data_5D5Y # _entry.id 5D5Y # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5D5Y WWPDB D_1000212718 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5D5Y _pdbx_database_status.recvd_initial_deposition_date 2015-08-11 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Neudegger, T.' 1 'Verghese, J.' 2 'Hayer-Hartl, M.' 3 'Hartl, F.U.' 4 'Bracher, A.' 5 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Nat.Struct.Mol.Biol. _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1545-9985 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 23 _citation.language ? _citation.page_first 140 _citation.page_last 146 _citation.title 'Structure of human heat-shock transcription factor 1 in complex with DNA.' _citation.year 2016 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/nsmb.3149 _citation.pdbx_database_id_PubMed 26727489 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Neudegger, T.' 1 primary 'Verghese, J.' 2 primary 'Hayer-Hartl, M.' 3 primary 'Hartl, F.U.' 4 primary 'Bracher, A.' 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 5D5Y _cell.details ? _cell.formula_units_Z ? _cell.length_a 24.823 _cell.length_a_esd ? _cell.length_b 151.535 _cell.length_b_esd ? _cell.length_c 47.745 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 16 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5D5Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Putative transcription factor' 5710.513 2 ? ? 'UNP residues 160-209' ? 2 water nat water 18.015 125 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name CtSkn7 # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code SQQQIAALSESLQATQQQLQALQQQCYELEKTNRLLVSEVMTLQKMVKAQ _entity_poly.pdbx_seq_one_letter_code_can SQQQIAALSESLQATQQQLQALQQQCYELEKTNRLLVSEVMTLQKMVKAQ _entity_poly.pdbx_strand_id B,A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 GLN n 1 3 GLN n 1 4 GLN n 1 5 ILE n 1 6 ALA n 1 7 ALA n 1 8 LEU n 1 9 SER n 1 10 GLU n 1 11 SER n 1 12 LEU n 1 13 GLN n 1 14 ALA n 1 15 THR n 1 16 GLN n 1 17 GLN n 1 18 GLN n 1 19 LEU n 1 20 GLN n 1 21 ALA n 1 22 LEU n 1 23 GLN n 1 24 GLN n 1 25 GLN n 1 26 CYS n 1 27 TYR n 1 28 GLU n 1 29 LEU n 1 30 GLU n 1 31 LYS n 1 32 THR n 1 33 ASN n 1 34 ARG n 1 35 LEU n 1 36 LEU n 1 37 VAL n 1 38 SER n 1 39 GLU n 1 40 VAL n 1 41 MET n 1 42 THR n 1 43 LEU n 1 44 GLN n 1 45 LYS n 1 46 MET n 1 47 VAL n 1 48 LYS n 1 49 ALA n 1 50 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 50 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene CTHT_0048700 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Chaetomium thermophilum' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 209285 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant 'Rosetta 2' _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pHUE _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code G0SB31_CHATD _struct_ref.pdbx_db_accession G0SB31 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code SQQQIAALSESLQATQQQLQALQQQCYELEKTNRLLVSEVMTLQKMVKAQ _struct_ref.pdbx_align_begin 160 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5D5Y B 1 ? 50 ? G0SB31 160 ? 209 ? 160 209 2 1 5D5Y A 1 ? 50 ? G0SB31 160 ? 209 ? 160 209 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5D5Y _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.97 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 37.42 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '20 % PEG-6000, 0.1 M HEPES-NaOH pH 7.0' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2014-02-14 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.9785 1.0 2 0.97857 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ESRF BEAMLINE ID29' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97857 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ID29 _diffrn_source.pdbx_synchrotron_site ESRF # _reflns.B_iso_Wilson_estimate 10.2 _reflns.entry_id 5D5Y _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.030 _reflns.d_resolution_low 40.390 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 45013 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 98.700 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 11.400 _reflns.pdbx_Rmerge_I_obs 0.066 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 17.100 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all 0.020 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 514459 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.998 _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 1.030 1.050 ? 1.500 9642 ? ? 1771 ? 80.800 ? ? ? ? 1.103 ? ? ? ? ? ? ? ? 5.400 ? ? ? ? ? 0.495 0 1 1 0.680 ? 5.630 40.390 ? 40.100 3491 ? ? 346 ? 99.800 ? ? ? ? 0.066 ? ? ? ? ? ? ? ? 10.100 ? ? ? ? ? 0.023 0 2 1 0.996 ? # _refine.aniso_B[1][1] 0.6600 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][2] 0.2300 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] -0.8900 _refine.B_iso_max 98.270 _refine.B_iso_mean 21.2600 _refine.B_iso_min 6.870 _refine.correlation_coeff_Fo_to_Fc 0.9650 _refine.correlation_coeff_Fo_to_Fc_free 0.9390 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5D5Y _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.0300 _refine.ls_d_res_low 30.0000 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 42643 _refine.ls_number_reflns_R_free 2257 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.1400 _refine.ls_percent_reflns_R_free 5.0000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1664 _refine.ls_R_factor_R_free 0.1990 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1648 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free 0.1940 _refine.ls_wR_factor_R_work 0.1629 _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details MASK _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.0290 _refine.pdbx_overall_ESU_R_Free 0.0320 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 0.8150 _refine.overall_SU_ML 0.0190 _refine.overall_SU_R_Cruickshank_DPI 0.0294 _refine.overall_SU_R_free 0.0316 _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set 0.8776 _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 1.0300 _refine_hist.d_res_low 30.0000 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 127 _refine_hist.number_atoms_total 913 _refine_hist.pdbx_number_residues_total 100 _refine_hist.pdbx_B_iso_mean_solvent 32.74 _refine_hist.pdbx_number_atoms_protein 786 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.022 0.019 858 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.003 0.020 864 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.853 1.983 1165 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 0.985 3.002 1988 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 4.522 5.000 114 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 39.560 28.000 40 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 13.471 15.000 184 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 17.264 15.000 3 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.097 0.200 140 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.007 0.020 1029 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 186 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? 6.912 3.000 1721 ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? 33.470 5.000 28 ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? 15.219 5.000 1812 ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.0300 _refine_ls_shell.d_res_low 1.0570 _refine_ls_shell.number_reflns_all 2969 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 149 _refine_ls_shell.number_reflns_R_work 2820 _refine_ls_shell.percent_reflns_obs 90.9900 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.3910 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.3550 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 5D5Y _struct.title 'Structure of Chaetomium thermophilum Skn7 coiled-coil domain, crystal form I' _struct.pdbx_descriptor 'Putative transcription factor' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 5D5Y _struct_keywords.text 'coiled-coil, transcription' _struct_keywords.pdbx_keywords TRANSCRIPTION # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 1 ? ALA A 49 ? SER B 160 ALA B 208 1 ? 49 HELX_P HELX_P2 AA2 GLN B 2 ? GLN B 50 ? GLN A 161 GLN A 209 1 ? 49 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id disulf1 _struct_conn.conn_type_id disulf _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 26 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 26 _struct_conn.ptnr2_label_atom_id SG _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id B _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 185 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 185 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 2.053 _struct_conn.pdbx_value_order ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _atom_sites.entry_id 5D5Y _atom_sites.fract_transf_matrix[1][1] 0.040285 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.006599 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.020945 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 160 160 SER SER B . n A 1 2 GLN 2 161 161 GLN GLN B . n A 1 3 GLN 3 162 162 GLN GLN B . n A 1 4 GLN 4 163 163 GLN GLN B . n A 1 5 ILE 5 164 164 ILE ILE B . n A 1 6 ALA 6 165 165 ALA ALA B . n A 1 7 ALA 7 166 166 ALA ALA B . n A 1 8 LEU 8 167 167 LEU LEU B . n A 1 9 SER 9 168 168 SER SER B . n A 1 10 GLU 10 169 169 GLU GLU B . n A 1 11 SER 11 170 170 SER SER B . n A 1 12 LEU 12 171 171 LEU LEU B . n A 1 13 GLN 13 172 172 GLN GLN B . n A 1 14 ALA 14 173 173 ALA ALA B . n A 1 15 THR 15 174 174 THR THR B . n A 1 16 GLN 16 175 175 GLN GLN B . n A 1 17 GLN 17 176 176 GLN GLN B . n A 1 18 GLN 18 177 177 GLN GLN B . n A 1 19 LEU 19 178 178 LEU LEU B . n A 1 20 GLN 20 179 179 GLN GLN B . n A 1 21 ALA 21 180 180 ALA ALA B . n A 1 22 LEU 22 181 181 LEU LEU B . n A 1 23 GLN 23 182 182 GLN GLN B . n A 1 24 GLN 24 183 183 GLN GLN B . n A 1 25 GLN 25 184 184 GLN GLN B . n A 1 26 CYS 26 185 185 CYS CYS B . n A 1 27 TYR 27 186 186 TYR TYR B . n A 1 28 GLU 28 187 187 GLU GLU B . n A 1 29 LEU 29 188 188 LEU LEU B . n A 1 30 GLU 30 189 189 GLU GLU B . n A 1 31 LYS 31 190 190 LYS LYS B . n A 1 32 THR 32 191 191 THR THR B . n A 1 33 ASN 33 192 192 ASN ASN B . n A 1 34 ARG 34 193 193 ARG ARG B . n A 1 35 LEU 35 194 194 LEU LEU B . n A 1 36 LEU 36 195 195 LEU LEU B . n A 1 37 VAL 37 196 196 VAL VAL B . n A 1 38 SER 38 197 197 SER SER B . n A 1 39 GLU 39 198 198 GLU GLU B . n A 1 40 VAL 40 199 199 VAL VAL B . n A 1 41 MET 41 200 200 MET MET B . n A 1 42 THR 42 201 201 THR THR B . n A 1 43 LEU 43 202 202 LEU LEU B . n A 1 44 GLN 44 203 203 GLN GLN B . n A 1 45 LYS 45 204 204 LYS LYS B . n A 1 46 MET 46 205 205 MET MET B . n A 1 47 VAL 47 206 206 VAL VAL B . n A 1 48 LYS 48 207 207 LYS LYS B . n A 1 49 ALA 49 208 208 ALA ALA B . n A 1 50 GLN 50 209 209 GLN GLN B . n B 1 1 SER 1 160 160 SER SER A . n B 1 2 GLN 2 161 161 GLN GLN A . n B 1 3 GLN 3 162 162 GLN GLN A . n B 1 4 GLN 4 163 163 GLN GLN A . n B 1 5 ILE 5 164 164 ILE ILE A . n B 1 6 ALA 6 165 165 ALA ALA A . n B 1 7 ALA 7 166 166 ALA ALA A . n B 1 8 LEU 8 167 167 LEU LEU A . n B 1 9 SER 9 168 168 SER SER A . n B 1 10 GLU 10 169 169 GLU GLU A . n B 1 11 SER 11 170 170 SER SER A . n B 1 12 LEU 12 171 171 LEU LEU A . n B 1 13 GLN 13 172 172 GLN GLN A . n B 1 14 ALA 14 173 173 ALA ALA A . n B 1 15 THR 15 174 174 THR THR A . n B 1 16 GLN 16 175 175 GLN GLN A . n B 1 17 GLN 17 176 176 GLN GLN A . n B 1 18 GLN 18 177 177 GLN GLN A . n B 1 19 LEU 19 178 178 LEU LEU A . n B 1 20 GLN 20 179 179 GLN GLN A . n B 1 21 ALA 21 180 180 ALA ALA A . n B 1 22 LEU 22 181 181 LEU LEU A . n B 1 23 GLN 23 182 182 GLN GLN A . n B 1 24 GLN 24 183 183 GLN GLN A . n B 1 25 GLN 25 184 184 GLN GLN A . n B 1 26 CYS 26 185 185 CYS CYS A . n B 1 27 TYR 27 186 186 TYR TYR A . n B 1 28 GLU 28 187 187 GLU GLU A . n B 1 29 LEU 29 188 188 LEU LEU A . n B 1 30 GLU 30 189 189 GLU GLU A . n B 1 31 LYS 31 190 190 LYS LYS A . n B 1 32 THR 32 191 191 THR THR A . n B 1 33 ASN 33 192 192 ASN ASN A . n B 1 34 ARG 34 193 193 ARG ARG A . n B 1 35 LEU 35 194 194 LEU LEU A . n B 1 36 LEU 36 195 195 LEU LEU A . n B 1 37 VAL 37 196 196 VAL VAL A . n B 1 38 SER 38 197 197 SER SER A . n B 1 39 GLU 39 198 198 GLU GLU A . n B 1 40 VAL 40 199 199 VAL VAL A . n B 1 41 MET 41 200 200 MET MET A . n B 1 42 THR 42 201 201 THR THR A . n B 1 43 LEU 43 202 202 LEU LEU A . n B 1 44 GLN 44 203 203 GLN GLN A . n B 1 45 LYS 45 204 204 LYS LYS A . n B 1 46 MET 46 205 205 MET MET A . n B 1 47 VAL 47 206 206 VAL VAL A . n B 1 48 LYS 48 207 207 LYS LYS A . n B 1 49 ALA 49 208 208 ALA ALA A . n B 1 50 GLN 50 209 209 GLN GLN A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 301 138 HOH HOH B . C 2 HOH 2 302 60 HOH HOH B . C 2 HOH 3 303 118 HOH HOH B . C 2 HOH 4 304 43 HOH HOH B . C 2 HOH 5 305 108 HOH HOH B . C 2 HOH 6 306 12 HOH HOH B . C 2 HOH 7 307 4 HOH HOH B . C 2 HOH 8 308 46 HOH HOH B . C 2 HOH 9 309 39 HOH HOH B . C 2 HOH 10 310 35 HOH HOH B . C 2 HOH 11 311 37 HOH HOH B . C 2 HOH 12 312 38 HOH HOH B . C 2 HOH 13 313 104 HOH HOH B . C 2 HOH 14 314 31 HOH HOH B . C 2 HOH 15 315 28 HOH HOH B . C 2 HOH 16 316 13 HOH HOH B . C 2 HOH 17 317 24 HOH HOH B . C 2 HOH 18 318 19 HOH HOH B . C 2 HOH 19 319 10 HOH HOH B . C 2 HOH 20 320 120 HOH HOH B . C 2 HOH 21 321 17 HOH HOH B . C 2 HOH 22 322 6 HOH HOH B . C 2 HOH 23 323 30 HOH HOH B . C 2 HOH 24 324 76 HOH HOH B . C 2 HOH 25 325 102 HOH HOH B . C 2 HOH 26 326 14 HOH HOH B . C 2 HOH 27 327 3 HOH HOH B . C 2 HOH 28 328 99 HOH HOH B . C 2 HOH 29 329 101 HOH HOH B . C 2 HOH 30 330 121 HOH HOH B . C 2 HOH 31 331 48 HOH HOH B . C 2 HOH 32 332 100 HOH HOH B . C 2 HOH 33 333 109 HOH HOH B . C 2 HOH 34 334 113 HOH HOH B . C 2 HOH 35 335 1 HOH HOH B . C 2 HOH 36 336 88 HOH HOH B . C 2 HOH 37 337 103 HOH HOH B . C 2 HOH 38 338 29 HOH HOH B . C 2 HOH 39 339 51 HOH HOH B . C 2 HOH 40 340 107 HOH HOH B . C 2 HOH 41 341 40 HOH HOH B . C 2 HOH 42 342 84 HOH HOH B . C 2 HOH 43 343 69 HOH HOH B . C 2 HOH 44 344 32 HOH HOH B . C 2 HOH 45 345 18 HOH HOH B . C 2 HOH 46 346 146 HOH HOH B . C 2 HOH 47 347 41 HOH HOH B . C 2 HOH 48 348 96 HOH HOH B . C 2 HOH 49 349 142 HOH HOH B . C 2 HOH 50 350 132 HOH HOH B . C 2 HOH 51 351 78 HOH HOH B . C 2 HOH 52 352 139 HOH HOH B . C 2 HOH 53 353 66 HOH HOH B . C 2 HOH 54 354 44 HOH HOH B . C 2 HOH 55 355 141 HOH HOH B . C 2 HOH 56 356 65 HOH HOH B . C 2 HOH 57 357 140 HOH HOH B . D 2 HOH 1 301 61 HOH HOH A . D 2 HOH 2 302 68 HOH HOH A . D 2 HOH 3 303 93 HOH HOH A . D 2 HOH 4 304 94 HOH HOH A . D 2 HOH 5 305 126 HOH HOH A . D 2 HOH 6 306 25 HOH HOH A . D 2 HOH 7 307 5 HOH HOH A . D 2 HOH 8 308 122 HOH HOH A . D 2 HOH 9 309 111 HOH HOH A . D 2 HOH 10 310 23 HOH HOH A . D 2 HOH 11 311 56 HOH HOH A . D 2 HOH 12 312 11 HOH HOH A . D 2 HOH 13 313 21 HOH HOH A . D 2 HOH 14 314 85 HOH HOH A . D 2 HOH 15 315 50 HOH HOH A . D 2 HOH 16 316 116 HOH HOH A . D 2 HOH 17 317 81 HOH HOH A . D 2 HOH 18 318 54 HOH HOH A . D 2 HOH 19 319 97 HOH HOH A . D 2 HOH 20 320 45 HOH HOH A . D 2 HOH 21 321 2 HOH HOH A . D 2 HOH 22 322 26 HOH HOH A . D 2 HOH 23 323 106 HOH HOH A . D 2 HOH 24 324 75 HOH HOH A . D 2 HOH 25 325 110 HOH HOH A . D 2 HOH 26 326 7 HOH HOH A . D 2 HOH 27 327 15 HOH HOH A . D 2 HOH 28 328 127 HOH HOH A . D 2 HOH 29 329 114 HOH HOH A . D 2 HOH 30 330 115 HOH HOH A . D 2 HOH 31 331 16 HOH HOH A . D 2 HOH 32 332 91 HOH HOH A . D 2 HOH 33 333 8 HOH HOH A . D 2 HOH 34 334 34 HOH HOH A . D 2 HOH 35 335 83 HOH HOH A . D 2 HOH 36 336 9 HOH HOH A . D 2 HOH 37 337 87 HOH HOH A . D 2 HOH 38 338 119 HOH HOH A . D 2 HOH 39 339 125 HOH HOH A . D 2 HOH 40 340 59 HOH HOH A . D 2 HOH 41 341 47 HOH HOH A . D 2 HOH 42 342 144 HOH HOH A . D 2 HOH 43 343 58 HOH HOH A . D 2 HOH 44 344 49 HOH HOH A . D 2 HOH 45 345 98 HOH HOH A . D 2 HOH 46 346 105 HOH HOH A . D 2 HOH 47 347 42 HOH HOH A . D 2 HOH 48 348 145 HOH HOH A . D 2 HOH 49 349 33 HOH HOH A . D 2 HOH 50 350 143 HOH HOH A . D 2 HOH 51 351 71 HOH HOH A . D 2 HOH 52 352 92 HOH HOH A . D 2 HOH 53 353 86 HOH HOH A . D 2 HOH 54 354 95 HOH HOH A . D 2 HOH 55 355 77 HOH HOH A . D 2 HOH 56 356 80 HOH HOH A . D 2 HOH 57 357 82 HOH HOH A . D 2 HOH 58 358 79 HOH HOH A . D 2 HOH 59 359 36 HOH HOH A . D 2 HOH 60 360 67 HOH HOH A . D 2 HOH 61 361 22 HOH HOH A . D 2 HOH 62 362 137 HOH HOH A . D 2 HOH 63 363 20 HOH HOH A . D 2 HOH 64 364 64 HOH HOH A . D 2 HOH 65 365 62 HOH HOH A . D 2 HOH 66 366 90 HOH HOH A . D 2 HOH 67 367 72 HOH HOH A . D 2 HOH 68 368 74 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 9250 ? 1 MORE -92 ? 1 'SSA (A^2)' 10650 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 3_454 -x-1,y,-z-1/2 -1.0000000000 0.0000000000 0.0000000000 -24.8230000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 -23.8725000000 # _pdbx_point_symmetry.entry_id 5D5Y _pdbx_point_symmetry.Schoenflies_symbol C _pdbx_point_symmetry.circular_symmetry 2 _pdbx_point_symmetry.H-M_notation ? # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 B ARG 193 ? A ARG 34 2 1 A HOH 335 ? D HOH . 3 1 A HOH 360 ? D HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-12-30 2 'Structure model' 1 1 2016-01-13 3 'Structure model' 1 2 2016-01-20 4 'Structure model' 1 3 2016-02-10 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Structure summary' 3 4 'Structure model' 'Database references' # _diffrn_reflns.diffrn_id 1 _diffrn_reflns.pdbx_d_res_high 1.950 _diffrn_reflns.pdbx_d_res_low 47.740 _diffrn_reflns.pdbx_number_obs 6952 _diffrn_reflns.pdbx_Rmerge_I_obs 0.079 _diffrn_reflns.pdbx_Rsym_value ? _diffrn_reflns.pdbx_chi_squared ? _diffrn_reflns.pdbx_redundancy 44.80 _diffrn_reflns.pdbx_rejects 9 _diffrn_reflns.pdbx_percent_possible_obs 99.40 _diffrn_reflns.pdbx_observed_criterion ? _diffrn_reflns.number 311621 _diffrn_reflns.limit_h_max ? _diffrn_reflns.limit_h_min ? _diffrn_reflns.limit_k_max ? _diffrn_reflns.limit_k_min ? _diffrn_reflns.limit_l_max ? _diffrn_reflns.limit_l_min ? # loop_ _pdbx_diffrn_reflns_shell.diffrn_id _pdbx_diffrn_reflns_shell.d_res_high _pdbx_diffrn_reflns_shell.d_res_low _pdbx_diffrn_reflns_shell.number_obs _pdbx_diffrn_reflns_shell.rejects _pdbx_diffrn_reflns_shell.Rmerge_I_obs _pdbx_diffrn_reflns_shell.Rsym_value _pdbx_diffrn_reflns_shell.chi_squared _pdbx_diffrn_reflns_shell.redundancy _pdbx_diffrn_reflns_shell.percent_possible_obs 1 1.95 2.00 ? ? 0.769 ? ? 22.70 ? 1 8.93 47.74 ? ? 0.047 ? ? 39.80 ? # _phasing.method SAD # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? 0.1.27 1 ? phasing ? ? ? ? ? ? ? ? ? ? ? SHELX ? ? ? . 2 ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.7.0029 3 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.15 4 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 5 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 NZ _pdbx_validate_close_contact.auth_asym_id_1 B _pdbx_validate_close_contact.auth_comp_id_1 LYS _pdbx_validate_close_contact.auth_seq_id_1 190 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 B _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 302 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.85 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 346 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 350 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 3_454 _pdbx_validate_symm_contact.dist 1.91 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 C B ILE 164 ? ? N B ALA 165 ? ? 1.489 1.336 0.153 0.023 Y 2 1 NE B ARG 193 ? A CZ B ARG 193 ? A 1.521 1.326 0.195 0.013 N 3 1 CZ B ARG 193 ? A NH1 B ARG 193 ? A 1.116 1.326 -0.210 0.013 N 4 1 CZ B ARG 193 ? A NH2 B ARG 193 ? A 1.415 1.326 0.089 0.013 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NH1 B ARG 193 ? A CZ B ARG 193 ? A NH2 B ARG 193 ? A 130.39 119.40 10.99 1.10 N 2 1 NE B ARG 193 ? A CZ B ARG 193 ? A NH1 B ARG 193 ? A 123.33 120.30 3.03 0.50 N 3 1 NE B ARG 193 ? A CZ B ARG 193 ? A NH2 B ARG 193 ? A 106.09 120.30 -14.21 0.50 N 4 1 NE A ARG 193 ? ? CZ A ARG 193 ? ? NH1 A ARG 193 ? ? 124.63 120.30 4.33 0.50 N 5 1 NE A ARG 193 ? ? CZ A ARG 193 ? ? NH2 A ARG 193 ? ? 115.29 120.30 -5.01 0.50 N 6 1 CG A MET 205 ? ? SD A MET 205 ? ? CE A MET 205 ? ? 84.77 100.20 -15.43 1.60 N # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? A HOH 367 ? 5.96 . 2 1 O ? A HOH 368 ? 6.98 . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 B GLN 162 ? CG ? A GLN 3 CG 2 1 Y 1 B GLN 162 ? CD ? A GLN 3 CD 3 1 Y 1 B GLN 162 ? OE1 ? A GLN 3 OE1 4 1 Y 1 B GLN 162 ? NE2 ? A GLN 3 NE2 5 1 Y 1 A GLN 162 ? CG ? B GLN 3 CG 6 1 Y 1 A GLN 162 ? CD ? B GLN 3 CD 7 1 Y 1 A GLN 162 ? OE1 ? B GLN 3 OE1 8 1 Y 1 A GLN 162 ? NE2 ? B GLN 3 NE2 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #