data_5AGR # _entry.id 5AGR # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5AGR pdb_00005agr 10.2210/pdb5agr/pdb PDBE EBI-62937 ? ? WWPDB D_1290062937 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-03-02 2 'Structure model' 1 1 2016-08-24 3 'Structure model' 1 2 2016-10-05 4 'Structure model' 1 3 2018-06-20 5 'Structure model' 1 4 2024-01-10 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' Advisory 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Database references' 8 5 'Structure model' 'Derived calculations' 9 5 'Structure model' Other 10 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' pdbx_unobs_or_zero_occ_atoms 2 4 'Structure model' pdbx_validate_close_contact 3 4 'Structure model' struct_conn 4 5 'Structure model' chem_comp_atom 5 5 'Structure model' chem_comp_bond 6 5 'Structure model' database_2 7 5 'Structure model' pdbx_database_status 8 5 'Structure model' pdbx_initial_refinement_model 9 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_pdbx_database_status.status_code_sf' 4 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 5AGR _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2015-02-03 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 5AGS unspecified 'CRYSTAL STRUCTURE OF THE LEURS EDITING DOMAIN OF MYCOBACTERIUM TUBERCULOSIS IN COMPLEX WITH THE ADDUCT AN5634-AMP' PDB 5AGT unspecified 'CRYSTAL STRUCTURE OF THE LEURS EDITING DOMAIN OF MYCOBACTERIUM TUBERCULOSIS IN COMPLEX WITH THE ADDUCT AN6426-AMP' # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Palencia, A.' 1 'Li, X.' 2 'Alley, M.R.K.' 3 'Ding, C.' 4 'Easom, E.E.' 5 'Hernandez, V.' 6 'Meewan, M.' 7 'Mohan, M.' 8 'Rock, F.L.' 9 'Franzblau, S.G.' 10 'Wang, Y.' 11 'Lenaerts, A.J.' 12 'Parish, T.' 13 'Cooper, C.B.' 14 'Waters, M.G.' 15 'Ma, Z.' 16 'Mendoza, A.' 17 'Barros, D.' 18 'Cusack, S.' 19 'Plattner, J.J.' 20 # _citation.id primary _citation.title 'Discovery of Novel Oral Protein Synthesis Inhibitors of Mycobacterium Tuberculosis that Target Leucyl-tRNA Synthetase.' _citation.journal_abbrev 'Antimicrob.Agents Chemother.' _citation.journal_volume 60 _citation.page_first 6271 _citation.page_last ? _citation.year 2016 _citation.journal_id_ASTM AMACCQ _citation.country US _citation.journal_id_ISSN 0066-4804 _citation.journal_id_CSD 0788 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 27503647 _citation.pdbx_database_id_DOI 10.1128/AAC.01339-16 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Palencia, A.' 1 ? primary 'Li, X.' 2 ? primary 'Bu, W.' 3 ? primary 'Choi, W.' 4 ? primary 'Ding, C.Z.' 5 ? primary 'Easom, E.E.' 6 ? primary 'Feng, L.' 7 ? primary 'Hernandez, V.' 8 ? primary 'Houston, P.' 9 ? primary 'Liu, L.' 10 ? primary 'Meewan, M.' 11 ? primary 'Mohan, M.' 12 ? primary 'Rock, F.L.' 13 ? primary 'Sexton, H.' 14 ? primary 'Zhang, S.' 15 ? primary 'Zhou, Y.' 16 ? primary 'Wan, B.' 17 ? primary 'Wang, Y.' 18 ? primary 'Franzblau, S.G.' 19 ? primary 'Woolhiser, L.' 20 ? primary 'Gruppo, V.' 21 ? primary 'Lenaerts, A.J.' 22 ? primary ;O'Malley, T. ; 23 ? primary 'Parish, T.' 24 ? primary 'Cooper, C.B.' 25 ? primary 'Waters, M.G.' 26 ? primary 'Ma, Z.' 27 ? primary 'Ioerger, T.R.' 28 ? primary 'Sacchettini, J.C.' 29 ? primary 'Rullas, J.' 30 ? primary 'Angulo-Barturen, I.' 31 ? primary 'Perez-Herran, E.' 32 ? primary 'Mendoza, A.' 33 ? primary 'Barros, D.' 34 ? primary 'Cusack, S.' 35 ? primary 'Plattner, J.J.' 36 ? primary 'Alley, M.R.K.' 37 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'LEUCINE--TRNA LIGASE' 24890.756 1 6.1.1.4 ? 'EDITING DOMAIN (CP1), RESIDUES 309-513' ? 2 non-polymer syn METHIONINE 149.211 1 ? ? ? ? 3 non-polymer syn LEUCINE 131.173 1 ? ? ? ? 4 non-polymer syn '3-AMINOMETHYL-7-(ETHOXY)-3H-BENZO[C][1,2]OXABOROL-1-OL modified adenosine' 533.216 1 ? ? ? ? 5 non-polymer syn 1,2-ETHANEDIOL 62.068 1 ? ? ? ? 6 water nat water 18.015 267 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'LEUCYL-TRNA SYNTHETASE, LEURS, LEUCYL-TRNA SYNTHETASE' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MKHHHHHHPMSDYDIPTTENLYFQGAMGRSTGAVALFSARAASDDGFEVDIEVFTTRPDTLFGATYLVLAPEHDLVDELV AASWPAGVNPLWTYGGGTPGEAIAAYRRAIAAKSDLERQESREKTGVFLGSYAINPANGEPVPIFIADYVLAGYGTGAIM AVPGHDQRDWDFARAFGLPIVEVIAGGNISESAYTGDGILVNSDYLNGMSVPAAKRAIVDRLESAGRGRARI ; _entity_poly.pdbx_seq_one_letter_code_can ;MKHHHHHHPMSDYDIPTTENLYFQGAMGRSTGAVALFSARAASDDGFEVDIEVFTTRPDTLFGATYLVLAPEHDLVDELV AASWPAGVNPLWTYGGGTPGEAIAAYRRAIAAKSDLERQESREKTGVFLGSYAINPANGEPVPIFIADYVLAGYGTGAIM AVPGHDQRDWDFARAFGLPIVEVIAGGNISESAYTGDGILVNSDYLNGMSVPAAKRAIVDRLESAGRGRARI ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 METHIONINE MET 3 LEUCINE LEU 4 '3-AMINOMETHYL-7-(ETHOXY)-3H-BENZO[C][1,2]OXABOROL-1-OL modified adenosine' A52 5 1,2-ETHANEDIOL EDO 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LYS n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 PRO n 1 10 MET n 1 11 SER n 1 12 ASP n 1 13 TYR n 1 14 ASP n 1 15 ILE n 1 16 PRO n 1 17 THR n 1 18 THR n 1 19 GLU n 1 20 ASN n 1 21 LEU n 1 22 TYR n 1 23 PHE n 1 24 GLN n 1 25 GLY n 1 26 ALA n 1 27 MET n 1 28 GLY n 1 29 ARG n 1 30 SER n 1 31 THR n 1 32 GLY n 1 33 ALA n 1 34 VAL n 1 35 ALA n 1 36 LEU n 1 37 PHE n 1 38 SER n 1 39 ALA n 1 40 ARG n 1 41 ALA n 1 42 ALA n 1 43 SER n 1 44 ASP n 1 45 ASP n 1 46 GLY n 1 47 PHE n 1 48 GLU n 1 49 VAL n 1 50 ASP n 1 51 ILE n 1 52 GLU n 1 53 VAL n 1 54 PHE n 1 55 THR n 1 56 THR n 1 57 ARG n 1 58 PRO n 1 59 ASP n 1 60 THR n 1 61 LEU n 1 62 PHE n 1 63 GLY n 1 64 ALA n 1 65 THR n 1 66 TYR n 1 67 LEU n 1 68 VAL n 1 69 LEU n 1 70 ALA n 1 71 PRO n 1 72 GLU n 1 73 HIS n 1 74 ASP n 1 75 LEU n 1 76 VAL n 1 77 ASP n 1 78 GLU n 1 79 LEU n 1 80 VAL n 1 81 ALA n 1 82 ALA n 1 83 SER n 1 84 TRP n 1 85 PRO n 1 86 ALA n 1 87 GLY n 1 88 VAL n 1 89 ASN n 1 90 PRO n 1 91 LEU n 1 92 TRP n 1 93 THR n 1 94 TYR n 1 95 GLY n 1 96 GLY n 1 97 GLY n 1 98 THR n 1 99 PRO n 1 100 GLY n 1 101 GLU n 1 102 ALA n 1 103 ILE n 1 104 ALA n 1 105 ALA n 1 106 TYR n 1 107 ARG n 1 108 ARG n 1 109 ALA n 1 110 ILE n 1 111 ALA n 1 112 ALA n 1 113 LYS n 1 114 SER n 1 115 ASP n 1 116 LEU n 1 117 GLU n 1 118 ARG n 1 119 GLN n 1 120 GLU n 1 121 SER n 1 122 ARG n 1 123 GLU n 1 124 LYS n 1 125 THR n 1 126 GLY n 1 127 VAL n 1 128 PHE n 1 129 LEU n 1 130 GLY n 1 131 SER n 1 132 TYR n 1 133 ALA n 1 134 ILE n 1 135 ASN n 1 136 PRO n 1 137 ALA n 1 138 ASN n 1 139 GLY n 1 140 GLU n 1 141 PRO n 1 142 VAL n 1 143 PRO n 1 144 ILE n 1 145 PHE n 1 146 ILE n 1 147 ALA n 1 148 ASP n 1 149 TYR n 1 150 VAL n 1 151 LEU n 1 152 ALA n 1 153 GLY n 1 154 TYR n 1 155 GLY n 1 156 THR n 1 157 GLY n 1 158 ALA n 1 159 ILE n 1 160 MET n 1 161 ALA n 1 162 VAL n 1 163 PRO n 1 164 GLY n 1 165 HIS n 1 166 ASP n 1 167 GLN n 1 168 ARG n 1 169 ASP n 1 170 TRP n 1 171 ASP n 1 172 PHE n 1 173 ALA n 1 174 ARG n 1 175 ALA n 1 176 PHE n 1 177 GLY n 1 178 LEU n 1 179 PRO n 1 180 ILE n 1 181 VAL n 1 182 GLU n 1 183 VAL n 1 184 ILE n 1 185 ALA n 1 186 GLY n 1 187 GLY n 1 188 ASN n 1 189 ILE n 1 190 SER n 1 191 GLU n 1 192 SER n 1 193 ALA n 1 194 TYR n 1 195 THR n 1 196 GLY n 1 197 ASP n 1 198 GLY n 1 199 ILE n 1 200 LEU n 1 201 VAL n 1 202 ASN n 1 203 SER n 1 204 ASP n 1 205 TYR n 1 206 LEU n 1 207 ASN n 1 208 GLY n 1 209 MET n 1 210 SER n 1 211 VAL n 1 212 PRO n 1 213 ALA n 1 214 ALA n 1 215 LYS n 1 216 ARG n 1 217 ALA n 1 218 ILE n 1 219 VAL n 1 220 ASP n 1 221 ARG n 1 222 LEU n 1 223 GLU n 1 224 SER n 1 225 ALA n 1 226 GLY n 1 227 ARG n 1 228 GLY n 1 229 ARG n 1 230 ALA n 1 231 ARG n 1 232 ILE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain H37RV _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'MYCOBACTERIUM TUBERCULOSIS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 83332 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc 25618 _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant RIL _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PETM-11 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A52 non-polymer . '3-AMINOMETHYL-7-(ETHOXY)-3H-BENZO[C][1,2]OXABOROL-1-OL modified adenosine' ? 'C20 H23 B N6 O9 P -3' 533.216 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 282 ? ? ? A . n A 1 2 LYS 2 283 ? ? ? A . n A 1 3 HIS 3 284 ? ? ? A . n A 1 4 HIS 4 285 ? ? ? A . n A 1 5 HIS 5 286 ? ? ? A . n A 1 6 HIS 6 287 ? ? ? A . n A 1 7 HIS 7 288 ? ? ? A . n A 1 8 HIS 8 289 ? ? ? A . n A 1 9 PRO 9 290 ? ? ? A . n A 1 10 MET 10 291 ? ? ? A . n A 1 11 SER 11 292 ? ? ? A . n A 1 12 ASP 12 293 ? ? ? A . n A 1 13 TYR 13 294 ? ? ? A . n A 1 14 ASP 14 295 ? ? ? A . n A 1 15 ILE 15 296 ? ? ? A . n A 1 16 PRO 16 297 ? ? ? A . n A 1 17 THR 17 298 ? ? ? A . n A 1 18 THR 18 299 ? ? ? A . n A 1 19 GLU 19 300 ? ? ? A . n A 1 20 ASN 20 301 ? ? ? A . n A 1 21 LEU 21 302 ? ? ? A . n A 1 22 TYR 22 303 ? ? ? A . n A 1 23 PHE 23 304 ? ? ? A . n A 1 24 GLN 24 305 ? ? ? A . n A 1 25 GLY 25 306 ? ? ? A . n A 1 26 ALA 26 307 ? ? ? A . n A 1 27 MET 27 308 ? ? ? A . n A 1 28 GLY 28 309 ? ? ? A . n A 1 29 ARG 29 310 ? ? ? A . n A 1 30 SER 30 311 ? ? ? A . n A 1 31 THR 31 312 ? ? ? A . n A 1 32 GLY 32 313 313 GLY GLY A . n A 1 33 ALA 33 314 314 ALA ALA A . n A 1 34 VAL 34 315 315 VAL VAL A . n A 1 35 ALA 35 316 316 ALA ALA A . n A 1 36 LEU 36 317 317 LEU LEU A . n A 1 37 PHE 37 318 318 PHE PHE A . n A 1 38 SER 38 319 319 SER SER A . n A 1 39 ALA 39 320 320 ALA ALA A . n A 1 40 ARG 40 321 321 ARG ARG A . n A 1 41 ALA 41 322 322 ALA ALA A . n A 1 42 ALA 42 323 ? ? ? A . n A 1 43 SER 43 324 ? ? ? A . n A 1 44 ASP 44 325 ? ? ? A . n A 1 45 ASP 45 326 ? ? ? A . n A 1 46 GLY 46 327 ? ? ? A . n A 1 47 PHE 47 328 ? ? ? A . n A 1 48 GLU 48 329 ? ? ? A . n A 1 49 VAL 49 330 330 VAL VAL A . n A 1 50 ASP 50 331 331 ASP ASP A . n A 1 51 ILE 51 332 332 ILE ILE A . n A 1 52 GLU 52 333 333 GLU GLU A . n A 1 53 VAL 53 334 334 VAL VAL A . n A 1 54 PHE 54 335 335 PHE PHE A . n A 1 55 THR 55 336 336 THR THR A . n A 1 56 THR 56 337 337 THR THR A . n A 1 57 ARG 57 338 338 ARG ARG A . n A 1 58 PRO 58 339 339 PRO PRO A . n A 1 59 ASP 59 340 340 ASP ASP A . n A 1 60 THR 60 341 341 THR THR A . n A 1 61 LEU 61 342 342 LEU LEU A . n A 1 62 PHE 62 343 343 PHE PHE A . n A 1 63 GLY 63 344 344 GLY GLY A . n A 1 64 ALA 64 345 345 ALA ALA A . n A 1 65 THR 65 346 346 THR THR A . n A 1 66 TYR 66 347 347 TYR TYR A . n A 1 67 LEU 67 348 348 LEU LEU A . n A 1 68 VAL 68 349 349 VAL VAL A . n A 1 69 LEU 69 350 350 LEU LEU A . n A 1 70 ALA 70 351 351 ALA ALA A . n A 1 71 PRO 71 352 352 PRO PRO A . n A 1 72 GLU 72 353 353 GLU GLU A . n A 1 73 HIS 73 354 354 HIS HIS A . n A 1 74 ASP 74 355 355 ASP ASP A . n A 1 75 LEU 75 356 356 LEU LEU A . n A 1 76 VAL 76 357 357 VAL VAL A . n A 1 77 ASP 77 358 358 ASP ASP A . n A 1 78 GLU 78 359 359 GLU GLU A . n A 1 79 LEU 79 360 360 LEU LEU A . n A 1 80 VAL 80 361 361 VAL VAL A . n A 1 81 ALA 81 362 362 ALA ALA A . n A 1 82 ALA 82 363 363 ALA ALA A . n A 1 83 SER 83 364 364 SER SER A . n A 1 84 TRP 84 365 365 TRP TRP A . n A 1 85 PRO 85 366 366 PRO PRO A . n A 1 86 ALA 86 367 367 ALA ALA A . n A 1 87 GLY 87 368 368 GLY GLY A . n A 1 88 VAL 88 369 369 VAL VAL A . n A 1 89 ASN 89 370 370 ASN ASN A . n A 1 90 PRO 90 371 371 PRO PRO A . n A 1 91 LEU 91 372 372 LEU LEU A . n A 1 92 TRP 92 373 373 TRP TRP A . n A 1 93 THR 93 374 374 THR THR A . n A 1 94 TYR 94 375 375 TYR TYR A . n A 1 95 GLY 95 376 376 GLY GLY A . n A 1 96 GLY 96 377 377 GLY GLY A . n A 1 97 GLY 97 378 378 GLY GLY A . n A 1 98 THR 98 379 379 THR THR A . n A 1 99 PRO 99 380 380 PRO PRO A . n A 1 100 GLY 100 381 381 GLY GLY A . n A 1 101 GLU 101 382 382 GLU GLU A . n A 1 102 ALA 102 383 383 ALA ALA A . n A 1 103 ILE 103 384 384 ILE ILE A . n A 1 104 ALA 104 385 385 ALA ALA A . n A 1 105 ALA 105 386 386 ALA ALA A . n A 1 106 TYR 106 387 387 TYR TYR A . n A 1 107 ARG 107 388 388 ARG ARG A . n A 1 108 ARG 108 389 389 ARG ARG A . n A 1 109 ALA 109 390 390 ALA ALA A . n A 1 110 ILE 110 391 391 ILE ILE A . n A 1 111 ALA 111 392 392 ALA ALA A . n A 1 112 ALA 112 393 393 ALA ALA A . n A 1 113 LYS 113 394 394 LYS LYS A . n A 1 114 SER 114 395 395 SER SER A . n A 1 115 ASP 115 396 396 ASP ASP A . n A 1 116 LEU 116 397 397 LEU LEU A . n A 1 117 GLU 117 398 398 GLU GLU A . n A 1 118 ARG 118 399 399 ARG ARG A . n A 1 119 GLN 119 400 400 GLN GLN A . n A 1 120 GLU 120 401 ? ? ? A . n A 1 121 SER 121 402 ? ? ? A . n A 1 122 ARG 122 403 ? ? ? A . n A 1 123 GLU 123 404 ? ? ? A . n A 1 124 LYS 124 405 405 LYS LYS A . n A 1 125 THR 125 406 406 THR THR A . n A 1 126 GLY 126 407 407 GLY GLY A . n A 1 127 VAL 127 408 408 VAL VAL A . n A 1 128 PHE 128 409 409 PHE PHE A . n A 1 129 LEU 129 410 410 LEU LEU A . n A 1 130 GLY 130 411 411 GLY GLY A . n A 1 131 SER 131 412 412 SER SER A . n A 1 132 TYR 132 413 413 TYR TYR A . n A 1 133 ALA 133 414 414 ALA ALA A . n A 1 134 ILE 134 415 415 ILE ILE A . n A 1 135 ASN 135 416 416 ASN ASN A . n A 1 136 PRO 136 417 417 PRO PRO A . n A 1 137 ALA 137 418 418 ALA ALA A . n A 1 138 ASN 138 419 419 ASN ASN A . n A 1 139 GLY 139 420 420 GLY GLY A . n A 1 140 GLU 140 421 421 GLU GLU A . n A 1 141 PRO 141 422 422 PRO PRO A . n A 1 142 VAL 142 423 423 VAL VAL A . n A 1 143 PRO 143 424 424 PRO PRO A . n A 1 144 ILE 144 425 425 ILE ILE A . n A 1 145 PHE 145 426 426 PHE PHE A . n A 1 146 ILE 146 427 427 ILE ILE A . n A 1 147 ALA 147 428 428 ALA ALA A . n A 1 148 ASP 148 429 429 ASP ASP A . n A 1 149 TYR 149 430 430 TYR TYR A . n A 1 150 VAL 150 431 431 VAL VAL A . n A 1 151 LEU 151 432 432 LEU LEU A . n A 1 152 ALA 152 433 433 ALA ALA A . n A 1 153 GLY 153 434 434 GLY GLY A . n A 1 154 TYR 154 435 435 TYR TYR A . n A 1 155 GLY 155 436 436 GLY GLY A . n A 1 156 THR 156 437 437 THR THR A . n A 1 157 GLY 157 438 438 GLY GLY A . n A 1 158 ALA 158 439 439 ALA ALA A . n A 1 159 ILE 159 440 440 ILE ILE A . n A 1 160 MET 160 441 441 MET MET A . n A 1 161 ALA 161 442 442 ALA ALA A . n A 1 162 VAL 162 443 443 VAL VAL A . n A 1 163 PRO 163 444 444 PRO PRO A . n A 1 164 GLY 164 445 445 GLY GLY A . n A 1 165 HIS 165 446 446 HIS HIS A . n A 1 166 ASP 166 447 447 ASP ASP A . n A 1 167 GLN 167 448 448 GLN GLN A . n A 1 168 ARG 168 449 449 ARG ARG A . n A 1 169 ASP 169 450 450 ASP ASP A . n A 1 170 TRP 170 451 451 TRP TRP A . n A 1 171 ASP 171 452 452 ASP ASP A . n A 1 172 PHE 172 453 453 PHE PHE A . n A 1 173 ALA 173 454 454 ALA ALA A . n A 1 174 ARG 174 455 455 ARG ARG A . n A 1 175 ALA 175 456 456 ALA ALA A . n A 1 176 PHE 176 457 457 PHE PHE A . n A 1 177 GLY 177 458 458 GLY GLY A . n A 1 178 LEU 178 459 459 LEU LEU A . n A 1 179 PRO 179 460 460 PRO PRO A . n A 1 180 ILE 180 461 461 ILE ILE A . n A 1 181 VAL 181 462 462 VAL VAL A . n A 1 182 GLU 182 463 463 GLU GLU A . n A 1 183 VAL 183 464 464 VAL VAL A . n A 1 184 ILE 184 465 465 ILE ILE A . n A 1 185 ALA 185 466 466 ALA ALA A . n A 1 186 GLY 186 467 467 GLY GLY A . n A 1 187 GLY 187 468 468 GLY GLY A . n A 1 188 ASN 188 469 469 ASN ASN A . n A 1 189 ILE 189 470 470 ILE ILE A . n A 1 190 SER 190 471 471 SER SER A . n A 1 191 GLU 191 472 472 GLU GLU A . n A 1 192 SER 192 473 473 SER SER A . n A 1 193 ALA 193 474 474 ALA ALA A . n A 1 194 TYR 194 475 475 TYR TYR A . n A 1 195 THR 195 476 476 THR THR A . n A 1 196 GLY 196 477 477 GLY GLY A . n A 1 197 ASP 197 478 478 ASP ASP A . n A 1 198 GLY 198 479 479 GLY GLY A . n A 1 199 ILE 199 480 480 ILE ILE A . n A 1 200 LEU 200 481 481 LEU LEU A . n A 1 201 VAL 201 482 482 VAL VAL A . n A 1 202 ASN 202 483 483 ASN ASN A . n A 1 203 SER 203 484 484 SER SER A . n A 1 204 ASP 204 485 485 ASP ASP A . n A 1 205 TYR 205 486 486 TYR TYR A . n A 1 206 LEU 206 487 487 LEU LEU A . n A 1 207 ASN 207 488 488 ASN ASN A . n A 1 208 GLY 208 489 489 GLY GLY A . n A 1 209 MET 209 490 490 MET MET A . n A 1 210 SER 210 491 491 SER SER A . n A 1 211 VAL 211 492 492 VAL VAL A . n A 1 212 PRO 212 493 493 PRO PRO A . n A 1 213 ALA 213 494 494 ALA ALA A . n A 1 214 ALA 214 495 495 ALA ALA A . n A 1 215 LYS 215 496 496 LYS LYS A . n A 1 216 ARG 216 497 497 ARG ARG A . n A 1 217 ALA 217 498 498 ALA ALA A . n A 1 218 ILE 218 499 499 ILE ILE A . n A 1 219 VAL 219 500 500 VAL VAL A . n A 1 220 ASP 220 501 501 ASP ASP A . n A 1 221 ARG 221 502 502 ARG ARG A . n A 1 222 LEU 222 503 503 LEU LEU A . n A 1 223 GLU 223 504 504 GLU GLU A . n A 1 224 SER 224 505 505 SER SER A . n A 1 225 ALA 225 506 506 ALA ALA A . n A 1 226 GLY 226 507 507 GLY GLY A . n A 1 227 ARG 227 508 508 ARG ARG A . n A 1 228 GLY 228 509 509 GLY GLY A . n A 1 229 ARG 229 510 510 ARG ARG A . n A 1 230 ALA 230 511 511 ALA ALA A . n A 1 231 ARG 231 512 512 ARG ARG A . n A 1 232 ILE 232 513 513 ILE ILE A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MET 1 1 1 MET MET A . C 3 LEU 1 2 2 LEU LEU A . D 4 A52 1 1514 1514 A52 A52 A . E 5 EDO 1 1515 1515 EDO EDO A . F 6 HOH 1 2001 2001 HOH HOH A . F 6 HOH 2 2002 2002 HOH HOH A . F 6 HOH 3 2003 2003 HOH HOH A . F 6 HOH 4 2004 2004 HOH HOH A . F 6 HOH 5 2005 2005 HOH HOH A . F 6 HOH 6 2006 2006 HOH HOH A . F 6 HOH 7 2007 2007 HOH HOH A . F 6 HOH 8 2008 2008 HOH HOH A . F 6 HOH 9 2009 2009 HOH HOH A . F 6 HOH 10 2010 2010 HOH HOH A . F 6 HOH 11 2011 2011 HOH HOH A . F 6 HOH 12 2012 2012 HOH HOH A . F 6 HOH 13 2013 2013 HOH HOH A . F 6 HOH 14 2014 2014 HOH HOH A . F 6 HOH 15 2015 2015 HOH HOH A . F 6 HOH 16 2016 2016 HOH HOH A . F 6 HOH 17 2017 2017 HOH HOH A . F 6 HOH 18 2018 2018 HOH HOH A . F 6 HOH 19 2019 2019 HOH HOH A . F 6 HOH 20 2020 2020 HOH HOH A . F 6 HOH 21 2021 2021 HOH HOH A . F 6 HOH 22 2022 2022 HOH HOH A . F 6 HOH 23 2023 2023 HOH HOH A . F 6 HOH 24 2024 2024 HOH HOH A . F 6 HOH 25 2025 2025 HOH HOH A . F 6 HOH 26 2026 2026 HOH HOH A . F 6 HOH 27 2027 2027 HOH HOH A . F 6 HOH 28 2028 2028 HOH HOH A . F 6 HOH 29 2029 2029 HOH HOH A . F 6 HOH 30 2030 2030 HOH HOH A . F 6 HOH 31 2031 2031 HOH HOH A . F 6 HOH 32 2032 2032 HOH HOH A . F 6 HOH 33 2033 2033 HOH HOH A . F 6 HOH 34 2034 2034 HOH HOH A . F 6 HOH 35 2035 2035 HOH HOH A . F 6 HOH 36 2036 2036 HOH HOH A . F 6 HOH 37 2037 2037 HOH HOH A . F 6 HOH 38 2038 2038 HOH HOH A . F 6 HOH 39 2039 2039 HOH HOH A . F 6 HOH 40 2040 2040 HOH HOH A . F 6 HOH 41 2041 2041 HOH HOH A . F 6 HOH 42 2042 2042 HOH HOH A . F 6 HOH 43 2043 2043 HOH HOH A . F 6 HOH 44 2044 2044 HOH HOH A . F 6 HOH 45 2045 2045 HOH HOH A . F 6 HOH 46 2046 2046 HOH HOH A . F 6 HOH 47 2047 2047 HOH HOH A . F 6 HOH 48 2048 2048 HOH HOH A . F 6 HOH 49 2049 2049 HOH HOH A . F 6 HOH 50 2050 2050 HOH HOH A . F 6 HOH 51 2051 2051 HOH HOH A . F 6 HOH 52 2052 2052 HOH HOH A . F 6 HOH 53 2053 2053 HOH HOH A . F 6 HOH 54 2054 2054 HOH HOH A . F 6 HOH 55 2055 2055 HOH HOH A . F 6 HOH 56 2056 2056 HOH HOH A . F 6 HOH 57 2057 2057 HOH HOH A . F 6 HOH 58 2058 2058 HOH HOH A . F 6 HOH 59 2059 2059 HOH HOH A . F 6 HOH 60 2060 2060 HOH HOH A . F 6 HOH 61 2061 2061 HOH HOH A . F 6 HOH 62 2062 2062 HOH HOH A . F 6 HOH 63 2063 2063 HOH HOH A . F 6 HOH 64 2064 2064 HOH HOH A . F 6 HOH 65 2065 2065 HOH HOH A . F 6 HOH 66 2066 2066 HOH HOH A . F 6 HOH 67 2067 2067 HOH HOH A . F 6 HOH 68 2068 2068 HOH HOH A . F 6 HOH 69 2069 2069 HOH HOH A . F 6 HOH 70 2070 2070 HOH HOH A . F 6 HOH 71 2071 2071 HOH HOH A . F 6 HOH 72 2072 2072 HOH HOH A . F 6 HOH 73 2073 2073 HOH HOH A . F 6 HOH 74 2074 2074 HOH HOH A . F 6 HOH 75 2075 2075 HOH HOH A . F 6 HOH 76 2076 2076 HOH HOH A . F 6 HOH 77 2077 2077 HOH HOH A . F 6 HOH 78 2078 2078 HOH HOH A . F 6 HOH 79 2079 2079 HOH HOH A . F 6 HOH 80 2080 2080 HOH HOH A . F 6 HOH 81 2081 2081 HOH HOH A . F 6 HOH 82 2082 2082 HOH HOH A . F 6 HOH 83 2083 2083 HOH HOH A . F 6 HOH 84 2084 2084 HOH HOH A . F 6 HOH 85 2085 2085 HOH HOH A . F 6 HOH 86 2086 2086 HOH HOH A . F 6 HOH 87 2087 2087 HOH HOH A . F 6 HOH 88 2088 2088 HOH HOH A . F 6 HOH 89 2089 2089 HOH HOH A . F 6 HOH 90 2090 2090 HOH HOH A . F 6 HOH 91 2091 2091 HOH HOH A . F 6 HOH 92 2092 2092 HOH HOH A . F 6 HOH 93 2093 2093 HOH HOH A . F 6 HOH 94 2094 2094 HOH HOH A . F 6 HOH 95 2095 2095 HOH HOH A . F 6 HOH 96 2096 2096 HOH HOH A . F 6 HOH 97 2097 2097 HOH HOH A . F 6 HOH 98 2098 2098 HOH HOH A . F 6 HOH 99 2099 2099 HOH HOH A . F 6 HOH 100 2100 2100 HOH HOH A . F 6 HOH 101 2101 2101 HOH HOH A . F 6 HOH 102 2102 2102 HOH HOH A . F 6 HOH 103 2103 2103 HOH HOH A . F 6 HOH 104 2104 2104 HOH HOH A . F 6 HOH 105 2105 2105 HOH HOH A . F 6 HOH 106 2106 2106 HOH HOH A . F 6 HOH 107 2107 2107 HOH HOH A . F 6 HOH 108 2108 2108 HOH HOH A . F 6 HOH 109 2109 2109 HOH HOH A . F 6 HOH 110 2110 2110 HOH HOH A . F 6 HOH 111 2111 2111 HOH HOH A . F 6 HOH 112 2112 2112 HOH HOH A . F 6 HOH 113 2113 2113 HOH HOH A . F 6 HOH 114 2114 2114 HOH HOH A . F 6 HOH 115 2115 2115 HOH HOH A . F 6 HOH 116 2116 2116 HOH HOH A . F 6 HOH 117 2117 2117 HOH HOH A . F 6 HOH 118 2118 2118 HOH HOH A . F 6 HOH 119 2119 2119 HOH HOH A . F 6 HOH 120 2120 2120 HOH HOH A . F 6 HOH 121 2121 2121 HOH HOH A . F 6 HOH 122 2122 2122 HOH HOH A . F 6 HOH 123 2123 2123 HOH HOH A . F 6 HOH 124 2124 2124 HOH HOH A . F 6 HOH 125 2125 2125 HOH HOH A . F 6 HOH 126 2126 2126 HOH HOH A . F 6 HOH 127 2127 2127 HOH HOH A . F 6 HOH 128 2128 2128 HOH HOH A . F 6 HOH 129 2129 2129 HOH HOH A . F 6 HOH 130 2130 2130 HOH HOH A . F 6 HOH 131 2131 2131 HOH HOH A . F 6 HOH 132 2132 2132 HOH HOH A . F 6 HOH 133 2133 2133 HOH HOH A . F 6 HOH 134 2134 2134 HOH HOH A . F 6 HOH 135 2135 2135 HOH HOH A . F 6 HOH 136 2136 2136 HOH HOH A . F 6 HOH 137 2137 2137 HOH HOH A . F 6 HOH 138 2138 2138 HOH HOH A . F 6 HOH 139 2139 2139 HOH HOH A . F 6 HOH 140 2140 2140 HOH HOH A . F 6 HOH 141 2141 2141 HOH HOH A . F 6 HOH 142 2142 2142 HOH HOH A . F 6 HOH 143 2143 2143 HOH HOH A . F 6 HOH 144 2144 2144 HOH HOH A . F 6 HOH 145 2145 2145 HOH HOH A . F 6 HOH 146 2146 2146 HOH HOH A . F 6 HOH 147 2147 2147 HOH HOH A . F 6 HOH 148 2148 2148 HOH HOH A . F 6 HOH 149 2149 2149 HOH HOH A . F 6 HOH 150 2150 2150 HOH HOH A . F 6 HOH 151 2151 2151 HOH HOH A . F 6 HOH 152 2152 2152 HOH HOH A . F 6 HOH 153 2153 2153 HOH HOH A . F 6 HOH 154 2154 2154 HOH HOH A . F 6 HOH 155 2155 2155 HOH HOH A . F 6 HOH 156 2156 2156 HOH HOH A . F 6 HOH 157 2157 2157 HOH HOH A . F 6 HOH 158 2158 2158 HOH HOH A . F 6 HOH 159 2159 2159 HOH HOH A . F 6 HOH 160 2160 2160 HOH HOH A . F 6 HOH 161 2161 2161 HOH HOH A . F 6 HOH 162 2162 2162 HOH HOH A . F 6 HOH 163 2163 2163 HOH HOH A . F 6 HOH 164 2164 2164 HOH HOH A . F 6 HOH 165 2165 2165 HOH HOH A . F 6 HOH 166 2166 2166 HOH HOH A . F 6 HOH 167 2167 2167 HOH HOH A . F 6 HOH 168 2168 2168 HOH HOH A . F 6 HOH 169 2169 2169 HOH HOH A . F 6 HOH 170 2170 2170 HOH HOH A . F 6 HOH 171 2171 2171 HOH HOH A . F 6 HOH 172 2172 2172 HOH HOH A . F 6 HOH 173 2173 2173 HOH HOH A . F 6 HOH 174 2174 2174 HOH HOH A . F 6 HOH 175 2175 2175 HOH HOH A . F 6 HOH 176 2176 2176 HOH HOH A . F 6 HOH 177 2177 2177 HOH HOH A . F 6 HOH 178 2178 2178 HOH HOH A . F 6 HOH 179 2179 2179 HOH HOH A . F 6 HOH 180 2180 2180 HOH HOH A . F 6 HOH 181 2181 2181 HOH HOH A . F 6 HOH 182 2182 2182 HOH HOH A . F 6 HOH 183 2183 2183 HOH HOH A . F 6 HOH 184 2184 2184 HOH HOH A . F 6 HOH 185 2185 2185 HOH HOH A . F 6 HOH 186 2186 2186 HOH HOH A . F 6 HOH 187 2187 2187 HOH HOH A . F 6 HOH 188 2188 2188 HOH HOH A . F 6 HOH 189 2189 2189 HOH HOH A . F 6 HOH 190 2190 2190 HOH HOH A . F 6 HOH 191 2191 2191 HOH HOH A . F 6 HOH 192 2192 2192 HOH HOH A . F 6 HOH 193 2193 2193 HOH HOH A . F 6 HOH 194 2194 2194 HOH HOH A . F 6 HOH 195 2195 2195 HOH HOH A . F 6 HOH 196 2196 2196 HOH HOH A . F 6 HOH 197 2197 2197 HOH HOH A . F 6 HOH 198 2198 2198 HOH HOH A . F 6 HOH 199 2199 2199 HOH HOH A . F 6 HOH 200 2200 2200 HOH HOH A . F 6 HOH 201 2201 2201 HOH HOH A . F 6 HOH 202 2202 2202 HOH HOH A . F 6 HOH 203 2203 2203 HOH HOH A . F 6 HOH 204 2204 2204 HOH HOH A . F 6 HOH 205 2205 2205 HOH HOH A . F 6 HOH 206 2206 2206 HOH HOH A . F 6 HOH 207 2207 2207 HOH HOH A . F 6 HOH 208 2208 2208 HOH HOH A . F 6 HOH 209 2209 2209 HOH HOH A . F 6 HOH 210 2210 2210 HOH HOH A . F 6 HOH 211 2211 2211 HOH HOH A . F 6 HOH 212 2212 2212 HOH HOH A . F 6 HOH 213 2213 2213 HOH HOH A . F 6 HOH 214 2214 2214 HOH HOH A . F 6 HOH 215 2215 2215 HOH HOH A . F 6 HOH 216 2216 2216 HOH HOH A . F 6 HOH 217 2217 2217 HOH HOH A . F 6 HOH 218 2218 2218 HOH HOH A . F 6 HOH 219 2219 2219 HOH HOH A . F 6 HOH 220 2220 2220 HOH HOH A . F 6 HOH 221 2221 2221 HOH HOH A . F 6 HOH 222 2222 2222 HOH HOH A . F 6 HOH 223 2223 2223 HOH HOH A . F 6 HOH 224 2224 2224 HOH HOH A . F 6 HOH 225 2225 2225 HOH HOH A . F 6 HOH 226 2226 2226 HOH HOH A . F 6 HOH 227 2227 2227 HOH HOH A . F 6 HOH 228 2228 2228 HOH HOH A . F 6 HOH 229 2229 2229 HOH HOH A . F 6 HOH 230 2230 2230 HOH HOH A . F 6 HOH 231 2231 2231 HOH HOH A . F 6 HOH 232 2232 2232 HOH HOH A . F 6 HOH 233 2233 2233 HOH HOH A . F 6 HOH 234 2234 2234 HOH HOH A . F 6 HOH 235 2235 2235 HOH HOH A . F 6 HOH 236 2236 2236 HOH HOH A . F 6 HOH 237 2237 2237 HOH HOH A . F 6 HOH 238 2238 2238 HOH HOH A . F 6 HOH 239 2239 2239 HOH HOH A . F 6 HOH 240 2240 2240 HOH HOH A . F 6 HOH 241 2241 2241 HOH HOH A . F 6 HOH 242 2242 2242 HOH HOH A . F 6 HOH 243 2243 2243 HOH HOH A . F 6 HOH 244 2244 2244 HOH HOH A . F 6 HOH 245 2245 2245 HOH HOH A . F 6 HOH 246 2246 2246 HOH HOH A . F 6 HOH 247 2247 2247 HOH HOH A . F 6 HOH 248 2248 2248 HOH HOH A . F 6 HOH 249 2249 2249 HOH HOH A . F 6 HOH 250 2250 2250 HOH HOH A . F 6 HOH 251 2251 2251 HOH HOH A . F 6 HOH 252 2252 2252 HOH HOH A . F 6 HOH 253 2253 2253 HOH HOH A . F 6 HOH 254 2254 2254 HOH HOH A . F 6 HOH 255 2255 2255 HOH HOH A . F 6 HOH 256 2256 2256 HOH HOH A . F 6 HOH 257 2257 2257 HOH HOH A . F 6 HOH 258 2258 2258 HOH HOH A . F 6 HOH 259 2259 2259 HOH HOH A . F 6 HOH 260 2260 2260 HOH HOH A . F 6 HOH 261 2261 2261 HOH HOH A . F 6 HOH 262 2262 2262 HOH HOH A . F 6 HOH 263 2263 2263 HOH HOH A . F 6 HOH 264 2264 2264 HOH HOH A . F 6 HOH 265 2265 2265 HOH HOH A . F 6 HOH 266 2266 2266 HOH HOH A . F 6 HOH 267 2267 2267 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 N 1 A MET 1 ? OXT ? B MET 1 OXT 2 1 N 1 A LEU 2 ? OXT ? C LEU 1 OXT # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.5.0102 ? 1 XDS 'data reduction' . ? 2 XSCALE 'data scaling' . ? 3 PHASER phasing . ? 4 # _cell.entry_id 5AGR _cell.length_a 44.330 _cell.length_b 61.850 _cell.length_c 77.080 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5AGR _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # _exptl.entry_id 5AGR _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.1 _exptl_crystal.density_percent_sol 42.1 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.1 M BIS-TRIS PH 5.5, 17% W/V PEG 10000, 0.2 M AMMONIUM ACETATE' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date 2010-07-03 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.87260 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID23-2' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID23-2 _diffrn_source.pdbx_wavelength 0.87260 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 5AGR _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 35.50 _reflns.d_resolution_high 1.30 _reflns.number_obs 48494 _reflns.number_all ? _reflns.percent_possible_obs 96.8 _reflns.pdbx_Rmerge_I_obs 0.05 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 14.40 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4.3 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.30 _reflns_shell.d_res_low 1.33 _reflns_shell.percent_possible_all 98.9 _reflns_shell.Rmerge_I_obs 0.98 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 1.90 _reflns_shell.pdbx_redundancy 4.0 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 5AGR _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 48494 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 38.54 _refine.ls_d_res_high 1.30 _refine.ls_percent_reflns_obs 96.76 _refine.ls_R_factor_obs 0.17059 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.16915 _refine.ls_R_factor_R_free 0.19657 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.2 _refine.ls_number_reflns_R_free 2668 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.968 _refine.correlation_coeff_Fo_to_Fc_free 0.965 _refine.B_iso_mean 18.222 _refine.aniso_B[1][1] 0.54 _refine.aniso_B[2][2] 0.16 _refine.aniso_B[3][3] -0.70 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. VALUES REFINED INDIVIDUALLY' _refine.pdbx_starting_model 'PDB ENTRY 2AJG' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.054 _refine.pdbx_overall_ESU_R_Free 0.051 _refine.overall_SU_ML 0.032 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 1.673 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1414 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 57 _refine_hist.number_atoms_solvent 267 _refine_hist.number_atoms_total 1738 _refine_hist.d_res_high 1.30 _refine_hist.d_res_low 38.54 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.008 0.022 ? 1591 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.511 1.994 ? 2187 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.716 5.000 ? 211 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 28.860 22.286 ? 70 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 13.351 15.000 ? 229 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 10.337 15.000 ? 17 'X-RAY DIFFRACTION' ? r_chiral_restr 0.147 0.200 ? 241 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.006 0.021 ? 1244 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.845 1.500 ? 987 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.475 2.000 ? 1578 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 2.104 3.000 ? 604 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 3.203 4.500 ? 597 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 0.940 3.000 ? 1591 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.300 _refine_ls_shell.d_res_low 1.334 _refine_ls_shell.number_reflns_R_work 3603 _refine_ls_shell.R_factor_R_work 0.239 _refine_ls_shell.percent_reflns_obs 98.94 _refine_ls_shell.R_factor_R_free 0.279 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 213 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _database_PDB_matrix.entry_id 5AGR _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 5AGR _struct.title ;Crystal structure of the LeuRS editing domain of Mycobacterium tuberculosis in complex with the adduct (S)-3-(Aminomethyl)-7-ethoxybenzo[c][1,2]oxaborol-1(3H)-ol-AMP ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 5AGR _struct_keywords.pdbx_keywords LIGASE _struct_keywords.text ;LIGASE, ATP + L-LEUCINE + TRNA(LEU) GIVES AMP + DIPHOSPHATE + L-LEUCYL- TRNA(LEU) AMINOACYL-TRNA EDITING ACTIVITY, AMINOACYL-TRNA SYNTHETASE, PROTEIN BIOSYNTHESIS, NOVEL BORON INHIBITORS OF LEURS ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code SYL_MYCTU _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession P9WFV1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5AGR _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 28 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 232 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P9WFV1 _struct_ref_seq.db_align_beg 309 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 513 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 309 _struct_ref_seq.pdbx_auth_seq_align_end 513 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5AGR MET A 1 ? UNP P9WFV1 ? ? 'expression tag' 282 1 1 5AGR LYS A 2 ? UNP P9WFV1 ? ? 'expression tag' 283 2 1 5AGR HIS A 3 ? UNP P9WFV1 ? ? 'expression tag' 284 3 1 5AGR HIS A 4 ? UNP P9WFV1 ? ? 'expression tag' 285 4 1 5AGR HIS A 5 ? UNP P9WFV1 ? ? 'expression tag' 286 5 1 5AGR HIS A 6 ? UNP P9WFV1 ? ? 'expression tag' 287 6 1 5AGR HIS A 7 ? UNP P9WFV1 ? ? 'expression tag' 288 7 1 5AGR HIS A 8 ? UNP P9WFV1 ? ? 'expression tag' 289 8 1 5AGR PRO A 9 ? UNP P9WFV1 ? ? 'expression tag' 290 9 1 5AGR MET A 10 ? UNP P9WFV1 ? ? 'expression tag' 291 10 1 5AGR SER A 11 ? UNP P9WFV1 ? ? 'expression tag' 292 11 1 5AGR ASP A 12 ? UNP P9WFV1 ? ? 'expression tag' 293 12 1 5AGR TYR A 13 ? UNP P9WFV1 ? ? 'expression tag' 294 13 1 5AGR ASP A 14 ? UNP P9WFV1 ? ? 'expression tag' 295 14 1 5AGR ILE A 15 ? UNP P9WFV1 ? ? 'expression tag' 296 15 1 5AGR PRO A 16 ? UNP P9WFV1 ? ? 'expression tag' 297 16 1 5AGR THR A 17 ? UNP P9WFV1 ? ? 'expression tag' 298 17 1 5AGR THR A 18 ? UNP P9WFV1 ? ? 'expression tag' 299 18 1 5AGR GLU A 19 ? UNP P9WFV1 ? ? 'expression tag' 300 19 1 5AGR ASN A 20 ? UNP P9WFV1 ? ? 'expression tag' 301 20 1 5AGR LEU A 21 ? UNP P9WFV1 ? ? 'expression tag' 302 21 1 5AGR TYR A 22 ? UNP P9WFV1 ? ? 'expression tag' 303 22 1 5AGR PHE A 23 ? UNP P9WFV1 ? ? 'expression tag' 304 23 1 5AGR GLN A 24 ? UNP P9WFV1 ? ? 'expression tag' 305 24 1 5AGR GLY A 25 ? UNP P9WFV1 ? ? 'expression tag' 306 25 1 5AGR ALA A 26 ? UNP P9WFV1 ? ? 'expression tag' 307 26 1 5AGR MET A 27 ? UNP P9WFV1 ? ? 'expression tag' 308 27 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ARG A 57 ? ALA A 64 ? ARG A 338 ALA A 345 5 ? 8 HELX_P HELX_P2 2 LEU A 75 ? VAL A 80 ? LEU A 356 VAL A 361 1 ? 6 HELX_P HELX_P3 3 ASN A 89 ? THR A 93 ? ASN A 370 THR A 374 5 ? 5 HELX_P HELX_P4 4 THR A 98 ? ALA A 111 ? THR A 379 ALA A 392 1 ? 14 HELX_P HELX_P5 5 SER A 114 ? GLN A 119 ? SER A 395 GLN A 400 1 ? 6 HELX_P HELX_P6 6 ASP A 166 ? GLY A 177 ? ASP A 447 GLY A 458 1 ? 12 HELX_P HELX_P7 7 SER A 203 ? ASN A 207 ? SER A 484 ASN A 488 5 ? 5 HELX_P HELX_P8 8 SER A 210 ? ALA A 225 ? SER A 491 ALA A 506 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 2 ? AB ? 6 ? AC ? 6 ? AD ? 2 ? AE ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AB 1 2 ? anti-parallel AB 2 3 ? parallel AB 3 4 ? anti-parallel AB 4 5 ? anti-parallel AB 5 6 ? anti-parallel AC 1 2 ? anti-parallel AC 2 3 ? parallel AC 3 4 ? anti-parallel AC 4 5 ? anti-parallel AC 5 6 ? anti-parallel AD 1 2 ? anti-parallel AE 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 ASP A 50 ? THR A 55 ? ASP A 331 THR A 336 AA 2 ALA A 33 ? ALA A 39 ? ALA A 314 ALA A 320 AB 1 ALA A 158 ? ALA A 161 ? ALA A 439 ALA A 442 AB 2 TYR A 66 ? LEU A 69 ? TYR A 347 LEU A 350 AB 3 PRO A 141 ? ILE A 146 ? PRO A 422 ILE A 427 AB 4 VAL A 127 ? ILE A 134 ? VAL A 408 ILE A 415 AB 5 ALA A 33 ? ALA A 39 ? ALA A 314 ALA A 320 AB 6 GLY A 228 ? ALA A 230 ? GLY A 509 ALA A 511 AC 1 ALA A 158 ? ALA A 161 ? ALA A 439 ALA A 442 AC 2 TYR A 66 ? LEU A 69 ? TYR A 347 LEU A 350 AC 3 PRO A 141 ? ILE A 146 ? PRO A 422 ILE A 427 AC 4 VAL A 127 ? ILE A 134 ? VAL A 408 ILE A 415 AC 5 ALA A 33 ? ALA A 39 ? ALA A 314 ALA A 320 AC 6 ASP A 50 ? THR A 55 ? ASP A 331 THR A 336 AD 1 GLY A 228 ? ALA A 230 ? GLY A 509 ALA A 511 AD 2 ALA A 33 ? ALA A 39 ? ALA A 314 ALA A 320 AE 1 ILE A 184 ? ALA A 185 ? ILE A 465 ALA A 466 AE 2 ILE A 199 ? LEU A 200 ? ILE A 480 LEU A 481 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N THR A 55 ? N THR A 336 O ALA A 33 ? O ALA A 314 AB 1 2 N ALA A 161 ? N ALA A 442 O TYR A 66 ? O TYR A 347 AB 2 3 N LEU A 67 ? N LEU A 348 O PRO A 143 ? O PRO A 424 AB 3 4 N ILE A 146 ? N ILE A 427 O VAL A 127 ? O VAL A 408 AB 4 5 N ILE A 134 ? N ILE A 415 O SER A 38 ? O SER A 319 AB 5 6 N VAL A 34 ? N VAL A 315 O ARG A 229 ? O ARG A 510 AC 1 2 N ALA A 161 ? N ALA A 442 O TYR A 66 ? O TYR A 347 AC 2 3 N LEU A 67 ? N LEU A 348 O PRO A 143 ? O PRO A 424 AC 3 4 N ILE A 146 ? N ILE A 427 O VAL A 127 ? O VAL A 408 AC 4 5 N ILE A 134 ? N ILE A 415 O SER A 38 ? O SER A 319 AC 5 6 N PHE A 37 ? N PHE A 318 O ILE A 51 ? O ILE A 332 AD 1 2 N ARG A 229 ? N ARG A 510 O VAL A 34 ? O VAL A 315 AE 1 2 N ALA A 185 ? N ALA A 466 O ILE A 199 ? O ILE A 480 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A A52 1514 ? 18 'BINDING SITE FOR RESIDUE A52 A 1514' AC2 Software A EDO 1515 ? 6 'BINDING SITE FOR RESIDUE EDO A 1515' AC3 Software ? ? ? ? 9 'Binding site for Di-peptide MET A 1 and LEU A 2' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 18 PHE A 54 ? PHE A 335 . ? 1_555 ? 2 AC1 18 THR A 55 ? THR A 336 . ? 1_555 ? 3 AC1 18 THR A 56 ? THR A 337 . ? 1_555 ? 4 AC1 18 ARG A 57 ? ARG A 338 . ? 1_555 ? 5 AC1 18 TYR A 149 ? TYR A 430 . ? 1_555 ? 6 AC1 18 VAL A 150 ? VAL A 431 . ? 1_555 ? 7 AC1 18 LEU A 151 ? LEU A 432 . ? 1_555 ? 8 AC1 18 TYR A 154 ? TYR A 435 . ? 1_555 ? 9 AC1 18 ILE A 159 ? ILE A 440 . ? 1_555 ? 10 AC1 18 MET A 160 ? MET A 441 . ? 1_555 ? 11 AC1 18 HIS A 165 ? HIS A 446 . ? 1_555 ? 12 AC1 18 ASP A 166 ? ASP A 447 . ? 1_555 ? 13 AC1 18 ARG A 168 ? ARG A 449 . ? 1_555 ? 14 AC1 18 ASP A 169 ? ASP A 450 . ? 1_555 ? 15 AC1 18 HOH F . ? HOH A 2015 . ? 1_555 ? 16 AC1 18 HOH F . ? HOH A 2114 . ? 1_555 ? 17 AC1 18 HOH F . ? HOH A 2137 . ? 1_555 ? 18 AC1 18 HOH F . ? HOH A 2138 . ? 1_555 ? 19 AC2 6 ASP A 50 ? ASP A 331 . ? 1_555 ? 20 AC2 6 ILE A 51 ? ILE A 332 . ? 1_555 ? 21 AC2 6 GLU A 52 ? GLU A 333 . ? 1_555 ? 22 AC2 6 HIS A 73 ? HIS A 354 . ? 1_555 ? 23 AC2 6 GLN A 119 ? GLN A 400 . ? 3_655 ? 24 AC2 6 THR A 156 ? THR A 437 . ? 1_555 ? 25 AC3 9 SER A 38 ? SER A 319 . ? 4_555 ? 26 AC3 9 ILE A 134 ? ILE A 415 . ? 4_555 ? 27 AC3 9 PRO A 136 ? PRO A 417 . ? 4_555 ? 28 AC3 9 GLY A 139 ? GLY A 420 . ? 4_555 ? 29 AC3 9 ARG A 221 ? ARG A 502 . ? 4_555 ? 30 AC3 9 ALA A 225 ? ALA A 506 . ? 4_555 ? 31 AC3 9 HOH F . ? HOH A 2006 . ? 4_555 ? 32 AC3 9 HOH F . ? HOH A 2237 . ? 4_555 ? 33 AC3 9 HOH F . ? HOH A 2238 . ? 4_555 ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 C _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 MET _pdbx_validate_close_contact.auth_seq_id_1 1 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 N _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 LEU _pdbx_validate_close_contact.auth_seq_id_2 2 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.33 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASP _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 485 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 49.45 _pdbx_validate_torsion.psi -116.54 # _pdbx_entry_details.entry_id 5AGR _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;CONTAINS A N-TERM SEQUENCE BELONGING TO PETM-11 EMBL VECTOR ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? A HOH 2001 ? . 5.88 2 1 O ? A HOH 2193 ? 7.47 . 3 1 O ? A HOH 2198 ? 7.02 . 4 1 O ? A HOH 2251 ? 6.57 . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 282 ? A MET 1 2 1 Y 1 A LYS 283 ? A LYS 2 3 1 Y 1 A HIS 284 ? A HIS 3 4 1 Y 1 A HIS 285 ? A HIS 4 5 1 Y 1 A HIS 286 ? A HIS 5 6 1 Y 1 A HIS 287 ? A HIS 6 7 1 Y 1 A HIS 288 ? A HIS 7 8 1 Y 1 A HIS 289 ? A HIS 8 9 1 Y 1 A PRO 290 ? A PRO 9 10 1 Y 1 A MET 291 ? A MET 10 11 1 Y 1 A SER 292 ? A SER 11 12 1 Y 1 A ASP 293 ? A ASP 12 13 1 Y 1 A TYR 294 ? A TYR 13 14 1 Y 1 A ASP 295 ? A ASP 14 15 1 Y 1 A ILE 296 ? A ILE 15 16 1 Y 1 A PRO 297 ? A PRO 16 17 1 Y 1 A THR 298 ? A THR 17 18 1 Y 1 A THR 299 ? A THR 18 19 1 Y 1 A GLU 300 ? A GLU 19 20 1 Y 1 A ASN 301 ? A ASN 20 21 1 Y 1 A LEU 302 ? A LEU 21 22 1 Y 1 A TYR 303 ? A TYR 22 23 1 Y 1 A PHE 304 ? A PHE 23 24 1 Y 1 A GLN 305 ? A GLN 24 25 1 Y 1 A GLY 306 ? A GLY 25 26 1 Y 1 A ALA 307 ? A ALA 26 27 1 Y 1 A MET 308 ? A MET 27 28 1 Y 1 A GLY 309 ? A GLY 28 29 1 Y 1 A ARG 310 ? A ARG 29 30 1 Y 1 A SER 311 ? A SER 30 31 1 Y 1 A THR 312 ? A THR 31 32 1 Y 1 A ALA 323 ? A ALA 42 33 1 Y 1 A SER 324 ? A SER 43 34 1 Y 1 A ASP 325 ? A ASP 44 35 1 Y 1 A ASP 326 ? A ASP 45 36 1 Y 1 A GLY 327 ? A GLY 46 37 1 Y 1 A PHE 328 ? A PHE 47 38 1 Y 1 A GLU 329 ? A GLU 48 39 1 Y 1 A GLU 401 ? A GLU 120 40 1 Y 1 A SER 402 ? A SER 121 41 1 Y 1 A ARG 403 ? A ARG 122 42 1 Y 1 A GLU 404 ? A GLU 123 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A52 B B N N 1 A52 P P N N 2 A52 N1 N Y N 3 A52 O1 O N N 4 A52 C2 C Y N 5 A52 N3 N Y N 6 A52 C4 C Y N 7 A52 C5 C Y N 8 A52 C6 C Y N 9 A52 N6 N N N 10 A52 N7 N Y N 11 A52 C8 C Y N 12 A52 N9 N Y N 13 A52 "C1'" C N R 14 A52 C10 C N S 15 A52 C11 C Y N 16 A52 C12 C Y N 17 A52 C13 C Y N 18 A52 C14 C Y N 19 A52 C15 C Y N 20 A52 C16 C Y N 21 A52 O1P O N N 22 A52 "C2'" C N R 23 A52 "O2'" O N N 24 A52 O2P O N N 25 A52 "C3'" C N S 26 A52 "O3'" O N N 27 A52 C33 C N N 28 A52 N34 N N N 29 A52 O35 O N N 30 A52 C36 C N N 31 A52 C37 C N N 32 A52 O3P O N N 33 A52 "C4'" C N R 34 A52 "O4'" O N N 35 A52 "C5'" C N N 36 A52 "O5'" O N N 37 A52 H2 H N N 38 A52 HN6 H N N 39 A52 HN6A H N N 40 A52 H8 H N N 41 A52 "H1'" H N N 42 A52 H10 H N N 43 A52 H13 H N N 44 A52 H14 H N N 45 A52 H15 H N N 46 A52 "H2'" H N N 47 A52 "H3'" H N N 48 A52 H33 H N N 49 A52 H33A H N N 50 A52 HN34 H N N 51 A52 HN3A H N N 52 A52 H36 H N N 53 A52 H36A H N N 54 A52 H37 H N N 55 A52 H37A H N N 56 A52 H37B H N N 57 A52 "H4'" H N N 58 A52 "H5'" H N N 59 A52 "H5'A" H N N 60 ALA N N N N 61 ALA CA C N S 62 ALA C C N N 63 ALA O O N N 64 ALA CB C N N 65 ALA OXT O N N 66 ALA H H N N 67 ALA H2 H N N 68 ALA HA H N N 69 ALA HB1 H N N 70 ALA HB2 H N N 71 ALA HB3 H N N 72 ALA HXT H N N 73 ARG N N N N 74 ARG CA C N S 75 ARG C C N N 76 ARG O O N N 77 ARG CB C N N 78 ARG CG C N N 79 ARG CD C N N 80 ARG NE N N N 81 ARG CZ C N N 82 ARG NH1 N N N 83 ARG NH2 N N N 84 ARG OXT O N N 85 ARG H H N N 86 ARG H2 H N N 87 ARG HA H N N 88 ARG HB2 H N N 89 ARG HB3 H N N 90 ARG HG2 H N N 91 ARG HG3 H N N 92 ARG HD2 H N N 93 ARG HD3 H N N 94 ARG HE H N N 95 ARG HH11 H N N 96 ARG HH12 H N N 97 ARG HH21 H N N 98 ARG HH22 H N N 99 ARG HXT H N N 100 ASN N N N N 101 ASN CA C N S 102 ASN C C N N 103 ASN O O N N 104 ASN CB C N N 105 ASN CG C N N 106 ASN OD1 O N N 107 ASN ND2 N N N 108 ASN OXT O N N 109 ASN H H N N 110 ASN H2 H N N 111 ASN HA H N N 112 ASN HB2 H N N 113 ASN HB3 H N N 114 ASN HD21 H N N 115 ASN HD22 H N N 116 ASN HXT H N N 117 ASP N N N N 118 ASP CA C N S 119 ASP C C N N 120 ASP O O N N 121 ASP CB C N N 122 ASP CG C N N 123 ASP OD1 O N N 124 ASP OD2 O N N 125 ASP OXT O N N 126 ASP H H N N 127 ASP H2 H N N 128 ASP HA H N N 129 ASP HB2 H N N 130 ASP HB3 H N N 131 ASP HD2 H N N 132 ASP HXT H N N 133 EDO C1 C N N 134 EDO O1 O N N 135 EDO C2 C N N 136 EDO O2 O N N 137 EDO H11 H N N 138 EDO H12 H N N 139 EDO HO1 H N N 140 EDO H21 H N N 141 EDO H22 H N N 142 EDO HO2 H N N 143 GLN N N N N 144 GLN CA C N S 145 GLN C C N N 146 GLN O O N N 147 GLN CB C N N 148 GLN CG C N N 149 GLN CD C N N 150 GLN OE1 O N N 151 GLN NE2 N N N 152 GLN OXT O N N 153 GLN H H N N 154 GLN H2 H N N 155 GLN HA H N N 156 GLN HB2 H N N 157 GLN HB3 H N N 158 GLN HG2 H N N 159 GLN HG3 H N N 160 GLN HE21 H N N 161 GLN HE22 H N N 162 GLN HXT H N N 163 GLU N N N N 164 GLU CA C N S 165 GLU C C N N 166 GLU O O N N 167 GLU CB C N N 168 GLU CG C N N 169 GLU CD C N N 170 GLU OE1 O N N 171 GLU OE2 O N N 172 GLU OXT O N N 173 GLU H H N N 174 GLU H2 H N N 175 GLU HA H N N 176 GLU HB2 H N N 177 GLU HB3 H N N 178 GLU HG2 H N N 179 GLU HG3 H N N 180 GLU HE2 H N N 181 GLU HXT H N N 182 GLY N N N N 183 GLY CA C N N 184 GLY C C N N 185 GLY O O N N 186 GLY OXT O N N 187 GLY H H N N 188 GLY H2 H N N 189 GLY HA2 H N N 190 GLY HA3 H N N 191 GLY HXT H N N 192 HIS N N N N 193 HIS CA C N S 194 HIS C C N N 195 HIS O O N N 196 HIS CB C N N 197 HIS CG C Y N 198 HIS ND1 N Y N 199 HIS CD2 C Y N 200 HIS CE1 C Y N 201 HIS NE2 N Y N 202 HIS OXT O N N 203 HIS H H N N 204 HIS H2 H N N 205 HIS HA H N N 206 HIS HB2 H N N 207 HIS HB3 H N N 208 HIS HD1 H N N 209 HIS HD2 H N N 210 HIS HE1 H N N 211 HIS HE2 H N N 212 HIS HXT H N N 213 HOH O O N N 214 HOH H1 H N N 215 HOH H2 H N N 216 ILE N N N N 217 ILE CA C N S 218 ILE C C N N 219 ILE O O N N 220 ILE CB C N S 221 ILE CG1 C N N 222 ILE CG2 C N N 223 ILE CD1 C N N 224 ILE OXT O N N 225 ILE H H N N 226 ILE H2 H N N 227 ILE HA H N N 228 ILE HB H N N 229 ILE HG12 H N N 230 ILE HG13 H N N 231 ILE HG21 H N N 232 ILE HG22 H N N 233 ILE HG23 H N N 234 ILE HD11 H N N 235 ILE HD12 H N N 236 ILE HD13 H N N 237 ILE HXT H N N 238 LEU N N N N 239 LEU CA C N S 240 LEU C C N N 241 LEU O O N N 242 LEU CB C N N 243 LEU CG C N N 244 LEU CD1 C N N 245 LEU CD2 C N N 246 LEU OXT O N N 247 LEU H H N N 248 LEU H2 H N N 249 LEU HA H N N 250 LEU HB2 H N N 251 LEU HB3 H N N 252 LEU HG H N N 253 LEU HD11 H N N 254 LEU HD12 H N N 255 LEU HD13 H N N 256 LEU HD21 H N N 257 LEU HD22 H N N 258 LEU HD23 H N N 259 LEU HXT H N N 260 LYS N N N N 261 LYS CA C N S 262 LYS C C N N 263 LYS O O N N 264 LYS CB C N N 265 LYS CG C N N 266 LYS CD C N N 267 LYS CE C N N 268 LYS NZ N N N 269 LYS OXT O N N 270 LYS H H N N 271 LYS H2 H N N 272 LYS HA H N N 273 LYS HB2 H N N 274 LYS HB3 H N N 275 LYS HG2 H N N 276 LYS HG3 H N N 277 LYS HD2 H N N 278 LYS HD3 H N N 279 LYS HE2 H N N 280 LYS HE3 H N N 281 LYS HZ1 H N N 282 LYS HZ2 H N N 283 LYS HZ3 H N N 284 LYS HXT H N N 285 MET N N N N 286 MET CA C N S 287 MET C C N N 288 MET O O N N 289 MET CB C N N 290 MET CG C N N 291 MET SD S N N 292 MET CE C N N 293 MET OXT O N N 294 MET H H N N 295 MET H2 H N N 296 MET HA H N N 297 MET HB2 H N N 298 MET HB3 H N N 299 MET HG2 H N N 300 MET HG3 H N N 301 MET HE1 H N N 302 MET HE2 H N N 303 MET HE3 H N N 304 MET HXT H N N 305 PHE N N N N 306 PHE CA C N S 307 PHE C C N N 308 PHE O O N N 309 PHE CB C N N 310 PHE CG C Y N 311 PHE CD1 C Y N 312 PHE CD2 C Y N 313 PHE CE1 C Y N 314 PHE CE2 C Y N 315 PHE CZ C Y N 316 PHE OXT O N N 317 PHE H H N N 318 PHE H2 H N N 319 PHE HA H N N 320 PHE HB2 H N N 321 PHE HB3 H N N 322 PHE HD1 H N N 323 PHE HD2 H N N 324 PHE HE1 H N N 325 PHE HE2 H N N 326 PHE HZ H N N 327 PHE HXT H N N 328 PRO N N N N 329 PRO CA C N S 330 PRO C C N N 331 PRO O O N N 332 PRO CB C N N 333 PRO CG C N N 334 PRO CD C N N 335 PRO OXT O N N 336 PRO H H N N 337 PRO HA H N N 338 PRO HB2 H N N 339 PRO HB3 H N N 340 PRO HG2 H N N 341 PRO HG3 H N N 342 PRO HD2 H N N 343 PRO HD3 H N N 344 PRO HXT H N N 345 SER N N N N 346 SER CA C N S 347 SER C C N N 348 SER O O N N 349 SER CB C N N 350 SER OG O N N 351 SER OXT O N N 352 SER H H N N 353 SER H2 H N N 354 SER HA H N N 355 SER HB2 H N N 356 SER HB3 H N N 357 SER HG H N N 358 SER HXT H N N 359 THR N N N N 360 THR CA C N S 361 THR C C N N 362 THR O O N N 363 THR CB C N R 364 THR OG1 O N N 365 THR CG2 C N N 366 THR OXT O N N 367 THR H H N N 368 THR H2 H N N 369 THR HA H N N 370 THR HB H N N 371 THR HG1 H N N 372 THR HG21 H N N 373 THR HG22 H N N 374 THR HG23 H N N 375 THR HXT H N N 376 TRP N N N N 377 TRP CA C N S 378 TRP C C N N 379 TRP O O N N 380 TRP CB C N N 381 TRP CG C Y N 382 TRP CD1 C Y N 383 TRP CD2 C Y N 384 TRP NE1 N Y N 385 TRP CE2 C Y N 386 TRP CE3 C Y N 387 TRP CZ2 C Y N 388 TRP CZ3 C Y N 389 TRP CH2 C Y N 390 TRP OXT O N N 391 TRP H H N N 392 TRP H2 H N N 393 TRP HA H N N 394 TRP HB2 H N N 395 TRP HB3 H N N 396 TRP HD1 H N N 397 TRP HE1 H N N 398 TRP HE3 H N N 399 TRP HZ2 H N N 400 TRP HZ3 H N N 401 TRP HH2 H N N 402 TRP HXT H N N 403 TYR N N N N 404 TYR CA C N S 405 TYR C C N N 406 TYR O O N N 407 TYR CB C N N 408 TYR CG C Y N 409 TYR CD1 C Y N 410 TYR CD2 C Y N 411 TYR CE1 C Y N 412 TYR CE2 C Y N 413 TYR CZ C Y N 414 TYR OH O N N 415 TYR OXT O N N 416 TYR H H N N 417 TYR H2 H N N 418 TYR HA H N N 419 TYR HB2 H N N 420 TYR HB3 H N N 421 TYR HD1 H N N 422 TYR HD2 H N N 423 TYR HE1 H N N 424 TYR HE2 H N N 425 TYR HH H N N 426 TYR HXT H N N 427 VAL N N N N 428 VAL CA C N S 429 VAL C C N N 430 VAL O O N N 431 VAL CB C N N 432 VAL CG1 C N N 433 VAL CG2 C N N 434 VAL OXT O N N 435 VAL H H N N 436 VAL H2 H N N 437 VAL HA H N N 438 VAL HB H N N 439 VAL HG11 H N N 440 VAL HG12 H N N 441 VAL HG13 H N N 442 VAL HG21 H N N 443 VAL HG22 H N N 444 VAL HG23 H N N 445 VAL HXT H N N 446 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A52 B O1 sing N N 1 A52 B C12 sing N N 2 A52 B "O2'" sing N N 3 A52 B "O3'" sing N N 4 A52 P O1P sing N N 5 A52 P O2P doub N N 6 A52 P O3P sing N N 7 A52 P "O5'" sing N N 8 A52 N1 C2 doub Y N 9 A52 N1 C6 sing Y N 10 A52 O1 C10 sing N N 11 A52 C2 N3 sing Y N 12 A52 N3 C4 doub Y N 13 A52 C4 C5 sing Y N 14 A52 C4 N9 sing Y N 15 A52 C5 C6 doub Y N 16 A52 C5 N7 sing Y N 17 A52 C6 N6 sing N N 18 A52 N7 C8 doub Y N 19 A52 C8 N9 sing Y N 20 A52 N9 "C1'" sing N N 21 A52 "C1'" "C2'" sing N N 22 A52 "C1'" "O4'" sing N N 23 A52 C10 C11 sing N N 24 A52 C10 C33 sing N N 25 A52 C11 C12 doub Y N 26 A52 C11 C13 sing Y N 27 A52 C12 C16 sing Y N 28 A52 C13 C14 doub Y N 29 A52 C14 C15 sing Y N 30 A52 C15 C16 doub Y N 31 A52 C16 O35 sing N N 32 A52 "C2'" "O2'" sing N N 33 A52 "C2'" "C3'" sing N N 34 A52 "C3'" "O3'" sing N N 35 A52 "C3'" "C4'" sing N N 36 A52 C33 N34 sing N N 37 A52 O35 C36 sing N N 38 A52 C36 C37 sing N N 39 A52 "C4'" "O4'" sing N N 40 A52 "C4'" "C5'" sing N N 41 A52 "C5'" "O5'" sing N N 42 A52 C2 H2 sing N N 43 A52 N6 HN6 sing N N 44 A52 N6 HN6A sing N N 45 A52 C8 H8 sing N N 46 A52 "C1'" "H1'" sing N N 47 A52 C10 H10 sing N N 48 A52 C13 H13 sing N N 49 A52 C14 H14 sing N N 50 A52 C15 H15 sing N N 51 A52 "C2'" "H2'" sing N N 52 A52 "C3'" "H3'" sing N N 53 A52 C33 H33 sing N N 54 A52 C33 H33A sing N N 55 A52 N34 HN34 sing N N 56 A52 N34 HN3A sing N N 57 A52 C36 H36 sing N N 58 A52 C36 H36A sing N N 59 A52 C37 H37 sing N N 60 A52 C37 H37A sing N N 61 A52 C37 H37B sing N N 62 A52 "C4'" "H4'" sing N N 63 A52 "C5'" "H5'" sing N N 64 A52 "C5'" "H5'A" sing N N 65 ALA N CA sing N N 66 ALA N H sing N N 67 ALA N H2 sing N N 68 ALA CA C sing N N 69 ALA CA CB sing N N 70 ALA CA HA sing N N 71 ALA C O doub N N 72 ALA C OXT sing N N 73 ALA CB HB1 sing N N 74 ALA CB HB2 sing N N 75 ALA CB HB3 sing N N 76 ALA OXT HXT sing N N 77 ARG N CA sing N N 78 ARG N H sing N N 79 ARG N H2 sing N N 80 ARG CA C sing N N 81 ARG CA CB sing N N 82 ARG CA HA sing N N 83 ARG C O doub N N 84 ARG C OXT sing N N 85 ARG CB CG sing N N 86 ARG CB HB2 sing N N 87 ARG CB HB3 sing N N 88 ARG CG CD sing N N 89 ARG CG HG2 sing N N 90 ARG CG HG3 sing N N 91 ARG CD NE sing N N 92 ARG CD HD2 sing N N 93 ARG CD HD3 sing N N 94 ARG NE CZ sing N N 95 ARG NE HE sing N N 96 ARG CZ NH1 sing N N 97 ARG CZ NH2 doub N N 98 ARG NH1 HH11 sing N N 99 ARG NH1 HH12 sing N N 100 ARG NH2 HH21 sing N N 101 ARG NH2 HH22 sing N N 102 ARG OXT HXT sing N N 103 ASN N CA sing N N 104 ASN N H sing N N 105 ASN N H2 sing N N 106 ASN CA C sing N N 107 ASN CA CB sing N N 108 ASN CA HA sing N N 109 ASN C O doub N N 110 ASN C OXT sing N N 111 ASN CB CG sing N N 112 ASN CB HB2 sing N N 113 ASN CB HB3 sing N N 114 ASN CG OD1 doub N N 115 ASN CG ND2 sing N N 116 ASN ND2 HD21 sing N N 117 ASN ND2 HD22 sing N N 118 ASN OXT HXT sing N N 119 ASP N CA sing N N 120 ASP N H sing N N 121 ASP N H2 sing N N 122 ASP CA C sing N N 123 ASP CA CB sing N N 124 ASP CA HA sing N N 125 ASP C O doub N N 126 ASP C OXT sing N N 127 ASP CB CG sing N N 128 ASP CB HB2 sing N N 129 ASP CB HB3 sing N N 130 ASP CG OD1 doub N N 131 ASP CG OD2 sing N N 132 ASP OD2 HD2 sing N N 133 ASP OXT HXT sing N N 134 EDO C1 O1 sing N N 135 EDO C1 C2 sing N N 136 EDO C1 H11 sing N N 137 EDO C1 H12 sing N N 138 EDO O1 HO1 sing N N 139 EDO C2 O2 sing N N 140 EDO C2 H21 sing N N 141 EDO C2 H22 sing N N 142 EDO O2 HO2 sing N N 143 GLN N CA sing N N 144 GLN N H sing N N 145 GLN N H2 sing N N 146 GLN CA C sing N N 147 GLN CA CB sing N N 148 GLN CA HA sing N N 149 GLN C O doub N N 150 GLN C OXT sing N N 151 GLN CB CG sing N N 152 GLN CB HB2 sing N N 153 GLN CB HB3 sing N N 154 GLN CG CD sing N N 155 GLN CG HG2 sing N N 156 GLN CG HG3 sing N N 157 GLN CD OE1 doub N N 158 GLN CD NE2 sing N N 159 GLN NE2 HE21 sing N N 160 GLN NE2 HE22 sing N N 161 GLN OXT HXT sing N N 162 GLU N CA sing N N 163 GLU N H sing N N 164 GLU N H2 sing N N 165 GLU CA C sing N N 166 GLU CA CB sing N N 167 GLU CA HA sing N N 168 GLU C O doub N N 169 GLU C OXT sing N N 170 GLU CB CG sing N N 171 GLU CB HB2 sing N N 172 GLU CB HB3 sing N N 173 GLU CG CD sing N N 174 GLU CG HG2 sing N N 175 GLU CG HG3 sing N N 176 GLU CD OE1 doub N N 177 GLU CD OE2 sing N N 178 GLU OE2 HE2 sing N N 179 GLU OXT HXT sing N N 180 GLY N CA sing N N 181 GLY N H sing N N 182 GLY N H2 sing N N 183 GLY CA C sing N N 184 GLY CA HA2 sing N N 185 GLY CA HA3 sing N N 186 GLY C O doub N N 187 GLY C OXT sing N N 188 GLY OXT HXT sing N N 189 HIS N CA sing N N 190 HIS N H sing N N 191 HIS N H2 sing N N 192 HIS CA C sing N N 193 HIS CA CB sing N N 194 HIS CA HA sing N N 195 HIS C O doub N N 196 HIS C OXT sing N N 197 HIS CB CG sing N N 198 HIS CB HB2 sing N N 199 HIS CB HB3 sing N N 200 HIS CG ND1 sing Y N 201 HIS CG CD2 doub Y N 202 HIS ND1 CE1 doub Y N 203 HIS ND1 HD1 sing N N 204 HIS CD2 NE2 sing Y N 205 HIS CD2 HD2 sing N N 206 HIS CE1 NE2 sing Y N 207 HIS CE1 HE1 sing N N 208 HIS NE2 HE2 sing N N 209 HIS OXT HXT sing N N 210 HOH O H1 sing N N 211 HOH O H2 sing N N 212 ILE N CA sing N N 213 ILE N H sing N N 214 ILE N H2 sing N N 215 ILE CA C sing N N 216 ILE CA CB sing N N 217 ILE CA HA sing N N 218 ILE C O doub N N 219 ILE C OXT sing N N 220 ILE CB CG1 sing N N 221 ILE CB CG2 sing N N 222 ILE CB HB sing N N 223 ILE CG1 CD1 sing N N 224 ILE CG1 HG12 sing N N 225 ILE CG1 HG13 sing N N 226 ILE CG2 HG21 sing N N 227 ILE CG2 HG22 sing N N 228 ILE CG2 HG23 sing N N 229 ILE CD1 HD11 sing N N 230 ILE CD1 HD12 sing N N 231 ILE CD1 HD13 sing N N 232 ILE OXT HXT sing N N 233 LEU N CA sing N N 234 LEU N H sing N N 235 LEU N H2 sing N N 236 LEU CA C sing N N 237 LEU CA CB sing N N 238 LEU CA HA sing N N 239 LEU C O doub N N 240 LEU C OXT sing N N 241 LEU CB CG sing N N 242 LEU CB HB2 sing N N 243 LEU CB HB3 sing N N 244 LEU CG CD1 sing N N 245 LEU CG CD2 sing N N 246 LEU CG HG sing N N 247 LEU CD1 HD11 sing N N 248 LEU CD1 HD12 sing N N 249 LEU CD1 HD13 sing N N 250 LEU CD2 HD21 sing N N 251 LEU CD2 HD22 sing N N 252 LEU CD2 HD23 sing N N 253 LEU OXT HXT sing N N 254 LYS N CA sing N N 255 LYS N H sing N N 256 LYS N H2 sing N N 257 LYS CA C sing N N 258 LYS CA CB sing N N 259 LYS CA HA sing N N 260 LYS C O doub N N 261 LYS C OXT sing N N 262 LYS CB CG sing N N 263 LYS CB HB2 sing N N 264 LYS CB HB3 sing N N 265 LYS CG CD sing N N 266 LYS CG HG2 sing N N 267 LYS CG HG3 sing N N 268 LYS CD CE sing N N 269 LYS CD HD2 sing N N 270 LYS CD HD3 sing N N 271 LYS CE NZ sing N N 272 LYS CE HE2 sing N N 273 LYS CE HE3 sing N N 274 LYS NZ HZ1 sing N N 275 LYS NZ HZ2 sing N N 276 LYS NZ HZ3 sing N N 277 LYS OXT HXT sing N N 278 MET N CA sing N N 279 MET N H sing N N 280 MET N H2 sing N N 281 MET CA C sing N N 282 MET CA CB sing N N 283 MET CA HA sing N N 284 MET C O doub N N 285 MET C OXT sing N N 286 MET CB CG sing N N 287 MET CB HB2 sing N N 288 MET CB HB3 sing N N 289 MET CG SD sing N N 290 MET CG HG2 sing N N 291 MET CG HG3 sing N N 292 MET SD CE sing N N 293 MET CE HE1 sing N N 294 MET CE HE2 sing N N 295 MET CE HE3 sing N N 296 MET OXT HXT sing N N 297 PHE N CA sing N N 298 PHE N H sing N N 299 PHE N H2 sing N N 300 PHE CA C sing N N 301 PHE CA CB sing N N 302 PHE CA HA sing N N 303 PHE C O doub N N 304 PHE C OXT sing N N 305 PHE CB CG sing N N 306 PHE CB HB2 sing N N 307 PHE CB HB3 sing N N 308 PHE CG CD1 doub Y N 309 PHE CG CD2 sing Y N 310 PHE CD1 CE1 sing Y N 311 PHE CD1 HD1 sing N N 312 PHE CD2 CE2 doub Y N 313 PHE CD2 HD2 sing N N 314 PHE CE1 CZ doub Y N 315 PHE CE1 HE1 sing N N 316 PHE CE2 CZ sing Y N 317 PHE CE2 HE2 sing N N 318 PHE CZ HZ sing N N 319 PHE OXT HXT sing N N 320 PRO N CA sing N N 321 PRO N CD sing N N 322 PRO N H sing N N 323 PRO CA C sing N N 324 PRO CA CB sing N N 325 PRO CA HA sing N N 326 PRO C O doub N N 327 PRO C OXT sing N N 328 PRO CB CG sing N N 329 PRO CB HB2 sing N N 330 PRO CB HB3 sing N N 331 PRO CG CD sing N N 332 PRO CG HG2 sing N N 333 PRO CG HG3 sing N N 334 PRO CD HD2 sing N N 335 PRO CD HD3 sing N N 336 PRO OXT HXT sing N N 337 SER N CA sing N N 338 SER N H sing N N 339 SER N H2 sing N N 340 SER CA C sing N N 341 SER CA CB sing N N 342 SER CA HA sing N N 343 SER C O doub N N 344 SER C OXT sing N N 345 SER CB OG sing N N 346 SER CB HB2 sing N N 347 SER CB HB3 sing N N 348 SER OG HG sing N N 349 SER OXT HXT sing N N 350 THR N CA sing N N 351 THR N H sing N N 352 THR N H2 sing N N 353 THR CA C sing N N 354 THR CA CB sing N N 355 THR CA HA sing N N 356 THR C O doub N N 357 THR C OXT sing N N 358 THR CB OG1 sing N N 359 THR CB CG2 sing N N 360 THR CB HB sing N N 361 THR OG1 HG1 sing N N 362 THR CG2 HG21 sing N N 363 THR CG2 HG22 sing N N 364 THR CG2 HG23 sing N N 365 THR OXT HXT sing N N 366 TRP N CA sing N N 367 TRP N H sing N N 368 TRP N H2 sing N N 369 TRP CA C sing N N 370 TRP CA CB sing N N 371 TRP CA HA sing N N 372 TRP C O doub N N 373 TRP C OXT sing N N 374 TRP CB CG sing N N 375 TRP CB HB2 sing N N 376 TRP CB HB3 sing N N 377 TRP CG CD1 doub Y N 378 TRP CG CD2 sing Y N 379 TRP CD1 NE1 sing Y N 380 TRP CD1 HD1 sing N N 381 TRP CD2 CE2 doub Y N 382 TRP CD2 CE3 sing Y N 383 TRP NE1 CE2 sing Y N 384 TRP NE1 HE1 sing N N 385 TRP CE2 CZ2 sing Y N 386 TRP CE3 CZ3 doub Y N 387 TRP CE3 HE3 sing N N 388 TRP CZ2 CH2 doub Y N 389 TRP CZ2 HZ2 sing N N 390 TRP CZ3 CH2 sing Y N 391 TRP CZ3 HZ3 sing N N 392 TRP CH2 HH2 sing N N 393 TRP OXT HXT sing N N 394 TYR N CA sing N N 395 TYR N H sing N N 396 TYR N H2 sing N N 397 TYR CA C sing N N 398 TYR CA CB sing N N 399 TYR CA HA sing N N 400 TYR C O doub N N 401 TYR C OXT sing N N 402 TYR CB CG sing N N 403 TYR CB HB2 sing N N 404 TYR CB HB3 sing N N 405 TYR CG CD1 doub Y N 406 TYR CG CD2 sing Y N 407 TYR CD1 CE1 sing Y N 408 TYR CD1 HD1 sing N N 409 TYR CD2 CE2 doub Y N 410 TYR CD2 HD2 sing N N 411 TYR CE1 CZ doub Y N 412 TYR CE1 HE1 sing N N 413 TYR CE2 CZ sing Y N 414 TYR CE2 HE2 sing N N 415 TYR CZ OH sing N N 416 TYR OH HH sing N N 417 TYR OXT HXT sing N N 418 VAL N CA sing N N 419 VAL N H sing N N 420 VAL N H2 sing N N 421 VAL CA C sing N N 422 VAL CA CB sing N N 423 VAL CA HA sing N N 424 VAL C O doub N N 425 VAL C OXT sing N N 426 VAL CB CG1 sing N N 427 VAL CB CG2 sing N N 428 VAL CB HB sing N N 429 VAL CG1 HG11 sing N N 430 VAL CG1 HG12 sing N N 431 VAL CG1 HG13 sing N N 432 VAL CG2 HG21 sing N N 433 VAL CG2 HG22 sing N N 434 VAL CG2 HG23 sing N N 435 VAL OXT HXT sing N N 436 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2AJG _pdbx_initial_refinement_model.details 'PDB ENTRY 2AJG' # _atom_sites.entry_id 5AGR _atom_sites.fract_transf_matrix[1][1] 0.022558 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016168 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012974 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol B C N O P S # loop_