data_5APA # _entry.id 5APA # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.315 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5APA PDBE EBI-64892 WWPDB D_1290064892 # _pdbx_database_PDB_obs_spr.id SPRSDE _pdbx_database_PDB_obs_spr.date 2015-09-23 _pdbx_database_PDB_obs_spr.pdb_id 5APA _pdbx_database_PDB_obs_spr.replace_pdb_id 3RCQ _pdbx_database_PDB_obs_spr.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 5APA _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2015-09-15 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Krojer, T.' 1 ? 'Kochan, G.' 2 ? 'Pfeffer, I.' 3 ? 'McDonough, M.A.' 4 ? 'Pilka, E.' 5 ? 'Hozjan, V.' 6 ? 'Allerston, C.' 7 ? 'Muniz, J.R.' 8 ? 'Chaikuad, A.' 9 ? 'Gileadi, O.' 10 ? 'Kavanagh, K.' 11 ? 'von Delft, F.' 12 ? 'Bountra, C.' 13 ? 'Arrowsmith, C.H.' 14 ? 'Weigelt, J.' 15 ? 'Edwards, A.' 16 ? 'Oppermann, U.' 17 ? # _citation.id primary _citation.title ;Aspartate/asparagine-beta-hydroxylase crystal structures reveal an unexpected epidermal growth factor-like domain substrate disulfide pattern. ; _citation.journal_abbrev 'Nat Commun' _citation.journal_volume 10 _citation.page_first 4910 _citation.page_last 4910 _citation.year 2019 _citation.journal_id_ASTM ? _citation.country UK _citation.journal_id_ISSN 2041-1723 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 31659163 _citation.pdbx_database_id_DOI 10.1038/s41467-019-12711-7 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Pfeffer, I.' 1 ? primary 'Brewitz, L.' 2 ? primary 'Krojer, T.' 3 0000-0003-0661-0814 primary 'Jensen, S.A.' 4 0000-0002-0560-9531 primary 'Kochan, G.T.' 5 ? primary 'Kershaw, N.J.' 6 0000-0002-3554-2622 primary 'Hewitson, K.S.' 7 ? primary 'McNeill, L.A.' 8 ? primary 'Kramer, H.' 9 ? primary 'Munzel, M.' 10 ? primary 'Hopkinson, R.J.' 11 0000-0001-7610-8163 primary 'Oppermann, U.' 12 0000-0001-9984-5342 primary 'Handford, P.A.' 13 ? primary 'McDonough, M.A.' 14 0000-0003-4664-6942 primary 'Schofield, C.J.' 15 0000-0002-0290-6565 # _cell.entry_id 5APA _cell.length_a 133.221 _cell.length_b 133.221 _cell.length_c 44.637 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5APA _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'ASPARTYL/ASPARAGINYL BETA-HYDROXYLASE' 25642.232 1 1.14.11.16 ? 'UNP RESIDUES 562-758' ? 2 non-polymer syn 'NICKEL (II) ION' 58.693 1 ? ? ? ? 3 non-polymer syn '(2S)-2-hydroxybutanedioic acid' 134.087 1 ? ? ? ? 4 non-polymer syn 1,2-ETHANEDIOL 62.068 1 ? ? ? ? 5 water nat water 18.015 139 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'ASPARTATE BETA-HYDROXYLASE, ASP BETA-HYDROXYLASE, PEPTIDE-A SPARTATE BETA-DIOXYGENASE, ASPARTATE BETA-HYDROXYLASE' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MHHHHHHSSGVDLGTENLYFQSMRSLYNVNGLKAQPWWTPKETGYTELVKSLERNWKLIRDEGLAVMDKAKGLFLPEDEN LREKGDWSQFTLWQQGRRNENACKGAPKTCTLLEKFPETTGCRRGQIKYSIMHPGTHVWPHTGPTNCRLRMHLGLVIPKE GCKIRCANETKTWEEGKVLIFDDSFEHEVWQDASSFRLIFIVDVWHPELTPQQRRSLPAI ; _entity_poly.pdbx_seq_one_letter_code_can ;MHHHHHHSSGVDLGTENLYFQSMRSLYNVNGLKAQPWWTPKETGYTELVKSLERNWKLIRDEGLAVMDKAKGLFLPEDEN LREKGDWSQFTLWQQGRRNENACKGAPKTCTLLEKFPETTGCRRGQIKYSIMHPGTHVWPHTGPTNCRLRMHLGLVIPKE GCKIRCANETKTWEEGKVLIFDDSFEHEVWQDASSFRLIFIVDVWHPELTPQQRRSLPAI ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 HIS n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 SER n 1 9 SER n 1 10 GLY n 1 11 VAL n 1 12 ASP n 1 13 LEU n 1 14 GLY n 1 15 THR n 1 16 GLU n 1 17 ASN n 1 18 LEU n 1 19 TYR n 1 20 PHE n 1 21 GLN n 1 22 SER n 1 23 MET n 1 24 ARG n 1 25 SER n 1 26 LEU n 1 27 TYR n 1 28 ASN n 1 29 VAL n 1 30 ASN n 1 31 GLY n 1 32 LEU n 1 33 LYS n 1 34 ALA n 1 35 GLN n 1 36 PRO n 1 37 TRP n 1 38 TRP n 1 39 THR n 1 40 PRO n 1 41 LYS n 1 42 GLU n 1 43 THR n 1 44 GLY n 1 45 TYR n 1 46 THR n 1 47 GLU n 1 48 LEU n 1 49 VAL n 1 50 LYS n 1 51 SER n 1 52 LEU n 1 53 GLU n 1 54 ARG n 1 55 ASN n 1 56 TRP n 1 57 LYS n 1 58 LEU n 1 59 ILE n 1 60 ARG n 1 61 ASP n 1 62 GLU n 1 63 GLY n 1 64 LEU n 1 65 ALA n 1 66 VAL n 1 67 MET n 1 68 ASP n 1 69 LYS n 1 70 ALA n 1 71 LYS n 1 72 GLY n 1 73 LEU n 1 74 PHE n 1 75 LEU n 1 76 PRO n 1 77 GLU n 1 78 ASP n 1 79 GLU n 1 80 ASN n 1 81 LEU n 1 82 ARG n 1 83 GLU n 1 84 LYS n 1 85 GLY n 1 86 ASP n 1 87 TRP n 1 88 SER n 1 89 GLN n 1 90 PHE n 1 91 THR n 1 92 LEU n 1 93 TRP n 1 94 GLN n 1 95 GLN n 1 96 GLY n 1 97 ARG n 1 98 ARG n 1 99 ASN n 1 100 GLU n 1 101 ASN n 1 102 ALA n 1 103 CYS n 1 104 LYS n 1 105 GLY n 1 106 ALA n 1 107 PRO n 1 108 LYS n 1 109 THR n 1 110 CYS n 1 111 THR n 1 112 LEU n 1 113 LEU n 1 114 GLU n 1 115 LYS n 1 116 PHE n 1 117 PRO n 1 118 GLU n 1 119 THR n 1 120 THR n 1 121 GLY n 1 122 CYS n 1 123 ARG n 1 124 ARG n 1 125 GLY n 1 126 GLN n 1 127 ILE n 1 128 LYS n 1 129 TYR n 1 130 SER n 1 131 ILE n 1 132 MET n 1 133 HIS n 1 134 PRO n 1 135 GLY n 1 136 THR n 1 137 HIS n 1 138 VAL n 1 139 TRP n 1 140 PRO n 1 141 HIS n 1 142 THR n 1 143 GLY n 1 144 PRO n 1 145 THR n 1 146 ASN n 1 147 CYS n 1 148 ARG n 1 149 LEU n 1 150 ARG n 1 151 MET n 1 152 HIS n 1 153 LEU n 1 154 GLY n 1 155 LEU n 1 156 VAL n 1 157 ILE n 1 158 PRO n 1 159 LYS n 1 160 GLU n 1 161 GLY n 1 162 CYS n 1 163 LYS n 1 164 ILE n 1 165 ARG n 1 166 CYS n 1 167 ALA n 1 168 ASN n 1 169 GLU n 1 170 THR n 1 171 LYS n 1 172 THR n 1 173 TRP n 1 174 GLU n 1 175 GLU n 1 176 GLY n 1 177 LYS n 1 178 VAL n 1 179 LEU n 1 180 ILE n 1 181 PHE n 1 182 ASP n 1 183 ASP n 1 184 SER n 1 185 PHE n 1 186 GLU n 1 187 HIS n 1 188 GLU n 1 189 VAL n 1 190 TRP n 1 191 GLN n 1 192 ASP n 1 193 ALA n 1 194 SER n 1 195 SER n 1 196 PHE n 1 197 ARG n 1 198 LEU n 1 199 ILE n 1 200 PHE n 1 201 ILE n 1 202 VAL n 1 203 ASP n 1 204 VAL n 1 205 TRP n 1 206 HIS n 1 207 PRO n 1 208 GLU n 1 209 LEU n 1 210 THR n 1 211 PRO n 1 212 GLN n 1 213 GLN n 1 214 ARG n 1 215 ARG n 1 216 SER n 1 217 LEU n 1 218 PRO n 1 219 ALA n 1 220 ILE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HUMAN _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code ASPH_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession Q12797 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5APA _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 24 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 220 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q12797 _struct_ref_seq.db_align_beg 562 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 758 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 562 _struct_ref_seq.pdbx_auth_seq_align_end 758 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5APA MET A 1 ? UNP Q12797 ? ? 'expression tag' 539 1 1 5APA HIS A 2 ? UNP Q12797 ? ? 'expression tag' 540 2 1 5APA HIS A 3 ? UNP Q12797 ? ? 'expression tag' 541 3 1 5APA HIS A 4 ? UNP Q12797 ? ? 'expression tag' 542 4 1 5APA HIS A 5 ? UNP Q12797 ? ? 'expression tag' 543 5 1 5APA HIS A 6 ? UNP Q12797 ? ? 'expression tag' 544 6 1 5APA HIS A 7 ? UNP Q12797 ? ? 'expression tag' 545 7 1 5APA SER A 8 ? UNP Q12797 ? ? 'expression tag' 546 8 1 5APA SER A 9 ? UNP Q12797 ? ? 'expression tag' 547 9 1 5APA GLY A 10 ? UNP Q12797 ? ? 'expression tag' 548 10 1 5APA VAL A 11 ? UNP Q12797 ? ? 'expression tag' 549 11 1 5APA ASP A 12 ? UNP Q12797 ? ? 'expression tag' 550 12 1 5APA LEU A 13 ? UNP Q12797 ? ? 'expression tag' 551 13 1 5APA GLY A 14 ? UNP Q12797 ? ? 'expression tag' 552 14 1 5APA THR A 15 ? UNP Q12797 ? ? 'expression tag' 553 15 1 5APA GLU A 16 ? UNP Q12797 ? ? 'expression tag' 554 16 1 5APA ASN A 17 ? UNP Q12797 ? ? 'expression tag' 555 17 1 5APA LEU A 18 ? UNP Q12797 ? ? 'expression tag' 556 18 1 5APA TYR A 19 ? UNP Q12797 ? ? 'expression tag' 557 19 1 5APA PHE A 20 ? UNP Q12797 ? ? 'expression tag' 558 20 1 5APA GLN A 21 ? UNP Q12797 ? ? 'expression tag' 559 21 1 5APA SER A 22 ? UNP Q12797 ? ? 'expression tag' 560 22 1 5APA MET A 23 ? UNP Q12797 ? ? 'expression tag' 561 23 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LMR non-polymer . '(2S)-2-hydroxybutanedioic acid' L-Malate 'C4 H6 O5' 134.087 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NI non-polymer . 'NICKEL (II) ION' ? 'Ni 2' 58.693 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 5APA _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 4.47 _exptl_crystal.density_percent_sol 72.52 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '50MM SODIUM MALATE, 20% PEG3350, 3% DEXTRAN SULFATE, 20MM NISO4' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC CCD' _diffrn_detector.pdbx_collection_date 2010-10-15 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9763 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'DIAMOND BEAMLINE I04' _diffrn_source.pdbx_synchrotron_site Diamond _diffrn_source.pdbx_synchrotron_beamline I04 _diffrn_source.pdbx_wavelength 0.9763 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 5APA _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 19.87 _reflns.d_resolution_high 2.05 _reflns.number_obs 28746 _reflns.number_all ? _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.09 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 11.50 _reflns.B_iso_Wilson_estimate 36.46 _reflns.pdbx_redundancy 7.4 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.05 _reflns_shell.d_res_low 2.16 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.82 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.30 _reflns_shell.pdbx_redundancy 7.5 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 5APA _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 28718 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.868 _refine.ls_d_res_high 2.050 _refine.ls_percent_reflns_obs 99.94 _refine.ls_R_factor_obs 0.1546 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1529 _refine.ls_R_factor_R_free 0.1855 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 1442 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model NONE _refine.pdbx_method_to_determine_struct SIRAS _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.20 _refine.pdbx_overall_phase_error 21.16 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1589 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 14 _refine_hist.number_atoms_solvent 139 _refine_hist.number_atoms_total 1742 _refine_hist.d_res_high 2.050 _refine_hist.d_res_low 19.868 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.007 ? ? 1678 'X-RAY DIFFRACTION' ? f_angle_d 0.994 ? ? 2284 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 13.749 ? ? 626 'X-RAY DIFFRACTION' ? f_chiral_restr 0.040 ? ? 241 'X-RAY DIFFRACTION' ? f_plane_restr 0.004 ? ? 297 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all 'X-RAY DIFFRACTION' . 2.0500 2.1232 2718 0.2495 100.00 0.2862 . . 143 . . 'X-RAY DIFFRACTION' . 2.1232 2.2081 2694 0.2215 100.00 0.2739 . . 126 . . 'X-RAY DIFFRACTION' . 2.2081 2.3085 2691 0.1939 100.00 0.2333 . . 151 . . 'X-RAY DIFFRACTION' . 2.3085 2.4300 2734 0.1788 100.00 0.1811 . . 132 . . 'X-RAY DIFFRACTION' . 2.4300 2.5819 2682 0.1613 100.00 0.1952 . . 161 . . 'X-RAY DIFFRACTION' . 2.5819 2.7808 2723 0.1699 100.00 0.2297 . . 143 . . 'X-RAY DIFFRACTION' . 2.7808 3.0597 2701 0.1616 100.00 0.2039 . . 156 . . 'X-RAY DIFFRACTION' . 3.0597 3.5003 2762 0.1638 100.00 0.1969 . . 129 . . 'X-RAY DIFFRACTION' . 3.5003 4.4021 2735 0.1253 100.00 0.1444 . . 160 . . 'X-RAY DIFFRACTION' . 4.4021 19.8684 2836 0.1291 100.00 0.1660 . . 141 . . # _struct.entry_id 5APA _struct.title 'Crystal structure of human aspartate beta-hydroxylase isoform a' _struct.pdbx_descriptor 'ASPARTYL/ASPARAGINYL BETA-HYDROXYLASE (E.C.1.14.11.16)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 5APA _struct_keywords.pdbx_keywords OXIDOREDUCTASE _struct_keywords.text 'STRUCTURAL GENOMICS, STRUCTURAL GENOMICS CONSORTIUM, SGC, OXIDOREDUCTASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 39 ? GLY A 44 ? THR A 577 GLY A 582 1 ? 6 HELX_P HELX_P2 2 TYR A 45 ? ASN A 55 ? TYR A 583 ASN A 593 1 ? 11 HELX_P HELX_P3 3 ASN A 55 ? MET A 67 ? ASN A 593 MET A 605 1 ? 13 HELX_P HELX_P4 4 ASN A 99 ? ALA A 106 ? ASN A 637 ALA A 644 1 ? 8 HELX_P HELX_P5 5 ALA A 106 ? GLU A 114 ? ALA A 644 GLU A 652 1 ? 9 HELX_P HELX_P6 6 PHE A 116 ? GLY A 121 ? PHE A 654 GLY A 659 1 ? 6 HELX_P HELX_P7 7 THR A 210 ? LEU A 217 ? THR A 748 LEU A 755 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 103 SG ? ? ? 1_555 A CYS 110 SG ? ? A CYS 641 A CYS 648 1_555 ? ? ? ? ? ? ? 2.042 ? metalc1 metalc ? ? B NI . NI ? ? ? 1_555 C LMR . C1 ? ? A NI 1759 A LMR 1760 1_555 ? ? ? ? ? ? ? 2.528 ? metalc2 metalc ? ? B NI . NI ? ? ? 1_555 C LMR . O1A ? ? A NI 1759 A LMR 1760 1_555 ? ? ? ? ? ? ? 2.211 ? metalc3 metalc ? ? B NI . NI ? ? ? 1_555 C LMR . O1B ? ? A NI 1759 A LMR 1760 1_555 ? ? ? ? ? ? ? 2.208 ? metalc4 metalc ? ? B NI . NI ? ? ? 1_555 E HOH . O ? ? A NI 1759 A HOH 2088 1_555 ? ? ? ? ? ? ? 2.158 ? metalc5 metalc ? ? B NI . NI ? ? ? 1_555 A HIS 141 NE2 ? ? A NI 1759 A HIS 679 1_555 ? ? ? ? ? ? ? 2.062 ? metalc6 metalc ? ? B NI . NI ? ? ? 1_555 E HOH . O ? ? A NI 1759 A HOH 2056 1_555 ? ? ? ? ? ? ? 2.152 ? metalc7 metalc ? ? B NI . NI ? ? ? 1_555 A HIS 187 NE2 ? ? A NI 1759 A HIS 725 1_555 ? ? ? ? ? ? ? 2.134 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 7 ? AB ? 7 ? AC ? 2 ? AD ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AA 3 4 ? anti-parallel AA 4 5 ? anti-parallel AA 5 6 ? anti-parallel AA 6 7 ? parallel AB 1 2 ? anti-parallel AB 2 3 ? anti-parallel AB 3 4 ? anti-parallel AB 4 5 ? anti-parallel AB 5 6 ? anti-parallel AB 6 7 ? anti-parallel AC 1 2 ? parallel AD 1 2 ? anti-parallel AD 2 3 ? anti-parallel AD 3 4 ? anti-parallel AD 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 TRP A 37 ? TRP A 38 ? TRP A 575 TRP A 576 AA 2 VAL A 178 ? PHE A 181 ? VAL A 716 PHE A 719 AA 3 ARG A 148 ? VAL A 156 ? ARG A 686 VAL A 694 AA 4 ARG A 197 ? TRP A 205 ? ARG A 735 TRP A 743 AA 5 GLN A 126 ? MET A 132 ? GLN A 664 MET A 670 AA 6 TRP A 87 ? GLN A 94 ? TRP A 625 GLN A 632 AA 7 ARG A 97 ? ARG A 98 ? ARG A 635 ARG A 636 AB 1 TRP A 37 ? TRP A 38 ? TRP A 575 TRP A 576 AB 2 VAL A 178 ? PHE A 181 ? VAL A 716 PHE A 719 AB 3 ARG A 148 ? VAL A 156 ? ARG A 686 VAL A 694 AB 4 ARG A 197 ? TRP A 205 ? ARG A 735 TRP A 743 AB 5 GLN A 126 ? MET A 132 ? GLN A 664 MET A 670 AB 6 TRP A 87 ? GLN A 94 ? TRP A 625 GLN A 632 AB 7 LEU A 75 ? PRO A 76 ? LEU A 613 PRO A 614 AC 1 ARG A 97 ? ARG A 98 ? ARG A 635 ARG A 636 AC 2 TRP A 87 ? GLN A 94 ? TRP A 625 GLN A 632 AD 1 ARG A 82 ? LYS A 84 ? ARG A 620 LYS A 622 AD 2 THR A 136 ? HIS A 141 ? THR A 674 HIS A 679 AD 3 HIS A 187 ? GLN A 191 ? HIS A 725 GLN A 729 AD 4 CYS A 162 ? CYS A 166 ? CYS A 700 CYS A 704 AD 5 GLU A 169 ? LYS A 171 ? GLU A 707 LYS A 709 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N TRP A 38 ? N TRP A 576 O ILE A 180 ? O ILE A 718 AA 2 3 N PHE A 181 ? N PHE A 719 O ARG A 150 ? O ARG A 688 AA 3 4 N VAL A 156 ? N VAL A 694 O LEU A 198 ? O LEU A 736 AA 4 5 N ASP A 203 ? N ASP A 741 O GLN A 126 ? O GLN A 664 AA 5 6 N ILE A 131 ? N ILE A 669 O SER A 88 ? O SER A 626 AA 6 7 N GLN A 94 ? N GLN A 632 O ARG A 97 ? O ARG A 635 AB 1 2 N TRP A 38 ? N TRP A 576 O ILE A 180 ? O ILE A 718 AB 2 3 N PHE A 181 ? N PHE A 719 O ARG A 150 ? O ARG A 688 AB 3 4 N VAL A 156 ? N VAL A 694 O LEU A 198 ? O LEU A 736 AB 4 5 N ASP A 203 ? N ASP A 741 O GLN A 126 ? O GLN A 664 AB 5 6 N ILE A 131 ? N ILE A 669 O SER A 88 ? O SER A 626 AB 6 7 N GLN A 89 ? N GLN A 627 O LEU A 75 ? O LEU A 613 AC 1 2 N ARG A 97 ? N ARG A 635 O GLN A 94 ? O GLN A 632 AD 1 2 N GLU A 83 ? N GLU A 621 O HIS A 137 ? O HIS A 675 AD 2 3 N HIS A 141 ? N HIS A 679 O HIS A 187 ? O HIS A 725 AD 3 4 N TRP A 190 ? N TRP A 728 O LYS A 163 ? O LYS A 701 AD 4 5 N CYS A 166 ? N CYS A 704 O GLU A 169 ? O GLU A 707 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE NI A 1759' AC2 Software ? ? ? ? 13 'BINDING SITE FOR RESIDUE LMR A 1760' AC3 Software ? ? ? ? 1 'BINDING SITE FOR RESIDUE EDO A 1761' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 HIS A 141 ? HIS A 679 . ? 1_555 ? 2 AC1 5 HIS A 187 ? HIS A 725 . ? 1_555 ? 3 AC1 5 LMR C . ? LMR A 1760 . ? 1_555 ? 4 AC1 5 HOH E . ? HOH A 2056 . ? 1_555 ? 5 AC1 5 HOH E . ? HOH A 2088 . ? 1_555 ? 6 AC2 13 TRP A 87 ? TRP A 625 . ? 1_555 ? 7 AC2 13 SER A 130 ? SER A 668 . ? 1_555 ? 8 AC2 13 MET A 132 ? MET A 670 . ? 1_555 ? 9 AC2 13 HIS A 141 ? HIS A 679 . ? 1_555 ? 10 AC2 13 ARG A 150 ? ARG A 688 . ? 1_555 ? 11 AC2 13 HIS A 152 ? HIS A 690 . ? 1_555 ? 12 AC2 13 HIS A 187 ? HIS A 725 . ? 1_555 ? 13 AC2 13 ARG A 197 ? ARG A 735 . ? 1_555 ? 14 AC2 13 ILE A 199 ? ILE A 737 . ? 1_555 ? 15 AC2 13 ILE A 201 ? ILE A 739 . ? 1_555 ? 16 AC2 13 NI B . ? NI A 1759 . ? 1_555 ? 17 AC2 13 HOH E . ? HOH A 2055 . ? 1_555 ? 18 AC2 13 HOH E . ? HOH A 2056 . ? 1_555 ? 19 AC3 1 SER A 184 ? SER A 722 . ? 1_555 ? # _database_PDB_matrix.entry_id 5APA _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 5APA _atom_sites.fract_transf_matrix[1][1] 0.007506 _atom_sites.fract_transf_matrix[1][2] 0.004334 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.008668 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.022403 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N NI O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 539 ? ? ? A . n A 1 2 HIS 2 540 ? ? ? A . n A 1 3 HIS 3 541 ? ? ? A . n A 1 4 HIS 4 542 ? ? ? A . n A 1 5 HIS 5 543 ? ? ? A . n A 1 6 HIS 6 544 ? ? ? A . n A 1 7 HIS 7 545 ? ? ? A . n A 1 8 SER 8 546 ? ? ? A . n A 1 9 SER 9 547 ? ? ? A . n A 1 10 GLY 10 548 ? ? ? A . n A 1 11 VAL 11 549 ? ? ? A . n A 1 12 ASP 12 550 ? ? ? A . n A 1 13 LEU 13 551 ? ? ? A . n A 1 14 GLY 14 552 ? ? ? A . n A 1 15 THR 15 553 ? ? ? A . n A 1 16 GLU 16 554 ? ? ? A . n A 1 17 ASN 17 555 ? ? ? A . n A 1 18 LEU 18 556 ? ? ? A . n A 1 19 TYR 19 557 ? ? ? A . n A 1 20 PHE 20 558 ? ? ? A . n A 1 21 GLN 21 559 ? ? ? A . n A 1 22 SER 22 560 ? ? ? A . n A 1 23 MET 23 561 ? ? ? A . n A 1 24 ARG 24 562 ? ? ? A . n A 1 25 SER 25 563 563 SER SER A . n A 1 26 LEU 26 564 564 LEU LEU A . n A 1 27 TYR 27 565 565 TYR TYR A . n A 1 28 ASN 28 566 566 ASN ASN A . n A 1 29 VAL 29 567 567 VAL VAL A . n A 1 30 ASN 30 568 568 ASN ASN A . n A 1 31 GLY 31 569 569 GLY GLY A . n A 1 32 LEU 32 570 570 LEU LEU A . n A 1 33 LYS 33 571 571 LYS LYS A . n A 1 34 ALA 34 572 572 ALA ALA A . n A 1 35 GLN 35 573 573 GLN GLN A . n A 1 36 PRO 36 574 574 PRO PRO A . n A 1 37 TRP 37 575 575 TRP TRP A . n A 1 38 TRP 38 576 576 TRP TRP A . n A 1 39 THR 39 577 577 THR THR A . n A 1 40 PRO 40 578 578 PRO PRO A . n A 1 41 LYS 41 579 579 LYS LYS A . n A 1 42 GLU 42 580 580 GLU GLU A . n A 1 43 THR 43 581 581 THR THR A . n A 1 44 GLY 44 582 582 GLY GLY A . n A 1 45 TYR 45 583 583 TYR TYR A . n A 1 46 THR 46 584 584 THR THR A . n A 1 47 GLU 47 585 585 GLU GLU A . n A 1 48 LEU 48 586 586 LEU LEU A . n A 1 49 VAL 49 587 587 VAL VAL A . n A 1 50 LYS 50 588 588 LYS LYS A . n A 1 51 SER 51 589 589 SER SER A . n A 1 52 LEU 52 590 590 LEU LEU A . n A 1 53 GLU 53 591 591 GLU GLU A . n A 1 54 ARG 54 592 592 ARG ARG A . n A 1 55 ASN 55 593 593 ASN ASN A . n A 1 56 TRP 56 594 594 TRP TRP A . n A 1 57 LYS 57 595 595 LYS LYS A . n A 1 58 LEU 58 596 596 LEU LEU A . n A 1 59 ILE 59 597 597 ILE ILE A . n A 1 60 ARG 60 598 598 ARG ARG A . n A 1 61 ASP 61 599 599 ASP ASP A . n A 1 62 GLU 62 600 600 GLU GLU A . n A 1 63 GLY 63 601 601 GLY GLY A . n A 1 64 LEU 64 602 602 LEU LEU A . n A 1 65 ALA 65 603 603 ALA ALA A . n A 1 66 VAL 66 604 604 VAL VAL A . n A 1 67 MET 67 605 605 MET MET A . n A 1 68 ASP 68 606 606 ASP ASP A . n A 1 69 LYS 69 607 607 LYS LYS A . n A 1 70 ALA 70 608 608 ALA ALA A . n A 1 71 LYS 71 609 609 LYS LYS A . n A 1 72 GLY 72 610 610 GLY GLY A . n A 1 73 LEU 73 611 611 LEU LEU A . n A 1 74 PHE 74 612 612 PHE PHE A . n A 1 75 LEU 75 613 613 LEU LEU A . n A 1 76 PRO 76 614 614 PRO PRO A . n A 1 77 GLU 77 615 615 GLU GLU A . n A 1 78 ASP 78 616 616 ASP ASP A . n A 1 79 GLU 79 617 617 GLU GLU A . n A 1 80 ASN 80 618 618 ASN ASN A . n A 1 81 LEU 81 619 619 LEU LEU A . n A 1 82 ARG 82 620 620 ARG ARG A . n A 1 83 GLU 83 621 621 GLU GLU A . n A 1 84 LYS 84 622 622 LYS LYS A . n A 1 85 GLY 85 623 623 GLY GLY A . n A 1 86 ASP 86 624 624 ASP ASP A . n A 1 87 TRP 87 625 625 TRP TRP A . n A 1 88 SER 88 626 626 SER SER A . n A 1 89 GLN 89 627 627 GLN GLN A . n A 1 90 PHE 90 628 628 PHE PHE A . n A 1 91 THR 91 629 629 THR THR A . n A 1 92 LEU 92 630 630 LEU LEU A . n A 1 93 TRP 93 631 631 TRP TRP A . n A 1 94 GLN 94 632 632 GLN GLN A . n A 1 95 GLN 95 633 633 GLN GLN A . n A 1 96 GLY 96 634 634 GLY GLY A . n A 1 97 ARG 97 635 635 ARG ARG A . n A 1 98 ARG 98 636 636 ARG ARG A . n A 1 99 ASN 99 637 637 ASN ASN A . n A 1 100 GLU 100 638 638 GLU GLU A . n A 1 101 ASN 101 639 639 ASN ASN A . n A 1 102 ALA 102 640 640 ALA ALA A . n A 1 103 CYS 103 641 641 CYS CYS A . n A 1 104 LYS 104 642 642 LYS LYS A . n A 1 105 GLY 105 643 643 GLY GLY A . n A 1 106 ALA 106 644 644 ALA ALA A . n A 1 107 PRO 107 645 645 PRO PRO A . n A 1 108 LYS 108 646 646 LYS LYS A . n A 1 109 THR 109 647 647 THR THR A . n A 1 110 CYS 110 648 648 CYS CYS A . n A 1 111 THR 111 649 649 THR THR A . n A 1 112 LEU 112 650 650 LEU LEU A . n A 1 113 LEU 113 651 651 LEU LEU A . n A 1 114 GLU 114 652 652 GLU GLU A . n A 1 115 LYS 115 653 653 LYS LYS A . n A 1 116 PHE 116 654 654 PHE PHE A . n A 1 117 PRO 117 655 655 PRO PRO A . n A 1 118 GLU 118 656 656 GLU GLU A . n A 1 119 THR 119 657 657 THR THR A . n A 1 120 THR 120 658 658 THR THR A . n A 1 121 GLY 121 659 659 GLY GLY A . n A 1 122 CYS 122 660 660 CYS CYS A . n A 1 123 ARG 123 661 661 ARG ARG A . n A 1 124 ARG 124 662 662 ARG ARG A . n A 1 125 GLY 125 663 663 GLY GLY A . n A 1 126 GLN 126 664 664 GLN GLN A . n A 1 127 ILE 127 665 665 ILE ILE A . n A 1 128 LYS 128 666 666 LYS LYS A . n A 1 129 TYR 129 667 667 TYR TYR A . n A 1 130 SER 130 668 668 SER SER A . n A 1 131 ILE 131 669 669 ILE ILE A . n A 1 132 MET 132 670 670 MET MET A . n A 1 133 HIS 133 671 671 HIS HIS A . n A 1 134 PRO 134 672 672 PRO PRO A . n A 1 135 GLY 135 673 673 GLY GLY A . n A 1 136 THR 136 674 674 THR THR A . n A 1 137 HIS 137 675 675 HIS HIS A . n A 1 138 VAL 138 676 676 VAL VAL A . n A 1 139 TRP 139 677 677 TRP TRP A . n A 1 140 PRO 140 678 678 PRO PRO A . n A 1 141 HIS 141 679 679 HIS HIS A . n A 1 142 THR 142 680 680 THR THR A . n A 1 143 GLY 143 681 681 GLY GLY A . n A 1 144 PRO 144 682 682 PRO PRO A . n A 1 145 THR 145 683 683 THR THR A . n A 1 146 ASN 146 684 684 ASN ASN A . n A 1 147 CYS 147 685 685 CYS CYS A . n A 1 148 ARG 148 686 686 ARG ARG A . n A 1 149 LEU 149 687 687 LEU LEU A . n A 1 150 ARG 150 688 688 ARG ARG A . n A 1 151 MET 151 689 689 MET MET A . n A 1 152 HIS 152 690 690 HIS HIS A . n A 1 153 LEU 153 691 691 LEU LEU A . n A 1 154 GLY 154 692 692 GLY GLY A . n A 1 155 LEU 155 693 693 LEU LEU A . n A 1 156 VAL 156 694 694 VAL VAL A . n A 1 157 ILE 157 695 695 ILE ILE A . n A 1 158 PRO 158 696 696 PRO PRO A . n A 1 159 LYS 159 697 697 LYS LYS A . n A 1 160 GLU 160 698 698 GLU GLU A . n A 1 161 GLY 161 699 699 GLY GLY A . n A 1 162 CYS 162 700 700 CYS CYS A . n A 1 163 LYS 163 701 701 LYS LYS A . n A 1 164 ILE 164 702 702 ILE ILE A . n A 1 165 ARG 165 703 703 ARG ARG A . n A 1 166 CYS 166 704 704 CYS CYS A . n A 1 167 ALA 167 705 705 ALA ALA A . n A 1 168 ASN 168 706 706 ASN ASN A . n A 1 169 GLU 169 707 707 GLU GLU A . n A 1 170 THR 170 708 708 THR THR A . n A 1 171 LYS 171 709 709 LYS LYS A . n A 1 172 THR 172 710 710 THR THR A . n A 1 173 TRP 173 711 711 TRP TRP A . n A 1 174 GLU 174 712 712 GLU GLU A . n A 1 175 GLU 175 713 713 GLU GLU A . n A 1 176 GLY 176 714 714 GLY GLY A . n A 1 177 LYS 177 715 715 LYS LYS A . n A 1 178 VAL 178 716 716 VAL VAL A . n A 1 179 LEU 179 717 717 LEU LEU A . n A 1 180 ILE 180 718 718 ILE ILE A . n A 1 181 PHE 181 719 719 PHE PHE A . n A 1 182 ASP 182 720 720 ASP ASP A . n A 1 183 ASP 183 721 721 ASP ASP A . n A 1 184 SER 184 722 722 SER SER A . n A 1 185 PHE 185 723 723 PHE PHE A . n A 1 186 GLU 186 724 724 GLU GLU A . n A 1 187 HIS 187 725 725 HIS HIS A . n A 1 188 GLU 188 726 726 GLU GLU A . n A 1 189 VAL 189 727 727 VAL VAL A . n A 1 190 TRP 190 728 728 TRP TRP A . n A 1 191 GLN 191 729 729 GLN GLN A . n A 1 192 ASP 192 730 730 ASP ASP A . n A 1 193 ALA 193 731 731 ALA ALA A . n A 1 194 SER 194 732 732 SER SER A . n A 1 195 SER 195 733 733 SER SER A . n A 1 196 PHE 196 734 734 PHE PHE A . n A 1 197 ARG 197 735 735 ARG ARG A . n A 1 198 LEU 198 736 736 LEU LEU A . n A 1 199 ILE 199 737 737 ILE ILE A . n A 1 200 PHE 200 738 738 PHE PHE A . n A 1 201 ILE 201 739 739 ILE ILE A . n A 1 202 VAL 202 740 740 VAL VAL A . n A 1 203 ASP 203 741 741 ASP ASP A . n A 1 204 VAL 204 742 742 VAL VAL A . n A 1 205 TRP 205 743 743 TRP TRP A . n A 1 206 HIS 206 744 744 HIS HIS A . n A 1 207 PRO 207 745 745 PRO PRO A . n A 1 208 GLU 208 746 746 GLU GLU A . n A 1 209 LEU 209 747 747 LEU LEU A . n A 1 210 THR 210 748 748 THR THR A . n A 1 211 PRO 211 749 749 PRO PRO A . n A 1 212 GLN 212 750 750 GLN GLN A . n A 1 213 GLN 213 751 751 GLN GLN A . n A 1 214 ARG 214 752 752 ARG ARG A . n A 1 215 ARG 215 753 753 ARG ARG A . n A 1 216 SER 216 754 754 SER SER A . n A 1 217 LEU 217 755 755 LEU LEU A . n A 1 218 PRO 218 756 756 PRO PRO A . n A 1 219 ALA 219 757 757 ALA ALA A . n A 1 220 ILE 220 758 758 ILE ILE A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NI 1 1759 1759 NI NI A . C 3 LMR 1 1760 1760 LMR LMR A . D 4 EDO 1 1761 1761 EDO EDO A . E 5 HOH 1 2001 2001 HOH HOH A . E 5 HOH 2 2002 2002 HOH HOH A . E 5 HOH 3 2003 2003 HOH HOH A . E 5 HOH 4 2004 2004 HOH HOH A . E 5 HOH 5 2005 2005 HOH HOH A . E 5 HOH 6 2006 2006 HOH HOH A . E 5 HOH 7 2007 2007 HOH HOH A . E 5 HOH 8 2008 2008 HOH HOH A . E 5 HOH 9 2009 2009 HOH HOH A . E 5 HOH 10 2010 2010 HOH HOH A . E 5 HOH 11 2011 2011 HOH HOH A . E 5 HOH 12 2012 2012 HOH HOH A . E 5 HOH 13 2013 2013 HOH HOH A . E 5 HOH 14 2014 2014 HOH HOH A . E 5 HOH 15 2015 2015 HOH HOH A . E 5 HOH 16 2016 2016 HOH HOH A . E 5 HOH 17 2017 2017 HOH HOH A . E 5 HOH 18 2018 2018 HOH HOH A . E 5 HOH 19 2019 2019 HOH HOH A . E 5 HOH 20 2020 2020 HOH HOH A . E 5 HOH 21 2021 2021 HOH HOH A . E 5 HOH 22 2022 2022 HOH HOH A . E 5 HOH 23 2023 2023 HOH HOH A . E 5 HOH 24 2024 2024 HOH HOH A . E 5 HOH 25 2025 2025 HOH HOH A . E 5 HOH 26 2026 2026 HOH HOH A . E 5 HOH 27 2027 2027 HOH HOH A . E 5 HOH 28 2028 2028 HOH HOH A . E 5 HOH 29 2029 2029 HOH HOH A . E 5 HOH 30 2030 2030 HOH HOH A . E 5 HOH 31 2031 2031 HOH HOH A . E 5 HOH 32 2032 2032 HOH HOH A . E 5 HOH 33 2033 2033 HOH HOH A . E 5 HOH 34 2034 2034 HOH HOH A . E 5 HOH 35 2035 2035 HOH HOH A . E 5 HOH 36 2036 2036 HOH HOH A . E 5 HOH 37 2037 2037 HOH HOH A . E 5 HOH 38 2038 2038 HOH HOH A . E 5 HOH 39 2039 2039 HOH HOH A . E 5 HOH 40 2040 2040 HOH HOH A . E 5 HOH 41 2041 2041 HOH HOH A . E 5 HOH 42 2042 2042 HOH HOH A . E 5 HOH 43 2043 2043 HOH HOH A . E 5 HOH 44 2044 2044 HOH HOH A . E 5 HOH 45 2045 2045 HOH HOH A . E 5 HOH 46 2046 2046 HOH HOH A . E 5 HOH 47 2047 2047 HOH HOH A . E 5 HOH 48 2048 2048 HOH HOH A . E 5 HOH 49 2049 2049 HOH HOH A . E 5 HOH 50 2050 2050 HOH HOH A . E 5 HOH 51 2051 2051 HOH HOH A . E 5 HOH 52 2052 2052 HOH HOH A . E 5 HOH 53 2053 2053 HOH HOH A . E 5 HOH 54 2054 2054 HOH HOH A . E 5 HOH 55 2055 2055 HOH HOH A . E 5 HOH 56 2056 2056 HOH HOH A . E 5 HOH 57 2057 2057 HOH HOH A . E 5 HOH 58 2058 2058 HOH HOH A . E 5 HOH 59 2059 2059 HOH HOH A . E 5 HOH 60 2060 2060 HOH HOH A . E 5 HOH 61 2061 2061 HOH HOH A . E 5 HOH 62 2062 2062 HOH HOH A . E 5 HOH 63 2063 2063 HOH HOH A . E 5 HOH 64 2064 2064 HOH HOH A . E 5 HOH 65 2065 2065 HOH HOH A . E 5 HOH 66 2066 2066 HOH HOH A . E 5 HOH 67 2067 2067 HOH HOH A . E 5 HOH 68 2068 2068 HOH HOH A . E 5 HOH 69 2069 2069 HOH HOH A . E 5 HOH 70 2070 2070 HOH HOH A . E 5 HOH 71 2071 2071 HOH HOH A . E 5 HOH 72 2072 2072 HOH HOH A . E 5 HOH 73 2073 2073 HOH HOH A . E 5 HOH 74 2074 2074 HOH HOH A . E 5 HOH 75 2075 2075 HOH HOH A . E 5 HOH 76 2076 2076 HOH HOH A . E 5 HOH 77 2077 2077 HOH HOH A . E 5 HOH 78 2078 2078 HOH HOH A . E 5 HOH 79 2079 2079 HOH HOH A . E 5 HOH 80 2080 2080 HOH HOH A . E 5 HOH 81 2081 2081 HOH HOH A . E 5 HOH 82 2082 2082 HOH HOH A . E 5 HOH 83 2083 2083 HOH HOH A . E 5 HOH 84 2084 2084 HOH HOH A . E 5 HOH 85 2085 2085 HOH HOH A . E 5 HOH 86 2086 2086 HOH HOH A . E 5 HOH 87 2087 2087 HOH HOH A . E 5 HOH 88 2088 2088 HOH HOH A . E 5 HOH 89 2089 2089 HOH HOH A . E 5 HOH 90 2090 2090 HOH HOH A . E 5 HOH 91 2091 2091 HOH HOH A . E 5 HOH 92 2092 2092 HOH HOH A . E 5 HOH 93 2093 2093 HOH HOH A . E 5 HOH 94 2094 2094 HOH HOH A . E 5 HOH 95 2095 2095 HOH HOH A . E 5 HOH 96 2096 2096 HOH HOH A . E 5 HOH 97 2097 2097 HOH HOH A . E 5 HOH 98 2098 2098 HOH HOH A . E 5 HOH 99 2099 2099 HOH HOH A . E 5 HOH 100 2100 2100 HOH HOH A . E 5 HOH 101 2101 2101 HOH HOH A . E 5 HOH 102 2102 2102 HOH HOH A . E 5 HOH 103 2103 2103 HOH HOH A . E 5 HOH 104 2104 2104 HOH HOH A . E 5 HOH 105 2105 2105 HOH HOH A . E 5 HOH 106 2106 2106 HOH HOH A . E 5 HOH 107 2107 2107 HOH HOH A . E 5 HOH 108 2108 2108 HOH HOH A . E 5 HOH 109 2109 2109 HOH HOH A . E 5 HOH 110 2110 2110 HOH HOH A . E 5 HOH 111 2111 2111 HOH HOH A . E 5 HOH 112 2112 2112 HOH HOH A . E 5 HOH 113 2113 2113 HOH HOH A . E 5 HOH 114 2114 2114 HOH HOH A . E 5 HOH 115 2115 2115 HOH HOH A . E 5 HOH 116 2116 2116 HOH HOH A . E 5 HOH 117 2117 2117 HOH HOH A . E 5 HOH 118 2118 2118 HOH HOH A . E 5 HOH 119 2119 2119 HOH HOH A . E 5 HOH 120 2120 2120 HOH HOH A . E 5 HOH 121 2121 2121 HOH HOH A . E 5 HOH 122 2122 2122 HOH HOH A . E 5 HOH 123 2123 2123 HOH HOH A . E 5 HOH 124 2124 2124 HOH HOH A . E 5 HOH 125 2125 2125 HOH HOH A . E 5 HOH 126 2126 2126 HOH HOH A . E 5 HOH 127 2127 2127 HOH HOH A . E 5 HOH 128 2128 2128 HOH HOH A . E 5 HOH 129 2129 2129 HOH HOH A . E 5 HOH 130 2130 2130 HOH HOH A . E 5 HOH 131 2131 2131 HOH HOH A . E 5 HOH 132 2132 2132 HOH HOH A . E 5 HOH 133 2133 2133 HOH HOH A . E 5 HOH 134 2134 2134 HOH HOH A . E 5 HOH 135 2135 2135 HOH HOH A . E 5 HOH 136 2136 2136 HOH HOH A . E 5 HOH 137 2137 2137 HOH HOH A . E 5 HOH 138 2138 2138 HOH HOH A . E 5 HOH 139 2139 2139 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 C1 ? C LMR . ? A LMR 1760 ? 1_555 NI ? B NI . ? A NI 1759 ? 1_555 O1A ? C LMR . ? A LMR 1760 ? 1_555 30.5 ? 2 C1 ? C LMR . ? A LMR 1760 ? 1_555 NI ? B NI . ? A NI 1759 ? 1_555 O1B ? C LMR . ? A LMR 1760 ? 1_555 30.0 ? 3 O1A ? C LMR . ? A LMR 1760 ? 1_555 NI ? B NI . ? A NI 1759 ? 1_555 O1B ? C LMR . ? A LMR 1760 ? 1_555 60.4 ? 4 C1 ? C LMR . ? A LMR 1760 ? 1_555 NI ? B NI . ? A NI 1759 ? 1_555 O ? E HOH . ? A HOH 2088 ? 1_555 129.0 ? 5 O1A ? C LMR . ? A LMR 1760 ? 1_555 NI ? B NI . ? A NI 1759 ? 1_555 O ? E HOH . ? A HOH 2088 ? 1_555 98.6 ? 6 O1B ? C LMR . ? A LMR 1760 ? 1_555 NI ? B NI . ? A NI 1759 ? 1_555 O ? E HOH . ? A HOH 2088 ? 1_555 159.0 ? 7 C1 ? C LMR . ? A LMR 1760 ? 1_555 NI ? B NI . ? A NI 1759 ? 1_555 NE2 ? A HIS 141 ? A HIS 679 ? 1_555 128.9 ? 8 O1A ? C LMR . ? A LMR 1760 ? 1_555 NI ? B NI . ? A NI 1759 ? 1_555 NE2 ? A HIS 141 ? A HIS 679 ? 1_555 159.1 ? 9 O1B ? C LMR . ? A LMR 1760 ? 1_555 NI ? B NI . ? A NI 1759 ? 1_555 NE2 ? A HIS 141 ? A HIS 679 ? 1_555 99.1 ? 10 O ? E HOH . ? A HOH 2088 ? 1_555 NI ? B NI . ? A NI 1759 ? 1_555 NE2 ? A HIS 141 ? A HIS 679 ? 1_555 102.0 ? 11 C1 ? C LMR . ? A LMR 1760 ? 1_555 NI ? B NI . ? A NI 1759 ? 1_555 O ? E HOH . ? A HOH 2056 ? 1_555 88.8 ? 12 O1A ? C LMR . ? A LMR 1760 ? 1_555 NI ? B NI . ? A NI 1759 ? 1_555 O ? E HOH . ? A HOH 2056 ? 1_555 89.1 ? 13 O1B ? C LMR . ? A LMR 1760 ? 1_555 NI ? B NI . ? A NI 1759 ? 1_555 O ? E HOH . ? A HOH 2056 ? 1_555 90.3 ? 14 O ? E HOH . ? A HOH 2088 ? 1_555 NI ? B NI . ? A NI 1759 ? 1_555 O ? E HOH . ? A HOH 2056 ? 1_555 90.8 ? 15 NE2 ? A HIS 141 ? A HIS 679 ? 1_555 NI ? B NI . ? A NI 1759 ? 1_555 O ? E HOH . ? A HOH 2056 ? 1_555 87.1 ? 16 C1 ? C LMR . ? A LMR 1760 ? 1_555 NI ? B NI . ? A NI 1759 ? 1_555 NE2 ? A HIS 187 ? A HIS 725 ? 1_555 97.3 ? 17 O1A ? C LMR . ? A LMR 1760 ? 1_555 NI ? B NI . ? A NI 1759 ? 1_555 NE2 ? A HIS 187 ? A HIS 725 ? 1_555 97.5 ? 18 O1B ? C LMR . ? A LMR 1760 ? 1_555 NI ? B NI . ? A NI 1759 ? 1_555 NE2 ? A HIS 187 ? A HIS 725 ? 1_555 93.7 ? 19 O ? E HOH . ? A HOH 2088 ? 1_555 NI ? B NI . ? A NI 1759 ? 1_555 NE2 ? A HIS 187 ? A HIS 725 ? 1_555 87.4 ? 20 NE2 ? A HIS 141 ? A HIS 679 ? 1_555 NI ? B NI . ? A NI 1759 ? 1_555 NE2 ? A HIS 187 ? A HIS 725 ? 1_555 87.1 ? 21 O ? E HOH . ? A HOH 2056 ? 1_555 NI ? B NI . ? A NI 1759 ? 1_555 NE2 ? A HIS 187 ? A HIS 725 ? 1_555 173.4 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-09-23 2 'Structure model' 1 1 2018-01-24 3 'Structure model' 1 2 2018-02-21 4 'Structure model' 1 3 2019-11-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 2 'Structure model' 'Structure summary' 3 3 'Structure model' 'Structure summary' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' audit_author 2 2 'Structure model' citation_author 3 3 'Structure model' audit_author 4 4 'Structure model' citation 5 4 'Structure model' citation_author 6 4 'Structure model' pdbx_database_status # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_audit_author.name' 2 2 'Structure model' '_citation_author.name' 3 3 'Structure model' '_audit_author.name' 4 4 'Structure model' '_citation.country' 5 4 'Structure model' '_citation.journal_abbrev' 6 4 'Structure model' '_citation.journal_id_CSD' 7 4 'Structure model' '_citation.journal_id_ISSN' 8 4 'Structure model' '_citation.journal_volume' 9 4 'Structure model' '_citation.page_first' 10 4 'Structure model' '_citation.page_last' 11 4 'Structure model' '_citation.pdbx_database_id_DOI' 12 4 'Structure model' '_citation.pdbx_database_id_PubMed' 13 4 'Structure model' '_citation.title' 14 4 'Structure model' '_citation.year' 15 4 'Structure model' '_citation_author.identifier_ORCID' 16 4 'Structure model' '_citation_author.name' 17 4 'Structure model' '_pdbx_database_status.status_code_sf' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 86.3001 33.2373 3.6785 0.3576 0.3623 0.5464 0.0067 0.0146 -0.0170 1.3451 1.9036 2.1873 1.3849 0.9751 0.1823 -0.1489 0.1686 -0.4697 -0.0337 0.1428 -0.2714 0.1592 0.0457 -0.0035 'X-RAY DIFFRACTION' 2 ? refined 94.7210 56.2006 1.2855 0.4509 0.4849 0.5007 -0.1359 0.0048 0.0714 3.8605 0.4713 2.4049 1.2169 -1.7698 -0.1750 0.0773 0.5995 0.9389 -0.3558 0.2065 -0.3609 -0.6422 0.1957 -0.1791 'X-RAY DIFFRACTION' 3 ? refined 84.4606 49.3207 -0.5467 0.3707 0.4133 0.3924 -0.0895 -0.0413 0.0506 2.5350 1.7774 1.1455 0.6225 0.0965 -0.0656 -0.2249 0.5080 0.2717 -0.4254 0.1717 0.2232 -0.2837 0.0901 0.0322 'X-RAY DIFFRACTION' 4 ? refined 86.3481 42.6951 9.6791 0.2664 0.3241 0.3614 -0.0391 -0.0060 0.0278 2.0410 1.6734 1.0542 1.0746 -0.1531 0.2150 0.0187 -0.1762 -0.1743 -0.0062 -0.0102 -0.1284 0.0573 0.1075 -0.0003 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? ;CHAIN 'A' AND (RESID 563 THROUGH 593 ) ; 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? ;CHAIN 'A' AND (RESID 594 THROUGH 614 ) ; 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? ;CHAIN 'A' AND (RESID 615 THROUGH 663 ) ; 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? ;CHAIN 'A' AND (RESID 664 THROUGH 758 ) ; # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal PHENIX refinement '(PHENIX.REFINE)' ? 1 XDS 'data reduction' . ? 2 SCALA 'data scaling' . ? 3 SHARP phasing . ? 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OG1 A THR 710 ? A O A HOH 2100 ? ? 2.12 2 1 O A HOH 2033 ? ? O A HOH 2034 ? ? 2.15 3 1 NH1 A ARG 661 ? ? O A LEU 755 ? ? 2.16 4 1 OD1 A ASP 624 ? B O A HOH 2063 ? ? 2.17 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TYR A 583 ? ? -88.39 49.72 2 1 ALA A 705 ? ? 56.18 -121.44 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 579 ? CE ? A LYS 41 CE 2 1 Y 1 A LYS 579 ? NZ ? A LYS 41 NZ 3 1 Y 1 A LYS 588 ? CE ? A LYS 50 CE 4 1 Y 1 A LYS 588 ? NZ ? A LYS 50 NZ 5 1 Y 1 A LYS 607 ? CG ? A LYS 69 CG 6 1 Y 1 A LYS 607 ? CD ? A LYS 69 CD 7 1 Y 1 A LYS 607 ? CE ? A LYS 69 CE 8 1 Y 1 A LYS 607 ? NZ ? A LYS 69 NZ 9 1 Y 1 A ARG 635 ? CD ? A ARG 97 CD 10 1 Y 1 A ARG 635 ? NE ? A ARG 97 NE 11 1 Y 1 A ARG 635 ? CZ ? A ARG 97 CZ 12 1 Y 1 A ARG 635 ? NH1 ? A ARG 97 NH1 13 1 Y 1 A ARG 635 ? NH2 ? A ARG 97 NH2 14 1 Y 1 A LYS 653 ? CE ? A LYS 115 CE 15 1 Y 1 A LYS 653 ? NZ ? A LYS 115 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 539 ? A MET 1 2 1 Y 1 A HIS 540 ? A HIS 2 3 1 Y 1 A HIS 541 ? A HIS 3 4 1 Y 1 A HIS 542 ? A HIS 4 5 1 Y 1 A HIS 543 ? A HIS 5 6 1 Y 1 A HIS 544 ? A HIS 6 7 1 Y 1 A HIS 545 ? A HIS 7 8 1 Y 1 A SER 546 ? A SER 8 9 1 Y 1 A SER 547 ? A SER 9 10 1 Y 1 A GLY 548 ? A GLY 10 11 1 Y 1 A VAL 549 ? A VAL 11 12 1 Y 1 A ASP 550 ? A ASP 12 13 1 Y 1 A LEU 551 ? A LEU 13 14 1 Y 1 A GLY 552 ? A GLY 14 15 1 Y 1 A THR 553 ? A THR 15 16 1 Y 1 A GLU 554 ? A GLU 16 17 1 Y 1 A ASN 555 ? A ASN 17 18 1 Y 1 A LEU 556 ? A LEU 18 19 1 Y 1 A TYR 557 ? A TYR 19 20 1 Y 1 A PHE 558 ? A PHE 20 21 1 Y 1 A GLN 559 ? A GLN 21 22 1 Y 1 A SER 560 ? A SER 22 23 1 Y 1 A MET 561 ? A MET 23 24 1 Y 1 A ARG 562 ? A ARG 24 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'NICKEL (II) ION' NI 3 '(2S)-2-hydroxybutanedioic acid' LMR 4 1,2-ETHANEDIOL EDO 5 water HOH #