data_5BNG # _entry.id 5BNG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5BNG WWPDB D_1000210210 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5BNG _pdbx_database_status.recvd_initial_deposition_date 2015-05-26 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Morgunova, E.' 1 'Jolma, A.' 2 'Yin, Y.' 3 'Nitta, K.' 4 'Dave, K.' 5 'Popov, A.' 6 'Taipale, M.' 7 'Enge, M.' 8 'Kivioja, T.' 9 'Taipale, J.' 10 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Nature _citation.journal_id_ASTM NATUAS _citation.journal_id_CSD 0006 _citation.journal_id_ISSN 1476-4687 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 527 _citation.language ? _citation.page_first 384 _citation.page_last 388 _citation.title 'DNA-dependent formation of transcription factor pairs alters their binding specificity.' _citation.year 2015 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/nature15518 _citation.pdbx_database_id_PubMed 26550823 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Jolma, A.' 1 primary 'Yin, Y.' 2 primary 'Nitta, K.R.' 3 primary 'Dave, K.' 4 primary 'Popov, A.' 5 primary 'Taipale, M.' 6 primary 'Enge, M.' 7 primary 'Kivioja, T.' 8 primary 'Morgunova, E.' 9 primary 'Taipale, J.' 10 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 5BNG _cell.details ? _cell.formula_units_Z ? _cell.length_a 45.900 _cell.length_a_esd ? _cell.length_b 59.940 _cell.length_b_esd ? _cell.length_c 107.940 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5BNG _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Homeobox protein Meis2' 7129.208 2 ? ? 'residues 283-342' ? 2 polymer syn ;DNA (5'-D(P*TP*TP*AP*GP*CP*TP*GP*TP*CP*A)-3') ; 3035.003 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(P*TP*GP*AP*CP*AP*GP*CP*TP*AP*A-3') ; 3671.418 1 ? ? ? ? 4 polymer syn ;DNA (5'-D(P*AP*AP*TP*TP*AP*GP*CP*TP*GP*TP*CP*A)-3') ; 3677.415 1 ? ? ? ? 5 polymer syn ;DNA (5'-D(P*TP*GP*AP*CP*AP*GP*CP*TP*AP*A)-3') ; 3053.031 1 ? ? ? ? 6 water nat water 18.015 33 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Meis1-related protein 1' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no FPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQS FPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQS B,A ? 2 polydeoxyribonucleotide no no '(DT)(DT)(DA)(DG)(DC)(DT)(DG)(DT)(DC)(DA)' TTAGCTGTCA L ? 3 polydeoxyribonucleotide no no '(DT)(DG)(DA)(DC)(DA)(DG)(DC)(DT)(DA)(DA)(DC)(DG)' TGACAGCTAACG M ? 4 polydeoxyribonucleotide no no '(DG)(DA)(DT)(DT)(DA)(DG)(DC)(DT)(DG)(DT)(DC)(DA)' GATTAGCTGTCA C ? 5 polydeoxyribonucleotide no no '(DT)(DG)(DA)(DC)(DA)(DG)(DC)(DT)(DA)(DA)' TGACAGCTAA D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PHE n 1 2 PRO n 1 3 LYS n 1 4 VAL n 1 5 ALA n 1 6 THR n 1 7 ASN n 1 8 ILE n 1 9 MET n 1 10 ARG n 1 11 ALA n 1 12 TRP n 1 13 LEU n 1 14 PHE n 1 15 GLN n 1 16 HIS n 1 17 LEU n 1 18 THR n 1 19 HIS n 1 20 PRO n 1 21 TYR n 1 22 PRO n 1 23 SER n 1 24 GLU n 1 25 GLU n 1 26 GLN n 1 27 LYS n 1 28 LYS n 1 29 GLN n 1 30 LEU n 1 31 ALA n 1 32 GLN n 1 33 ASP n 1 34 THR n 1 35 GLY n 1 36 LEU n 1 37 THR n 1 38 ILE n 1 39 LEU n 1 40 GLN n 1 41 VAL n 1 42 ASN n 1 43 ASN n 1 44 TRP n 1 45 PHE n 1 46 ILE n 1 47 ASN n 1 48 ALA n 1 49 ARG n 1 50 ARG n 1 51 ARG n 1 52 ILE n 1 53 VAL n 1 54 GLN n 1 55 PRO n 1 56 MET n 1 57 ILE n 1 58 ASP n 1 59 GLN n 1 60 SER n 2 1 DT n 2 2 DT n 2 3 DA n 2 4 DG n 2 5 DC n 2 6 DT n 2 7 DG n 2 8 DT n 2 9 DC n 2 10 DA n 3 1 DT n 3 2 DG n 3 3 DA n 3 4 DC n 3 5 DA n 3 6 DG n 3 7 DC n 3 8 DT n 3 9 DA n 3 10 DA n 3 11 DC n 3 12 DG n 4 1 DG n 4 2 DA n 4 3 DT n 4 4 DT n 4 5 DA n 4 6 DG n 4 7 DC n 4 8 DT n 4 9 DG n 4 10 DT n 4 11 DC n 4 12 DA n 5 1 DT n 5 2 DG n 5 3 DA n 5 4 DC n 5 5 DA n 5 6 DG n 5 7 DC n 5 8 DT n 5 9 DA n 5 10 DA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 60 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'MEIS2, MRG1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant pLysS _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PETG20A _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 10 'Homo sapiens' ? 9606 ? 3 1 sample 1 12 'Homo sapiens' ? 9606 ? 4 1 sample 1 12 'Homo sapiens' ? 9606 ? 5 1 sample 1 10 'Homo sapiens' ? 9606 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP MEIS2_HUMAN O14770 O14770-4 1 FPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQS 283 2 PDB 5BNG 5BNG ? 2 ? 1 3 PDB 5BNG 5BNG ? 3 ? 1 4 PDB 5BNG 5BNG ? 4 ? 1 5 PDB 5BNG 5BNG ? 5 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5BNG B 1 ? 60 ? O14770 283 ? 342 ? 5 64 2 2 5BNG L 1 ? 10 ? 5BNG 26 ? 35 ? 26 35 3 3 5BNG M 1 ? 12 ? 5BNG 4 ? 16 ? 4 16 4 1 5BNG A 1 ? 60 ? O14770 283 ? 342 ? 5 64 5 4 5BNG C 1 ? 12 ? 5BNG 24 ? 35 ? 24 35 6 5 5BNG D 1 ? 10 ? 5BNG 4 ? 13 ? 4 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5BNG _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.75 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 55.23 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.09 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'PEG 4000, magnesium chloride, PEG 400, HEPES' _exptl_crystal_grow.pdbx_pH_range 7-7.5 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'PSI PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2014-03-09 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.006370 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ESRF BEAMLINE ID29' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.006370 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ID29 _diffrn_source.pdbx_synchrotron_site ESRF # _reflns.B_iso_Wilson_estimate 56 _reflns.entry_id 5BNG _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 3.23 _reflns.d_resolution_low 42 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all 10268 _reflns.number_obs 9233 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.0 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 1.1 _reflns.pdbx_Rmerge_I_obs 0.34 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 6.9 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 3.23 _reflns_shell.d_res_low 3.35 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.3 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs 1006 _reflns_shell.number_possible ? _reflns_shell.number_unique_all 930 _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 100 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 9.5 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 312.520 _refine.B_iso_mean 88.2163 _refine.B_iso_min 0.000 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5BNG _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 3.5000 _refine.ls_d_res_low 19.9190 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 7190 _refine.ls_number_reflns_R_free 302 _refine.ls_number_reflns_R_work 6888 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.7400 _refine.ls_percent_reflns_R_free 4.2000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.3451 _refine.ls_R_factor_R_free 0.3881 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.3433 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.410 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 44.9100 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.6500 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 3.5000 _refine_hist.d_res_low 19.9190 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 34 _refine_hist.number_atoms_total 1931 _refine_hist.pdbx_number_residues_total 163 _refine_hist.pdbx_B_iso_mean_solvent 19.69 _refine_hist.pdbx_number_atoms_protein 993 _refine_hist.pdbx_number_atoms_nucleic_acid 904 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.004 ? 2026 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.727 ? 2922 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.036 ? 327 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.003 ? 221 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 24.063 ? 807 ? f_dihedral_angle_d ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 3.5002 _refine_ls_shell.d_res_low 4.4021 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 155 _refine_ls_shell.number_reflns_R_work 3453 _refine_ls_shell.percent_reflns_obs 100.0000 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.4032 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.3462 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 5BNG _struct.title 'monomer of TALE type homeobox transcription factor MEIS1 complexes with specific DNA' _struct.pdbx_descriptor 'Homeobox protein Meis2/DNA Complex' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 5BNG _struct_keywords.text 'Protein-DNA complex, transcription factor, TALE type homeobox protein' _struct_keywords.pdbx_keywords PROTEIN/DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 1 ? E N N 4 ? F N N 5 ? G N N 6 ? H N N 6 ? I N N 6 ? J N N 6 ? K N N 6 ? L N N 6 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 PRO A 2 ? GLN A 15 ? PRO B 6 GLN B 19 1 ? 14 HELX_P HELX_P2 AA2 SER A 23 ? GLY A 35 ? SER B 27 GLY B 39 1 ? 13 HELX_P HELX_P3 AA3 THR A 37 ? ILE A 52 ? THR B 41 ILE B 56 1 ? 16 HELX_P HELX_P4 AA4 ILE A 52 ? SER A 60 ? ILE B 56 SER B 64 1 ? 9 HELX_P HELX_P5 AA5 VAL D 4 ? PHE D 14 ? VAL A 8 PHE A 18 1 ? 11 HELX_P HELX_P6 AA6 GLN D 15 ? LEU D 17 ? GLN A 19 LEU A 21 5 ? 3 HELX_P HELX_P7 AA7 GLU D 24 ? LEU D 30 ? GLU A 28 LEU A 34 1 ? 7 HELX_P HELX_P8 AA8 THR D 37 ? VAL D 53 ? THR A 41 VAL A 57 1 ? 17 HELX_P HELX_P9 AA9 VAL D 53 ? GLN D 59 ? VAL A 57 GLN A 63 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order hydrog1 hydrog ? ? E DT 3 N3 ? ? ? 1_555 F DA 10 N1 ? ? C DT 26 D DA 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog2 hydrog ? ? E DT 3 O4 ? ? ? 1_555 F DA 10 N6 ? ? C DT 26 D DA 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog3 hydrog ? ? E DT 4 N3 ? ? ? 1_555 F DA 9 N1 ? ? C DT 27 D DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog4 hydrog ? ? E DT 4 O4 ? ? ? 1_555 F DA 9 N6 ? ? C DT 27 D DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog5 hydrog ? ? E DG 6 N1 ? ? ? 1_555 F DC 7 N3 ? ? C DG 29 D DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog6 hydrog ? ? E DG 6 N2 ? ? ? 1_555 F DC 7 O2 ? ? C DG 29 D DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog7 hydrog ? ? E DG 6 O6 ? ? ? 1_555 F DC 7 N4 ? ? C DG 29 D DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog8 hydrog ? ? E DC 7 N3 ? ? ? 1_555 F DG 6 N1 ? ? C DC 30 D DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog9 hydrog ? ? E DC 7 N4 ? ? ? 1_555 F DG 6 O6 ? ? C DC 30 D DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog10 hydrog ? ? E DC 7 O2 ? ? ? 1_555 F DG 6 N2 ? ? C DC 30 D DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog11 hydrog ? ? E DT 8 O4 ? ? ? 1_555 F DC 4 N4 ? ? C DT 31 D DC 7 1_555 ? ? ? ? ? ? 'DT-DC MISPAIR' ? ? hydrog12 hydrog ? ? E DT 8 N3 ? ? ? 1_555 F DA 5 N1 ? ? C DT 31 D DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog13 hydrog ? ? E DT 8 O4 ? ? ? 1_555 F DA 5 N6 ? ? C DT 31 D DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog14 hydrog ? ? E DG 9 N1 ? ? ? 1_555 F DC 4 N3 ? ? C DG 32 D DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog15 hydrog ? ? E DG 9 N2 ? ? ? 1_555 F DC 4 O2 ? ? C DG 32 D DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog16 hydrog ? ? E DG 9 O6 ? ? ? 1_555 F DC 4 N4 ? ? C DG 32 D DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog17 hydrog ? ? E DC 11 N3 ? ? ? 1_555 F DG 2 N1 ? ? C DC 34 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog18 hydrog ? ? E DC 11 N4 ? ? ? 1_555 F DG 2 O6 ? ? C DC 34 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog19 hydrog ? ? E DC 11 O2 ? ? ? 1_555 F DG 2 N2 ? ? C DC 34 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog20 hydrog ? ? E DA 12 N1 ? ? ? 1_555 F DT 1 N3 ? ? C DA 35 D DT 4 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? hydrog21 hydrog ? ? B DT 1 O4 ? ? ? 1_555 C DA 9 N6 ? ? L DT 26 M DA 12 1_555 ? ? ? ? ? ? 'DT-DA PAIR' ? ? hydrog22 hydrog ? ? B DT 2 N3 ? ? ? 1_555 C DA 9 N1 ? ? L DT 27 M DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog23 hydrog ? ? B DT 2 O4 ? ? ? 1_555 C DA 9 N6 ? ? L DT 27 M DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog24 hydrog ? ? B DA 3 N1 ? ? ? 1_555 C DT 8 N3 ? ? L DA 28 M DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog25 hydrog ? ? B DA 3 N6 ? ? ? 1_555 C DT 8 O4 ? ? L DA 28 M DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog26 hydrog ? ? B DG 4 N2 ? ? ? 1_555 C DC 7 O2 ? ? L DG 29 M DC 10 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? hydrog27 hydrog ? ? B DC 5 N3 ? ? ? 1_555 C DG 6 N1 ? ? L DC 30 M DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog28 hydrog ? ? B DC 5 N4 ? ? ? 1_555 C DG 6 O6 ? ? L DC 30 M DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog29 hydrog ? ? B DC 5 O2 ? ? ? 1_555 C DG 6 N2 ? ? L DC 30 M DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog30 hydrog ? ? B DT 6 N3 ? ? ? 1_555 C DA 5 N1 ? ? L DT 31 M DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog31 hydrog ? ? B DT 6 O4 ? ? ? 1_555 C DA 5 N6 ? ? L DT 31 M DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog32 hydrog ? ? B DG 7 N1 ? ? ? 1_555 C DA 3 N1 ? ? L DG 32 M DA 6 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? hydrog33 hydrog ? ? B DG 7 O6 ? ? ? 1_555 C DA 3 N6 ? ? L DG 32 M DA 6 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? hydrog34 hydrog ? ? B DG 7 N2 ? ? ? 1_555 C DC 4 O2 ? ? L DG 32 M DC 7 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? hydrog35 hydrog ? ? B DT 8 N3 ? ? ? 1_555 C DA 3 N1 ? ? L DT 33 M DA 6 1_555 ? ? ? ? ? ? 'DT-DA PAIR' ? ? hydrog36 hydrog ? ? B DC 9 N3 ? ? ? 1_555 C DG 2 N1 ? ? L DC 34 M DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog37 hydrog ? ? B DC 9 N4 ? ? ? 1_555 C DG 2 O6 ? ? L DC 34 M DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog38 hydrog ? ? B DC 9 O2 ? ? ? 1_555 C DG 2 N2 ? ? L DC 34 M DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog39 hydrog ? ? B DA 10 N1 ? ? ? 1_555 C DT 1 N3 ? ? L DA 35 M DT 4 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ALA 31 D . ? ALA 35 A GLN 32 D ? GLN 36 A 1 5.16 2 LEU 36 D . ? LEU 40 A THR 37 D ? THR 41 A 1 16.89 # _atom_sites.entry_id 5BNG _atom_sites.fract_transf_matrix[1][1] 0.021786 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016683 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009264 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C H N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PHE 1 5 5 PHE PHE B . n A 1 2 PRO 2 6 6 PRO PRO B . n A 1 3 LYS 3 7 7 LYS LYS B . n A 1 4 VAL 4 8 8 VAL VAL B . n A 1 5 ALA 5 9 9 ALA ALA B . n A 1 6 THR 6 10 10 THR THR B . n A 1 7 ASN 7 11 11 ASN ASN B . n A 1 8 ILE 8 12 12 ILE ILE B . n A 1 9 MET 9 13 13 MET MET B . n A 1 10 ARG 10 14 14 ARG ARG B . n A 1 11 ALA 11 15 15 ALA ALA B . n A 1 12 TRP 12 16 16 TRP TRP B . n A 1 13 LEU 13 17 17 LEU LEU B . n A 1 14 PHE 14 18 18 PHE PHE B . n A 1 15 GLN 15 19 19 GLN GLN B . n A 1 16 HIS 16 20 20 HIS HIS B . n A 1 17 LEU 17 21 21 LEU LEU B . n A 1 18 THR 18 22 22 THR THR B . n A 1 19 HIS 19 23 23 HIS HIS B . n A 1 20 PRO 20 24 24 PRO PRO B . n A 1 21 TYR 21 25 25 TYR TYR B . n A 1 22 PRO 22 26 26 PRO PRO B . n A 1 23 SER 23 27 27 SER SER B . n A 1 24 GLU 24 28 28 GLU GLU B . n A 1 25 GLU 25 29 29 GLU GLU B . n A 1 26 GLN 26 30 30 GLN GLN B . n A 1 27 LYS 27 31 31 LYS LYS B . n A 1 28 LYS 28 32 32 LYS LYS B . n A 1 29 GLN 29 33 33 GLN GLN B . n A 1 30 LEU 30 34 34 LEU LEU B . n A 1 31 ALA 31 35 35 ALA ALA B . n A 1 32 GLN 32 36 36 GLN GLN B . n A 1 33 ASP 33 37 37 ASP ASP B . n A 1 34 THR 34 38 38 THR THR B . n A 1 35 GLY 35 39 39 GLY GLY B . n A 1 36 LEU 36 40 40 LEU LEU B . n A 1 37 THR 37 41 41 THR THR B . n A 1 38 ILE 38 42 42 ILE ILE B . n A 1 39 LEU 39 43 43 LEU LEU B . n A 1 40 GLN 40 44 44 GLN GLN B . n A 1 41 VAL 41 45 45 VAL VAL B . n A 1 42 ASN 42 46 46 ASN ASN B . n A 1 43 ASN 43 47 47 ASN ASN B . n A 1 44 TRP 44 48 48 TRP TRP B . n A 1 45 PHE 45 49 49 PHE PHE B . n A 1 46 ILE 46 50 50 ILE ILE B . n A 1 47 ASN 47 51 51 ASN ASN B . n A 1 48 ALA 48 52 52 ALA ALA B . n A 1 49 ARG 49 53 53 ARG ARG B . n A 1 50 ARG 50 54 54 ARG ARG B . n A 1 51 ARG 51 55 55 ARG ARG B . n A 1 52 ILE 52 56 56 ILE ILE B . n A 1 53 VAL 53 57 57 VAL VAL B . n A 1 54 GLN 54 58 58 GLN GLN B . n A 1 55 PRO 55 59 59 PRO PRO B . n A 1 56 MET 56 60 60 MET MET B . n A 1 57 ILE 57 61 61 ILE ILE B . n A 1 58 ASP 58 62 62 ASP ASP B . n A 1 59 GLN 59 63 63 GLN GLN B . n A 1 60 SER 60 64 64 SER SER B . n B 2 1 DT 1 26 26 DT DT L . n B 2 2 DT 2 27 27 DT DT L . n B 2 3 DA 3 28 28 DA DA L . n B 2 4 DG 4 29 29 DG DG L . n B 2 5 DC 5 30 30 DC DC L . n B 2 6 DT 6 31 31 DT DT L . n B 2 7 DG 7 32 32 DG DG L . n B 2 8 DT 8 33 33 DT DT L . n B 2 9 DC 9 34 34 DC DC L . n B 2 10 DA 10 35 35 DA DA L . n C 3 1 DT 1 4 4 DT DT M . n C 3 2 DG 2 5 5 DG DG M . n C 3 3 DA 3 6 6 DA DA M . n C 3 4 DC 4 7 7 DC DC M . n C 3 5 DA 5 8 8 DA DA M . n C 3 6 DG 6 9 9 DG DG M . n C 3 7 DC 7 10 10 DC DC M . n C 3 8 DT 8 11 11 DT DT M . n C 3 9 DA 9 12 12 DA DA M . n C 3 10 DA 10 13 13 DA DA M . n C 3 11 DC 11 15 15 DC DC M . n C 3 12 DG 12 16 16 DG DG M . n D 1 1 PHE 1 5 ? ? ? A . n D 1 2 PRO 2 6 6 PRO PRO A . n D 1 3 LYS 3 7 7 LYS LYS A . n D 1 4 VAL 4 8 8 VAL VAL A . n D 1 5 ALA 5 9 9 ALA ALA A . n D 1 6 THR 6 10 10 THR THR A . n D 1 7 ASN 7 11 11 ASN ASN A . n D 1 8 ILE 8 12 12 ILE ILE A . n D 1 9 MET 9 13 13 MET MET A . n D 1 10 ARG 10 14 14 ARG ARG A . n D 1 11 ALA 11 15 15 ALA ALA A . n D 1 12 TRP 12 16 16 TRP TRP A . n D 1 13 LEU 13 17 17 LEU LEU A . n D 1 14 PHE 14 18 18 PHE PHE A . n D 1 15 GLN 15 19 19 GLN GLN A . n D 1 16 HIS 16 20 20 HIS HIS A . n D 1 17 LEU 17 21 21 LEU LEU A . n D 1 18 THR 18 22 22 THR THR A . n D 1 19 HIS 19 23 23 HIS HIS A . n D 1 20 PRO 20 24 24 PRO PRO A . n D 1 21 TYR 21 25 25 TYR TYR A . n D 1 22 PRO 22 26 26 PRO PRO A . n D 1 23 SER 23 27 27 SER SER A . n D 1 24 GLU 24 28 28 GLU GLU A . n D 1 25 GLU 25 29 29 GLU GLU A . n D 1 26 GLN 26 30 30 GLN GLN A . n D 1 27 LYS 27 31 31 LYS LYS A . n D 1 28 LYS 28 32 32 LYS LYS A . n D 1 29 GLN 29 33 33 GLN GLN A . n D 1 30 LEU 30 34 34 LEU LEU A . n D 1 31 ALA 31 35 35 ALA ALA A . n D 1 32 GLN 32 36 36 GLN GLN A . n D 1 33 ASP 33 37 37 ASP ASP A . n D 1 34 THR 34 38 38 THR THR A . n D 1 35 GLY 35 39 39 GLY GLY A . n D 1 36 LEU 36 40 40 LEU LEU A . n D 1 37 THR 37 41 41 THR THR A . n D 1 38 ILE 38 42 42 ILE ILE A . n D 1 39 LEU 39 43 43 LEU LEU A . n D 1 40 GLN 40 44 44 GLN GLN A . n D 1 41 VAL 41 45 45 VAL VAL A . n D 1 42 ASN 42 46 46 ASN ASN A . n D 1 43 ASN 43 47 47 ASN ASN A . n D 1 44 TRP 44 48 48 TRP TRP A . n D 1 45 PHE 45 49 49 PHE PHE A . n D 1 46 ILE 46 50 50 ILE ILE A . n D 1 47 ASN 47 51 51 ASN ASN A . n D 1 48 ALA 48 52 52 ALA ALA A . n D 1 49 ARG 49 53 53 ARG ARG A . n D 1 50 ARG 50 54 54 ARG ARG A . n D 1 51 ARG 51 55 55 ARG ARG A . n D 1 52 ILE 52 56 56 ILE ILE A . n D 1 53 VAL 53 57 57 VAL VAL A . n D 1 54 GLN 54 58 58 GLN GLN A . n D 1 55 PRO 55 59 59 PRO PRO A . n D 1 56 MET 56 60 60 MET MET A . n D 1 57 ILE 57 61 61 ILE ILE A . n D 1 58 ASP 58 62 62 ASP ASP A . n D 1 59 GLN 59 63 63 GLN GLN A . n D 1 60 SER 60 64 64 SER SER A . n E 4 1 DG 1 24 24 DG DG C . n E 4 2 DA 2 25 25 DA DA C . n E 4 3 DT 3 26 26 DT DT C . n E 4 4 DT 4 27 27 DT DT C . n E 4 5 DA 5 28 28 DA DA C . n E 4 6 DG 6 29 29 DG DG C . n E 4 7 DC 7 30 30 DC DC C . n E 4 8 DT 8 31 31 DT DT C . n E 4 9 DG 9 32 32 DG DG C . n E 4 10 DT 10 33 33 DT DT C . n E 4 11 DC 11 34 34 DC DC C . n E 4 12 DA 12 35 35 DA DA C . n F 5 1 DT 1 4 4 DT DT D . n F 5 2 DG 2 5 5 DG DG D . n F 5 3 DA 3 6 6 DA DA D . n F 5 4 DC 4 7 7 DC DC D . n F 5 5 DA 5 8 8 DA DA D . n F 5 6 DG 6 9 9 DG DG D . n F 5 7 DC 7 10 10 DC DC D . n F 5 8 DT 8 11 11 DT DT D . n F 5 9 DA 9 12 12 DA DA D . n F 5 10 DA 10 13 13 DA DA D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code G 6 HOH 1 101 63 HOH HOH B . G 6 HOH 2 102 24 HOH HOH B . G 6 HOH 3 103 36 HOH HOH B . G 6 HOH 4 104 27 HOH HOH B . G 6 HOH 5 105 35 HOH HOH B . G 6 HOH 6 106 37 HOH HOH B . G 6 HOH 7 107 64 HOH HOH B . G 6 HOH 8 108 21 HOH HOH B . G 6 HOH 9 110 20 HOH HOH B . H 6 HOH 1 101 58 HOH HOH L . H 6 HOH 2 102 78 HOH HOH L . I 6 HOH 1 101 49 HOH HOH M . I 6 HOH 2 102 71 HOH HOH M . I 6 HOH 3 103 16 HOH HOH M . I 6 HOH 4 104 75 HOH HOH M . I 6 HOH 5 105 57 HOH HOH M . I 6 HOH 6 106 77 HOH HOH M . I 6 HOH 7 107 13 HOH HOH M . I 6 HOH 8 108 17 HOH HOH M . J 6 HOH 1 101 74 HOH HOH A . J 6 HOH 2 102 76 HOH HOH A . J 6 HOH 3 103 73 HOH HOH A . J 6 HOH 4 104 26 HOH HOH A . J 6 HOH 5 105 29 HOH HOH A . J 6 HOH 6 106 68 HOH HOH A . J 6 HOH 7 107 65 HOH HOH A . J 6 HOH 8 108 34 HOH HOH A . J 6 HOH 9 109 6 HOH HOH A . K 6 HOH 1 101 10 HOH HOH C . K 6 HOH 2 102 66 HOH HOH C . K 6 HOH 3 103 72 HOH HOH C . L 6 HOH 1 101 38 HOH HOH D . L 6 HOH 2 102 1 HOH HOH D . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 software_defined_assembly PISA trimeric 3 2 software_defined_assembly PISA trimeric 3 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,G,H,I 2 1 D,E,F,J,K,L # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2230 ? 1 MORE -13 ? 1 'SSA (A^2)' 7960 ? 2 'ABSA (A^2)' 2130 ? 2 MORE -12 ? 2 'SSA (A^2)' 7990 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-11-04 2 'Structure model' 1 1 2015-11-18 3 'Structure model' 1 2 2015-12-02 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined -4.7792 11.7004 6.2853 0.5081 ? 0.0019 ? -0.0723 ? 0.2111 ? -0.0627 ? 0.3263 ? 1.5181 ? -0.8288 ? 0.0415 ? 0.6699 ? 0.1217 ? 0.1253 ? -0.3678 ? -0.4227 ? -0.2138 ? -0.1626 ? 0.6565 ? 0.0800 ? -0.1493 ? 0.1063 ? 0.1923 ? 2 'X-RAY DIFFRACTION' ? refined -22.0355 42.5940 6.7413 0.4851 ? 0.0301 ? -0.1355 ? 0.6792 ? -0.0357 ? 0.6893 ? 2.0149 ? -0.0259 ? -0.1718 ? 1.7139 ? -0.8544 ? 0.9997 ? 0.0360 ? 1.3307 ? -0.5318 ? 0.3448 ? -0.0307 ? -0.1262 ? -0.1934 ? 0.1738 ? -0.0428 ? 3 'X-RAY DIFFRACTION' ? refined 2.4454 22.4079 15.3042 0.5153 ? 0.0412 ? -0.0728 ? 0.6669 ? -0.0515 ? 0.5003 ? 2.5952 ? -0.1583 ? 0.9119 ? 1.3379 ? 0.0940 ? 0.3107 ? -0.1198 ? 0.2697 ? 0.9974 ? -0.2111 ? -0.3328 ? 0.0377 ? 0.2999 ? 0.7241 ? -0.4903 ? 4 'X-RAY DIFFRACTION' ? refined 2.6484 22.0833 16.1472 0.9110 ? -0.1765 ? -0.0018 ? 1.3283 ? -0.3871 ? 1.2112 ? 0.1015 ? -0.2333 ? 0.1398 ? 0.4820 ? -0.2682 ? 0.1074 ? -0.1219 ? -0.2085 ? 1.8649 ? 0.8126 ? 0.5769 ? -1.1832 ? 0.5856 ? -0.5832 ? 0.0094 ? 5 'X-RAY DIFFRACTION' ? refined -11.0341 46.1383 16.5672 0.7026 ? 0.0601 ? -0.0549 ? 0.7697 ? 0.0318 ? 0.4281 ? 4.3426 ? -1.6865 ? -0.9816 ? 0.6305 ? 0.8049 ? 2.3150 ? 0.8927 ? -1.9384 ? 0.0825 ? 0.0364 ? 0.2548 ? -0.0796 ? -0.1131 ? -0.1169 ? 1.6924 ? 6 'X-RAY DIFFRACTION' ? refined -10.9388 45.6975 17.1356 1.1217 ? -0.5919 ? -0.0462 ? 1.2501 ? -0.0675 ? 0.6933 ? 1.8579 ? -1.0905 ? -0.3432 ? 0.8233 ? -0.0926 ? 0.5447 ? -0.3543 ? -1.5593 ? -0.2442 ? 0.6324 ? 0.0833 ? -0.4350 ? -0.0885 ? -0.4260 ? 0.0206 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? B 0 ? ? B 0 ? ;chain 'B' and (resid 5 through 64 ) ; 2 'X-RAY DIFFRACTION' 2 ? ? A 0 ? ? A 0 ? ;chain 'A' and (resid 6 through 64 ) ; 3 'X-RAY DIFFRACTION' 3 ? ? L 0 ? ? L 0 ? ;chain 'L' and (resid 26 through 35 ) ; 4 'X-RAY DIFFRACTION' 4 ? ? M 0 ? ? M 0 ? ;chain 'M' and (resid 4 through 13 ) ; 5 'X-RAY DIFFRACTION' 5 ? ? C 0 ? ? C 0 ? ;chain 'C' and (resid 26 through 35 ) ; 6 'X-RAY DIFFRACTION' 6 ? ? D 0 ? ? D 0 ? ;chain 'D' and (resid 4 through 13 ) ; # _phasing.method MR # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALA ? ? ? . 2 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 3 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 4 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.15 5 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" M DC 15 ? ? "C1'" M DC 15 ? ? N1 M DC 15 ? ? 112.02 108.30 3.72 0.30 N 2 1 "O4'" C DA 25 ? ? "C1'" C DA 25 ? ? N9 C DA 25 ? ? 110.36 108.30 2.06 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS B 20 ? ? -144.92 56.10 2 1 PRO B 24 ? ? -77.27 20.14 3 1 LYS A 7 ? ? -82.01 -79.84 4 1 HIS A 23 ? ? -160.87 68.63 5 1 SER A 27 ? ? -75.97 -146.99 6 1 ALA A 35 ? ? -95.86 -73.38 7 1 ASP A 37 ? ? 87.73 -107.11 8 1 LEU A 40 ? ? 68.84 114.92 9 1 THR A 41 ? ? -173.26 77.19 10 1 ARG A 54 ? ? -79.06 20.93 11 1 ARG A 55 ? ? -141.95 -26.56 12 1 VAL A 57 ? ? -91.56 -66.15 13 1 GLN A 63 ? ? 52.22 -90.23 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 ASP _pdbx_validate_peptide_omega.auth_asym_id_1 A _pdbx_validate_peptide_omega.auth_seq_id_1 37 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 THR _pdbx_validate_peptide_omega.auth_asym_id_2 A _pdbx_validate_peptide_omega.auth_seq_id_2 38 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega -142.93 # _pdbx_validate_polymer_linkage.id 1 _pdbx_validate_polymer_linkage.PDB_model_num 1 _pdbx_validate_polymer_linkage.auth_atom_id_1 "O3'" _pdbx_validate_polymer_linkage.auth_asym_id_1 M _pdbx_validate_polymer_linkage.auth_comp_id_1 DA _pdbx_validate_polymer_linkage.auth_seq_id_1 13 _pdbx_validate_polymer_linkage.PDB_ins_code_1 ? _pdbx_validate_polymer_linkage.label_alt_id_1 ? _pdbx_validate_polymer_linkage.auth_atom_id_2 P _pdbx_validate_polymer_linkage.auth_asym_id_2 M _pdbx_validate_polymer_linkage.auth_comp_id_2 DC _pdbx_validate_polymer_linkage.auth_seq_id_2 15 _pdbx_validate_polymer_linkage.PDB_ins_code_2 ? _pdbx_validate_polymer_linkage.label_alt_id_2 ? _pdbx_validate_polymer_linkage.dist 15.81 # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? B HOH 109 ? 7.54 . 2 1 O ? B HOH 110 ? 8.11 . 3 1 O ? L HOH 102 ? 7.05 . 4 1 O ? M HOH 107 ? 6.55 . 5 1 O ? M HOH 108 ? 10.73 . 6 1 O ? A HOH 107 ? 5.98 . 7 1 O ? A HOH 108 ? 7.57 . 8 1 O ? A HOH 109 ? 7.62 . # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id PHE _pdbx_unobs_or_zero_occ_residues.auth_seq_id 5 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id D _pdbx_unobs_or_zero_occ_residues.label_comp_id PHE _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 5BNG 'double helix' 5BNG 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DT 2 1_555 C DA 9 1_555 -0.311 -0.159 0.708 -10.865 -16.750 -1.858 1 L_DT27:DA12_M L 27 ? M 12 ? 20 1 1 B DA 3 1_555 C DT 8 1_555 -0.655 -0.156 0.696 2.426 -4.880 -5.175 2 L_DA28:DT11_M L 28 ? M 11 ? 20 1 1 B DG 4 1_555 C DC 7 1_555 0.588 0.545 0.382 8.011 -6.075 3.073 3 L_DG29:DC10_M L 29 ? M 10 ? ? ? 1 B DC 5 1_555 C DG 6 1_555 0.817 0.085 -0.020 -0.511 -1.266 2.817 4 L_DC30:DG9_M L 30 ? M 9 ? 19 1 1 B DT 6 1_555 C DA 5 1_555 0.121 0.344 0.421 -15.661 -11.894 -8.723 5 L_DT31:DA8_M L 31 ? M 8 ? 20 1 1 B DG 7 1_555 C DC 4 1_555 -0.927 0.650 -0.115 -21.251 -5.772 7.736 6 L_DG32:DC7_M L 32 ? M 7 ? ? ? 1 B DT 8 1_555 C DA 3 1_555 0.949 -0.173 0.883 10.296 -10.354 8.822 7 L_DT33:DA6_M L 33 ? M 6 ? ? 1 1 B DC 9 1_555 C DG 2 1_555 0.374 -0.152 0.174 14.658 -9.992 -4.966 8 L_DC34:DG5_M L 34 ? M 5 ? 19 1 1 B DA 10 1_555 C DT 1 1_555 0.427 0.664 0.225 34.429 -6.896 10.215 9 L_DA35:DT4_M L 35 ? M 4 ? ? ? 1 E DT 3 1_555 F DA 10 1_555 -1.000 0.136 0.727 -31.344 -9.927 0.843 10 C_DT26:DA13_D C 26 ? D 13 ? 20 1 1 E DT 4 1_555 F DA 9 1_555 -1.027 -0.318 -0.144 -19.180 -21.394 -13.366 11 C_DT27:DA12_D C 27 ? D 12 ? 20 1 1 E DG 6 1_555 F DC 7 1_555 0.398 0.139 0.257 6.334 -6.994 1.395 12 C_DG29:DC10_D C 29 ? D 10 ? 19 1 1 E DC 7 1_555 F DG 6 1_555 -0.182 -0.134 -0.233 -0.484 -6.922 -4.495 13 C_DC30:DG9_D C 30 ? D 9 ? 19 1 1 E DT 8 1_555 F DA 5 1_555 -0.353 -0.079 0.760 -22.968 -6.438 -11.723 14 C_DT31:DA8_D C 31 ? D 8 ? 20 1 1 E DG 9 1_555 F DC 4 1_555 -0.742 -0.328 0.185 -4.727 -3.741 -6.815 15 C_DG32:DC7_D C 32 ? D 7 ? 19 1 1 E DC 11 1_555 F DG 2 1_555 0.015 -0.171 1.109 -1.274 1.713 -6.353 16 C_DC34:DG5_D C 34 ? D 5 ? 19 1 1 E DA 12 1_555 F DT 1 1_555 1.569 0.382 0.682 14.809 -11.293 18.535 17 C_DA35:DT4_D C 35 ? D 4 ? ? ? # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DT 2 1_555 C DA 9 1_555 B DA 3 1_555 C DT 8 1_555 -0.224 0.395 2.845 -4.728 -0.577 38.787 0.652 -0.162 2.846 -0.864 7.086 39.067 1 LL_DT27DA28:DT11DA12_MM L 27 ? M 12 ? L 28 ? M 11 ? 1 B DA 3 1_555 C DT 8 1_555 B DG 4 1_555 C DC 7 1_555 0.865 -0.688 3.218 3.224 -0.811 35.372 -1.009 -0.948 3.295 -1.330 -5.292 35.523 2 LL_DA28DG29:DC10DT11_MM L 28 ? M 11 ? L 29 ? M 10 ? 1 B DG 4 1_555 C DC 7 1_555 B DC 5 1_555 C DG 6 1_555 -0.124 -0.418 3.460 2.356 5.150 38.526 -1.282 0.485 3.366 7.755 -3.547 38.925 3 LL_DG29DC30:DG9DC10_MM L 29 ? M 10 ? L 30 ? M 9 ? 1 B DC 5 1_555 C DG 6 1_555 B DT 6 1_555 C DA 5 1_555 -0.878 -0.988 3.682 -0.723 3.328 30.655 -2.578 1.493 3.576 6.270 1.363 30.839 4 LL_DC30DT31:DA8DG9_MM L 30 ? M 9 ? L 31 ? M 8 ? 1 B DT 6 1_555 C DA 5 1_555 B DG 7 1_555 C DC 4 1_555 1.513 0.199 3.391 5.041 5.289 33.473 -0.557 -1.717 3.564 9.049 -8.624 34.239 5 LL_DT31DG32:DC7DA8_MM L 31 ? M 8 ? L 32 ? M 7 ? 1 B DG 7 1_555 C DC 4 1_555 B DT 8 1_555 C DA 3 1_555 0.136 -0.142 2.484 -8.982 11.440 32.027 -1.521 -1.235 2.194 19.526 15.330 35.096 6 LL_DG32DT33:DA6DC7_MM L 32 ? M 7 ? L 33 ? M 6 ? 1 B DT 8 1_555 C DA 3 1_555 B DC 9 1_555 C DG 2 1_555 -1.207 -0.302 3.176 0.334 -1.724 33.718 -0.248 2.131 3.175 -2.969 -0.575 33.762 7 LL_DT33DC34:DG5DA6_MM L 33 ? M 6 ? L 34 ? M 5 ? 1 B DC 9 1_555 C DG 2 1_555 B DA 10 1_555 C DT 1 1_555 1.038 0.843 2.946 5.896 -2.748 37.206 1.629 -0.906 3.002 -4.266 -9.156 37.751 8 LL_DC34DA35:DT4DG5_MM L 34 ? M 5 ? L 35 ? M 4 ? 1 E DT 3 1_555 F DA 10 1_555 E DT 4 1_555 F DA 9 1_555 0.320 -0.899 3.078 11.440 0.006 30.719 -1.596 1.329 3.003 0.011 -20.715 32.732 9 CC_DT26DT27:DA12DA13_DD C 26 ? D 13 ? C 27 ? D 12 ? 1 E DT 4 1_555 F DA 9 1_555 E DG 6 1_555 F DC 7 1_555 1.601 0.910 6.132 -6.328 2.135 77.549 0.612 -1.607 6.027 1.701 5.043 77.791 10 CC_DT27DG29:DC10DA12_DD C 27 ? D 12 ? C 29 ? D 10 ? 1 E DG 6 1_555 F DC 7 1_555 E DC 7 1_555 F DG 6 1_555 -0.343 -0.842 3.348 2.933 3.548 35.317 -1.896 0.991 3.213 5.817 -4.809 35.607 11 CC_DG29DC30:DG9DC10_DD C 29 ? D 10 ? C 30 ? D 9 ? 1 E DC 7 1_555 F DG 6 1_555 E DT 8 1_555 F DA 5 1_555 -0.086 -1.021 4.065 -2.063 -0.078 33.792 -1.738 -0.266 4.065 -0.134 3.545 33.853 12 CC_DC30DT31:DA8DG9_DD C 30 ? D 9 ? C 31 ? D 8 ? 1 E DT 8 1_555 F DA 5 1_555 E DG 9 1_555 F DC 4 1_555 0.984 0.239 2.792 6.869 3.375 35.295 -0.037 -0.728 2.935 5.487 -11.167 36.090 13 CC_DT31DG32:DC7DA8_DD C 31 ? D 8 ? C 32 ? D 7 ? 1 E DG 9 1_555 F DC 4 1_555 E DC 11 1_555 F DG 2 1_555 0.400 -2.112 6.546 -6.443 9.698 65.774 -2.672 -0.862 6.160 8.858 5.885 66.683 14 CC_DG32DC34:DG5DC7_DD C 32 ? D 7 ? C 34 ? D 5 ? 1 E DC 11 1_555 F DG 2 1_555 E DA 12 1_555 F DT 1 1_555 1.620 0.250 3.111 5.144 -1.062 39.824 0.482 -1.786 3.279 -1.551 -7.512 40.155 15 CC_DC34DA35:DT4DG5_DD C 34 ? D 5 ? C 35 ? D 4 ? # _pdbx_entity_nonpoly.entity_id 6 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #