 LEU 57 57 57 LEU LEU A . n A 1 58 LYS 58 58 58 LYS LYS A . n A 1 59 ALA 59 59 59 ALA ALA A . n A 1 60 VAL 60 60 60 VAL VAL A . n A 1 61 PRO 61 61 61 PRO PRO A . n A 1 62 THR 62 62 62 THR THR A . n A 1 63 ASN 63 63 63 ASN ASN A . n A 1 64 ARG 64 64 64 ARG ARG A . n A 1 65 GLN 65 65 65 GLN GLN A . n A 1 66 SER 66 66 66 SER SER A . n A 1 67 ASP 67 67 67 ASP ASP A . n A 1 68 PRO 68 68 68 PRO PRO A . n A 1 69 CYS 69 69 69 CYS CYS A . n A 1 70 GLY 70 70 70 GLY GLY A . n A 1 71 THR 71 71 71 THR THR A . n A 1 72 LEU 72 72 72 LEU LEU A . n A 1 73 SER 73 73 73 SER SER A . n A 1 74 LEU 74 74 74 LEU LEU A . n A 1 75 ASP 75 75 75 ASP ASP A . n A 1 76 HIS 76 76 76 HIS HIS A . n A 1 77 LYS 77 77 77 LYS LYS A . n A 1 78 GLY 78 78 78 GLY GLY A . n A 1 79 VAL 79 79 79 VAL VAL A . n A 1 80 ARG 80 80 80 ARG ARG A . n A 1 81 VAL 81 81 81 VAL VAL A . n A 1 82 PRO 82 82 82 PRO PRO A . n A 1 83 ALA 83 83 83 ALA ALA A . n A 1 84 THR 84 84 84 THR THR A . n A 1 85 ASN 85 85 85 ASN ASN A . n A 1 86 CYS 86 86 86 CYS CYS A . n A 1 87 TRP 87 87 87 TRP TRP A . n A 1 88 SER 88 88 88 SER SER A . n A 1 89 HIS 89 89 89 HIS HIS A . n B 1 1 GLY 1 1 1 GLY GLY B . n B 1 2 LYS 2 2 2 LYS LYS B . n B 1 3 GLN 3 3 3 GLN GLN B . n B 1 4 GLY 4 4 4 GLY GLY B . n B 1 5 ARG 5 5 5 ARG ARG B . n B 1 6 ARG 6 6 6 ARG ARG B . n B 1 7 PHE 7 7 7 PHE PHE B . n B 1 8 ASP 8 8 8 ASP ASP B . n B 1 9 ALA 9 9 9 ALA ALA B . n B 1 10 GLN 10 10 10 GLN GLN B . n B 1 11 GLN 11 11 11 GLN GLN B . n B 1 12 TYR 12 12 12 TYR TYR B . n B 1 13 LEU 13 13 13 LEU LEU B . n B 1 14 VAL 14 14 14 VAL VAL B . n B 1 15 THR 15 15 15 THR THR B . n B 1 16 SER 16 16 16 SER SER B . n B 1 17 ALA 17 17 17 ALA ALA B . n B 1 18 GLN 18 18 18 GLN GLN B . n B 1 19 ALA 19 19 19 ALA ALA B . n B 1 20 LEU 20 20 20 LEU LEU B . n B 1 21 GLU 21 21 21 GLU GLU B . n B 1 22 ARG 22 22 22 ARG ARG B . n B 1 23 HIS 23 23 23 HIS HIS B . n B 1 24 TYR 24 24 24 TYR TYR B . n B 1 25 SER 25 25 25 SER SER B . n B 1 26 ARG 26 26 26 ARG ARG B . n B 1 27 ASN 27 27 27 ASN ASN B . n B 1 28 GLY 28 28 28 GLY GLY B . n B 1 29 LEU 29 29 29 LEU LEU B . n B 1 30 TYR 30 30 30 TYR TYR B . n B 1 31 PRO 31 31 31 PRO PRO B . n B 1 32 ALA 32 32 32 ALA ALA B . n B 1 33 SER 33 33 33 SER SER B . n B 1 34 GLN 34 34 34 GLN GLN B . n B 1 35 SER 35 35 35 SER SER B . n B 1 36 LEU 36 36 36 LEU LEU B . n B 1 37 ALA 37 37 37 ALA ALA B . n B 1 38 ASN 38 38 38 ASN ASN B . n B 1 39 SER 39 39 39 SER SER B . n B 1 40 PRO 40 40 40 PRO PRO B . n B 1 41 TYR 41 41 41 TYR TYR B . n B 1 42 TYR 42 42 42 TYR TYR B . n B 1 43 SER 43 43 43 SER SER B . n B 1 44 PHE 44 44 44 PHE PHE B . n B 1 45 SER 45 45 45 SER SER B . n B 1 46 TYR 46 46 46 TYR TYR B . n B 1 47 THR 47 47 47 THR THR B . n B 1 48 PRO 48 48 48 PRO PRO B . n B 1 49 THR 49 49 49 THR THR B . n B 1 50 ALA 50 50 50 ALA ALA B . n B 1 51 ASP 51 51 51 ASP ASP B . n B 1 52 LYS 52 52 52 LYS LYS B . n B 1 53 PHE 53 53 53 PHE PHE B . n B 1 54 GLY 54 54 54 GLY GLY B . n B 1 55 PHE 55 55 55 PHE PHE B . n B 1 56 SER 56 56 56 SER SER B . n B 1 57 LEU 57 57 57 LEU LEU B . n B 1 58 LYS 58 58 58 LYS LYS B . n B 1 59 ALA 59 59 59 ALA ALA B . n B 1 60 VAL 60 60 60 VAL VAL B . n B 1 61 PRO 61 61 61 PRO PRO B . n B 1 62 THR 62 62 62 THR THR B . n B 1 63 ASN 63 63 63 ASN ASN B . n B 1 64 ARG 64 64 64 ARG ARG B . n B 1 65 GLN 65 65 65 GLN GLN B . n B 1 66 SER 66 66 66 SER SER B . n B 1 67 ASP 67 67 67 ASP ASP B . n B 1 68 PRO 68 68 68 PRO PRO B . n B 1 69 CYS 69 69 69 CYS CYS B . n B 1 70 GLY 70 70 70 GLY GLY B . n B 1 71 THR 71 71 71 THR THR B . n B 1 72 LEU 72 72 72 LEU LEU B . n B 1 73 SER 73 73 73 SER SER B . n B 1 74 LEU 74 74 74 LEU LEU B . n B 1 75 ASP 75 75 75 ASP ASP B . n B 1 76 HIS 76 76 76 HIS HIS B . n B 1 77 LYS 77 77 77 LYS LYS B . n B 1 78 GLY 78 78 78 GLY GLY B . n B 1 79 VAL 79 79 79 VAL VAL B . n B 1 80 ARG 80 80 80 ARG ARG B . n B 1 81 VAL 81 81 81 VAL VAL B . n B 1 82 PRO 82 82 82 PRO PRO B . n B 1 83 ALA 83 83 83 ALA ALA B . n B 1 84 THR 84 84 84 THR THR B . n B 1 85 ASN 85 85 85 ASN ASN B . n B 1 86 CYS 86 86 86 CYS CYS B . n B 1 87 TRP 87 87 87 TRP TRP B . n B 1 88 SER 88 88 88 SER SER B . n B 1 89 HIS 89 89 89 HIS HIS B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 1 1090 1090 SO4 SO4 B . D 3 NA 1 1091 1091 NA NA B . E 4 HOH 1 2001 2001 HOH HOH A . E 4 HOH 2 2002 2002 HOH HOH A . E 4 HOH 3 2003 2003 HOH HOH A . E 4 HOH 4 2004 2004 HOH HOH A . E 4 HOH 5 2005 2005 HOH HOH A . E 4 HOH 6 2006 2006 HOH HOH A . E 4 HOH 7 2007 2007 HOH HOH A . E 4 HOH 8 2008 2008 HOH HOH A . E 4 HOH 9 2009 2009 HOH HOH A . E 4 HOH 10 2010 2010 HOH HOH A . E 4 HOH 11 2011 2011 HOH HOH A . E 4 HOH 12 2012 2012 HOH HOH A . E 4 HOH 13 2013 2013 HOH HOH A . E 4 HOH 14 2014 2014 HOH HOH A . E 4 HOH 15 2015 2015 HOH HOH A . E 4 HOH 16 2016 2016 HOH HOH A . E 4 HOH 17 2017 2017 HOH HOH A . E 4 HOH 18 2018 2018 HOH HOH A . E 4 HOH 19 2019 2019 HOH HOH A . E 4 HOH 20 2020 2020 HOH HOH A . E 4 HOH 21 2021 2021 HOH HOH A . E 4 HOH 22 2022 2022 HOH HOH A . E 4 HOH 23 2023 2023 HOH HOH A . E 4 HOH 24 2024 2024 HOH HOH A . E 4 HOH 25 2025 2025 HOH HOH A . E 4 HOH 26 2026 2026 HOH HOH A . E 4 HOH 27 2027 2027 HOH HOH A . E 4 HOH 28 2028 2028 HOH HOH A . E 4 HOH 29 2029 2029 HOH HOH A . E 4 HOH 30 2030 2030 HOH HOH A . E 4 HOH 31 2031 2031 HOH HOH A . E 4 HOH 32 2032 2032 HOH HOH A . E 4 HOH 33 2033 2033 HOH HOH A . E 4 HOH 34 2034 2034 HOH HOH A . E 4 HOH 35 2035 2035 HOH HOH A . E 4 HOH 36 2036 2036 HOH HOH A . E 4 HOH 37 2037 2037 HOH HOH A . E 4 HOH 38 2038 2038 HOH HOH A . E 4 HOH 39 2039 2039 HOH HOH A . E 4 HOH 40 2040 2040 HOH HOH A . E 4 HOH 41 2041 2041 HOH HOH A . E 4 HOH 42 2042 2042 HOH HOH A . E 4 HOH 43 2043 2043 HOH HOH A . E 4 HOH 44 2044 2044 HOH HOH A . E 4 HOH 45 2045 2045 HOH HOH A . E 4 HOH 46 2046 2046 HOH HOH A . E 4 HOH 47 2047 2047 HOH HOH A . E 4 HOH 48 2048 2048 HOH HOH A . E 4 HOH 49 2049 2049 HOH HOH A . E 4 HOH 50 2050 2050 HOH HOH A . E 4 HOH 51 2051 2051 HOH HOH A . E 4 HOH 52 2052 2052 HOH HOH A . E 4 HOH 53 2053 2053 HOH HOH A . E 4 HOH 54 2054 2054 HOH HOH A . E 4 HOH 55 2055 2055 HOH HOH A . E 4 HOH 56 2056 2056 HOH HOH A . E 4 HOH 57 2057 2057 HOH HOH A . E 4 HOH 58 2058 2058 HOH HOH A . E 4 HOH 59 2059 2059 HOH HOH A . E 4 HOH 60 2060 2060 HOH HOH A . E 4 HOH 61 2061 2061 HOH HOH A . E 4 HOH 62 2062 2062 HOH HOH A . E 4 HOH 63 2063 2063 HOH HOH A . E 4 HOH 64 2064 2064 HOH HOH A . E 4 HOH 65 2065 2065 HOH HOH A . E 4 HOH 66 2066 2066 HOH HOH A . E 4 HOH 67 2067 2067 HOH HOH A . E 4 HOH 68 2068 2068 HOH HOH A . E 4 HOH 69 2069 2069 HOH HOH A . E 4 HOH 70 2070 2070 HOH HOH A . F 4 HOH 1 2001 2001 HOH HOH B . F 4 HOH 2 2002 2002 HOH HOH B . F 4 HOH 3 2003 2003 HOH HOH B . F 4 HOH 4 2004 2004 HOH HOH B . F 4 HOH 5 2005 2005 HOH HOH B . F 4 HOH 6 2006 2006 HOH HOH B . F 4 HOH 7 2007 2007 HOH HOH B . F 4 HOH 8 2008 2008 HOH HOH B . F 4 HOH 9 2009 2009 HOH HOH B . F 4 HOH 10 2010 2010 HOH HOH B . F 4 HOH 11 2011 2011 HOH HOH B . F 4 HOH 12 2012 2012 HOH HOH B . F 4 HOH 13 2013 2013 HOH HOH B . F 4 HOH 14 2014 2014 HOH HOH B . F 4 HOH 15 2015 2015 HOH HOH B . F 4 HOH 16 2016 2016 HOH HOH B . F 4 HOH 17 2017 2017 HOH HOH B . F 4 HOH 18 2018 2018 HOH HOH B . F 4 HOH 19 2019 2019 HOH HOH B . F 4 HOH 20 2020 2020 HOH HOH B . F 4 HOH 21 2021 2021 HOH HOH B . F 4 HOH 22 2022 2022 HOH HOH B . F 4 HOH 23 2023 2023 HOH HOH B . F 4 HOH 24 2024 2024 HOH HOH B . F 4 HOH 25 2025 2025 HOH HOH B . F 4 HOH 26 2026 2026 HOH HOH B . F 4 HOH 27 2027 2027 HOH HOH B . F 4 HOH 28 2028 2028 HOH HOH B . F 4 HOH 29 2029 2029 HOH HOH B . F 4 HOH 30 2030 2030 HOH HOH B . F 4 HOH 31 2031 2031 HOH HOH B . F 4 HOH 32 2032 2032 HOH HOH B . F 4 HOH 33 2033 2033 HOH HOH B . F 4 HOH 34 2034 2034 HOH HOH B . F 4 HOH 35 2035 2035 HOH HOH B . F 4 HOH 36 2036 2036 HOH HOH B . F 4 HOH 37 2037 2037 HOH HOH B . F 4 HOH 38 2038 2038 HOH HOH B . F 4 HOH 39 2039 2039 HOH HOH B . F 4 HOH 40 2040 2040 HOH HOH B . F 4 HOH 41 2041 2041 HOH HOH B . F 4 HOH 42 2042 2042 HOH HOH B . F 4 HOH 43 2043 2043 HOH HOH B . F 4 HOH 44 2044 2044 HOH HOH B . F 4 HOH 45 2045 2045 HOH HOH B . F 4 HOH 46 2046 2046 HOH HOH B . F 4 HOH 47 2047 2047 HOH HOH B . F 4 HOH 48 2048 2048 HOH HOH B . F 4 HOH 49 2049 2049 HOH HOH B . F 4 HOH 50 2050 2050 HOH HOH B . F 4 HOH 51 2051 2051 HOH HOH B . F 4 HOH 52 2052 2052 HOH HOH B . F 4 HOH 53 2053 2053 HOH HOH B . F 4 HOH 54 2054 2054 HOH HOH B . F 4 HOH 55 2055 2055 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,E 2 1 B,C,D,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? B LEU 36 ? B LEU 36 ? 1_555 NA ? D NA . ? B NA 1091 ? 1_555 O ? B PHE 44 ? B PHE 44 ? 1_555 116.1 ? 2 O ? B LEU 36 ? B LEU 36 ? 1_555 NA ? D NA . ? B NA 1091 ? 1_555 OD1 ? B ASN 38 ? B ASN 38 ? 1_555 91.4 ? 3 O ? B PHE 44 ? B PHE 44 ? 1_555 NA ? D NA . ? B NA 1091 ? 1_555 OD1 ? B ASN 38 ? B ASN 38 ? 1_555 90.9 ? 4 O ? B LEU 36 ? B LEU 36 ? 1_555 NA ? D NA . ? B NA 1091 ? 1_555 O ? F HOH . ? B HOH 2024 ? 1_555 163.3 ? 5 O ? B PHE 44 ? B PHE 44 ? 1_555 NA ? D NA . ? B NA 1091 ? 1_555 O ? F HOH . ? B HOH 2024 ? 1_555 79.0 ? 6 OD1 ? B ASN 38 ? B ASN 38 ? 1_555 NA ? D NA . ? B NA 1091 ? 1_555 O ? F HOH . ? B HOH 2024 ? 1_555 81.0 ? 7 O ? B LEU 36 ? B LEU 36 ? 1_555 NA ? D NA . ? B NA 1091 ? 1_555 O ? F HOH . ? B HOH 2021 ? 1_555 90.6 ? 8 O ? B PHE 44 ? B PHE 44 ? 1_555 NA ? D NA . ? B NA 1091 ? 1_555 O ? F HOH . ? B HOH 2021 ? 1_555 84.1 ? 9 OD1 ? B ASN 38 ? B ASN 38 ? 1_555 NA ? D NA . ? B NA 1091 ? 1_555 O ? F HOH . ? B HOH 2021 ? 1_555 175.0 ? 10 O ? F HOH . ? B HOH 2024 ? 1_555 NA ? D NA . ? B NA 1091 ? 1_555 O ? F HOH . ? B HOH 2021 ? 1_555 98.2 ? 11 O ? B LEU 36 ? B LEU 36 ? 1_555 NA ? D NA . ? B NA 1091 ? 1_555 O ? F HOH . ? B HOH 2022 ? 1_555 70.2 ? 12 O ? B PHE 44 ? B PHE 44 ? 1_555 NA ? D NA . ? B NA 1091 ? 1_555 O ? F HOH . ? B HOH 2022 ? 1_555 173.6 ? 13 OD1 ? B ASN 38 ? B ASN 38 ? 1_555 NA ? D NA . ? B NA 1091 ? 1_555 O ? F HOH . ? B HOH 2022 ? 1_555 89.8 ? 14 O ? F HOH . ? B HOH 2024 ? 1_555 NA ? D NA . ? B NA 1091 ? 1_555 O ? F HOH . ? B HOH 2022 ? 1_555 94.8 ? 15 O ? F HOH . ? B HOH 2021 ? 1_555 NA ? D NA . ? B NA 1091 ? 1_555 O ? F HOH . ? B HOH 2022 ? 1_555 95.2 ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2015-04-29 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 10.4949 42.0112 35.8884 0.1494 0.2542 0.1965 -0.0108 -0.0207 0.0113 5.3556 7.4398 9.1793 -2.1442 -4.0427 4.7399 0.1823 0.0103 0.0069 0.1259 -0.1255 0.1132 -0.1598 -0.6446 0.0793 'X-RAY DIFFRACTION' 2 ? refined 18.4284 45.9079 33.0302 0.1423 0.1658 0.2591 0.0201 -0.0173 -0.0287 1.6308 4.6866 4.2939 -0.2498 -1.1971 1.3972 0.0317 0.1612 0.0404 -0.1089 0.0844 -0.3743 -0.1966 -0.1510 -0.1192 'X-RAY DIFFRACTION' 3 ? refined 14.8152 51.1964 45.8593 0.4193 0.2207 0.3466 0.0569 -0.0679 -0.0585 4.2822 2.3834 7.3489 -0.6044 -0.8677 0.8182 -0.0504 -0.1945 0.5884 0.9358 0.2100 -0.2355 -0.2280 -0.3204 -0.1570 'X-RAY DIFFRACTION' 4 ? refined 15.4520 39.0722 45.5571 0.4483 0.2303 0.2903 0.0260 -0.0735 -0.0156 6.3985 5.2893 3.3573 -0.5544 -4.0692 2.2387 -0.4887 -0.3231 0.3411 1.2360 0.3145 -0.2538 0.9750 -0.0917 0.2006 'X-RAY DIFFRACTION' 5 ? refined 1.8430 31.9153 30.1028 0.1525 0.1694 0.2265 0.0297 -0.0453 -0.0078 6.5285 5.9815 8.9415 -1.1259 -2.6172 2.6048 0.2105 0.4814 0.0812 -0.3390 -0.0820 0.0196 -0.3326 -0.1592 -0.1219 'X-RAY DIFFRACTION' 6 ? refined 7.8512 24.7311 29.5191 0.1651 0.2403 0.2823 0.0106 -0.0538 -0.1019 3.0278 3.2271 7.0109 -0.3675 -0.5963 0.3180 0.1428 0.4120 -0.5485 -0.1344 0.0523 -0.1139 0.4439 0.1226 -0.2318 'X-RAY DIFFRACTION' 7 ? refined -2.1614 25.3721 38.3835 0.2266 0.1998 0.2805 -0.0368 0.0127 0.0054 5.9405 4.8084 7.6524 -0.4962 1.4527 0.7542 0.0444 -0.5181 -0.2660 0.5254 -0.1605 0.2219 -0.0396 -0.3405 0.0622 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? ;CHAIN 'A' AND (RESID 1 THROUGH 27 ) ; 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? ;CHAIN 'A' AND (RESID 28 THROUGH 61 ) ; 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? ;CHAIN 'A' AND (RESID 62 THROUGH 75 ) ; 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? ;CHAIN 'A' AND (RESID 76 THROUGH 89 ) ; 'X-RAY DIFFRACTION' 5 5 ? ? ? ? ? ? ? ? ? ;CHAIN 'B' AND (RESID 1 THROUGH 27 ) ; 'X-RAY DIFFRACTION' 6 6 ? ? ? ? ? ? ? ? ? ;CHAIN 'B' AND (RESID 28 THROUGH 61 ) ; 'X-RAY DIFFRACTION' 7 7 ? ? ? ? ? ? ? ? ? ;CHAIN 'B' AND (RESID 62 THROUGH 89 ) ; # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal PHENIX refinement '(PHENIX.REFINE)' ? 1 XDS 'data reduction' . ? 2 XSCALE 'data scaling' . ? 3 PHENIX phasing . ? 4 # _pdbx_entry_details.entry_id 4US7 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details 'N-TERMINAL G REMAINDER OF TEV CLEAVAGE SITE' # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASN _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 85 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 70.80 _pdbx_validate_torsion.psi -8.70 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 'SODIUM ION' NA 4 water HOH #