HEADER UNKNOWN FUNCTION 10-JUN-15 5BYP TITLE CRYSTAL STRUCTURE OF AN UNCHARACTERIZED PROTEIN (BACEGG_01585) FROM TITLE 2 BACTEROIDES EGGERTHII DSM 20697 AT 2.60 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES EGGERTHII DSM 20697; SOURCE 3 ORGANISM_TAXID: 483216; SOURCE 4 GENE: BACEGG_01585; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: PB1; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, KEYWDS 2 PROTEIN STRUCTURE INITIATIVE, PSI-BIOLOGY, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 4 01-FEB-23 5BYP 1 SEQADV REVDAT 3 24-JAN-18 5BYP 1 JRNL REVDAT 2 22-NOV-17 5BYP 1 SOURCE REMARK REVDAT 1 08-JUL-15 5BYP 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF AN UNCHARACTERIZED PROTEIN JRNL TITL 2 (BACEGG_01585) FROM BACTEROIDES EGGERTHII DSM 20697 AT 2.60 JRNL TITL 3 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER-TNT 2.10.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SMART,VONRHEIN,WOMACK, REMARK 3 : MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.71 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 8104 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.250 REMARK 3 R VALUE (WORKING SET) : 0.247 REMARK 3 FREE R VALUE : 0.300 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.730 REMARK 3 FREE R VALUE TEST SET COUNT : 383 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 5 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.91 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.95 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2195 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2600 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2080 REMARK 3 BIN R VALUE (WORKING SET) : 0.2562 REMARK 3 BIN FREE R VALUE : 0.3303 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.24 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 115 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1957 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 91.21 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 95.09 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -9.07070 REMARK 3 B22 (A**2) : -9.07070 REMARK 3 B33 (A**2) : 18.14150 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.596 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.909 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.854 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 2016 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 2725 ; 3.000 ; HARMONIC REMARK 3 TORSION ANGLES : 880 ; 4.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 51 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 296 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 2016 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 234 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 2199 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 0.83 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.57 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 2.53 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: {A|30 - 150} REMARK 3 ORIGIN FOR THE GROUP (A): -8.2857 21.3437 -11.0751 REMARK 3 T TENSOR REMARK 3 T11: -0.3040 T22: 0.3040 REMARK 3 T33: -0.3040 T12: 0.1520 REMARK 3 T13: -0.0117 T23: -0.1238 REMARK 3 L TENSOR REMARK 3 L11: 5.4341 L22: 3.7590 REMARK 3 L33: 3.4629 L12: -1.9442 REMARK 3 L13: 0.7672 L23: -1.4129 REMARK 3 S TENSOR REMARK 3 S11: 0.0434 S12: 0.5442 S13: 0.0419 REMARK 3 S21: -0.4097 S22: -0.1382 S23: 0.2423 REMARK 3 S31: 0.1337 S32: -0.5442 S33: 0.0948 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: {B|30 - 150} REMARK 3 ORIGIN FOR THE GROUP (A): 22.8861 10.4599 -16.8491 REMARK 3 T TENSOR REMARK 3 T11: -0.1287 T22: 0.1634 REMARK 3 T33: -0.2066 T12: 0.1520 REMARK 3 T13: -0.0663 T23: 0.0000 REMARK 3 L TENSOR REMARK 3 L11: 6.2612 L22: 3.6140 REMARK 3 L33: 2.8753 L12: -0.3004 REMARK 3 L13: -0.0357 L23: -0.3228 REMARK 3 S TENSOR REMARK 3 S11: -0.3086 S12: 0.3198 S13: 0.5050 REMARK 3 S21: 0.4801 S22: 0.0877 S23: -0.3893 REMARK 3 S31: -0.0964 S32: -0.0052 S33: 0.2209 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. A MET-INHIBITION PROTOCOL WAS USED REMARK 3 FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. REMARK 3 THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO REMARK 3 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. 2. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B REMARK 3 FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U REMARK 3 FACTORS. 3. THE MAD PHASES WERE USED AS RESTRAINTS DURING REMARK 3 REFINEMENT. REMARK 4 REMARK 4 5BYP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-JUN-15. REMARK 100 THE DEPOSITION ID IS D_1000210793. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-MAY-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 3.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97839,0.91837,0.9798 REMARK 200 MONOCHROMATOR : SINGLE CRYSTAL SI(111) BENT REMARK 200 OPTICS : FLAT MIRROR (VERTICAL FOCUSING); REMARK 200 SINGLE CRYSTAL SI(111) BENT REMARK 200 MONOCHROMATOR (HORIZONTAL REMARK 200 FOCUSING) REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : XDS, XSCALE JANUARY 10, 2014 REMARK 200 BUILT=20140307 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8129 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 42.712 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.4 REMARK 200 DATA REDUNDANCY : 5.033 REMARK 200 R MERGE (I) : 0.04300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.7100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 37.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 1.05400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX, SHARP, SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.89 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.08 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 34.00% POLYETHYLENE GLYCOL 6000, REMARK 280 0.100M SODIUM IODIDE, 0.1M SODIUM CITRATE - CITRIC ACID PH 3.5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 41 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 3555 -Y,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X,Z+3/4 REMARK 290 5555 -X+1/2,Y,-Z+3/4 REMARK 290 6555 X,-Y+1/2,-Z+1/4 REMARK 290 7555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X,-Y,Z REMARK 290 11555 -Y+1/2,X,Z+3/4 REMARK 290 12555 Y,-X+1/2,Z+1/4 REMARK 290 13555 -X,Y+1/2,-Z+1/4 REMARK 290 14555 X+1/2,-Y,-Z+3/4 REMARK 290 15555 Y,X,-Z REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 32.40000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 32.40000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 117.96500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 32.40000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 58.98250 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 32.40000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 176.94750 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 32.40000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 176.94750 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 32.40000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 58.98250 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 32.40000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 32.40000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 117.96500 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 32.40000 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 32.40000 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 117.96500 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 32.40000 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 176.94750 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 32.40000 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 58.98250 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 32.40000 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 58.98250 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 32.40000 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 176.94750 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 32.40000 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 32.40000 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 117.96500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 ASN A 25 REMARK 465 ASP A 26 REMARK 465 GLY A 27 REMARK 465 GLY A 28 REMARK 465 SER A 29 REMARK 465 GLY B 0 REMARK 465 ASN B 25 REMARK 465 ASP B 26 REMARK 465 GLY B 27 REMARK 465 GLY B 28 REMARK 465 SER B 29 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 30 CG OD1 OD2 REMARK 470 ARG A 38 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 46 CG CD CE NZ REMARK 470 ASN A 68 CG OD1 ND2 REMARK 470 LYS A 69 CG CD CE NZ REMARK 470 LYS A 81 CG CD CE NZ REMARK 470 ASP A 84 CG OD1 OD2 REMARK 470 LYS A 134 CG CD CE NZ REMARK 470 LYS A 144 CG CD CE NZ REMARK 470 ASP B 30 CG OD1 OD2 REMARK 470 ASP B 51 CG OD1 OD2 REMARK 470 ASN B 68 CG OD1 ND2 REMARK 470 LYS B 69 CG CD CE NZ REMARK 470 SER B 70 OG REMARK 470 LYS B 81 CG CD CE NZ REMARK 470 LYS B 134 CG CD CE NZ REMARK 470 LYS B 144 CG CD CE NZ REMARK 470 TYR B 150 CG CD1 CD2 CE1 CE2 CZ OH REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 44 -5.31 -54.21 REMARK 500 ASP A 51 -30.38 -134.80 REMARK 500 LYS A 59 56.25 38.39 REMARK 500 ASN A 68 117.75 -160.63 REMARK 500 ASP A 84 -104.79 55.25 REMARK 500 ASN A 95 42.68 -98.09 REMARK 500 PHE A 116 -62.21 -94.28 REMARK 500 PRO B 43 -71.72 -41.67 REMARK 500 LYS B 59 55.48 38.37 REMARK 500 LYS B 69 -3.86 -51.01 REMARK 500 ASP B 84 -104.36 54.81 REMARK 500 ASN B 95 42.49 -97.32 REMARK 500 TRP B 118 2.21 -56.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: JCSG-417708 RELATED DB: TARGETTRACK REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT (25-150) WAS EXPRESSED WITH A PURIFICATION TAG REMARK 999 MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING REMARK 999 ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. DBREF 5BYP A 25 150 UNP B7AGQ7 B7AGQ7_9BACE 25 150 DBREF 5BYP B 25 150 UNP B7AGQ7 B7AGQ7_9BACE 25 150 SEQADV 5BYP GLY A 0 UNP B7AGQ7 EXPRESSION TAG SEQADV 5BYP GLY B 0 UNP B7AGQ7 EXPRESSION TAG SEQRES 1 A 127 GLY ASN ASP GLY GLY SER ASP TRP VAL GLY LYS TRP GLN SEQRES 2 A 127 LEU ARG GLU TYR GLN TYR PRO ASP GLY LYS VAL GLN LYS SEQRES 3 A 127 VAL ASP SER ILE PHE TYR GLY PHE GLN LYS GLY SER PHE SEQRES 4 A 127 LEU ALA TYR CYS MSE ASN LYS SER GLY SER TYR GLU GLY SEQRES 5 A 127 PHE TYR GLY TYR TYR LYS LEU LYS ASP ASP GLU ILE SER SEQRES 6 A 127 ILE THR LEU TRP PRO ASP ASN SER SER GLY ASN GLU ALA SEQRES 7 A 127 ALA HIS GLU GLU LEU VAL ASN SER ALA SER TYR LYS ASN SEQRES 8 A 127 PHE PHE GLY TRP GLY ASP THR GLY GLU ARG THR PHE LYS SEQRES 9 A 127 VAL GLU GLU LEU THR ASP LYS LYS MSE ARG LEU ASN TYR SEQRES 10 A 127 GLU GLY THR LYS TYR VAL PHE ARG LYS TYR SEQRES 1 B 127 GLY ASN ASP GLY GLY SER ASP TRP VAL GLY LYS TRP GLN SEQRES 2 B 127 LEU ARG GLU TYR GLN TYR PRO ASP GLY LYS VAL GLN LYS SEQRES 3 B 127 VAL ASP SER ILE PHE TYR GLY PHE GLN LYS GLY SER PHE SEQRES 4 B 127 LEU ALA TYR CYS MSE ASN LYS SER GLY SER TYR GLU GLY SEQRES 5 B 127 PHE TYR GLY TYR TYR LYS LEU LYS ASP ASP GLU ILE SER SEQRES 6 B 127 ILE THR LEU TRP PRO ASP ASN SER SER GLY ASN GLU ALA SEQRES 7 B 127 ALA HIS GLU GLU LEU VAL ASN SER ALA SER TYR LYS ASN SEQRES 8 B 127 PHE PHE GLY TRP GLY ASP THR GLY GLU ARG THR PHE LYS SEQRES 9 B 127 VAL GLU GLU LEU THR ASP LYS LYS MSE ARG LEU ASN TYR SEQRES 10 B 127 GLU GLY THR LYS TYR VAL PHE ARG LYS TYR MODRES 5BYP MSE A 67 MET MODIFIED RESIDUE MODRES 5BYP MSE A 136 MET MODIFIED RESIDUE MODRES 5BYP MSE B 67 MET MODIFIED RESIDUE MODRES 5BYP MSE B 136 MET MODIFIED RESIDUE HET MSE A 67 8 HET MSE A 136 8 HET MSE B 67 8 HET MSE B 136 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 4(C5 H11 N O2 SE) HELIX 1 AA1 SER A 96 GLY A 98 5 3 HELIX 2 AA2 ASN A 99 ASN A 108 1 10 HELIX 3 AA3 SER A 109 PHE A 116 1 8 HELIX 4 AA4 SER B 96 GLY B 98 5 3 HELIX 5 AA5 ASN B 99 ASN B 108 1 10 HELIX 6 AA6 SER B 109 PHE B 116 1 8 SHEET 1 AA110 VAL A 47 LYS A 49 0 SHEET 2 AA110 GLY A 33 GLN A 41 -1 N TYR A 40 O GLN A 48 SHEET 3 AA110 THR A 143 LYS A 149 -1 O ARG A 148 N GLN A 36 SHEET 4 AA110 LYS A 135 TYR A 140 -1 N MSE A 136 O PHE A 147 SHEET 5 AA110 GLU A 123 LEU A 131 -1 N GLU A 129 O ARG A 137 SHEET 6 AA110 GLU A 86 LEU A 91 -1 N ILE A 87 O PHE A 126 SHEET 7 AA110 GLU A 74 LYS A 83 -1 N TYR A 79 O THR A 90 SHEET 8 AA110 SER A 61 CYS A 66 -1 N PHE A 62 O GLY A 78 SHEET 9 AA110 ILE A 53 GLN A 58 -1 N GLY A 56 O LEU A 63 SHEET 10 AA110 GLY A 33 GLN A 41 -1 N TRP A 35 O TYR A 55 SHEET 1 AA210 VAL B 47 LYS B 49 0 SHEET 2 AA210 GLY B 33 GLN B 41 -1 N TYR B 40 O GLN B 48 SHEET 3 AA210 THR B 143 LYS B 149 -1 O ARG B 148 N GLN B 36 SHEET 4 AA210 LYS B 135 TYR B 140 -1 N MSE B 136 O PHE B 147 SHEET 5 AA210 GLU B 123 LEU B 131 -1 N GLU B 129 O ARG B 137 SHEET 6 AA210 GLU B 86 LEU B 91 -1 N ILE B 87 O PHE B 126 SHEET 7 AA210 SER B 72 LYS B 83 -1 N TYR B 79 O THR B 90 SHEET 8 AA210 SER B 61 ASN B 68 -1 N PHE B 62 O GLY B 78 SHEET 9 AA210 ILE B 53 GLN B 58 -1 N GLY B 56 O LEU B 63 SHEET 10 AA210 GLY B 33 GLN B 41 -1 N TRP B 35 O TYR B 55 LINK C CYS A 66 N MSE A 67 1555 1555 1.32 LINK C MSE A 67 N ASN A 68 1555 1555 1.32 LINK C LYS A 135 N MSE A 136 1555 1555 1.35 LINK C MSE A 136 N ARG A 137 1555 1555 1.35 LINK C CYS B 66 N MSE B 67 1555 1555 1.34 LINK C MSE B 67 N ASN B 68 1555 1555 1.33 LINK C LYS B 135 N MSE B 136 1555 1555 1.34 LINK C MSE B 136 N ARG B 137 1555 1555 1.34 CISPEP 1 TRP A 92 PRO A 93 0 3.48 CISPEP 2 TRP B 92 PRO B 93 0 3.22 CRYST1 64.800 64.800 235.930 90.00 90.00 90.00 I 41 2 2 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015432 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015432 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004239 0.00000