data_5EB9 # _entry.id 5EB9 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5EB9 WWPDB D_1000210962 # loop_ _pdbx_database_related.content_type _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.details unspecified 5EDX PDB . unspecified 5EBG PDB . # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5EB9 _pdbx_database_status.recvd_initial_deposition_date 2015-10-18 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Liu, Y.J.' 1 'Qi, J.X.' 2 'Xia, C.' 3 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Sci Rep' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2045-2322 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 6 _citation.language ? _citation.page_first 24788 _citation.page_last 24788 _citation.title ;The structural basis of chicken, swine and bovine CD8 alpha alpha dimers provides insight into the co-evolution with MHC I in endotherm species. ; _citation.year 2016 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/srep24788 _citation.pdbx_database_id_PubMed 27122108 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Liu, Y.' 1 primary 'Li, X.' 2 primary 'Qi, J.' 3 primary 'Zhang, N.' 4 primary 'Xia, C.' 5 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 5EB9 _cell.details ? _cell.formula_units_Z ? _cell.length_a 45.360 _cell.length_a_esd ? _cell.length_b 87.063 _cell.length_b_esd ? _cell.length_c 70.308 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5EB9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'CD8 alpha chain' 13660.378 1 ? ? 'UNP RESIDUES 20-137' ? 2 water nat water 18.015 87 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;AQGQRNTMEARFLNRNMKHPQEGQPLELECMPFNIDNGVSWIRQDKDGKLHFIVYISPLSRTAFPRNERTSSQFEGSKQG SSFRLVVKNFRAQDQGTYFCIANINQMLYFSSGQPAFF ; _entity_poly.pdbx_seq_one_letter_code_can ;AQGQRNTMEARFLNRNMKHPQEGQPLELECMPFNIDNGVSWIRQDKDGKLHFIVYISPLSRTAFPRNERTSSQFEGSKQG SSFRLVVKNFRAQDQGTYFCIANINQMLYFSSGQPAFF ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 GLN n 1 3 GLY n 1 4 GLN n 1 5 ARG n 1 6 ASN n 1 7 THR n 1 8 MET n 1 9 GLU n 1 10 ALA n 1 11 ARG n 1 12 PHE n 1 13 LEU n 1 14 ASN n 1 15 ARG n 1 16 ASN n 1 17 MET n 1 18 LYS n 1 19 HIS n 1 20 PRO n 1 21 GLN n 1 22 GLU n 1 23 GLY n 1 24 GLN n 1 25 PRO n 1 26 LEU n 1 27 GLU n 1 28 LEU n 1 29 GLU n 1 30 CYS n 1 31 MET n 1 32 PRO n 1 33 PHE n 1 34 ASN n 1 35 ILE n 1 36 ASP n 1 37 ASN n 1 38 GLY n 1 39 VAL n 1 40 SER n 1 41 TRP n 1 42 ILE n 1 43 ARG n 1 44 GLN n 1 45 ASP n 1 46 LYS n 1 47 ASP n 1 48 GLY n 1 49 LYS n 1 50 LEU n 1 51 HIS n 1 52 PHE n 1 53 ILE n 1 54 VAL n 1 55 TYR n 1 56 ILE n 1 57 SER n 1 58 PRO n 1 59 LEU n 1 60 SER n 1 61 ARG n 1 62 THR n 1 63 ALA n 1 64 PHE n 1 65 PRO n 1 66 ARG n 1 67 ASN n 1 68 GLU n 1 69 ARG n 1 70 THR n 1 71 SER n 1 72 SER n 1 73 GLN n 1 74 PHE n 1 75 GLU n 1 76 GLY n 1 77 SER n 1 78 LYS n 1 79 GLN n 1 80 GLY n 1 81 SER n 1 82 SER n 1 83 PHE n 1 84 ARG n 1 85 LEU n 1 86 VAL n 1 87 VAL n 1 88 LYS n 1 89 ASN n 1 90 PHE n 1 91 ARG n 1 92 ALA n 1 93 GLN n 1 94 ASP n 1 95 GLN n 1 96 GLY n 1 97 THR n 1 98 TYR n 1 99 PHE n 1 100 CYS n 1 101 ILE n 1 102 ALA n 1 103 ASN n 1 104 ILE n 1 105 ASN n 1 106 GLN n 1 107 MET n 1 108 LEU n 1 109 TYR n 1 110 PHE n 1 111 SER n 1 112 SER n 1 113 GLY n 1 114 GLN n 1 115 PRO n 1 116 ALA n 1 117 PHE n 1 118 PHE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 118 _entity_src_gen.gene_src_common_name Chicken _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene CD8 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Gallus gallus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9031 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q6QR64_CHICK _struct_ref.pdbx_db_accession Q6QR64 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;AQGQRNTMEARFLNRNMKHPQEGQPLELECMPFNIDNGVSWIRQDKDGKLHFIVYISPLSRTAFPRNERTSSQFEGSKQG SSFRLVVKNFRAQDQGTYFCIANINQMLYFSSGQPAFF ; _struct_ref.pdbx_align_begin 20 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5EB9 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 118 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q6QR64 _struct_ref_seq.db_align_beg 20 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 137 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 119 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5EB9 _exptl.crystals_number ? _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.57 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 52.19 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;0.2M Ammonium formate, 20% w/v Polyethylene glycol 3350 ; _exptl_crystal_grow.pdbx_pH_range 7.0-7.3 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RIGAKU RAXIS IV++' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2012-02-11 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'NI FILTER' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54178 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source 'ROTATING ANODE' _diffrn_source.target ? _diffrn_source.type 'RIGAKU MICROMAX-007 HF' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.54178 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_synchrotron_site ? # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5EB9 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.00 _reflns.d_resolution_low 50.00 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 9518 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 97.5 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 5.0 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 20.624 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.0 _reflns_shell.d_res_low 2.07 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.824 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 78.5 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.336 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 3.3 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] -2.5802 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][2] -10.4160 _refine.aniso_B[2][3] -0.0000 _refine.aniso_B[3][3] 12.9962 _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5EB9 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.006 _refine.ls_d_res_low 23.090 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 9124 _refine.ls_number_reflns_R_free 436 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 94.50 _refine.ls_percent_reflns_R_free 4.78 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2380 _refine.ls_R_factor_R_free 0.2633 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2367 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol 43.245 _refine.solvent_model_param_ksol 0.394 _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.12 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method NONE _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 29.15 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.28 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 914 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 87 _refine_hist.number_atoms_total 1001 _refine_hist.d_res_high 2.006 _refine_hist.d_res_low 23.090 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.016 ? 947 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.364 ? 1273 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 21.254 ? 355 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.131 ? 127 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.006 ? 171 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.0058 2.2958 . . 130 2629 87.00 . . . 0.3034 . 0.2652 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.2958 2.8916 . . 142 2956 97.00 . . . 0.2999 . 0.2445 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.8916 23.0915 . . 164 3103 99.00 . . . 0.2397 . 0.2241 . . . . . . . . . . # _struct.entry_id 5EB9 _struct.title 'Crystal Structure Of Chicken CD8aa Homodimer' _struct.pdbx_descriptor 'CD8 alpha chain' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 5EB9 _struct_keywords.text 'CD8, Co-receptor, Immunology, IMMUNE SYSTEM' _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ARG A 69 ? GLN A 73 ? ARG A 70 GLN A 74 1 ? 5 HELX_P HELX_P2 AA2 ARG A 91 ? GLN A 95 ? ARG A 92 GLN A 96 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id disulf1 _struct_conn.conn_type_id disulf _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 30 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 100 _struct_conn.ptnr2_label_atom_id SG _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 31 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 101 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 2.060 _struct_conn.pdbx_value_order ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 5 ? AA3 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA3 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLU A 9 ? PHE A 12 ? GLU A 10 PHE A 13 AA1 2 LEU A 26 ? MET A 31 ? LEU A 27 MET A 32 AA1 3 SER A 82 ? VAL A 87 ? SER A 83 VAL A 88 AA1 4 PHE A 74 ? GLN A 79 ? PHE A 75 GLN A 80 AA2 1 THR A 62 ? ALA A 63 ? THR A 63 ALA A 64 AA2 2 LEU A 50 ? ILE A 56 ? LEU A 51 ILE A 57 AA2 3 VAL A 39 ? GLN A 44 ? VAL A 40 GLN A 45 AA2 4 GLY A 96 ? ILE A 104 ? GLY A 97 ILE A 105 AA2 5 MET A 107 ? PHE A 110 ? MET A 108 PHE A 111 AA3 1 THR A 62 ? ALA A 63 ? THR A 63 ALA A 64 AA3 2 LEU A 50 ? ILE A 56 ? LEU A 51 ILE A 57 AA3 3 VAL A 39 ? GLN A 44 ? VAL A 40 GLN A 45 AA3 4 GLY A 96 ? ILE A 104 ? GLY A 97 ILE A 105 AA3 5 GLN A 114 ? ALA A 116 ? GLN A 115 ALA A 117 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ARG A 11 ? N ARG A 12 O GLU A 29 ? O GLU A 30 AA1 2 3 N CYS A 30 ? N CYS A 31 O PHE A 83 ? O PHE A 84 AA1 3 4 O ARG A 84 ? O ARG A 85 N SER A 77 ? N SER A 78 AA2 1 2 O ALA A 63 ? O ALA A 64 N TYR A 55 ? N TYR A 56 AA2 2 3 O ILE A 56 ? O ILE A 57 N VAL A 39 ? N VAL A 40 AA2 3 4 N GLN A 44 ? N GLN A 45 O THR A 97 ? O THR A 98 AA2 4 5 N ALA A 102 ? N ALA A 103 O TYR A 109 ? O TYR A 110 AA3 1 2 O ALA A 63 ? O ALA A 64 N TYR A 55 ? N TYR A 56 AA3 2 3 O ILE A 56 ? O ILE A 57 N VAL A 39 ? N VAL A 40 AA3 3 4 N GLN A 44 ? N GLN A 45 O THR A 97 ? O THR A 98 AA3 4 5 N TYR A 98 ? N TYR A 99 O GLN A 114 ? O GLN A 115 # _atom_sites.entry_id 5EB9 _atom_sites.fract_transf_matrix[1][1] 0.022046 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011486 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014223 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 2 ? ? ? A . n A 1 2 GLN 2 3 ? ? ? A . n A 1 3 GLY 3 4 ? ? ? A . n A 1 4 GLN 4 5 ? ? ? A . n A 1 5 ARG 5 6 ? ? ? A . n A 1 6 ASN 6 7 ? ? ? A . n A 1 7 THR 7 8 8 THR THR A . n A 1 8 MET 8 9 9 MET MET A . n A 1 9 GLU 9 10 10 GLU GLU A . n A 1 10 ALA 10 11 11 ALA ALA A . n A 1 11 ARG 11 12 12 ARG ARG A . n A 1 12 PHE 12 13 13 PHE PHE A . n A 1 13 LEU 13 14 14 LEU LEU A . n A 1 14 ASN 14 15 15 ASN ASN A . n A 1 15 ARG 15 16 16 ARG ARG A . n A 1 16 ASN 16 17 17 ASN ASN A . n A 1 17 MET 17 18 18 MET MET A . n A 1 18 LYS 18 19 19 LYS LYS A . n A 1 19 HIS 19 20 20 HIS HIS A . n A 1 20 PRO 20 21 21 PRO PRO A . n A 1 21 GLN 21 22 22 GLN GLN A . n A 1 22 GLU 22 23 23 GLU GLU A . n A 1 23 GLY 23 24 24 GLY GLY A . n A 1 24 GLN 24 25 25 GLN GLN A . n A 1 25 PRO 25 26 26 PRO PRO A . n A 1 26 LEU 26 27 27 LEU LEU A . n A 1 27 GLU 27 28 28 GLU GLU A . n A 1 28 LEU 28 29 29 LEU LEU A . n A 1 29 GLU 29 30 30 GLU GLU A . n A 1 30 CYS 30 31 31 CYS CYS A . n A 1 31 MET 31 32 32 MET MET A . n A 1 32 PRO 32 33 33 PRO PRO A . n A 1 33 PHE 33 34 34 PHE PHE A . n A 1 34 ASN 34 35 35 ASN ASN A . n A 1 35 ILE 35 36 36 ILE ILE A . n A 1 36 ASP 36 37 37 ASP ASP A . n A 1 37 ASN 37 38 38 ASN ASN A . n A 1 38 GLY 38 39 39 GLY GLY A . n A 1 39 VAL 39 40 40 VAL VAL A . n A 1 40 SER 40 41 41 SER SER A . n A 1 41 TRP 41 42 42 TRP TRP A . n A 1 42 ILE 42 43 43 ILE ILE A . n A 1 43 ARG 43 44 44 ARG ARG A . n A 1 44 GLN 44 45 45 GLN GLN A . n A 1 45 ASP 45 46 46 ASP ASP A . n A 1 46 LYS 46 47 47 LYS LYS A . n A 1 47 ASP 47 48 48 ASP ASP A . n A 1 48 GLY 48 49 49 GLY GLY A . n A 1 49 LYS 49 50 50 LYS LYS A . n A 1 50 LEU 50 51 51 LEU LEU A . n A 1 51 HIS 51 52 52 HIS HIS A . n A 1 52 PHE 52 53 53 PHE PHE A . n A 1 53 ILE 53 54 54 ILE ILE A . n A 1 54 VAL 54 55 55 VAL VAL A . n A 1 55 TYR 55 56 56 TYR TYR A . n A 1 56 ILE 56 57 57 ILE ILE A . n A 1 57 SER 57 58 58 SER SER A . n A 1 58 PRO 58 59 59 PRO PRO A . n A 1 59 LEU 59 60 60 LEU LEU A . n A 1 60 SER 60 61 61 SER SER A . n A 1 61 ARG 61 62 62 ARG ARG A . n A 1 62 THR 62 63 63 THR THR A . n A 1 63 ALA 63 64 64 ALA ALA A . n A 1 64 PHE 64 65 65 PHE PHE A . n A 1 65 PRO 65 66 66 PRO PRO A . n A 1 66 ARG 66 67 67 ARG ARG A . n A 1 67 ASN 67 68 68 ASN ASN A . n A 1 68 GLU 68 69 69 GLU GLU A . n A 1 69 ARG 69 70 70 ARG ARG A . n A 1 70 THR 70 71 71 THR THR A . n A 1 71 SER 71 72 72 SER SER A . n A 1 72 SER 72 73 73 SER SER A . n A 1 73 GLN 73 74 74 GLN GLN A . n A 1 74 PHE 74 75 75 PHE PHE A . n A 1 75 GLU 75 76 76 GLU GLU A . n A 1 76 GLY 76 77 77 GLY GLY A . n A 1 77 SER 77 78 78 SER SER A . n A 1 78 LYS 78 79 79 LYS LYS A . n A 1 79 GLN 79 80 80 GLN GLN A . n A 1 80 GLY 80 81 81 GLY GLY A . n A 1 81 SER 81 82 82 SER SER A . n A 1 82 SER 82 83 83 SER SER A . n A 1 83 PHE 83 84 84 PHE PHE A . n A 1 84 ARG 84 85 85 ARG ARG A . n A 1 85 LEU 85 86 86 LEU LEU A . n A 1 86 VAL 86 87 87 VAL VAL A . n A 1 87 VAL 87 88 88 VAL VAL A . n A 1 88 LYS 88 89 89 LYS LYS A . n A 1 89 ASN 89 90 90 ASN ASN A . n A 1 90 PHE 90 91 91 PHE PHE A . n A 1 91 ARG 91 92 92 ARG ARG A . n A 1 92 ALA 92 93 93 ALA ALA A . n A 1 93 GLN 93 94 94 GLN GLN A . n A 1 94 ASP 94 95 95 ASP ASP A . n A 1 95 GLN 95 96 96 GLN GLN A . n A 1 96 GLY 96 97 97 GLY GLY A . n A 1 97 THR 97 98 98 THR THR A . n A 1 98 TYR 98 99 99 TYR TYR A . n A 1 99 PHE 99 100 100 PHE PHE A . n A 1 100 CYS 100 101 101 CYS CYS A . n A 1 101 ILE 101 102 102 ILE ILE A . n A 1 102 ALA 102 103 103 ALA ALA A . n A 1 103 ASN 103 104 104 ASN ASN A . n A 1 104 ILE 104 105 105 ILE ILE A . n A 1 105 ASN 105 106 106 ASN ASN A . n A 1 106 GLN 106 107 107 GLN GLN A . n A 1 107 MET 107 108 108 MET MET A . n A 1 108 LEU 108 109 109 LEU LEU A . n A 1 109 TYR 109 110 110 TYR TYR A . n A 1 110 PHE 110 111 111 PHE PHE A . n A 1 111 SER 111 112 112 SER SER A . n A 1 112 SER 112 113 113 SER SER A . n A 1 113 GLY 113 114 114 GLY GLY A . n A 1 114 GLN 114 115 115 GLN GLN A . n A 1 115 PRO 115 116 116 PRO PRO A . n A 1 116 ALA 116 117 117 ALA ALA A . n A 1 117 PHE 117 118 118 PHE PHE A . n A 1 118 PHE 118 119 119 PHE PHE A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 201 86 HOH HOH A . B 2 HOH 2 202 26 HOH HOH A . B 2 HOH 3 203 36 HOH HOH A . B 2 HOH 4 204 32 HOH HOH A . B 2 HOH 5 205 38 HOH HOH A . B 2 HOH 6 206 82 HOH HOH A . B 2 HOH 7 207 80 HOH HOH A . B 2 HOH 8 208 46 HOH HOH A . B 2 HOH 9 209 27 HOH HOH A . B 2 HOH 10 210 9 HOH HOH A . B 2 HOH 11 211 17 HOH HOH A . B 2 HOH 12 212 40 HOH HOH A . B 2 HOH 13 213 20 HOH HOH A . B 2 HOH 14 214 84 HOH HOH A . B 2 HOH 15 215 21 HOH HOH A . B 2 HOH 16 216 51 HOH HOH A . B 2 HOH 17 217 24 HOH HOH A . B 2 HOH 18 218 35 HOH HOH A . B 2 HOH 19 219 73 HOH HOH A . B 2 HOH 20 220 7 HOH HOH A . B 2 HOH 21 221 37 HOH HOH A . B 2 HOH 22 222 19 HOH HOH A . B 2 HOH 23 223 33 HOH HOH A . B 2 HOH 24 224 72 HOH HOH A . B 2 HOH 25 225 71 HOH HOH A . B 2 HOH 26 226 50 HOH HOH A . B 2 HOH 27 227 39 HOH HOH A . B 2 HOH 28 228 42 HOH HOH A . B 2 HOH 29 229 66 HOH HOH A . B 2 HOH 30 230 23 HOH HOH A . B 2 HOH 31 231 47 HOH HOH A . B 2 HOH 32 232 55 HOH HOH A . B 2 HOH 33 233 6 HOH HOH A . B 2 HOH 34 234 18 HOH HOH A . B 2 HOH 35 235 83 HOH HOH A . B 2 HOH 36 236 30 HOH HOH A . B 2 HOH 37 237 1 HOH HOH A . B 2 HOH 38 238 8 HOH HOH A . B 2 HOH 39 239 16 HOH HOH A . B 2 HOH 40 240 3 HOH HOH A . B 2 HOH 41 241 10 HOH HOH A . B 2 HOH 42 242 44 HOH HOH A . B 2 HOH 43 243 14 HOH HOH A . B 2 HOH 44 244 25 HOH HOH A . B 2 HOH 45 245 61 HOH HOH A . B 2 HOH 46 246 22 HOH HOH A . B 2 HOH 47 247 31 HOH HOH A . B 2 HOH 48 248 87 HOH HOH A . B 2 HOH 49 249 13 HOH HOH A . B 2 HOH 50 250 53 HOH HOH A . B 2 HOH 51 251 11 HOH HOH A . B 2 HOH 52 252 59 HOH HOH A . B 2 HOH 53 253 75 HOH HOH A . B 2 HOH 54 254 4 HOH HOH A . B 2 HOH 55 255 68 HOH HOH A . B 2 HOH 56 256 81 HOH HOH A . B 2 HOH 57 257 15 HOH HOH A . B 2 HOH 58 258 52 HOH HOH A . B 2 HOH 59 259 2 HOH HOH A . B 2 HOH 60 260 29 HOH HOH A . B 2 HOH 61 261 43 HOH HOH A . B 2 HOH 62 262 49 HOH HOH A . B 2 HOH 63 263 62 HOH HOH A . B 2 HOH 64 264 5 HOH HOH A . B 2 HOH 65 265 34 HOH HOH A . B 2 HOH 66 266 54 HOH HOH A . B 2 HOH 67 267 77 HOH HOH A . B 2 HOH 68 268 28 HOH HOH A . B 2 HOH 69 269 12 HOH HOH A . B 2 HOH 70 270 58 HOH HOH A . B 2 HOH 71 271 63 HOH HOH A . B 2 HOH 72 272 45 HOH HOH A . B 2 HOH 73 273 64 HOH HOH A . B 2 HOH 74 274 85 HOH HOH A . B 2 HOH 75 275 69 HOH HOH A . B 2 HOH 76 276 57 HOH HOH A . B 2 HOH 77 277 41 HOH HOH A . B 2 HOH 78 278 76 HOH HOH A . B 2 HOH 79 279 79 HOH HOH A . B 2 HOH 80 280 70 HOH HOH A . B 2 HOH 81 281 78 HOH HOH A . B 2 HOH 82 282 48 HOH HOH A . B 2 HOH 83 283 56 HOH HOH A . B 2 HOH 84 284 67 HOH HOH A . B 2 HOH 85 285 60 HOH HOH A . B 2 HOH 86 286 65 HOH HOH A . B 2 HOH 87 287 74 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1660 ? 1 MORE -15 ? 1 'SSA (A^2)' 11720 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_555 x,-y,-z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2016-09-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_refine_tls.id 1 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 9.1859 _pdbx_refine_tls.origin_y 11.3681 _pdbx_refine_tls.origin_z 3.5294 _pdbx_refine_tls.T[1][1] 0.2314 _pdbx_refine_tls.T[1][1]_esd ? _pdbx_refine_tls.T[1][2] -0.0058 _pdbx_refine_tls.T[1][2]_esd ? _pdbx_refine_tls.T[1][3] -0.0138 _pdbx_refine_tls.T[1][3]_esd ? _pdbx_refine_tls.T[2][2] 0.2204 _pdbx_refine_tls.T[2][2]_esd ? _pdbx_refine_tls.T[2][3] -0.0123 _pdbx_refine_tls.T[2][3]_esd ? _pdbx_refine_tls.T[3][3] 0.2220 _pdbx_refine_tls.T[3][3]_esd ? _pdbx_refine_tls.L[1][1] 0.1937 _pdbx_refine_tls.L[1][1]_esd ? _pdbx_refine_tls.L[1][2] -0.1356 _pdbx_refine_tls.L[1][2]_esd ? _pdbx_refine_tls.L[1][3] -0.1061 _pdbx_refine_tls.L[1][3]_esd ? _pdbx_refine_tls.L[2][2] 0.3569 _pdbx_refine_tls.L[2][2]_esd ? _pdbx_refine_tls.L[2][3] -0.0231 _pdbx_refine_tls.L[2][3]_esd ? _pdbx_refine_tls.L[3][3] 0.2493 _pdbx_refine_tls.L[3][3]_esd ? _pdbx_refine_tls.S[1][1] 0.0360 _pdbx_refine_tls.S[1][1]_esd ? _pdbx_refine_tls.S[1][2] -0.0504 _pdbx_refine_tls.S[1][2]_esd ? _pdbx_refine_tls.S[1][3] -0.0563 _pdbx_refine_tls.S[1][3]_esd ? _pdbx_refine_tls.S[2][1] 0.1122 _pdbx_refine_tls.S[2][1]_esd ? _pdbx_refine_tls.S[2][2] -0.0518 _pdbx_refine_tls.S[2][2]_esd ? _pdbx_refine_tls.S[2][3] 0.0716 _pdbx_refine_tls.S[2][3]_esd ? _pdbx_refine_tls.S[3][1] -0.1218 _pdbx_refine_tls.S[3][1]_esd ? _pdbx_refine_tls.S[3][2] 0.0185 _pdbx_refine_tls.S[3][2]_esd ? _pdbx_refine_tls.S[3][3] 0.0136 _pdbx_refine_tls.S[3][3]_esd ? # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.beg_auth_asym_id ? _pdbx_refine_tls_group.beg_auth_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id ? _pdbx_refine_tls_group.end_auth_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details all # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 3 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.52 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OE1 A GLU 69 ? ? N A SER 72 ? ? 1.69 2 1 O A HOH 264 ? ? O A HOH 268 ? ? 1.81 3 1 NE2 A GLN 94 ? ? O A HOH 201 ? ? 1.86 4 1 O A ARG 67 ? ? O A HOH 202 ? ? 1.87 5 1 CG A GLN 94 ? ? O A HOH 201 ? ? 1.88 6 1 O A HOH 255 ? ? O A HOH 256 ? ? 1.91 7 1 O A MET 32 ? ? O A HOH 203 ? ? 1.92 8 1 O A HOH 284 ? ? O A HOH 286 ? ? 2.03 9 1 O A HOH 265 ? ? O A HOH 279 ? ? 2.04 10 1 O A HOH 277 ? ? O A HOH 282 ? ? 2.05 11 1 O A HOH 266 ? ? O A HOH 280 ? ? 2.06 12 1 O A HOH 235 ? ? O A HOH 271 ? ? 2.07 13 1 O A HOH 232 ? ? O A HOH 261 ? ? 2.14 14 1 O A PHE 75 ? ? O A HOH 204 ? ? 2.15 15 1 CB A CYS 31 ? ? SG A CYS 101 ? ? 2.16 16 1 CD A GLN 94 ? ? O A HOH 201 ? ? 2.17 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A HOH 208 ? ? 1_555 O A HOH 221 ? ? 8_555 1.81 2 1 O A HOH 276 ? ? 1_555 O A HOH 287 ? ? 8_555 1.97 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CB _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 GLN _pdbx_validate_rmsd_bond.auth_seq_id_1 22 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 CG _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 GLN _pdbx_validate_rmsd_bond.auth_seq_id_2 22 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.349 _pdbx_validate_rmsd_bond.bond_target_value 1.521 _pdbx_validate_rmsd_bond.bond_deviation -0.172 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.027 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 37 ? ? 33.02 24.89 2 1 ASP A 48 ? ? -31.91 -37.75 3 1 SER A 82 ? ? 82.07 -23.69 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ALA 2 ? A ALA 1 2 1 Y 1 A GLN 3 ? A GLN 2 3 1 Y 1 A GLY 4 ? A GLY 3 4 1 Y 1 A GLN 5 ? A GLN 4 5 1 Y 1 A ARG 6 ? A ARG 5 6 1 Y 1 A ASN 7 ? A ASN 6 # _pdbx_audit_support.funding_organization '973 Project' _pdbx_audit_support.country China _pdbx_audit_support.grant_number 2013CB835302 _pdbx_audit_support.ordinal 1 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #