data_4XDM # _entry.id 4XDM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4XDM pdb_00004xdm 10.2210/pdb4xdm/pdb WWPDB D_1000205486 ? ? # loop_ _pdbx_database_related.content_type _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.details unspecified 4XC0 PDB . unspecified 4XCJ PDB . unspecified 4XCL PDB . unspecified 4XD8 PDB . # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 4XDM _pdbx_database_status.recvd_initial_deposition_date 2014-12-19 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Raman, S.' 1 'Suguna, K.' 2 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Sci Rep' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2045-2322 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 5 _citation.language ? _citation.page_first 17015 _citation.page_last 17015 _citation.title 'First Structural View of a Peptide Interacting with the Nucleotide Binding Domain of Heat Shock Protein 90' _citation.year 2015 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/srep17015 _citation.pdbx_database_id_PubMed 26599366 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Raman, S.' 1 ? primary 'Singh, M.' 2 ? primary 'Tatu, U.' 3 ? primary 'Suguna, K.' 4 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 107.93 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 4XDM _cell.details ? _cell.formula_units_Z ? _cell.length_a 41.400 _cell.length_a_esd ? _cell.length_b 44.630 _cell.length_b_esd ? _cell.length_c 60.160 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 2 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 4XDM _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Heat shock cognate 90 kDa protein' 29226.871 1 ? ? 'N-terminal domain, UNP residues 1-223' ? 2 non-polymer syn GELDANAMYCIN 560.636 1 ? ? ? ? 3 non-polymer syn 'DI(HYDROXYETHYL)ETHER' 106.120 1 ? ? ? ? 4 water nat water 18.015 141 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Heat shock protein 90' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MRGSHHHHHHGMASMTGGQQMGRDLYDDDDKDRWGSMAESQVERFTFQAEINQLMSLIINTFYSNKEVFLRELISNASDA LDKIRYQSLTDASVLESKTELEIKIIPDKTAKTLTLIDSGIGMTKTDMVKNLGTIARSGTKNFMEQLQSGAADISMIGQF GVGFYSAYLVADTVIVHSKNNDDEQYVWESSAGGEFTIALDHTEPLGRGTKIVLHMKEDQLDYLDETKIKNLVKKHSEFI QYPISLLTIKEKEVDEETT ; _entity_poly.pdbx_seq_one_letter_code_can ;MRGSHHHHHHGMASMTGGQQMGRDLYDDDDKDRWGSMAESQVERFTFQAEINQLMSLIINTFYSNKEVFLRELISNASDA LDKIRYQSLTDASVLESKTELEIKIIPDKTAKTLTLIDSGIGMTKTDMVKNLGTIARSGTKNFMEQLQSGAADISMIGQF GVGFYSAYLVADTVIVHSKNNDDEQYVWESSAGGEFTIALDHTEPLGRGTKIVLHMKEDQLDYLDETKIKNLVKKHSEFI QYPISLLTIKEKEVDEETT ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ARG n 1 3 GLY n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 GLY n 1 12 MET n 1 13 ALA n 1 14 SER n 1 15 MET n 1 16 THR n 1 17 GLY n 1 18 GLY n 1 19 GLN n 1 20 GLN n 1 21 MET n 1 22 GLY n 1 23 ARG n 1 24 ASP n 1 25 LEU n 1 26 TYR n 1 27 ASP n 1 28 ASP n 1 29 ASP n 1 30 ASP n 1 31 LYS n 1 32 ASP n 1 33 ARG n 1 34 TRP n 1 35 GLY n 1 36 SER n 1 37 MET n 1 38 ALA n 1 39 GLU n 1 40 SER n 1 41 GLN n 1 42 VAL n 1 43 GLU n 1 44 ARG n 1 45 PHE n 1 46 THR n 1 47 PHE n 1 48 GLN n 1 49 ALA n 1 50 GLU n 1 51 ILE n 1 52 ASN n 1 53 GLN n 1 54 LEU n 1 55 MET n 1 56 SER n 1 57 LEU n 1 58 ILE n 1 59 ILE n 1 60 ASN n 1 61 THR n 1 62 PHE n 1 63 TYR n 1 64 SER n 1 65 ASN n 1 66 LYS n 1 67 GLU n 1 68 VAL n 1 69 PHE n 1 70 LEU n 1 71 ARG n 1 72 GLU n 1 73 LEU n 1 74 ILE n 1 75 SER n 1 76 ASN n 1 77 ALA n 1 78 SER n 1 79 ASP n 1 80 ALA n 1 81 LEU n 1 82 ASP n 1 83 LYS n 1 84 ILE n 1 85 ARG n 1 86 TYR n 1 87 GLN n 1 88 SER n 1 89 LEU n 1 90 THR n 1 91 ASP n 1 92 ALA n 1 93 SER n 1 94 VAL n 1 95 LEU n 1 96 GLU n 1 97 SER n 1 98 LYS n 1 99 THR n 1 100 GLU n 1 101 LEU n 1 102 GLU n 1 103 ILE n 1 104 LYS n 1 105 ILE n 1 106 ILE n 1 107 PRO n 1 108 ASP n 1 109 LYS n 1 110 THR n 1 111 ALA n 1 112 LYS n 1 113 THR n 1 114 LEU n 1 115 THR n 1 116 LEU n 1 117 ILE n 1 118 ASP n 1 119 SER n 1 120 GLY n 1 121 ILE n 1 122 GLY n 1 123 MET n 1 124 THR n 1 125 LYS n 1 126 THR n 1 127 ASP n 1 128 MET n 1 129 VAL n 1 130 LYS n 1 131 ASN n 1 132 LEU n 1 133 GLY n 1 134 THR n 1 135 ILE n 1 136 ALA n 1 137 ARG n 1 138 SER n 1 139 GLY n 1 140 THR n 1 141 LYS n 1 142 ASN n 1 143 PHE n 1 144 MET n 1 145 GLU n 1 146 GLN n 1 147 LEU n 1 148 GLN n 1 149 SER n 1 150 GLY n 1 151 ALA n 1 152 ALA n 1 153 ASP n 1 154 ILE n 1 155 SER n 1 156 MET n 1 157 ILE n 1 158 GLY n 1 159 GLN n 1 160 PHE n 1 161 GLY n 1 162 VAL n 1 163 GLY n 1 164 PHE n 1 165 TYR n 1 166 SER n 1 167 ALA n 1 168 TYR n 1 169 LEU n 1 170 VAL n 1 171 ALA n 1 172 ASP n 1 173 THR n 1 174 VAL n 1 175 ILE n 1 176 VAL n 1 177 HIS n 1 178 SER n 1 179 LYS n 1 180 ASN n 1 181 ASN n 1 182 ASP n 1 183 ASP n 1 184 GLU n 1 185 GLN n 1 186 TYR n 1 187 VAL n 1 188 TRP n 1 189 GLU n 1 190 SER n 1 191 SER n 1 192 ALA n 1 193 GLY n 1 194 GLY n 1 195 GLU n 1 196 PHE n 1 197 THR n 1 198 ILE n 1 199 ALA n 1 200 LEU n 1 201 ASP n 1 202 HIS n 1 203 THR n 1 204 GLU n 1 205 PRO n 1 206 LEU n 1 207 GLY n 1 208 ARG n 1 209 GLY n 1 210 THR n 1 211 LYS n 1 212 ILE n 1 213 VAL n 1 214 LEU n 1 215 HIS n 1 216 MET n 1 217 LYS n 1 218 GLU n 1 219 ASP n 1 220 GLN n 1 221 LEU n 1 222 ASP n 1 223 TYR n 1 224 LEU n 1 225 ASP n 1 226 GLU n 1 227 THR n 1 228 LYS n 1 229 ILE n 1 230 LYS n 1 231 ASN n 1 232 LEU n 1 233 VAL n 1 234 LYS n 1 235 LYS n 1 236 HIS n 1 237 SER n 1 238 GLU n 1 239 PHE n 1 240 ILE n 1 241 GLN n 1 242 TYR n 1 243 PRO n 1 244 ILE n 1 245 SER n 1 246 LEU n 1 247 LEU n 1 248 THR n 1 249 ILE n 1 250 LYS n 1 251 GLU n 1 252 LYS n 1 253 GLU n 1 254 VAL n 1 255 ASP n 1 256 GLU n 1 257 GLU n 1 258 THR n 1 259 THR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 259 _entity_src_gen.gene_src_common_name 'Slime mold' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene hspD _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain AX2 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Dictyostelium discoideum' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 44689 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain Rosetta _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code HSC90_DICDI _struct_ref.pdbx_db_accession P54651 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MAESQVERFTFQAEINQLMSLIINTFYSNKEVFLRELISNASDALDKIRYQSLTDASVLESKTELEIKIIPDKTAKTLTL IDSGIGMTKTDMVKNLGTIARSGTKNFMEQLQSGAADISMIGQFGVGFYSAYLVADTVIVHSKNNDDEQYVWESSAGGEF TIALDHTEPLGRGTKIVLHMKEDQLDYLDETKIKNLVKKHSEFIQYPISLLTIKEKEVDEETT ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4XDM _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 37 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 259 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P54651 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 223 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 223 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4XDM MET A 1 ? UNP P54651 ? ? 'expression tag' -35 1 1 4XDM ARG A 2 ? UNP P54651 ? ? 'expression tag' -34 2 1 4XDM GLY A 3 ? UNP P54651 ? ? 'expression tag' -33 3 1 4XDM SER A 4 ? UNP P54651 ? ? 'expression tag' -32 4 1 4XDM HIS A 5 ? UNP P54651 ? ? 'expression tag' -31 5 1 4XDM HIS A 6 ? UNP P54651 ? ? 'expression tag' -30 6 1 4XDM HIS A 7 ? UNP P54651 ? ? 'expression tag' -29 7 1 4XDM HIS A 8 ? UNP P54651 ? ? 'expression tag' -28 8 1 4XDM HIS A 9 ? UNP P54651 ? ? 'expression tag' -27 9 1 4XDM HIS A 10 ? UNP P54651 ? ? 'expression tag' -26 10 1 4XDM GLY A 11 ? UNP P54651 ? ? 'expression tag' -25 11 1 4XDM MET A 12 ? UNP P54651 ? ? 'expression tag' -24 12 1 4XDM ALA A 13 ? UNP P54651 ? ? 'expression tag' -23 13 1 4XDM SER A 14 ? UNP P54651 ? ? 'expression tag' -22 14 1 4XDM MET A 15 ? UNP P54651 ? ? 'expression tag' -21 15 1 4XDM THR A 16 ? UNP P54651 ? ? 'expression tag' -20 16 1 4XDM GLY A 17 ? UNP P54651 ? ? 'expression tag' -19 17 1 4XDM GLY A 18 ? UNP P54651 ? ? 'expression tag' -18 18 1 4XDM GLN A 19 ? UNP P54651 ? ? 'expression tag' -17 19 1 4XDM GLN A 20 ? UNP P54651 ? ? 'expression tag' -16 20 1 4XDM MET A 21 ? UNP P54651 ? ? 'expression tag' -15 21 1 4XDM GLY A 22 ? UNP P54651 ? ? 'expression tag' -14 22 1 4XDM ARG A 23 ? UNP P54651 ? ? 'expression tag' -13 23 1 4XDM ASP A 24 ? UNP P54651 ? ? 'expression tag' -12 24 1 4XDM LEU A 25 ? UNP P54651 ? ? 'expression tag' -11 25 1 4XDM TYR A 26 ? UNP P54651 ? ? 'expression tag' -10 26 1 4XDM ASP A 27 ? UNP P54651 ? ? 'expression tag' -9 27 1 4XDM ASP A 28 ? UNP P54651 ? ? 'expression tag' -8 28 1 4XDM ASP A 29 ? UNP P54651 ? ? 'expression tag' -7 29 1 4XDM ASP A 30 ? UNP P54651 ? ? 'expression tag' -6 30 1 4XDM LYS A 31 ? UNP P54651 ? ? 'expression tag' -5 31 1 4XDM ASP A 32 ? UNP P54651 ? ? 'expression tag' -4 32 1 4XDM ARG A 33 ? UNP P54651 ? ? 'expression tag' -3 33 1 4XDM TRP A 34 ? UNP P54651 ? ? 'expression tag' -2 34 1 4XDM GLY A 35 ? UNP P54651 ? ? 'expression tag' -1 35 1 4XDM SER A 36 ? UNP P54651 ? ? 'expression tag' 0 36 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GDM non-polymer . GELDANAMYCIN ? 'C29 H40 N2 O9' 560.636 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PEG non-polymer . 'DI(HYDROXYETHYL)ETHER' ? 'C4 H10 O3' 106.120 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 4XDM _exptl.crystals_number ? _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.81 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 32.02 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 290 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1 M Hepes, PEG 3350' _exptl_crystal_grow.pdbx_pH_range '7.0 - 8.5' # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2012-11-25 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.95372 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ESRF BEAMLINE BM14' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.95372 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BM14 _diffrn_source.pdbx_synchrotron_site ESRF # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 4XDM _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.50 _reflns.d_resolution_low 57.24 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 33584 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.8 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 4.3 _reflns.pdbx_Rmerge_I_obs 0.048 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 12.5 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.50 _reflns_shell.d_res_low 1.58 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.2 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 100 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.682 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 4.3 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] -0.56 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] -0.46 _refine.aniso_B[2][2] 1.28 _refine.aniso_B[2][3] 0.00 _refine.aniso_B[3][3] -1.00 _refine.B_iso_max ? _refine.B_iso_mean 27.028 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.969 _refine.correlation_coeff_Fo_to_Fc_free 0.953 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 4XDM _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.50 _refine.ls_d_res_low 57.24 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 31865 _refine.ls_number_reflns_R_free 1703 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.81 _refine.ls_percent_reflns_R_free 5.1 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.18376 _refine.ls_R_factor_R_free 0.22426 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.18165 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details MASK _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 4XCJ _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.099 _refine.pdbx_overall_ESU_R_Free 0.084 _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 3.317 _refine.overall_SU_ML 0.056 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1677 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 44 _refine_hist.number_atoms_solvent 141 _refine_hist.number_atoms_total 1862 _refine_hist.d_res_high 1.50 _refine_hist.d_res_low 57.24 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.008 0.022 1783 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.215 1.991 2417 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 5.868 5.000 226 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 37.182 25.921 76 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 11.834 15.000 330 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 17.940 15.000 5 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.081 0.200 287 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.005 0.020 1303 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? 0.862 1.500 1083 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 1.500 2.000 1759 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 2.208 3.000 700 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? 3.434 4.500 652 ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_long_range_B_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_long_range_B_other ? ? 'X-RAY DIFFRACTION' ? 1.011 3.000 1783 ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.500 _refine_ls_shell.d_res_low 1.539 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 123 _refine_ls_shell.number_reflns_R_work 2356 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.301 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.277 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 4XDM _struct.title 'N-terminal domain of Hsp90 from Dictyostelium discoideum in complex with Geldanamycin' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 4XDM _struct_keywords.text 'Hsp90, Geldanamycin, chaperone' _struct_keywords.pdbx_keywords CHAPERONE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLN A 48 ? THR A 61 ? GLN A 12 THR A 25 1 ? 14 HELX_P HELX_P2 AA2 GLU A 67 ? ASP A 91 ? GLU A 31 ASP A 55 1 ? 25 HELX_P HELX_P3 AA3 ALA A 92 ? LYS A 98 ? ALA A 56 LYS A 62 5 ? 7 HELX_P HELX_P4 AA4 THR A 124 ? LEU A 132 ? THR A 88 LEU A 96 1 ? 9 HELX_P HELX_P5 AA5 GLY A 139 ? GLY A 150 ? GLY A 103 GLY A 114 1 ? 12 HELX_P HELX_P6 AA6 ASP A 153 ? GLY A 161 ? ASP A 117 GLY A 125 5 ? 9 HELX_P HELX_P7 AA7 VAL A 162 ? LEU A 169 ? VAL A 126 LEU A 133 5 ? 8 HELX_P HELX_P8 AA8 GLU A 218 ? LEU A 224 ? GLU A 182 LEU A 188 5 ? 7 HELX_P HELX_P9 AA9 ASP A 225 ? HIS A 236 ? ASP A 189 HIS A 200 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 8 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA1 6 7 ? anti-parallel AA1 7 8 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 42 ? THR A 46 ? VAL A 6 THR A 10 AA1 2 GLU A 195 ? LEU A 200 ? GLU A 159 LEU A 164 AA1 3 TYR A 186 ? SER A 190 ? TYR A 150 SER A 154 AA1 4 ALA A 171 ? LYS A 179 ? ALA A 135 LYS A 143 AA1 5 GLY A 209 ? MET A 216 ? GLY A 173 MET A 180 AA1 6 THR A 113 ? ASP A 118 ? THR A 77 ASP A 82 AA1 7 ILE A 103 ? ASP A 108 ? ILE A 67 ASP A 72 AA1 8 ILE A 244 ? LEU A 246 ? ILE A 208 LEU A 210 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N PHE A 45 ? N PHE A 9 O PHE A 196 ? O PHE A 160 AA1 2 3 O ALA A 199 ? O ALA A 163 N VAL A 187 ? N VAL A 151 AA1 3 4 O TRP A 188 ? O TRP A 152 N VAL A 176 ? N VAL A 140 AA1 4 5 N HIS A 177 ? N HIS A 141 O LYS A 211 ? O LYS A 175 AA1 5 6 O LEU A 214 ? O LEU A 178 N LEU A 114 ? N LEU A 78 AA1 6 7 O THR A 115 ? O THR A 79 N ILE A 106 ? N ILE A 70 AA1 7 8 N ILE A 105 ? N ILE A 69 O SER A 245 ? O SER A 209 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id GDM _struct_site.pdbx_auth_seq_id 301 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 19 _struct_site.details 'binding site for residue GDM A 301' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 19 ASN A 76 ? ASN A 40 . ? 1_555 ? 2 AC1 19 ALA A 77 ? ALA A 41 . ? 1_555 ? 3 AC1 19 ASP A 79 ? ASP A 43 . ? 1_555 ? 4 AC1 19 ALA A 80 ? ALA A 44 . ? 1_555 ? 5 AC1 19 LYS A 83 ? LYS A 47 . ? 1_555 ? 6 AC1 19 ASP A 118 ? ASP A 82 . ? 1_555 ? 7 AC1 19 ILE A 121 ? ILE A 85 . ? 1_555 ? 8 AC1 19 MET A 123 ? MET A 87 . ? 1_555 ? 9 AC1 19 ASN A 131 ? ASN A 95 . ? 1_555 ? 10 AC1 19 ARG A 137 ? ARG A 101 . ? 1_555 ? 11 AC1 19 GLY A 161 ? GLY A 125 . ? 1_555 ? 12 AC1 19 VAL A 162 ? VAL A 126 . ? 1_555 ? 13 AC1 19 GLY A 163 ? GLY A 127 . ? 1_555 ? 14 AC1 19 PHE A 164 ? PHE A 128 . ? 1_555 ? 15 AC1 19 THR A 210 ? THR A 174 . ? 1_555 ? 16 AC1 19 HOH D . ? HOH A 450 . ? 1_555 ? 17 AC1 19 HOH D . ? HOH A 456 . ? 1_555 ? 18 AC1 19 HOH D . ? HOH A 467 . ? 1_555 ? 19 AC1 19 HOH D . ? HOH A 503 . ? 1_555 ? # _atom_sites.entry_id 4XDM _atom_sites.fract_transf_matrix[1][1] 0.024155 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.007816 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022406 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017471 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -35 ? ? ? A . n A 1 2 ARG 2 -34 ? ? ? A . n A 1 3 GLY 3 -33 ? ? ? A . n A 1 4 SER 4 -32 ? ? ? A . n A 1 5 HIS 5 -31 ? ? ? A . n A 1 6 HIS 6 -30 ? ? ? A . n A 1 7 HIS 7 -29 ? ? ? A . n A 1 8 HIS 8 -28 ? ? ? A . n A 1 9 HIS 9 -27 ? ? ? A . n A 1 10 HIS 10 -26 ? ? ? A . n A 1 11 GLY 11 -25 ? ? ? A . n A 1 12 MET 12 -24 ? ? ? A . n A 1 13 ALA 13 -23 ? ? ? A . n A 1 14 SER 14 -22 ? ? ? A . n A 1 15 MET 15 -21 ? ? ? A . n A 1 16 THR 16 -20 ? ? ? A . n A 1 17 GLY 17 -19 ? ? ? A . n A 1 18 GLY 18 -18 ? ? ? A . n A 1 19 GLN 19 -17 ? ? ? A . n A 1 20 GLN 20 -16 ? ? ? A . n A 1 21 MET 21 -15 ? ? ? A . n A 1 22 GLY 22 -14 ? ? ? A . n A 1 23 ARG 23 -13 ? ? ? A . n A 1 24 ASP 24 -12 ? ? ? A . n A 1 25 LEU 25 -11 ? ? ? A . n A 1 26 TYR 26 -10 ? ? ? A . n A 1 27 ASP 27 -9 ? ? ? A . n A 1 28 ASP 28 -8 ? ? ? A . n A 1 29 ASP 29 -7 ? ? ? A . n A 1 30 ASP 30 -6 ? ? ? A . n A 1 31 LYS 31 -5 ? ? ? A . n A 1 32 ASP 32 -4 ? ? ? A . n A 1 33 ARG 33 -3 ? ? ? A . n A 1 34 TRP 34 -2 ? ? ? A . n A 1 35 GLY 35 -1 ? ? ? A . n A 1 36 SER 36 0 ? ? ? A . n A 1 37 MET 37 1 1 MET MET A . n A 1 38 ALA 38 2 2 ALA ALA A . n A 1 39 GLU 39 3 3 GLU GLU A . n A 1 40 SER 40 4 4 SER SER A . n A 1 41 GLN 41 5 5 GLN GLN A . n A 1 42 VAL 42 6 6 VAL VAL A . n A 1 43 GLU 43 7 7 GLU GLU A . n A 1 44 ARG 44 8 8 ARG ARG A . n A 1 45 PHE 45 9 9 PHE PHE A . n A 1 46 THR 46 10 10 THR THR A . n A 1 47 PHE 47 11 11 PHE PHE A . n A 1 48 GLN 48 12 12 GLN GLN A . n A 1 49 ALA 49 13 13 ALA ALA A . n A 1 50 GLU 50 14 14 GLU GLU A . n A 1 51 ILE 51 15 15 ILE ILE A . n A 1 52 ASN 52 16 16 ASN ASN A . n A 1 53 GLN 53 17 17 GLN GLN A . n A 1 54 LEU 54 18 18 LEU LEU A . n A 1 55 MET 55 19 19 MET MET A . n A 1 56 SER 56 20 20 SER SER A . n A 1 57 LEU 57 21 21 LEU LEU A . n A 1 58 ILE 58 22 22 ILE ILE A . n A 1 59 ILE 59 23 23 ILE ILE A . n A 1 60 ASN 60 24 24 ASN ASN A . n A 1 61 THR 61 25 25 THR THR A . n A 1 62 PHE 62 26 26 PHE PHE A . n A 1 63 TYR 63 27 27 TYR TYR A . n A 1 64 SER 64 28 28 SER SER A . n A 1 65 ASN 65 29 29 ASN ASN A . n A 1 66 LYS 66 30 30 LYS LYS A . n A 1 67 GLU 67 31 31 GLU GLU A . n A 1 68 VAL 68 32 32 VAL VAL A . n A 1 69 PHE 69 33 33 PHE PHE A . n A 1 70 LEU 70 34 34 LEU LEU A . n A 1 71 ARG 71 35 35 ARG ARG A . n A 1 72 GLU 72 36 36 GLU GLU A . n A 1 73 LEU 73 37 37 LEU LEU A . n A 1 74 ILE 74 38 38 ILE ILE A . n A 1 75 SER 75 39 39 SER SER A . n A 1 76 ASN 76 40 40 ASN ASN A . n A 1 77 ALA 77 41 41 ALA ALA A . n A 1 78 SER 78 42 42 SER SER A . n A 1 79 ASP 79 43 43 ASP ASP A . n A 1 80 ALA 80 44 44 ALA ALA A . n A 1 81 LEU 81 45 45 LEU LEU A . n A 1 82 ASP 82 46 46 ASP ASP A . n A 1 83 LYS 83 47 47 LYS LYS A . n A 1 84 ILE 84 48 48 ILE ILE A . n A 1 85 ARG 85 49 49 ARG ARG A . n A 1 86 TYR 86 50 50 TYR TYR A . n A 1 87 GLN 87 51 51 GLN GLN A . n A 1 88 SER 88 52 52 SER SER A . n A 1 89 LEU 89 53 53 LEU LEU A . n A 1 90 THR 90 54 54 THR THR A . n A 1 91 ASP 91 55 55 ASP ASP A . n A 1 92 ALA 92 56 56 ALA ALA A . n A 1 93 SER 93 57 57 SER SER A . n A 1 94 VAL 94 58 58 VAL VAL A . n A 1 95 LEU 95 59 59 LEU LEU A . n A 1 96 GLU 96 60 60 GLU GLU A . n A 1 97 SER 97 61 61 SER SER A . n A 1 98 LYS 98 62 62 LYS LYS A . n A 1 99 THR 99 63 63 THR THR A . n A 1 100 GLU 100 64 64 GLU GLU A . n A 1 101 LEU 101 65 65 LEU LEU A . n A 1 102 GLU 102 66 66 GLU GLU A . n A 1 103 ILE 103 67 67 ILE ILE A . n A 1 104 LYS 104 68 68 LYS LYS A . n A 1 105 ILE 105 69 69 ILE ILE A . n A 1 106 ILE 106 70 70 ILE ILE A . n A 1 107 PRO 107 71 71 PRO PRO A . n A 1 108 ASP 108 72 72 ASP ASP A . n A 1 109 LYS 109 73 73 LYS LYS A . n A 1 110 THR 110 74 74 THR THR A . n A 1 111 ALA 111 75 75 ALA ALA A . n A 1 112 LYS 112 76 76 LYS LYS A . n A 1 113 THR 113 77 77 THR THR A . n A 1 114 LEU 114 78 78 LEU LEU A . n A 1 115 THR 115 79 79 THR THR A . n A 1 116 LEU 116 80 80 LEU LEU A . n A 1 117 ILE 117 81 81 ILE ILE A . n A 1 118 ASP 118 82 82 ASP ASP A . n A 1 119 SER 119 83 83 SER SER A . n A 1 120 GLY 120 84 84 GLY GLY A . n A 1 121 ILE 121 85 85 ILE ILE A . n A 1 122 GLY 122 86 86 GLY GLY A . n A 1 123 MET 123 87 87 MET MET A . n A 1 124 THR 124 88 88 THR THR A . n A 1 125 LYS 125 89 89 LYS LYS A . n A 1 126 THR 126 90 90 THR THR A . n A 1 127 ASP 127 91 91 ASP ASP A . n A 1 128 MET 128 92 92 MET MET A . n A 1 129 VAL 129 93 93 VAL VAL A . n A 1 130 LYS 130 94 94 LYS LYS A . n A 1 131 ASN 131 95 95 ASN ASN A . n A 1 132 LEU 132 96 96 LEU LEU A . n A 1 133 GLY 133 97 97 GLY GLY A . n A 1 134 THR 134 98 98 THR THR A . n A 1 135 ILE 135 99 99 ILE ILE A . n A 1 136 ALA 136 100 100 ALA ALA A . n A 1 137 ARG 137 101 101 ARG ARG A . n A 1 138 SER 138 102 102 SER ALA A . n A 1 139 GLY 139 103 103 GLY GLY A . n A 1 140 THR 140 104 104 THR THR A . n A 1 141 LYS 141 105 105 LYS ALA A . n A 1 142 ASN 142 106 106 ASN ASN A . n A 1 143 PHE 143 107 107 PHE PHE A . n A 1 144 MET 144 108 108 MET MET A . n A 1 145 GLU 145 109 109 GLU GLU A . n A 1 146 GLN 146 110 110 GLN GLN A . n A 1 147 LEU 147 111 111 LEU LEU A . n A 1 148 GLN 148 112 112 GLN ALA A . n A 1 149 SER 149 113 113 SER SER A . n A 1 150 GLY 150 114 114 GLY GLY A . n A 1 151 ALA 151 115 115 ALA ALA A . n A 1 152 ALA 152 116 116 ALA ALA A . n A 1 153 ASP 153 117 117 ASP ASP A . n A 1 154 ILE 154 118 118 ILE ILE A . n A 1 155 SER 155 119 119 SER SER A . n A 1 156 MET 156 120 120 MET MET A . n A 1 157 ILE 157 121 121 ILE ILE A . n A 1 158 GLY 158 122 122 GLY GLY A . n A 1 159 GLN 159 123 123 GLN GLN A . n A 1 160 PHE 160 124 124 PHE PHE A . n A 1 161 GLY 161 125 125 GLY GLY A . n A 1 162 VAL 162 126 126 VAL VAL A . n A 1 163 GLY 163 127 127 GLY GLY A . n A 1 164 PHE 164 128 128 PHE PHE A . n A 1 165 TYR 165 129 129 TYR TYR A . n A 1 166 SER 166 130 130 SER SER A . n A 1 167 ALA 167 131 131 ALA ALA A . n A 1 168 TYR 168 132 132 TYR TYR A . n A 1 169 LEU 169 133 133 LEU LEU A . n A 1 170 VAL 170 134 134 VAL VAL A . n A 1 171 ALA 171 135 135 ALA ALA A . n A 1 172 ASP 172 136 136 ASP ASP A . n A 1 173 THR 173 137 137 THR THR A . n A 1 174 VAL 174 138 138 VAL VAL A . n A 1 175 ILE 175 139 139 ILE ILE A . n A 1 176 VAL 176 140 140 VAL VAL A . n A 1 177 HIS 177 141 141 HIS HIS A . n A 1 178 SER 178 142 142 SER SER A . n A 1 179 LYS 179 143 143 LYS LYS A . n A 1 180 ASN 180 144 144 ASN ASN A . n A 1 181 ASN 181 145 145 ASN ASN A . n A 1 182 ASP 182 146 146 ASP ASP A . n A 1 183 ASP 183 147 147 ASP ASP A . n A 1 184 GLU 184 148 148 GLU GLU A . n A 1 185 GLN 185 149 149 GLN GLN A . n A 1 186 TYR 186 150 150 TYR TYR A . n A 1 187 VAL 187 151 151 VAL VAL A . n A 1 188 TRP 188 152 152 TRP TRP A . n A 1 189 GLU 189 153 153 GLU GLU A . n A 1 190 SER 190 154 154 SER SER A . n A 1 191 SER 191 155 155 SER SER A . n A 1 192 ALA 192 156 156 ALA ALA A . n A 1 193 GLY 193 157 157 GLY GLY A . n A 1 194 GLY 194 158 158 GLY GLY A . n A 1 195 GLU 195 159 159 GLU GLU A . n A 1 196 PHE 196 160 160 PHE PHE A . n A 1 197 THR 197 161 161 THR THR A . n A 1 198 ILE 198 162 162 ILE ILE A . n A 1 199 ALA 199 163 163 ALA ALA A . n A 1 200 LEU 200 164 164 LEU LEU A . n A 1 201 ASP 201 165 165 ASP ASP A . n A 1 202 HIS 202 166 166 HIS HIS A . n A 1 203 THR 203 167 167 THR THR A . n A 1 204 GLU 204 168 168 GLU GLU A . n A 1 205 PRO 205 169 169 PRO PRO A . n A 1 206 LEU 206 170 170 LEU LEU A . n A 1 207 GLY 207 171 171 GLY GLY A . n A 1 208 ARG 208 172 172 ARG ARG A . n A 1 209 GLY 209 173 173 GLY GLY A . n A 1 210 THR 210 174 174 THR THR A . n A 1 211 LYS 211 175 175 LYS LYS A . n A 1 212 ILE 212 176 176 ILE ILE A . n A 1 213 VAL 213 177 177 VAL VAL A . n A 1 214 LEU 214 178 178 LEU LEU A . n A 1 215 HIS 215 179 179 HIS HIS A . n A 1 216 MET 216 180 180 MET MET A . n A 1 217 LYS 217 181 181 LYS LYS A . n A 1 218 GLU 218 182 182 GLU GLU A . n A 1 219 ASP 219 183 183 ASP ASP A . n A 1 220 GLN 220 184 184 GLN GLN A . n A 1 221 LEU 221 185 185 LEU LEU A . n A 1 222 ASP 222 186 186 ASP ASP A . n A 1 223 TYR 223 187 187 TYR TYR A . n A 1 224 LEU 224 188 188 LEU LEU A . n A 1 225 ASP 225 189 189 ASP ASP A . n A 1 226 GLU 226 190 190 GLU GLU A . n A 1 227 THR 227 191 191 THR THR A . n A 1 228 LYS 228 192 192 LYS LYS A . n A 1 229 ILE 229 193 193 ILE ILE A . n A 1 230 LYS 230 194 194 LYS LYS A . n A 1 231 ASN 231 195 195 ASN ASN A . n A 1 232 LEU 232 196 196 LEU LEU A . n A 1 233 VAL 233 197 197 VAL VAL A . n A 1 234 LYS 234 198 198 LYS LYS A . n A 1 235 LYS 235 199 199 LYS LYS A . n A 1 236 HIS 236 200 200 HIS HIS A . n A 1 237 SER 237 201 201 SER SER A . n A 1 238 GLU 238 202 202 GLU GLU A . n A 1 239 PHE 239 203 203 PHE PHE A . n A 1 240 ILE 240 204 204 ILE ILE A . n A 1 241 GLN 241 205 205 GLN GLN A . n A 1 242 TYR 242 206 206 TYR TYR A . n A 1 243 PRO 243 207 207 PRO PRO A . n A 1 244 ILE 244 208 208 ILE ILE A . n A 1 245 SER 245 209 209 SER SER A . n A 1 246 LEU 246 210 210 LEU LEU A . n A 1 247 LEU 247 211 211 LEU LEU A . n A 1 248 THR 248 212 212 THR THR A . n A 1 249 ILE 249 213 213 ILE ILE A . n A 1 250 LYS 250 214 214 LYS LYS A . n A 1 251 GLU 251 215 215 GLU ALA A . n A 1 252 LYS 252 216 ? ? ? A . n A 1 253 GLU 253 217 ? ? ? A . n A 1 254 VAL 254 218 ? ? ? A . n A 1 255 ASP 255 219 ? ? ? A . n A 1 256 GLU 256 220 ? ? ? A . n A 1 257 GLU 257 221 ? ? ? A . n A 1 258 THR 258 222 ? ? ? A . n A 1 259 THR 259 223 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GDM 1 301 275 GDM GDM A . C 3 PEG 1 302 1 PEG PEG A . D 4 HOH 1 401 86 HOH HOH A . D 4 HOH 2 402 153 HOH HOH A . D 4 HOH 3 403 122 HOH HOH A . D 4 HOH 4 404 158 HOH HOH A . D 4 HOH 5 405 103 HOH HOH A . D 4 HOH 6 406 94 HOH HOH A . D 4 HOH 7 407 39 HOH HOH A . D 4 HOH 8 408 57 HOH HOH A . D 4 HOH 9 409 126 HOH HOH A . D 4 HOH 10 410 71 HOH HOH A . D 4 HOH 11 411 93 HOH HOH A . D 4 HOH 12 412 58 HOH HOH A . D 4 HOH 13 413 97 HOH HOH A . D 4 HOH 14 414 152 HOH HOH A . D 4 HOH 15 415 62 HOH HOH A . D 4 HOH 16 416 108 HOH HOH A . D 4 HOH 17 417 99 HOH HOH A . D 4 HOH 18 418 79 HOH HOH A . D 4 HOH 19 419 162 HOH HOH A . D 4 HOH 20 420 30 HOH HOH A . D 4 HOH 21 421 139 HOH HOH A . D 4 HOH 22 422 68 HOH HOH A . D 4 HOH 23 423 29 HOH HOH A . D 4 HOH 24 424 14 HOH HOH A . D 4 HOH 25 425 28 HOH HOH A . D 4 HOH 26 426 60 HOH HOH A . D 4 HOH 27 427 166 HOH HOH A . D 4 HOH 28 428 132 HOH HOH A . D 4 HOH 29 429 42 HOH HOH A . D 4 HOH 30 430 147 HOH HOH A . D 4 HOH 31 431 47 HOH HOH A . D 4 HOH 32 432 124 HOH HOH A . D 4 HOH 33 433 67 HOH HOH A . D 4 HOH 34 434 87 HOH HOH A . D 4 HOH 35 435 25 HOH HOH A . D 4 HOH 36 436 95 HOH HOH A . D 4 HOH 37 437 164 HOH HOH A . D 4 HOH 38 438 154 HOH HOH A . D 4 HOH 39 439 116 HOH HOH A . D 4 HOH 40 440 119 HOH HOH A . D 4 HOH 41 441 133 HOH HOH A . D 4 HOH 42 442 92 HOH HOH A . D 4 HOH 43 443 109 HOH HOH A . D 4 HOH 44 444 161 HOH HOH A . D 4 HOH 45 445 168 HOH HOH A . D 4 HOH 46 446 54 HOH HOH A . D 4 HOH 47 447 160 HOH HOH A . D 4 HOH 48 448 101 HOH HOH A . D 4 HOH 49 449 159 HOH HOH A . D 4 HOH 50 450 1 HOH HOH A . D 4 HOH 51 451 3 HOH HOH A . D 4 HOH 52 452 5 HOH HOH A . D 4 HOH 53 453 6 HOH HOH A . D 4 HOH 54 454 7 HOH HOH A . D 4 HOH 55 455 8 HOH HOH A . D 4 HOH 56 456 9 HOH HOH A . D 4 HOH 57 457 12 HOH HOH A . D 4 HOH 58 458 15 HOH HOH A . D 4 HOH 59 459 16 HOH HOH A . D 4 HOH 60 460 17 HOH HOH A . D 4 HOH 61 461 18 HOH HOH A . D 4 HOH 62 462 19 HOH HOH A . D 4 HOH 63 463 20 HOH HOH A . D 4 HOH 64 464 21 HOH HOH A . D 4 HOH 65 465 22 HOH HOH A . D 4 HOH 66 466 24 HOH HOH A . D 4 HOH 67 467 26 HOH HOH A . D 4 HOH 68 468 31 HOH HOH A . D 4 HOH 69 469 32 HOH HOH A . D 4 HOH 70 470 34 HOH HOH A . D 4 HOH 71 471 35 HOH HOH A . D 4 HOH 72 472 36 HOH HOH A . D 4 HOH 73 473 37 HOH HOH A . D 4 HOH 74 474 38 HOH HOH A . D 4 HOH 75 475 40 HOH HOH A . D 4 HOH 76 476 41 HOH HOH A . D 4 HOH 77 477 44 HOH HOH A . D 4 HOH 78 478 45 HOH HOH A . D 4 HOH 79 479 46 HOH HOH A . D 4 HOH 80 480 48 HOH HOH A . D 4 HOH 81 481 49 HOH HOH A . D 4 HOH 82 482 50 HOH HOH A . D 4 HOH 83 483 51 HOH HOH A . D 4 HOH 84 484 53 HOH HOH A . D 4 HOH 85 485 55 HOH HOH A . D 4 HOH 86 486 56 HOH HOH A . D 4 HOH 87 487 59 HOH HOH A . D 4 HOH 88 488 63 HOH HOH A . D 4 HOH 89 489 64 HOH HOH A . D 4 HOH 90 490 65 HOH HOH A . D 4 HOH 91 491 66 HOH HOH A . D 4 HOH 92 492 69 HOH HOH A . D 4 HOH 93 493 70 HOH HOH A . D 4 HOH 94 494 72 HOH HOH A . D 4 HOH 95 495 77 HOH HOH A . D 4 HOH 96 496 78 HOH HOH A . D 4 HOH 97 497 80 HOH HOH A . D 4 HOH 98 498 81 HOH HOH A . D 4 HOH 99 499 82 HOH HOH A . D 4 HOH 100 500 83 HOH HOH A . D 4 HOH 101 501 84 HOH HOH A . D 4 HOH 102 502 85 HOH HOH A . D 4 HOH 103 503 88 HOH HOH A . D 4 HOH 104 504 89 HOH HOH A . D 4 HOH 105 505 90 HOH HOH A . D 4 HOH 106 506 91 HOH HOH A . D 4 HOH 107 507 96 HOH HOH A . D 4 HOH 108 508 98 HOH HOH A . D 4 HOH 109 509 100 HOH HOH A . D 4 HOH 110 510 102 HOH HOH A . D 4 HOH 111 511 104 HOH HOH A . D 4 HOH 112 512 105 HOH HOH A . D 4 HOH 113 513 106 HOH HOH A . D 4 HOH 114 514 107 HOH HOH A . D 4 HOH 115 515 110 HOH HOH A . D 4 HOH 116 516 111 HOH HOH A . D 4 HOH 117 517 112 HOH HOH A . D 4 HOH 118 518 113 HOH HOH A . D 4 HOH 119 519 114 HOH HOH A . D 4 HOH 120 520 115 HOH HOH A . D 4 HOH 121 521 118 HOH HOH A . D 4 HOH 122 522 120 HOH HOH A . D 4 HOH 123 523 121 HOH HOH A . D 4 HOH 124 524 123 HOH HOH A . D 4 HOH 125 525 125 HOH HOH A . D 4 HOH 126 526 127 HOH HOH A . D 4 HOH 127 527 128 HOH HOH A . D 4 HOH 128 528 129 HOH HOH A . D 4 HOH 129 529 130 HOH HOH A . D 4 HOH 130 530 131 HOH HOH A . D 4 HOH 131 531 134 HOH HOH A . D 4 HOH 132 532 135 HOH HOH A . D 4 HOH 133 533 141 HOH HOH A . D 4 HOH 134 534 142 HOH HOH A . D 4 HOH 135 535 146 HOH HOH A . D 4 HOH 136 536 150 HOH HOH A . D 4 HOH 137 537 156 HOH HOH A . D 4 HOH 138 538 157 HOH HOH A . D 4 HOH 139 539 163 HOH HOH A . D 4 HOH 140 540 165 HOH HOH A . D 4 HOH 141 541 167 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 960 ? 1 MORE 2 ? 1 'SSA (A^2)' 10430 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-12-09 2 'Structure model' 1 1 2023-11-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_initial_refinement_model 5 2 'Structure model' pdbx_struct_oper_list # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' # _software.citation_id ? _software.classification refinement _software.compiler_name ? _software.compiler_version ? _software.contact_author ? _software.contact_author_email ? _software.date ? _software.description ? _software.dependencies ? _software.hardware ? _software.language ? _software.location ? _software.mods ? _software.name REFMAC _software.os ? _software.os_version ? _software.type ? _software.version 5.5.0109 _software.pdbx_ordinal 1 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 62 ? ? -176.10 114.03 2 1 ALA A 156 ? ? 65.79 -131.02 # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 540 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 6.84 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 94 ? CE ? A LYS 130 CE 2 1 Y 1 A LYS 94 ? NZ ? A LYS 130 NZ 3 1 Y 1 A SER 102 ? OG ? A SER 138 OG 4 1 Y 1 A LYS 105 ? CG ? A LYS 141 CG 5 1 Y 1 A LYS 105 ? CD ? A LYS 141 CD 6 1 Y 1 A LYS 105 ? CE ? A LYS 141 CE 7 1 Y 1 A LYS 105 ? NZ ? A LYS 141 NZ 8 1 Y 1 A GLN 112 ? CG ? A GLN 148 CG 9 1 Y 1 A GLN 112 ? CD ? A GLN 148 CD 10 1 Y 1 A GLN 112 ? OE1 ? A GLN 148 OE1 11 1 Y 1 A GLN 112 ? NE2 ? A GLN 148 NE2 12 1 Y 1 A LYS 192 ? NZ ? A LYS 228 NZ 13 1 Y 1 A LYS 194 ? NZ ? A LYS 230 NZ 14 1 Y 1 A GLU 215 ? CG ? A GLU 251 CG 15 1 Y 1 A GLU 215 ? CD ? A GLU 251 CD 16 1 Y 1 A GLU 215 ? OE1 ? A GLU 251 OE1 17 1 Y 1 A GLU 215 ? OE2 ? A GLU 251 OE2 18 1 N 1 A PEG 302 ? C1 ? C PEG 1 C1 19 1 N 1 A PEG 302 ? O1 ? C PEG 1 O1 20 1 N 1 A PEG 302 ? C2 ? C PEG 1 C2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -35 ? A MET 1 2 1 Y 1 A ARG -34 ? A ARG 2 3 1 Y 1 A GLY -33 ? A GLY 3 4 1 Y 1 A SER -32 ? A SER 4 5 1 Y 1 A HIS -31 ? A HIS 5 6 1 Y 1 A HIS -30 ? A HIS 6 7 1 Y 1 A HIS -29 ? A HIS 7 8 1 Y 1 A HIS -28 ? A HIS 8 9 1 Y 1 A HIS -27 ? A HIS 9 10 1 Y 1 A HIS -26 ? A HIS 10 11 1 Y 1 A GLY -25 ? A GLY 11 12 1 Y 1 A MET -24 ? A MET 12 13 1 Y 1 A ALA -23 ? A ALA 13 14 1 Y 1 A SER -22 ? A SER 14 15 1 Y 1 A MET -21 ? A MET 15 16 1 Y 1 A THR -20 ? A THR 16 17 1 Y 1 A GLY -19 ? A GLY 17 18 1 Y 1 A GLY -18 ? A GLY 18 19 1 Y 1 A GLN -17 ? A GLN 19 20 1 Y 1 A GLN -16 ? A GLN 20 21 1 Y 1 A MET -15 ? A MET 21 22 1 Y 1 A GLY -14 ? A GLY 22 23 1 Y 1 A ARG -13 ? A ARG 23 24 1 Y 1 A ASP -12 ? A ASP 24 25 1 Y 1 A LEU -11 ? A LEU 25 26 1 Y 1 A TYR -10 ? A TYR 26 27 1 Y 1 A ASP -9 ? A ASP 27 28 1 Y 1 A ASP -8 ? A ASP 28 29 1 Y 1 A ASP -7 ? A ASP 29 30 1 Y 1 A ASP -6 ? A ASP 30 31 1 Y 1 A LYS -5 ? A LYS 31 32 1 Y 1 A ASP -4 ? A ASP 32 33 1 Y 1 A ARG -3 ? A ARG 33 34 1 Y 1 A TRP -2 ? A TRP 34 35 1 Y 1 A GLY -1 ? A GLY 35 36 1 Y 1 A SER 0 ? A SER 36 37 1 Y 1 A LYS 216 ? A LYS 252 38 1 Y 1 A GLU 217 ? A GLU 253 39 1 Y 1 A VAL 218 ? A VAL 254 40 1 Y 1 A ASP 219 ? A ASP 255 41 1 Y 1 A GLU 220 ? A GLU 256 42 1 Y 1 A GLU 221 ? A GLU 257 43 1 Y 1 A THR 222 ? A THR 258 44 1 Y 1 A THR 223 ? A THR 259 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GDM O1 O N N 74 GDM O2 O N N 75 GDM O3 O N N 76 GDM O4 O N N 77 GDM O5 O N N 78 GDM O6 O N N 79 GDM O7 O N N 80 GDM O8 O N N 81 GDM O9 O N N 82 GDM N1 N N N 83 GDM N2 N N N 84 GDM C1 C N N 85 GDM C2 C N N 86 GDM C3 C N N 87 GDM C4 C N N 88 GDM C5 C N N 89 GDM C6 C N S 90 GDM C7 C N S 91 GDM C8 C N N 92 GDM C9 C N N 93 GDM C10 C N S 94 GDM C11 C N R 95 GDM C12 C N S 96 GDM C13 C N N 97 GDM C14 C N R 98 GDM C15 C N N 99 GDM C16 C N N 100 GDM C17 C N N 101 GDM C18 C N N 102 GDM C19 C N N 103 GDM C20 C N N 104 GDM C21 C N N 105 GDM C22 C N N 106 GDM C23 C N N 107 GDM C24 C N N 108 GDM C25 C N N 109 GDM C26 C N N 110 GDM C27 C N N 111 GDM C28 C N N 112 GDM C29 C N N 113 GDM HO5 H N N 114 GDM HN1 H N N 115 GDM HN21 H N N 116 GDM HN22 H N N 117 GDM H3 H N N 118 GDM H4 H N N 119 GDM H5 H N N 120 GDM H6 H N N 121 GDM H7 H N N 122 GDM H9 H N N 123 GDM H10 H N N 124 GDM H11 H N N 125 GDM H12 H N N 126 GDM H131 H N N 127 GDM H132 H N N 128 GDM H14 H N N 129 GDM H151 H N N 130 GDM H152 H N N 131 GDM H19 H N N 132 GDM H221 H N N 133 GDM H222 H N N 134 GDM H223 H N N 135 GDM H231 H N N 136 GDM H232 H N N 137 GDM H233 H N N 138 GDM H251 H N N 139 GDM H252 H N N 140 GDM H253 H N N 141 GDM H261 H N N 142 GDM H262 H N N 143 GDM H263 H N N 144 GDM H271 H N N 145 GDM H272 H N N 146 GDM H273 H N N 147 GDM H281 H N N 148 GDM H282 H N N 149 GDM H283 H N N 150 GDM H291 H N N 151 GDM H292 H N N 152 GDM H293 H N N 153 GLN N N N N 154 GLN CA C N S 155 GLN C C N N 156 GLN O O N N 157 GLN CB C N N 158 GLN CG C N N 159 GLN CD C N N 160 GLN OE1 O N N 161 GLN NE2 N N N 162 GLN OXT O N N 163 GLN H H N N 164 GLN H2 H N N 165 GLN HA H N N 166 GLN HB2 H N N 167 GLN HB3 H N N 168 GLN HG2 H N N 169 GLN HG3 H N N 170 GLN HE21 H N N 171 GLN HE22 H N N 172 GLN HXT H N N 173 GLU N N N N 174 GLU CA C N S 175 GLU C C N N 176 GLU O O N N 177 GLU CB C N N 178 GLU CG C N N 179 GLU CD C N N 180 GLU OE1 O N N 181 GLU OE2 O N N 182 GLU OXT O N N 183 GLU H H N N 184 GLU H2 H N N 185 GLU HA H N N 186 GLU HB2 H N N 187 GLU HB3 H N N 188 GLU HG2 H N N 189 GLU HG3 H N N 190 GLU HE2 H N N 191 GLU HXT H N N 192 GLY N N N N 193 GLY CA C N N 194 GLY C C N N 195 GLY O O N N 196 GLY OXT O N N 197 GLY H H N N 198 GLY H2 H N N 199 GLY HA2 H N N 200 GLY HA3 H N N 201 GLY HXT H N N 202 HIS N N N N 203 HIS CA C N S 204 HIS C C N N 205 HIS O O N N 206 HIS CB C N N 207 HIS CG C Y N 208 HIS ND1 N Y N 209 HIS CD2 C Y N 210 HIS CE1 C Y N 211 HIS NE2 N Y N 212 HIS OXT O N N 213 HIS H H N N 214 HIS H2 H N N 215 HIS HA H N N 216 HIS HB2 H N N 217 HIS HB3 H N N 218 HIS HD1 H N N 219 HIS HD2 H N N 220 HIS HE1 H N N 221 HIS HE2 H N N 222 HIS HXT H N N 223 HOH O O N N 224 HOH H1 H N N 225 HOH H2 H N N 226 ILE N N N N 227 ILE CA C N S 228 ILE C C N N 229 ILE O O N N 230 ILE CB C N S 231 ILE CG1 C N N 232 ILE CG2 C N N 233 ILE CD1 C N N 234 ILE OXT O N N 235 ILE H H N N 236 ILE H2 H N N 237 ILE HA H N N 238 ILE HB H N N 239 ILE HG12 H N N 240 ILE HG13 H N N 241 ILE HG21 H N N 242 ILE HG22 H N N 243 ILE HG23 H N N 244 ILE HD11 H N N 245 ILE HD12 H N N 246 ILE HD13 H N N 247 ILE HXT H N N 248 LEU N N N N 249 LEU CA C N S 250 LEU C C N N 251 LEU O O N N 252 LEU CB C N N 253 LEU CG C N N 254 LEU CD1 C N N 255 LEU CD2 C N N 256 LEU OXT O N N 257 LEU H H N N 258 LEU H2 H N N 259 LEU HA H N N 260 LEU HB2 H N N 261 LEU HB3 H N N 262 LEU HG H N N 263 LEU HD11 H N N 264 LEU HD12 H N N 265 LEU HD13 H N N 266 LEU HD21 H N N 267 LEU HD22 H N N 268 LEU HD23 H N N 269 LEU HXT H N N 270 LYS N N N N 271 LYS CA C N S 272 LYS C C N N 273 LYS O O N N 274 LYS CB C N N 275 LYS CG C N N 276 LYS CD C N N 277 LYS CE C N N 278 LYS NZ N N N 279 LYS OXT O N N 280 LYS H H N N 281 LYS H2 H N N 282 LYS HA H N N 283 LYS HB2 H N N 284 LYS HB3 H N N 285 LYS HG2 H N N 286 LYS HG3 H N N 287 LYS HD2 H N N 288 LYS HD3 H N N 289 LYS HE2 H N N 290 LYS HE3 H N N 291 LYS HZ1 H N N 292 LYS HZ2 H N N 293 LYS HZ3 H N N 294 LYS HXT H N N 295 MET N N N N 296 MET CA C N S 297 MET C C N N 298 MET O O N N 299 MET CB C N N 300 MET CG C N N 301 MET SD S N N 302 MET CE C N N 303 MET OXT O N N 304 MET H H N N 305 MET H2 H N N 306 MET HA H N N 307 MET HB2 H N N 308 MET HB3 H N N 309 MET HG2 H N N 310 MET HG3 H N N 311 MET HE1 H N N 312 MET HE2 H N N 313 MET HE3 H N N 314 MET HXT H N N 315 PEG C1 C N N 316 PEG O1 O N N 317 PEG C2 C N N 318 PEG O2 O N N 319 PEG C3 C N N 320 PEG C4 C N N 321 PEG O4 O N N 322 PEG H11 H N N 323 PEG H12 H N N 324 PEG HO1 H N N 325 PEG H21 H N N 326 PEG H22 H N N 327 PEG H31 H N N 328 PEG H32 H N N 329 PEG H41 H N N 330 PEG H42 H N N 331 PEG HO4 H N N 332 PHE N N N N 333 PHE CA C N S 334 PHE C C N N 335 PHE O O N N 336 PHE CB C N N 337 PHE CG C Y N 338 PHE CD1 C Y N 339 PHE CD2 C Y N 340 PHE CE1 C Y N 341 PHE CE2 C Y N 342 PHE CZ C Y N 343 PHE OXT O N N 344 PHE H H N N 345 PHE H2 H N N 346 PHE HA H N N 347 PHE HB2 H N N 348 PHE HB3 H N N 349 PHE HD1 H N N 350 PHE HD2 H N N 351 PHE HE1 H N N 352 PHE HE2 H N N 353 PHE HZ H N N 354 PHE HXT H N N 355 PRO N N N N 356 PRO CA C N S 357 PRO C C N N 358 PRO O O N N 359 PRO CB C N N 360 PRO CG C N N 361 PRO CD C N N 362 PRO OXT O N N 363 PRO H H N N 364 PRO HA H N N 365 PRO HB2 H N N 366 PRO HB3 H N N 367 PRO HG2 H N N 368 PRO HG3 H N N 369 PRO HD2 H N N 370 PRO HD3 H N N 371 PRO HXT H N N 372 SER N N N N 373 SER CA C N S 374 SER C C N N 375 SER O O N N 376 SER CB C N N 377 SER OG O N N 378 SER OXT O N N 379 SER H H N N 380 SER H2 H N N 381 SER HA H N N 382 SER HB2 H N N 383 SER HB3 H N N 384 SER HG H N N 385 SER HXT H N N 386 THR N N N N 387 THR CA C N S 388 THR C C N N 389 THR O O N N 390 THR CB C N R 391 THR OG1 O N N 392 THR CG2 C N N 393 THR OXT O N N 394 THR H H N N 395 THR H2 H N N 396 THR HA H N N 397 THR HB H N N 398 THR HG1 H N N 399 THR HG21 H N N 400 THR HG22 H N N 401 THR HG23 H N N 402 THR HXT H N N 403 TRP N N N N 404 TRP CA C N S 405 TRP C C N N 406 TRP O O N N 407 TRP CB C N N 408 TRP CG C Y N 409 TRP CD1 C Y N 410 TRP CD2 C Y N 411 TRP NE1 N Y N 412 TRP CE2 C Y N 413 TRP CE3 C Y N 414 TRP CZ2 C Y N 415 TRP CZ3 C Y N 416 TRP CH2 C Y N 417 TRP OXT O N N 418 TRP H H N N 419 TRP H2 H N N 420 TRP HA H N N 421 TRP HB2 H N N 422 TRP HB3 H N N 423 TRP HD1 H N N 424 TRP HE1 H N N 425 TRP HE3 H N N 426 TRP HZ2 H N N 427 TRP HZ3 H N N 428 TRP HH2 H N N 429 TRP HXT H N N 430 TYR N N N N 431 TYR CA C N S 432 TYR C C N N 433 TYR O O N N 434 TYR CB C N N 435 TYR CG C Y N 436 TYR CD1 C Y N 437 TYR CD2 C Y N 438 TYR CE1 C Y N 439 TYR CE2 C Y N 440 TYR CZ C Y N 441 TYR OH O N N 442 TYR OXT O N N 443 TYR H H N N 444 TYR H2 H N N 445 TYR HA H N N 446 TYR HB2 H N N 447 TYR HB3 H N N 448 TYR HD1 H N N 449 TYR HD2 H N N 450 TYR HE1 H N N 451 TYR HE2 H N N 452 TYR HH H N N 453 TYR HXT H N N 454 VAL N N N N 455 VAL CA C N S 456 VAL C C N N 457 VAL O O N N 458 VAL CB C N N 459 VAL CG1 C N N 460 VAL CG2 C N N 461 VAL OXT O N N 462 VAL H H N N 463 VAL H2 H N N 464 VAL HA H N N 465 VAL HB H N N 466 VAL HG11 H N N 467 VAL HG12 H N N 468 VAL HG13 H N N 469 VAL HG21 H N N 470 VAL HG22 H N N 471 VAL HG23 H N N 472 VAL HXT H N N 473 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GDM O1 C1 doub N N 70 GDM O2 C6 sing N N 71 GDM O2 C23 sing N N 72 GDM O3 C7 sing N N 73 GDM O3 C24 sing N N 74 GDM O4 C24 doub N N 75 GDM O5 C11 sing N N 76 GDM O5 HO5 sing N N 77 GDM O6 C12 sing N N 78 GDM O6 C27 sing N N 79 GDM O7 C17 sing N N 80 GDM O7 C29 sing N N 81 GDM O8 C18 doub N N 82 GDM O9 C21 doub N N 83 GDM N1 C1 sing N N 84 GDM N1 C20 sing N N 85 GDM N1 HN1 sing N N 86 GDM N2 C24 sing N N 87 GDM N2 HN21 sing N N 88 GDM N2 HN22 sing N N 89 GDM C1 C2 sing N N 90 GDM C2 C3 doub N E 91 GDM C2 C22 sing N N 92 GDM C3 C4 sing N N 93 GDM C3 H3 sing N N 94 GDM C4 C5 doub N Z 95 GDM C4 H4 sing N N 96 GDM C5 C6 sing N N 97 GDM C5 H5 sing N N 98 GDM C6 C7 sing N N 99 GDM C6 H6 sing N N 100 GDM C7 C8 sing N N 101 GDM C7 H7 sing N N 102 GDM C8 C9 doub N E 103 GDM C8 C25 sing N N 104 GDM C9 C10 sing N N 105 GDM C9 H9 sing N N 106 GDM C10 C11 sing N N 107 GDM C10 C26 sing N N 108 GDM C10 H10 sing N N 109 GDM C11 C12 sing N N 110 GDM C11 H11 sing N N 111 GDM C12 C13 sing N N 112 GDM C12 H12 sing N N 113 GDM C13 C14 sing N N 114 GDM C13 H131 sing N N 115 GDM C13 H132 sing N N 116 GDM C14 C15 sing N N 117 GDM C14 C28 sing N N 118 GDM C14 H14 sing N N 119 GDM C15 C16 sing N N 120 GDM C15 H151 sing N N 121 GDM C15 H152 sing N N 122 GDM C16 C17 doub N N 123 GDM C16 C21 sing N N 124 GDM C17 C18 sing N N 125 GDM C18 C19 sing N N 126 GDM C19 C20 doub N N 127 GDM C19 H19 sing N N 128 GDM C20 C21 sing N N 129 GDM C22 H221 sing N N 130 GDM C22 H222 sing N N 131 GDM C22 H223 sing N N 132 GDM C23 H231 sing N N 133 GDM C23 H232 sing N N 134 GDM C23 H233 sing N N 135 GDM C25 H251 sing N N 136 GDM C25 H252 sing N N 137 GDM C25 H253 sing N N 138 GDM C26 H261 sing N N 139 GDM C26 H262 sing N N 140 GDM C26 H263 sing N N 141 GDM C27 H271 sing N N 142 GDM C27 H272 sing N N 143 GDM C27 H273 sing N N 144 GDM C28 H281 sing N N 145 GDM C28 H282 sing N N 146 GDM C28 H283 sing N N 147 GDM C29 H291 sing N N 148 GDM C29 H292 sing N N 149 GDM C29 H293 sing N N 150 GLN N CA sing N N 151 GLN N H sing N N 152 GLN N H2 sing N N 153 GLN CA C sing N N 154 GLN CA CB sing N N 155 GLN CA HA sing N N 156 GLN C O doub N N 157 GLN C OXT sing N N 158 GLN CB CG sing N N 159 GLN CB HB2 sing N N 160 GLN CB HB3 sing N N 161 GLN CG CD sing N N 162 GLN CG HG2 sing N N 163 GLN CG HG3 sing N N 164 GLN CD OE1 doub N N 165 GLN CD NE2 sing N N 166 GLN NE2 HE21 sing N N 167 GLN NE2 HE22 sing N N 168 GLN OXT HXT sing N N 169 GLU N CA sing N N 170 GLU N H sing N N 171 GLU N H2 sing N N 172 GLU CA C sing N N 173 GLU CA CB sing N N 174 GLU CA HA sing N N 175 GLU C O doub N N 176 GLU C OXT sing N N 177 GLU CB CG sing N N 178 GLU CB HB2 sing N N 179 GLU CB HB3 sing N N 180 GLU CG CD sing N N 181 GLU CG HG2 sing N N 182 GLU CG HG3 sing N N 183 GLU CD OE1 doub N N 184 GLU CD OE2 sing N N 185 GLU OE2 HE2 sing N N 186 GLU OXT HXT sing N N 187 GLY N CA sing N N 188 GLY N H sing N N 189 GLY N H2 sing N N 190 GLY CA C sing N N 191 GLY CA HA2 sing N N 192 GLY CA HA3 sing N N 193 GLY C O doub N N 194 GLY C OXT sing N N 195 GLY OXT HXT sing N N 196 HIS N CA sing N N 197 HIS N H sing N N 198 HIS N H2 sing N N 199 HIS CA C sing N N 200 HIS CA CB sing N N 201 HIS CA HA sing N N 202 HIS C O doub N N 203 HIS C OXT sing N N 204 HIS CB CG sing N N 205 HIS CB HB2 sing N N 206 HIS CB HB3 sing N N 207 HIS CG ND1 sing Y N 208 HIS CG CD2 doub Y N 209 HIS ND1 CE1 doub Y N 210 HIS ND1 HD1 sing N N 211 HIS CD2 NE2 sing Y N 212 HIS CD2 HD2 sing N N 213 HIS CE1 NE2 sing Y N 214 HIS CE1 HE1 sing N N 215 HIS NE2 HE2 sing N N 216 HIS OXT HXT sing N N 217 HOH O H1 sing N N 218 HOH O H2 sing N N 219 ILE N CA sing N N 220 ILE N H sing N N 221 ILE N H2 sing N N 222 ILE CA C sing N N 223 ILE CA CB sing N N 224 ILE CA HA sing N N 225 ILE C O doub N N 226 ILE C OXT sing N N 227 ILE CB CG1 sing N N 228 ILE CB CG2 sing N N 229 ILE CB HB sing N N 230 ILE CG1 CD1 sing N N 231 ILE CG1 HG12 sing N N 232 ILE CG1 HG13 sing N N 233 ILE CG2 HG21 sing N N 234 ILE CG2 HG22 sing N N 235 ILE CG2 HG23 sing N N 236 ILE CD1 HD11 sing N N 237 ILE CD1 HD12 sing N N 238 ILE CD1 HD13 sing N N 239 ILE OXT HXT sing N N 240 LEU N CA sing N N 241 LEU N H sing N N 242 LEU N H2 sing N N 243 LEU CA C sing N N 244 LEU CA CB sing N N 245 LEU CA HA sing N N 246 LEU C O doub N N 247 LEU C OXT sing N N 248 LEU CB CG sing N N 249 LEU CB HB2 sing N N 250 LEU CB HB3 sing N N 251 LEU CG CD1 sing N N 252 LEU CG CD2 sing N N 253 LEU CG HG sing N N 254 LEU CD1 HD11 sing N N 255 LEU CD1 HD12 sing N N 256 LEU CD1 HD13 sing N N 257 LEU CD2 HD21 sing N N 258 LEU CD2 HD22 sing N N 259 LEU CD2 HD23 sing N N 260 LEU OXT HXT sing N N 261 LYS N CA sing N N 262 LYS N H sing N N 263 LYS N H2 sing N N 264 LYS CA C sing N N 265 LYS CA CB sing N N 266 LYS CA HA sing N N 267 LYS C O doub N N 268 LYS C OXT sing N N 269 LYS CB CG sing N N 270 LYS CB HB2 sing N N 271 LYS CB HB3 sing N N 272 LYS CG CD sing N N 273 LYS CG HG2 sing N N 274 LYS CG HG3 sing N N 275 LYS CD CE sing N N 276 LYS CD HD2 sing N N 277 LYS CD HD3 sing N N 278 LYS CE NZ sing N N 279 LYS CE HE2 sing N N 280 LYS CE HE3 sing N N 281 LYS NZ HZ1 sing N N 282 LYS NZ HZ2 sing N N 283 LYS NZ HZ3 sing N N 284 LYS OXT HXT sing N N 285 MET N CA sing N N 286 MET N H sing N N 287 MET N H2 sing N N 288 MET CA C sing N N 289 MET CA CB sing N N 290 MET CA HA sing N N 291 MET C O doub N N 292 MET C OXT sing N N 293 MET CB CG sing N N 294 MET CB HB2 sing N N 295 MET CB HB3 sing N N 296 MET CG SD sing N N 297 MET CG HG2 sing N N 298 MET CG HG3 sing N N 299 MET SD CE sing N N 300 MET CE HE1 sing N N 301 MET CE HE2 sing N N 302 MET CE HE3 sing N N 303 MET OXT HXT sing N N 304 PEG C1 O1 sing N N 305 PEG C1 C2 sing N N 306 PEG C1 H11 sing N N 307 PEG C1 H12 sing N N 308 PEG O1 HO1 sing N N 309 PEG C2 O2 sing N N 310 PEG C2 H21 sing N N 311 PEG C2 H22 sing N N 312 PEG O2 C3 sing N N 313 PEG C3 C4 sing N N 314 PEG C3 H31 sing N N 315 PEG C3 H32 sing N N 316 PEG C4 O4 sing N N 317 PEG C4 H41 sing N N 318 PEG C4 H42 sing N N 319 PEG O4 HO4 sing N N 320 PHE N CA sing N N 321 PHE N H sing N N 322 PHE N H2 sing N N 323 PHE CA C sing N N 324 PHE CA CB sing N N 325 PHE CA HA sing N N 326 PHE C O doub N N 327 PHE C OXT sing N N 328 PHE CB CG sing N N 329 PHE CB HB2 sing N N 330 PHE CB HB3 sing N N 331 PHE CG CD1 doub Y N 332 PHE CG CD2 sing Y N 333 PHE CD1 CE1 sing Y N 334 PHE CD1 HD1 sing N N 335 PHE CD2 CE2 doub Y N 336 PHE CD2 HD2 sing N N 337 PHE CE1 CZ doub Y N 338 PHE CE1 HE1 sing N N 339 PHE CE2 CZ sing Y N 340 PHE CE2 HE2 sing N N 341 PHE CZ HZ sing N N 342 PHE OXT HXT sing N N 343 PRO N CA sing N N 344 PRO N CD sing N N 345 PRO N H sing N N 346 PRO CA C sing N N 347 PRO CA CB sing N N 348 PRO CA HA sing N N 349 PRO C O doub N N 350 PRO C OXT sing N N 351 PRO CB CG sing N N 352 PRO CB HB2 sing N N 353 PRO CB HB3 sing N N 354 PRO CG CD sing N N 355 PRO CG HG2 sing N N 356 PRO CG HG3 sing N N 357 PRO CD HD2 sing N N 358 PRO CD HD3 sing N N 359 PRO OXT HXT sing N N 360 SER N CA sing N N 361 SER N H sing N N 362 SER N H2 sing N N 363 SER CA C sing N N 364 SER CA CB sing N N 365 SER CA HA sing N N 366 SER C O doub N N 367 SER C OXT sing N N 368 SER CB OG sing N N 369 SER CB HB2 sing N N 370 SER CB HB3 sing N N 371 SER OG HG sing N N 372 SER OXT HXT sing N N 373 THR N CA sing N N 374 THR N H sing N N 375 THR N H2 sing N N 376 THR CA C sing N N 377 THR CA CB sing N N 378 THR CA HA sing N N 379 THR C O doub N N 380 THR C OXT sing N N 381 THR CB OG1 sing N N 382 THR CB CG2 sing N N 383 THR CB HB sing N N 384 THR OG1 HG1 sing N N 385 THR CG2 HG21 sing N N 386 THR CG2 HG22 sing N N 387 THR CG2 HG23 sing N N 388 THR OXT HXT sing N N 389 TRP N CA sing N N 390 TRP N H sing N N 391 TRP N H2 sing N N 392 TRP CA C sing N N 393 TRP CA CB sing N N 394 TRP CA HA sing N N 395 TRP C O doub N N 396 TRP C OXT sing N N 397 TRP CB CG sing N N 398 TRP CB HB2 sing N N 399 TRP CB HB3 sing N N 400 TRP CG CD1 doub Y N 401 TRP CG CD2 sing Y N 402 TRP CD1 NE1 sing Y N 403 TRP CD1 HD1 sing N N 404 TRP CD2 CE2 doub Y N 405 TRP CD2 CE3 sing Y N 406 TRP NE1 CE2 sing Y N 407 TRP NE1 HE1 sing N N 408 TRP CE2 CZ2 sing Y N 409 TRP CE3 CZ3 doub Y N 410 TRP CE3 HE3 sing N N 411 TRP CZ2 CH2 doub Y N 412 TRP CZ2 HZ2 sing N N 413 TRP CZ3 CH2 sing Y N 414 TRP CZ3 HZ3 sing N N 415 TRP CH2 HH2 sing N N 416 TRP OXT HXT sing N N 417 TYR N CA sing N N 418 TYR N H sing N N 419 TYR N H2 sing N N 420 TYR CA C sing N N 421 TYR CA CB sing N N 422 TYR CA HA sing N N 423 TYR C O doub N N 424 TYR C OXT sing N N 425 TYR CB CG sing N N 426 TYR CB HB2 sing N N 427 TYR CB HB3 sing N N 428 TYR CG CD1 doub Y N 429 TYR CG CD2 sing Y N 430 TYR CD1 CE1 sing Y N 431 TYR CD1 HD1 sing N N 432 TYR CD2 CE2 doub Y N 433 TYR CD2 HD2 sing N N 434 TYR CE1 CZ doub Y N 435 TYR CE1 HE1 sing N N 436 TYR CE2 CZ sing Y N 437 TYR CE2 HE2 sing N N 438 TYR CZ OH sing N N 439 TYR OH HH sing N N 440 TYR OXT HXT sing N N 441 VAL N CA sing N N 442 VAL N H sing N N 443 VAL N H2 sing N N 444 VAL CA C sing N N 445 VAL CA CB sing N N 446 VAL CA HA sing N N 447 VAL C O doub N N 448 VAL C OXT sing N N 449 VAL CB CG1 sing N N 450 VAL CB CG2 sing N N 451 VAL CB HB sing N N 452 VAL CG1 HG11 sing N N 453 VAL CG1 HG12 sing N N 454 VAL CG1 HG13 sing N N 455 VAL CG2 HG21 sing N N 456 VAL CG2 HG22 sing N N 457 VAL CG2 HG23 sing N N 458 VAL OXT HXT sing N N 459 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 GELDANAMYCIN GDM 3 'DI(HYDROXYETHYL)ETHER' PEG 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4XCJ _pdbx_initial_refinement_model.details ? #