HEADER UNKNOWN FUNCTION 23-MAY-15 5BMT TITLE CRYSTAL STRUCTURE OF AN UNCHARACTERIZED PROTEIN (PARMER_03598) FROM TITLE 2 PARABACTEROIDES MERDAE ATCC 43184 AT 1.50 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PARABACTEROIDES MERDAE ATCC 43184; SOURCE 3 ORGANISM_TAXID: 411477; SOURCE 4 GENE: PARMER_03598; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: PB1; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS IMMUNOGLOBULIN-LIKE FOLD, STRUCTURAL GENOMICS, JOINT CENTER FOR KEYWDS 2 STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI- KEYWDS 3 BIOLOGY, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 3 01-FEB-23 5BMT 1 SEQADV REVDAT 2 24-JAN-18 5BMT 1 SOURCE JRNL REMARK REVDAT 1 10-JUN-15 5BMT 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF AN UNCHARACTERIZED PROTEIN JRNL TITL 2 (PARMER_03598) FROM PARABACTEROIDES MERDAE ATCC 43184 AT JRNL TITL 3 1.50 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.2 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.21 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 91266 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.167 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.186 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 4569 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.54 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.95 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 6624 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.1999 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 6293 REMARK 3 BIN R VALUE (WORKING SET) : 0.1981 REMARK 3 BIN FREE R VALUE : 0.2351 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.00 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 331 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3529 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 86 REMARK 3 SOLVENT ATOMS : 697 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 18.88 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.21 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.56910 REMARK 3 B22 (A**2) : -0.73710 REMARK 3 B33 (A**2) : 0.16800 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.159 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.965 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.959 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 3961 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 5442 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1919 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 88 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 603 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 3961 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 547 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 5174 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.06 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 4.72 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 2.36 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: {A|28 - 259} REMARK 3 ORIGIN FOR THE GROUP (A): 34.3588 2.2539 30.0042 REMARK 3 T TENSOR REMARK 3 T11: -0.0338 T22: -0.0386 REMARK 3 T33: -0.0472 T12: -0.0097 REMARK 3 T13: 0.0163 T23: -0.0066 REMARK 3 L TENSOR REMARK 3 L11: 0.6961 L22: 0.8431 REMARK 3 L33: 0.5431 L12: 0.2085 REMARK 3 L13: 0.0156 L23: -0.0796 REMARK 3 S TENSOR REMARK 3 S11: -0.0437 S12: 0.0589 S13: 0.0275 REMARK 3 S21: 0.0050 S22: 0.0725 S23: 0.0158 REMARK 3 S31: -0.0106 S32: 0.0088 S33: -0.0289 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: {B|31 - 258} REMARK 3 ORIGIN FOR THE GROUP (A): 44.3509 -10.7644 12.2128 REMARK 3 T TENSOR REMARK 3 T11: -0.0370 T22: -0.0427 REMARK 3 T33: -0.0545 T12: -0.0120 REMARK 3 T13: 0.0082 T23: -0.0103 REMARK 3 L TENSOR REMARK 3 L11: 1.0464 L22: 0.6213 REMARK 3 L33: 0.7216 L12: 0.2287 REMARK 3 L13: 0.0725 L23: -0.0087 REMARK 3 S TENSOR REMARK 3 S11: 0.0923 S12: -0.0635 S13: -0.0079 REMARK 3 S21: 0.0216 S22: -0.0592 S23: -0.0181 REMARK 3 S31: 0.0106 S32: -0.0329 S33: -0.0331 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. A MET-INHIBITION PROTOCOL WAS USED REMARK 3 FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. REMARK 3 THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO REMARK 3 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. 2. THE SAD PHASES WERE USED AS RESTRAINTS DURING REMARK 3 REFINEMENT. 3. CAPS (CXS), CL, SO4 AND EDO MODELED WERE PRESENT REMARK 3 IN PROTEIN/CRYSTALLIZATION CONDITIONS. REMARK 4 REMARK 4 5BMT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-MAY-15. REMARK 100 THE DEPOSITION ID IS D_1000210141. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-DEC-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 10.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97951 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : VERTICAL FOCUSING MIRROR; DOUBLE REMARK 200 CRYSTAL SI(111) MONOCHROMATOR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE NOVEMBER 3, 2014 REMARK 200 BUILT=20141118 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 91355 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 29.212 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 3.796 REMARK 200 R MERGE (I) : 0.05900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.1200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.55 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.80000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELX, SHARP, SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.16 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.68 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M LITHIUM SULFATE, 2.0M AMMONIUM REMARK 280 SULFATE, 0.1M CAPS PH 10.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.87500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 82.73100 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 29.48450 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 82.73100 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.87500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 29.48450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 ASP A 24 REMARK 465 GLY A 25 REMARK 465 GLY A 26 REMARK 465 GLY A 27 REMARK 465 THR A 260 REMARK 465 ASN A 261 REMARK 465 GLY B 0 REMARK 465 ASP B 24 REMARK 465 GLY B 25 REMARK 465 GLY B 26 REMARK 465 GLY B 27 REMARK 465 ASN B 28 REMARK 465 THR B 29 REMARK 465 GLN B 30 REMARK 465 ALA B 259 REMARK 465 THR B 260 REMARK 465 ASN B 261 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 28 CG OD1 ND2 REMARK 470 GLU B 258 C O CB CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 129 50.45 -162.91 REMARK 500 SER A 129 48.00 -161.75 REMARK 500 SER A 129 49.53 -162.42 REMARK 500 SER B 113 79.06 -110.87 REMARK 500 SER B 113 78.89 -112.02 REMARK 500 SER B 129 43.20 -163.83 REMARK 500 SER B 129 48.83 -166.33 REMARK 500 SER B 129 49.12 -166.40 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 736 DISTANCE = 5.91 ANGSTROMS REMARK 525 HOH B 737 DISTANCE = 6.05 ANGSTROMS REMARK 525 HOH B 738 DISTANCE = 6.19 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CXS A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CXS B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CXS B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CXS B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 307 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: JCSG-418198 RELATED DB: TARGETTRACK REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT (24-261) WAS EXPRESSED WITH A PURIFICATION TAG REMARK 999 MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING REMARK 999 ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. DBREF 5BMT A 24 261 UNP A7AJI6 A7AJI6_9PORP 24 261 DBREF 5BMT B 24 261 UNP A7AJI6 A7AJI6_9PORP 24 261 SEQADV 5BMT GLY A 0 UNP A7AJI6 EXPRESSION TAG SEQADV 5BMT GLY B 0 UNP A7AJI6 EXPRESSION TAG SEQRES 1 A 239 GLY ASP GLY GLY GLY ASN THR GLN GLN LEU SER SER TYR SEQRES 2 A 239 ALA ILE VAL ASP TYR SER SER THR MSE ARG THR LEU ILE SEQRES 3 A 239 TYR PRO LEU GLY TYR TYR PRO LEU TYR VAL ALA THR ILE SEQRES 4 A 239 ALA ASN ASP PRO THR TYR ARG ALA GLY ASP CYS VAL LEU SEQRES 5 A 239 ALA ASN PHE THR VAL ASP PHE ASP SER ALA ASP ASN ALA SEQRES 6 A 239 ASN ALA SER THR ASN GLY PHE TYR VAL ALA THR GLY ALA SEQRES 7 A 239 ALA SER SER PRO LEU ALA LYS TYR ASP LEU SER TYR SER SEQRES 8 A 239 PRO LEU ASP SER MSE ALA LEU ASP ASN GLU LEU LEU LEU SEQRES 9 A 239 SER GLY SER GLU SER ALA LEU LEU PHE SER ASN ASN TYR SEQRES 10 A 239 LYS ARG ILE VAL VAL ILE PRO THR PHE THR SER VAL LEU SEQRES 11 A 239 THR ASP GLN LYS ASN THR TYR ILE MSE SER MSE ASP SER SEQRES 12 A 239 ASN GLN GLU PRO GLU THR VAL ASP GLY THR ASP ARG VAL SEQRES 13 A 239 TYR THR LEU CYS LEU ARG ALA GLN LYS ARG GLU GLU GLY SEQRES 14 A 239 LYS ALA PRO THR ILE SER ASN ALA MSE ASP PRO ILE ALA SEQRES 15 A 239 VAL GLU GLY GLY THR LEU TYR SER MSE LEU LYS GLY LYS SEQRES 16 A 239 GLU SER ALA ALA GLY LYS LYS ILE VAL SER TYR ARG VAL SEQRES 17 A 239 LYS TYR PRO LEU THR PHE ASN ALA ASP SER THR LYS ILE SEQRES 18 A 239 ALA THR TRP GLY TYR SER LYS ILE SER GLN PHE SER ILE SEQRES 19 A 239 GLU GLU ALA THR ASN SEQRES 1 B 239 GLY ASP GLY GLY GLY ASN THR GLN GLN LEU SER SER TYR SEQRES 2 B 239 ALA ILE VAL ASP TYR SER SER THR MSE ARG THR LEU ILE SEQRES 3 B 239 TYR PRO LEU GLY TYR TYR PRO LEU TYR VAL ALA THR ILE SEQRES 4 B 239 ALA ASN ASP PRO THR TYR ARG ALA GLY ASP CYS VAL LEU SEQRES 5 B 239 ALA ASN PHE THR VAL ASP PHE ASP SER ALA ASP ASN ALA SEQRES 6 B 239 ASN ALA SER THR ASN GLY PHE TYR VAL ALA THR GLY ALA SEQRES 7 B 239 ALA SER SER PRO LEU ALA LYS TYR ASP LEU SER TYR SER SEQRES 8 B 239 PRO LEU ASP SER MSE ALA LEU ASP ASN GLU LEU LEU LEU SEQRES 9 B 239 SER GLY SER GLU SER ALA LEU LEU PHE SER ASN ASN TYR SEQRES 10 B 239 LYS ARG ILE VAL VAL ILE PRO THR PHE THR SER VAL LEU SEQRES 11 B 239 THR ASP GLN LYS ASN THR TYR ILE MSE SER MSE ASP SER SEQRES 12 B 239 ASN GLN GLU PRO GLU THR VAL ASP GLY THR ASP ARG VAL SEQRES 13 B 239 TYR THR LEU CYS LEU ARG ALA GLN LYS ARG GLU GLU GLY SEQRES 14 B 239 LYS ALA PRO THR ILE SER ASN ALA MSE ASP PRO ILE ALA SEQRES 15 B 239 VAL GLU GLY GLY THR LEU TYR SER MSE LEU LYS GLY LYS SEQRES 16 B 239 GLU SER ALA ALA GLY LYS LYS ILE VAL SER TYR ARG VAL SEQRES 17 B 239 LYS TYR PRO LEU THR PHE ASN ALA ASP SER THR LYS ILE SEQRES 18 B 239 ALA THR TRP GLY TYR SER LYS ILE SER GLN PHE SER ILE SEQRES 19 B 239 GLU GLU ALA THR ASN MODRES 5BMT MSE A 44 MET MODIFIED RESIDUE MODRES 5BMT MSE A 118 MET MODIFIED RESIDUE MODRES 5BMT MSE A 161 MET MODIFIED RESIDUE MODRES 5BMT MSE A 163 MET MODIFIED RESIDUE MODRES 5BMT MSE A 200 MET MODIFIED RESIDUE MODRES 5BMT MSE A 213 MET MODIFIED RESIDUE MODRES 5BMT MSE B 44 MET MODIFIED RESIDUE MODRES 5BMT MSE B 118 MET MODIFIED RESIDUE MODRES 5BMT MSE B 161 MET MODIFIED RESIDUE MODRES 5BMT MSE B 163 MET MODIFIED RESIDUE MODRES 5BMT MSE B 200 MET MODIFIED RESIDUE MODRES 5BMT MSE B 213 MET MODIFIED RESIDUE HET MSE A 44 8 HET MSE A 118 8 HET MSE A 161 13 HET MSE A 163 16 HET MSE A 200 13 HET MSE A 213 13 HET MSE B 44 8 HET MSE B 118 8 HET MSE B 161 13 HET MSE B 163 8 HET MSE B 200 8 HET MSE B 213 8 HET SO4 A 301 5 HET SO4 A 302 5 HET CXS A 303 28 HET EDO A 304 8 HET EDO A 305 4 HET CL A 306 1 HET SO4 B 301 5 HET CXS B 302 28 HET CXS B 303 28 HET CXS B 304 14 HET EDO B 305 4 HET CL B 306 1 HET CL B 307 1 HETNAM MSE SELENOMETHIONINE HETNAM SO4 SULFATE ION HETNAM CXS 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID HETNAM EDO 1,2-ETHANEDIOL HETNAM CL CHLORIDE ION HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 12(C5 H11 N O2 SE) FORMUL 3 SO4 3(O4 S 2-) FORMUL 5 CXS 4(C9 H19 N O3 S) FORMUL 6 EDO 3(C2 H6 O2) FORMUL 8 CL 3(CL 1-) FORMUL 16 HOH *697(H2 O) HELIX 1 AA1 VAL A 58 ASN A 63 1 6 HELIX 2 AA2 SER A 83 ALA A 87 5 5 HELIX 3 AA3 ASN A 88 GLY A 93 1 6 HELIX 4 AA4 GLY A 207 ALA A 221 1 15 HELIX 5 AA5 VAL B 58 ASN B 63 1 6 HELIX 6 AA6 SER B 83 ALA B 87 5 5 HELIX 7 AA7 ASN B 88 GLY B 93 1 6 HELIX 8 AA8 GLY B 207 ALA B 221 1 15 SHEET 1 AA1 6 LEU A 32 TYR A 40 0 SHEET 2 AA1 6 THR A 46 PRO A 50 -1 O LEU A 47 N ASP A 39 SHEET 3 AA1 6 LEU A 56 TYR A 57 -1 O LEU A 56 N ILE A 48 SHEET 4 AA1 6 TYR A 95 ALA A 101 1 O ALA A 97 N TYR A 57 SHEET 5 AA1 6 CYS A 72 VAL A 79 -1 N ASN A 76 O ALA A 100 SHEET 6 AA1 6 LEU A 32 TYR A 40 -1 N SER A 34 O ALA A 75 SHEET 1 AA2 4 LYS A 107 TYR A 108 0 SHEET 2 AA2 4 ILE A 203 GLU A 206 1 O GLU A 206 N TYR A 108 SHEET 3 AA2 4 LYS A 140 THR A 153 -1 N ILE A 142 O VAL A 205 SHEET 4 AA2 4 GLY A 128 PHE A 135 -1 N LEU A 134 O ARG A 141 SHEET 1 AA3 4 LYS A 107 TYR A 108 0 SHEET 2 AA3 4 ILE A 203 GLU A 206 1 O GLU A 206 N TYR A 108 SHEET 3 AA3 4 LYS A 140 THR A 153 -1 N ILE A 142 O VAL A 205 SHEET 4 AA3 4 LYS A 192 MSE A 200 -1 O LYS A 192 N THR A 153 SHEET 1 AA4 4 LEU A 110 SER A 111 0 SHEET 2 AA4 4 LYS A 156 SER A 162 1 O MSE A 161 N SER A 111 SHEET 3 AA4 4 THR A 175 GLU A 189 -1 O ARG A 188 N LYS A 156 SHEET 4 AA4 4 GLU A 170 VAL A 172 -1 N GLU A 170 O VAL A 178 SHEET 1 AA5 6 GLU A 123 LEU A 124 0 SHEET 2 AA5 6 THR A 175 GLU A 189 -1 O ALA A 185 N LEU A 124 SHEET 3 AA5 6 ILE A 225 PHE A 236 1 O LYS A 231 N LEU A 181 SHEET 4 AA5 6 SER A 252 SER A 255 -1 O SER A 252 N TYR A 228 SHEET 5 AA5 6 ILE A 225 PHE A 236 -1 N TYR A 228 O SER A 252 SHEET 6 AA5 6 ILE A 243 TYR A 248 -1 O GLY A 247 N TYR A 232 SHEET 1 AA6 6 LEU B 32 TYR B 40 0 SHEET 2 AA6 6 THR B 46 PRO B 50 -1 O LEU B 47 N ASP B 39 SHEET 3 AA6 6 LEU B 56 TYR B 57 -1 O LEU B 56 N ILE B 48 SHEET 4 AA6 6 TYR B 95 ALA B 101 1 O ALA B 97 N TYR B 57 SHEET 5 AA6 6 CYS B 72 VAL B 79 -1 N ASN B 76 O ALA B 100 SHEET 6 AA6 6 LEU B 32 TYR B 40 -1 N SER B 34 O ALA B 75 SHEET 1 AA7 4 ALA B 106 TYR B 108 0 SHEET 2 AA7 4 ILE B 203 GLU B 206 1 O ALA B 204 N ALA B 106 SHEET 3 AA7 4 LYS B 140 THR B 153 -1 N ILE B 142 O VAL B 205 SHEET 4 AA7 4 GLY B 128 PHE B 135 -1 N LEU B 134 O ARG B 141 SHEET 1 AA8 4 ALA B 106 TYR B 108 0 SHEET 2 AA8 4 ILE B 203 GLU B 206 1 O ALA B 204 N ALA B 106 SHEET 3 AA8 4 LYS B 140 THR B 153 -1 N ILE B 142 O VAL B 205 SHEET 4 AA8 4 LYS B 192 MSE B 200 -1 O ILE B 196 N VAL B 151 SHEET 1 AA9 4 LEU B 110 SER B 111 0 SHEET 2 AA9 4 LYS B 156 SER B 162 1 O MSE B 161 N SER B 111 SHEET 3 AA9 4 THR B 175 GLU B 189 -1 O ARG B 188 N LYS B 156 SHEET 4 AA9 4 GLU B 170 VAL B 172 -1 N GLU B 170 O VAL B 178 SHEET 1 AB1 6 GLU B 123 LEU B 124 0 SHEET 2 AB1 6 THR B 175 GLU B 189 -1 O ALA B 185 N LEU B 124 SHEET 3 AB1 6 ILE B 225 PHE B 236 1 O LYS B 231 N LEU B 181 SHEET 4 AB1 6 SER B 252 SER B 255 -1 O SER B 252 N TYR B 228 SHEET 5 AB1 6 ILE B 225 PHE B 236 -1 N TYR B 228 O SER B 252 SHEET 6 AB1 6 ILE B 243 TYR B 248 -1 O GLY B 247 N TYR B 232 LINK C THR A 43 N MSE A 44 1555 1555 1.34 LINK C MSE A 44 N ARG A 45 1555 1555 1.33 LINK C SER A 117 N MSE A 118 1555 1555 1.35 LINK C MSE A 118 N ALA A 119 1555 1555 1.35 LINK C ILE A 160 N MSE A 161 1555 1555 1.33 LINK C MSE A 161 N SER A 162 1555 1555 1.33 LINK C SER A 162 N AMSE A 163 1555 1555 1.31 LINK C SER A 162 N BMSE A 163 1555 1555 1.36 LINK C AMSE A 163 N AASP A 164 1555 1555 1.33 LINK C BMSE A 163 N BASP A 164 1555 1555 1.34 LINK C ALA A 199 N MSE A 200 1555 1555 1.33 LINK C MSE A 200 N ASP A 201 1555 1555 1.33 LINK C SER A 212 N MSE A 213 1555 1555 1.36 LINK C MSE A 213 N LEU A 214 1555 1555 1.34 LINK C THR B 43 N MSE B 44 1555 1555 1.35 LINK C MSE B 44 N ARG B 45 1555 1555 1.34 LINK C SER B 117 N MSE B 118 1555 1555 1.35 LINK C MSE B 118 N ALA B 119 1555 1555 1.34 LINK C ILE B 160 N MSE B 161 1555 1555 1.33 LINK C MSE B 161 N SER B 162 1555 1555 1.34 LINK C SER B 162 N MSE B 163 1555 1555 1.33 LINK C MSE B 163 N ASP B 164 1555 1555 1.34 LINK C ALA B 199 N MSE B 200 1555 1555 1.34 LINK C MSE B 200 N ASP B 201 1555 1555 1.35 LINK C SER B 212 N MSE B 213 1555 1555 1.35 LINK C MSE B 213 N LEU B 214 1555 1555 1.33 CISPEP 1 ALA A 193 PRO A 194 0 4.70 CISPEP 2 ALA B 193 PRO B 194 0 4.48 SITE 1 AC1 7 THR A 43 ARG A 45 PHE A 94 ARG A 188 SITE 2 AC1 7 HOH A 429 HOH A 498 HOH A 635 SITE 1 AC2 4 SER A 212 LYS A 215 GLU A 258 HOH A 501 SITE 1 AC3 15 SER A 33 SER A 34 TYR A 35 ILE A 145 SITE 2 AC3 15 HOH A 405 HOH A 423 HOH A 481 HOH A 494 SITE 3 AC3 15 HOH A 566 HOH A 574 LEU B 51 SER B 131 SITE 4 AC3 15 VAL B 143 ILE B 145 CXS B 302 SITE 1 AC4 9 THR A 46 ILE A 61 ALA A 62 ASP A 64 SITE 2 AC4 9 TYR A 67 ARG A 68 SER A 111 TYR A 112 SITE 3 AC4 9 SER A 113 SITE 1 AC5 2 PRO A 194 THR A 195 SITE 1 AC6 3 SER A 102 SER A 103 HOH A 743 SITE 1 AC7 5 THR B 43 ARG B 45 PHE B 94 HOH B 403 SITE 2 AC7 5 HOH B 413 SITE 1 AC8 10 TYR A 35 SER A 131 VAL A 143 CXS A 303 SITE 2 AC8 10 TYR B 35 ILE B 145 MSE B 200 HOH B 491 SITE 3 AC8 10 HOH B 586 HOH B 626 SITE 1 AC9 12 TYR A 54 ALA A 89 GLY A 93 PHE A 94 SITE 2 AC9 12 TYR A 95 VAL B 79 ASP B 80 PHE B 81 SITE 3 AC9 12 HOH B 485 HOH B 563 HOH B 611 HOH B 721 SITE 1 AD1 7 LYS A 250 GLN B 155 ASN B 157 MSE B 200 SITE 2 AD1 7 ASP B 201 HOH B 447 HOH B 622 SITE 1 AD2 5 ASN B 138 HOH B 478 HOH B 492 HOH B 496 SITE 2 AD2 5 HOH B 557 SITE 1 AD3 3 THR B 245 TRP B 246 HOH B 449 SITE 1 AD4 4 ALA B 106 LYS B 107 HOH B 545 HOH B 724 CRYST1 57.750 58.969 165.462 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017316 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016958 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006044 0.00000