data_5EBI # _entry.id 5EBI # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5EBI pdb_00005ebi 10.2210/pdb5ebi/pdb WWPDB D_1000209123 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-02-10 2 'Structure model' 1 1 2016-03-02 3 'Structure model' 1 2 2018-08-08 4 'Structure model' 1 3 2024-01-10 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' pdbx_related_exp_data_set 2 4 'Structure model' chem_comp_atom 3 4 'Structure model' chem_comp_bond 4 4 'Structure model' database_2 5 4 'Structure model' pdbx_initial_refinement_model 6 4 'Structure model' pdbx_struct_conn_angle 7 4 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_pdbx_related_exp_data_set.data_reference' 2 3 'Structure model' '_pdbx_related_exp_data_set.metadata_reference' 3 4 'Structure model' '_database_2.pdbx_DOI' 4 4 'Structure model' '_database_2.pdbx_database_accession' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_alt_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_symmetry' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_symmetry' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 20 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 21 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_alt_id' 22 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 23 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 24 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 25 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 26 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry' 27 4 'Structure model' '_pdbx_struct_conn_angle.value' 28 4 'Structure model' '_struct_conn.pdbx_dist_value' 29 4 'Structure model' '_struct_conn.pdbx_ptnr1_label_alt_id' 30 4 'Structure model' '_struct_conn.pdbx_ptnr2_label_alt_id' 31 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 32 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 33 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 34 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 35 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 36 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 37 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 38 4 'Structure model' '_struct_conn.ptnr1_symmetry' 39 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 40 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 41 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 42 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 43 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 44 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 45 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 46 4 'Structure model' '_struct_conn.ptnr2_symmetry' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5EBI _pdbx_database_status.recvd_initial_deposition_date 2015-10-19 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.content_type unspecified _pdbx_database_related.db_id 3P4J _pdbx_database_related.db_name PDB _pdbx_database_related.details 'nucleic acid, Z-DNA' # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Gilski, M.' 1 ? 'Drozdzal, P.' 2 ? 'Kierzek, R.' 3 ? 'Jaskolski, M.' 4 ? # loop_ _citation.abstract _citation.abstract_id_CAS _citation.book_id_ISBN _citation.book_publisher _citation.book_publisher_city _citation.book_title _citation.coordinate_linkage _citation.country _citation.database_id_Medline _citation.details _citation.id _citation.journal_abbrev _citation.journal_id_ASTM _citation.journal_id_CSD _citation.journal_id_ISSN _citation.journal_full _citation.journal_issue _citation.journal_volume _citation.language _citation.page_first _citation.page_last _citation.title _citation.year _citation.database_id_CSD _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.unpublished_flag ? ? ? ? ? ? ? ? ? ? primary 'Acta Crystallogr D Struct Biol' ? ? 2059-7983 ? ? 72 ? 211 223 ;Atomic resolution structure of a chimeric DNA-RNA Z-type duplex in complex with Ba(2+) ions: a case of complicated multi-domain twinning. ; 2016 ? 10.1107/S2059798315024365 26894669 ? ? ? ? ? ? ? ? US ? ? 1 'Acta Crystallogr. D Biol. Crystallogr.' ABCRE6 ? 1399-0047 ? ? 69 ? 1180 1190 'Ultrahigh-resolution crystal structures of Z-DNA in complex with Mn(2+) and Zn(2+) ions.' 2013 ? 10.1107/S0907444913007798 23695262 ? ? ? ? ? ? ? ? GW ? ? 2 'J. Biol. Inorg. Chem.' JJBCFA ? 1432-1327 ? ? 20 ? 595 602 'High-resolution crystal structure of Z-DNA in complex with Cr(3+) cations.' 2015 ? 10.1007/s00775-015-1247-5 25687556 ? ? ? ? ? ? ? ? US ? ? 3 Biochemistry BICHAW 0033 0006-2960 ? ? 28 ? 4923 4928 ;Effects of the O2' hydroxyl group on Z-DNA conformation: structure of Z-RNA and (araC)-[Z-DNA]. ; 1989 ? ? 2475172 ? ? ? ? ? ? ? ? DK ? ? 4 'Acta Crystallogr. D Biol. Crystallogr.' ABCRE6 0766 0907-4449 ? ? 58 ? 120 123 ;Crystallization of the Zalpha domain of the human editing enzyme ADAR1 complexed with a DNA-RNA chimeric oligonucleotide in the left-handed Z-conformation. ; 2002 ? ? 11752786 ? ? ? ? ? ? ? ? UK ? ? 5 'Nucleic Acids Res.' NARHAD 0389 1362-4962 ? ? 39 ? 6238 6248 'High regularity of Z-DNA revealed by ultra high-resolution crystal structure at 0.55 A.' 2011 ? 10.1093/nar/gkr202 21459852 ? ? ? ? ? ? ? ? DK ? ? 6 'Acta Crystallogr. D Biol. Crystallogr.' ABCRE6 0766 0907-4449 ? ? 63 ? 149 159 ;Structure determination by multiwavelength anomalous diffraction of aclacinomycin oxidoreductase: indications of multidomain pseudomerohedral twinning. ; 2007 ? ? 17242508 ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Gilski, M.' 1 ? primary 'Drozdzal, P.' 2 ? primary 'Kierzek, R.' 3 ? primary 'Jaskolski, M.' 4 ? 1 'Drozdzal, P.' 5 ? 1 'Gilski, M.' 6 ? 1 'Kierzek, R.' 7 ? 1 'Lomozik, L.' 8 ? 1 'Jaskolski, M.' 9 ? 2 'Drozdzal, P.' 10 ? 2 'Gilski, M.' 11 ? 2 'Kierzek, R.' 12 ? 2 'Lomozik, L.' 13 ? 2 'Jaskolski, M.' 14 ? 3 'Teng, M.K.' 15 ? 3 'Liaw, Y.C.' 16 ? 3 'van der Marel, G.A.' 17 ? 3 'van Boom, J.H.' 18 ? 3 'Wang, A.H.' 19 ? 4 'Brown, B.A.' 20 ? 4 'Athanasiadis, A.' 21 ? 4 'Hanlon, E.B.' 22 ? 4 'Lowenhaupt, K.' 23 ? 4 'Wilbert, C.M.' 24 ? 4 'Rich, A.' 25 ? 5 'Brzezinski, K.' 26 ? 5 'Brzuszkiewicz, A.' 27 ? 5 'Dauter, M.' 28 ? 5 'Kubicki, M.' 29 ? 5 'Jaskolski, M.' 30 ? 5 'Dauter, Z.' 31 ? 6 'Sultana, A.' 32 ? 6 'Alexeev, I.' 33 ? 6 'Kursula, I.' 34 ? 6 'Mantsala, P.' 35 ? 6 'Niemi, J.' 36 ? 6 'Schneider, G.' 37 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA/RNA (5'-D(*C)-R(P*G)-D(P*C)-R(P*G)-D(P*C)-R(P*G)-3') ; 1858.205 8 ? ? ? ? 2 non-polymer syn 'BARIUM ION' 137.327 16 ? ? ? ? 3 water nat water 18.015 224 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polydeoxyribonucleotide/polyribonucleotide hybrid' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DC)G(DC)G(DC)G' _entity_poly.pdbx_seq_one_letter_code_can CGCGCG _entity_poly.pdbx_strand_id A,B,C,D,E,F,G,H _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'BARIUM ION' BA 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 G n 1 3 DC n 1 4 G n 1 5 DC n 1 6 G n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight BA non-polymer . 'BARIUM ION' ? 'Ba 2' 137.327 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 HOH non-polymer . WATER ? 'H2 O' 18.015 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC DC A . n A 1 2 G 2 2 2 G G A . n A 1 3 DC 3 3 3 DC DC A . n A 1 4 G 4 4 4 G G A . n A 1 5 DC 5 5 5 DC DC A . n A 1 6 G 6 6 6 G G A . n B 1 1 DC 1 7 7 DC DC B . n B 1 2 G 2 8 8 G G B . n B 1 3 DC 3 9 9 DC DC B . n B 1 4 G 4 10 10 G G B . n B 1 5 DC 5 11 11 DC DC B . n B 1 6 G 6 12 12 G G B . n C 1 1 DC 1 1 1 DC DC C . n C 1 2 G 2 2 2 G G C . n C 1 3 DC 3 3 3 DC DC C . n C 1 4 G 4 4 4 G G C . n C 1 5 DC 5 5 5 DC DC C . n C 1 6 G 6 6 6 G G C . n D 1 1 DC 1 7 7 DC DC D . n D 1 2 G 2 8 8 G G D . n D 1 3 DC 3 9 9 DC DC D . n D 1 4 G 4 10 10 G G D . n D 1 5 DC 5 11 11 DC DC D . n D 1 6 G 6 12 12 G G D . n E 1 1 DC 1 1 1 DC DC E . n E 1 2 G 2 2 2 G G E . n E 1 3 DC 3 3 3 DC DC E . n E 1 4 G 4 4 4 G G E . n E 1 5 DC 5 5 5 DC DC E . n E 1 6 G 6 6 6 G G E . n F 1 1 DC 1 7 7 DC DC F . n F 1 2 G 2 8 8 G G F . n F 1 3 DC 3 9 9 DC DC F . n F 1 4 G 4 10 10 G G F . n F 1 5 DC 5 11 11 DC DC F . n F 1 6 G 6 12 12 G G F . n G 1 1 DC 1 1 1 DC DC G . n G 1 2 G 2 2 2 G G G . n G 1 3 DC 3 3 3 DC DC G . n G 1 4 G 4 4 4 G G G . n G 1 5 DC 5 5 5 DC DC G . n G 1 6 G 6 6 6 G G G . n H 1 1 DC 1 7 7 DC DC H . n H 1 2 G 2 8 8 G G H . n H 1 3 DC 3 9 9 DC DC H . n H 1 4 G 4 10 10 G G H . n H 1 5 DC 5 11 11 DC DC H . n H 1 6 G 6 12 12 G G H . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code I 2 BA 1 101 1 BA BA A . J 2 BA 1 102 2 BA BA A . K 2 BA 1 103 4 BA BA A . L 2 BA 1 104 6 BA BA A . M 2 BA 1 105 7 BA BA A . N 2 BA 1 106 8 BA BA A . O 2 BA 1 101 3 BA BA B . P 2 BA 1 101 12 BA BA C . Q 2 BA 1 102 15 BA BA C . R 2 BA 1 101 9 BA BA D . S 2 BA 1 102 13 BA BA D . T 2 BA 1 101 5 BA BA F . U 2 BA 1 102 10 BA BA F . V 2 BA 1 103 11 BA BA F . W 2 BA 1 101 16 BA BA G . X 2 BA 1 101 14 BA BA H . Y 3 HOH 1 201 103 HOH HOH A . Y 3 HOH 2 202 60 HOH HOH A . Y 3 HOH 3 203 198 HOH HOH A . Y 3 HOH 4 204 111 HOH HOH A . Y 3 HOH 5 205 156 HOH HOH A . Y 3 HOH 6 206 116 HOH HOH A . Y 3 HOH 7 207 92 HOH HOH A . Y 3 HOH 8 208 9 HOH HOH A . Y 3 HOH 9 209 59 HOH HOH A . Y 3 HOH 10 210 11 HOH HOH A . Y 3 HOH 11 211 76 HOH HOH A . Y 3 HOH 12 212 129 HOH HOH A . Y 3 HOH 13 213 13 HOH HOH A . Y 3 HOH 14 214 214 HOH HOH A . Y 3 HOH 15 215 27 HOH HOH A . Y 3 HOH 16 216 147 HOH HOH A . Y 3 HOH 17 217 87 HOH HOH A . Y 3 HOH 18 218 230 HOH HOH A . Y 3 HOH 19 219 220 HOH HOH A . Y 3 HOH 20 220 14 HOH HOH A . Y 3 HOH 21 221 163 HOH HOH A . Y 3 HOH 22 222 109 HOH HOH A . Y 3 HOH 23 223 196 HOH HOH A . Y 3 HOH 24 224 62 HOH HOH A . Y 3 HOH 25 225 40 HOH HOH A . Y 3 HOH 26 226 158 HOH HOH A . Y 3 HOH 27 227 65 HOH HOH A . Y 3 HOH 28 228 82 HOH HOH A . Y 3 HOH 29 229 182 HOH HOH A . Y 3 HOH 30 230 213 HOH HOH A . Y 3 HOH 31 231 140 HOH HOH A . Z 3 HOH 1 201 168 HOH HOH B . Z 3 HOH 2 202 124 HOH HOH B . Z 3 HOH 3 203 45 HOH HOH B . Z 3 HOH 4 204 49 HOH HOH B . Z 3 HOH 5 205 89 HOH HOH B . Z 3 HOH 6 206 78 HOH HOH B . Z 3 HOH 7 207 24 HOH HOH B . Z 3 HOH 8 208 153 HOH HOH B . Z 3 HOH 9 209 176 HOH HOH B . Z 3 HOH 10 210 204 HOH HOH B . Z 3 HOH 11 211 177 HOH HOH B . Z 3 HOH 12 212 192 HOH HOH B . Z 3 HOH 13 213 216 HOH HOH B . Z 3 HOH 14 214 63 HOH HOH B . Z 3 HOH 15 215 148 HOH HOH B . Z 3 HOH 16 216 154 HOH HOH B . Z 3 HOH 17 217 201 HOH HOH B . Z 3 HOH 18 218 157 HOH HOH B . Z 3 HOH 19 219 119 HOH HOH B . Z 3 HOH 20 220 98 HOH HOH B . AA 3 HOH 1 201 171 HOH HOH C . AA 3 HOH 2 202 141 HOH HOH C . AA 3 HOH 3 203 130 HOH HOH C . AA 3 HOH 4 204 30 HOH HOH C . AA 3 HOH 5 205 173 HOH HOH C . AA 3 HOH 6 206 88 HOH HOH C . AA 3 HOH 7 207 112 HOH HOH C . AA 3 HOH 8 208 22 HOH HOH C . AA 3 HOH 9 209 20 HOH HOH C . AA 3 HOH 10 210 186 HOH HOH C . AA 3 HOH 11 211 172 HOH HOH C . AA 3 HOH 12 212 99 HOH HOH C . AA 3 HOH 13 213 194 HOH HOH C . AA 3 HOH 14 214 199 HOH HOH C . AA 3 HOH 15 215 26 HOH HOH C . AA 3 HOH 16 216 48 HOH HOH C . AA 3 HOH 17 217 135 HOH HOH C . AA 3 HOH 18 218 121 HOH HOH C . AA 3 HOH 19 219 66 HOH HOH C . AA 3 HOH 20 220 51 HOH HOH C . AA 3 HOH 21 221 10 HOH HOH C . AA 3 HOH 22 222 25 HOH HOH C . AA 3 HOH 23 223 57 HOH HOH C . AA 3 HOH 24 224 179 HOH HOH C . AA 3 HOH 25 225 97 HOH HOH C . AA 3 HOH 26 226 43 HOH HOH C . AA 3 HOH 27 227 167 HOH HOH C . AA 3 HOH 28 228 85 HOH HOH C . AA 3 HOH 29 229 108 HOH HOH C . AA 3 HOH 30 230 71 HOH HOH C . BA 3 HOH 1 201 203 HOH HOH D . BA 3 HOH 2 202 150 HOH HOH D . BA 3 HOH 3 203 190 HOH HOH D . BA 3 HOH 4 204 149 HOH HOH D . BA 3 HOH 5 205 232 HOH HOH D . BA 3 HOH 6 206 80 HOH HOH D . BA 3 HOH 7 207 123 HOH HOH D . BA 3 HOH 8 208 21 HOH HOH D . BA 3 HOH 9 209 41 HOH HOH D . BA 3 HOH 10 210 93 HOH HOH D . BA 3 HOH 11 211 195 HOH HOH D . BA 3 HOH 12 212 46 HOH HOH D . BA 3 HOH 13 213 96 HOH HOH D . BA 3 HOH 14 214 210 HOH HOH D . BA 3 HOH 15 215 197 HOH HOH D . BA 3 HOH 16 216 175 HOH HOH D . BA 3 HOH 17 217 5 HOH HOH D . BA 3 HOH 18 218 19 HOH HOH D . BA 3 HOH 19 219 91 HOH HOH D . BA 3 HOH 20 220 183 HOH HOH D . BA 3 HOH 21 221 222 HOH HOH D . BA 3 HOH 22 222 191 HOH HOH D . BA 3 HOH 23 223 162 HOH HOH D . BA 3 HOH 24 224 47 HOH HOH D . BA 3 HOH 25 225 1 HOH HOH D . BA 3 HOH 26 226 90 HOH HOH D . BA 3 HOH 27 227 64 HOH HOH D . BA 3 HOH 28 228 145 HOH HOH D . CA 3 HOH 1 201 133 HOH HOH E . CA 3 HOH 2 202 15 HOH HOH E . CA 3 HOH 3 203 81 HOH HOH E . CA 3 HOH 4 204 101 HOH HOH E . CA 3 HOH 5 205 83 HOH HOH E . CA 3 HOH 6 206 161 HOH HOH E . CA 3 HOH 7 207 73 HOH HOH E . CA 3 HOH 8 208 170 HOH HOH E . CA 3 HOH 9 209 36 HOH HOH E . CA 3 HOH 10 210 159 HOH HOH E . CA 3 HOH 11 211 144 HOH HOH E . CA 3 HOH 12 212 185 HOH HOH E . CA 3 HOH 13 213 110 HOH HOH E . CA 3 HOH 14 214 105 HOH HOH E . CA 3 HOH 15 215 54 HOH HOH E . CA 3 HOH 16 216 142 HOH HOH E . CA 3 HOH 17 217 134 HOH HOH E . CA 3 HOH 18 218 188 HOH HOH E . CA 3 HOH 19 219 34 HOH HOH E . CA 3 HOH 20 220 77 HOH HOH E . CA 3 HOH 21 221 206 HOH HOH E . CA 3 HOH 22 222 187 HOH HOH E . CA 3 HOH 23 223 169 HOH HOH E . CA 3 HOH 24 224 118 HOH HOH E . CA 3 HOH 25 225 23 HOH HOH E . CA 3 HOH 26 226 37 HOH HOH E . CA 3 HOH 27 227 231 HOH HOH E . CA 3 HOH 28 228 166 HOH HOH E . CA 3 HOH 29 229 200 HOH HOH E . CA 3 HOH 30 230 16 HOH HOH E . CA 3 HOH 31 231 113 HOH HOH E . CA 3 HOH 32 232 122 HOH HOH E . CA 3 HOH 33 233 2 HOH HOH E . CA 3 HOH 34 234 52 HOH HOH E . CA 3 HOH 35 235 229 HOH HOH E . CA 3 HOH 36 236 212 HOH HOH E . DA 3 HOH 1 201 72 HOH HOH F . DA 3 HOH 2 202 227 HOH HOH F . DA 3 HOH 3 203 181 HOH HOH F . DA 3 HOH 4 204 115 HOH HOH F . DA 3 HOH 5 205 4 HOH HOH F . DA 3 HOH 6 206 8 HOH HOH F . DA 3 HOH 7 207 55 HOH HOH F . DA 3 HOH 8 208 127 HOH HOH F . DA 3 HOH 9 209 139 HOH HOH F . DA 3 HOH 10 210 218 HOH HOH F . DA 3 HOH 11 211 32 HOH HOH F . DA 3 HOH 12 212 211 HOH HOH F . DA 3 HOH 13 213 225 HOH HOH F . DA 3 HOH 14 214 178 HOH HOH F . DA 3 HOH 15 215 151 HOH HOH F . DA 3 HOH 16 216 39 HOH HOH F . DA 3 HOH 17 217 67 HOH HOH F . DA 3 HOH 18 218 79 HOH HOH F . DA 3 HOH 19 219 61 HOH HOH F . DA 3 HOH 20 220 102 HOH HOH F . DA 3 HOH 21 221 207 HOH HOH F . EA 3 HOH 1 201 18 HOH HOH G . EA 3 HOH 2 202 128 HOH HOH G . EA 3 HOH 3 203 221 HOH HOH G . EA 3 HOH 4 204 42 HOH HOH G . EA 3 HOH 5 205 100 HOH HOH G . EA 3 HOH 6 206 84 HOH HOH G . EA 3 HOH 7 207 74 HOH HOH G . EA 3 HOH 8 208 38 HOH HOH G . EA 3 HOH 9 209 29 HOH HOH G . EA 3 HOH 10 210 215 HOH HOH G . EA 3 HOH 11 211 184 HOH HOH G . EA 3 HOH 12 212 137 HOH HOH G . EA 3 HOH 13 213 53 HOH HOH G . EA 3 HOH 14 214 104 HOH HOH G . EA 3 HOH 15 215 106 HOH HOH G . EA 3 HOH 16 216 50 HOH HOH G . EA 3 HOH 17 217 86 HOH HOH G . EA 3 HOH 18 218 219 HOH HOH G . EA 3 HOH 19 219 152 HOH HOH G . EA 3 HOH 20 220 138 HOH HOH G . EA 3 HOH 21 221 35 HOH HOH G . EA 3 HOH 22 222 131 HOH HOH G . EA 3 HOH 23 223 12 HOH HOH G . EA 3 HOH 24 224 120 HOH HOH G . EA 3 HOH 25 225 164 HOH HOH G . EA 3 HOH 26 226 33 HOH HOH G . EA 3 HOH 27 227 180 HOH HOH G . EA 3 HOH 28 228 208 HOH HOH G . EA 3 HOH 29 229 70 HOH HOH G . EA 3 HOH 30 230 125 HOH HOH G . EA 3 HOH 31 231 146 HOH HOH G . EA 3 HOH 32 232 95 HOH HOH G . EA 3 HOH 33 233 193 HOH HOH G . EA 3 HOH 34 234 75 HOH HOH G . EA 3 HOH 35 235 226 HOH HOH G . FA 3 HOH 1 201 155 HOH HOH H . FA 3 HOH 2 202 94 HOH HOH H . FA 3 HOH 3 203 132 HOH HOH H . FA 3 HOH 4 204 114 HOH HOH H . FA 3 HOH 5 205 3 HOH HOH H . FA 3 HOH 6 206 174 HOH HOH H . FA 3 HOH 7 207 7 HOH HOH H . FA 3 HOH 8 208 56 HOH HOH H . FA 3 HOH 9 209 217 HOH HOH H . FA 3 HOH 10 210 126 HOH HOH H . FA 3 HOH 11 211 205 HOH HOH H . FA 3 HOH 12 212 202 HOH HOH H . FA 3 HOH 13 213 209 HOH HOH H . FA 3 HOH 14 214 31 HOH HOH H . FA 3 HOH 15 215 223 HOH HOH H . FA 3 HOH 16 216 189 HOH HOH H . FA 3 HOH 17 217 6 HOH HOH H . FA 3 HOH 18 218 44 HOH HOH H . FA 3 HOH 19 219 68 HOH HOH H . FA 3 HOH 20 220 224 HOH HOH H . FA 3 HOH 21 221 107 HOH HOH H . FA 3 HOH 22 222 58 HOH HOH H . FA 3 HOH 23 223 69 HOH HOH H . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0131 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 119.98 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 5EBI _cell.details ? _cell.formula_units_Z ? _cell.length_a 35.720 _cell.length_a_esd ? _cell.length_b 44.100 _cell.length_b_esd ? _cell.length_c 35.720 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 16 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5EBI _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5EBI _exptl.crystals_number ? _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.65 _exptl_crystal.density_percent_sol 25.44 _exptl_crystal.description ? _exptl_crystal.preparation ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ;A 1.5 MM WATER SOLUTION OF DNA-RNA MIXED 1:1 V/V WITH 10% MPD, 12 MM SPERMINE*4HCL, 80 MM NACL, 20 MM BACL2, 40 MM SODIUM CACODYLATE AND EQUILIBRATED AGAINST 35% MPD, PH 6.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 292.0K ; _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.pdbx_details ;A 1.5 MM WATER SOLUTION OF DNA-RNA MIXED 1:1 V/V WITH 10% MPD, 12 MM SPERMINE*4HCL, 80 MM NACL, 20 MM BACL2, 40 MM SODIUM CACODYLATE AND EQUILIBRATED AGAINST 35% MPD, PH 6.0 ; _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 292 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RAYONIX MX-225' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2012-09-08 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Double crystal Si (111) Channel' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.8266 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'BESSY BEAMLINE 14.2' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.8266 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 14.2 _diffrn_source.pdbx_synchrotron_site BESSY # _reflns.B_iso_Wilson_estimate 11.719 _reflns.entry_id 5EBI _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.09 _reflns.d_resolution_low 30.94 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all 40052 _reflns.number_obs 40052 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.4 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 5.84 _reflns.pdbx_Rmerge_I_obs 0.071 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 13.07 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.09 _reflns_shell.d_res_low 1.12 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 3.12 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 99.5 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.375 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 3.33 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 5EBI _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 40051 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 30.94 _refine.ls_d_res_high 1.09 _refine.ls_percent_reflns_obs 99.74 _refine.ls_R_factor_obs 0.11361 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.115 _refine.ls_R_factor_R_free 0.169 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 2.55 _refine.ls_number_reflns_R_free 101 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.985 _refine.correlation_coeff_Fo_to_Fc_free 0.000 _refine.B_iso_mean 11.814 _refine.aniso_B[1][1] -0.50 _refine.aniso_B[2][2] -0.49 _refine.aniso_B[3][3] 0.99 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] -13.14 _refine.aniso_B[2][3] -0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.details ;ANISOTROPIC ATOMIC DISPLACEMENT PARAMETERS WERE USED. HYDROGEN ATOMS WERE ADDED AT RIDING POSITION THE FINAL REFINEMENT WAS CALCULATED USING WEIGHTED FULL-MATRIX LEAST-SQUARES PROCEDURE AND ALL REFLECTIONS. ; _refine.pdbx_starting_model 3P4J _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'CLOWNEY, GELBIN & PARKINSON' _refine.pdbx_stereochem_target_val_spec_case 'PHOSPHATE AND GLYCOSIDIC ANGLES ACCORDING TO PDB MODEL 3P4J' _refine.pdbx_R_Free_selection_details ;Using the 'thin resolution shells' method ; _refine.pdbx_overall_ESU_R 0.006 _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.009 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 0.355 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 984 _refine_hist.pdbx_number_atoms_ligand 16 _refine_hist.number_atoms_solvent 224 _refine_hist.number_atoms_total 1224 _refine_hist.d_res_high 1.09 _refine_hist.d_res_low 30.94 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.018 0.010 ? 1159 'X-RAY DIFFRACTION' ? r_bond_other_d 0.002 0.020 ? 533 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.888 1.268 ? 1812 'X-RAY DIFFRACTION' ? r_angle_other_deg 1.698 3.000 ? 1286 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_chiral_restr 0.140 0.200 ? 194 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.015 0.020 ? 584 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.003 0.020 ? 272 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 3.648 1.105 ? 1159 'X-RAY DIFFRACTION' ? r_scbond_other 3.649 1.105 ? 1158 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_other 4.367 1.683 ? 1806 'X-RAY DIFFRACTION' ? r_long_range_B_refined 5.164 11.706 ? 1825 'X-RAY DIFFRACTION' ? r_long_range_B_other 4.391 11.046 ? 1676 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 12.445 3.000 ? 1692 'X-RAY DIFFRACTION' ? r_sphericity_free 27.212 5.000 ? 37 'X-RAY DIFFRACTION' ? r_sphericity_bonded 15.429 5.000 ? 1774 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.090 _refine_ls_shell.d_res_low 1.118 _refine_ls_shell.number_reflns_R_work 2909 _refine_ls_shell.R_factor_R_work 0.175 _refine_ls_shell.percent_reflns_obs 99.08 _refine_ls_shell.R_factor_R_free 0.211 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 101 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 5EBI _struct.title 'Crystal structure of a DNA-RNA chimera in complex with Ba2+ ions: a case of unusual multi-domain twinning' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 5EBI _struct_keywords.text ;DNA-RNA CHIMERA COMPLEX; Z-DNA; Z-RNA; SELF-COMPLEMENTARY DUPLEX; LEFT-HANDED Z-TYPE DUPLEX; MULTI-DOMAIN TWINNING; DETECTION; TWIN PSEUDOSYMMETRY, DNA-RNA CHIMERA complex ; _struct_keywords.pdbx_keywords 'DNA/RNA CHIMERA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 1 ? F N N 1 ? G N N 1 ? H N N 1 ? I N N 2 ? J N N 2 ? K N N 2 ? L N N 2 ? M N N 2 ? N N N 2 ? O N N 2 ? P N N 2 ? Q N N 2 ? R N N 2 ? S N N 2 ? T N N 2 ? U N N 2 ? V N N 2 ? W N N 2 ? X N N 2 ? Y N N 3 ? Z N N 3 ? AA N N 3 ? BA N N 3 ? CA N N 3 ? DA N N 3 ? EA N N 3 ? FA N N 3 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 5EBI _struct_ref.pdbx_db_accession 5EBI _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5EBI A 1 ? 6 ? 5EBI 1 ? 6 ? 1 6 2 1 5EBI B 1 ? 6 ? 5EBI 7 ? 12 ? 7 12 3 1 5EBI C 1 ? 6 ? 5EBI 1 ? 6 ? 1 6 4 1 5EBI D 1 ? 6 ? 5EBI 7 ? 12 ? 7 12 5 1 5EBI E 1 ? 6 ? 5EBI 1 ? 6 ? 1 6 6 1 5EBI F 1 ? 6 ? 5EBI 7 ? 12 ? 7 12 7 1 5EBI G 1 ? 6 ? 5EBI 1 ? 6 ? 1 6 8 1 5EBI H 1 ? 6 ? 5EBI 7 ? 12 ? 7 12 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 software_defined_assembly PISA dimeric 2 2 software_defined_assembly PISA dimeric 2 3 software_defined_assembly PISA dimeric 2 4 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1030 ? 1 MORE -24 ? 1 'SSA (A^2)' 2860 ? 2 'ABSA (A^2)' 1030 ? 2 MORE -23 ? 2 'SSA (A^2)' 2840 ? 3 'ABSA (A^2)' 1060 ? 3 MORE -27 ? 3 'SSA (A^2)' 2840 ? 4 'ABSA (A^2)' 1050 ? 4 MORE -27 ? 4 'SSA (A^2)' 2840 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,I,J,K,L,M,N,O,Y,Z 2 1 C,D,P,Q,R,S,AA,BA 3 1 E,F,T,U,V,CA,DA 4 1 G,H,W,X,EA,FA # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A DC 3 OP2 A ? ? 1_555 J BA . BA ? ? A DC 3 A BA 102 1_555 ? ? ? ? ? ? ? 2.862 ? ? metalc2 metalc ? ? A DC 3 OP1 B ? ? 1_555 L BA . BA ? ? A DC 3 A BA 104 1_555 ? ? ? ? ? ? ? 2.983 ? ? metalc3 metalc ? ? A G 4 O6 ? ? ? 1_555 L BA . BA ? ? A G 4 A BA 104 1_555 ? ? ? ? ? ? ? 2.681 ? ? metalc4 metalc ? ? A G 6 O6 ? ? ? 1_555 K BA . BA ? ? A G 6 A BA 103 1_555 ? ? ? ? ? ? ? 2.668 ? ? metalc5 metalc ? ? I BA . BA ? ? ? 1_555 Y HOH . O ? ? A BA 101 A HOH 223 1_555 ? ? ? ? ? ? ? 3.034 ? ? metalc6 metalc ? ? I BA . BA ? ? ? 1_555 Y HOH . O ? ? A BA 101 A HOH 228 1_555 ? ? ? ? ? ? ? 3.093 ? ? metalc7 metalc ? ? I BA . BA ? ? ? 1_555 Z HOH . O ? ? A BA 101 B HOH 202 2_655 ? ? ? ? ? ? ? 2.935 ? ? metalc8 metalc ? ? I BA . BA ? ? ? 1_555 Z HOH . O ? ? A BA 101 B HOH 217 2_655 ? ? ? ? ? ? ? 2.947 ? ? metalc9 metalc ? ? I BA . BA ? ? ? 1_555 EA HOH . O ? ? A BA 101 G HOH 211 1_554 ? ? ? ? ? ? ? 2.935 ? ? metalc10 metalc ? ? J BA . BA ? ? ? 1_555 Y HOH . O ? ? A BA 102 A HOH 202 1_555 ? ? ? ? ? ? ? 2.858 ? ? metalc11 metalc ? ? J BA . BA ? ? ? 1_555 Y HOH . O ? ? A BA 102 A HOH 203 1_555 ? ? ? ? ? ? ? 2.808 ? ? metalc12 metalc ? ? J BA . BA ? ? ? 1_555 Y HOH . O ? ? A BA 102 A HOH 209 1_555 ? ? ? ? ? ? ? 2.826 ? ? metalc13 metalc ? ? J BA . BA ? ? ? 1_555 E DC 5 OP1 ? ? A BA 102 E DC 5 1_555 ? ? ? ? ? ? ? 2.801 ? ? metalc14 metalc ? ? J BA . BA ? ? ? 1_555 CA HOH . O ? ? A BA 102 E HOH 208 1_555 ? ? ? ? ? ? ? 2.879 ? ? metalc15 metalc ? ? L BA . BA ? ? ? 1_555 Y HOH . O ? ? A BA 104 A HOH 220 1_555 ? ? ? ? ? ? ? 2.556 ? ? metalc16 metalc ? ? L BA . BA ? ? ? 1_555 FA HOH . O ? ? A BA 104 H HOH 218 1_554 ? ? ? ? ? ? ? 3.473 ? ? metalc17 metalc ? ? M BA . BA ? ? ? 1_555 Y HOH . O ? ? A BA 105 A HOH 220 1_555 ? ? ? ? ? ? ? 2.952 ? ? metalc18 metalc ? ? M BA . BA ? ? ? 1_555 EA HOH . O ? ? A BA 105 G HOH 213 1_554 ? ? ? ? ? ? ? 3.169 ? ? metalc19 metalc ? ? M BA . BA ? ? ? 2_555 H G 6 O6 ? ? A BA 105 H G 12 1_555 ? ? ? ? ? ? ? 3.261 ? ? metalc20 metalc ? ? M BA . BA ? ? ? 1_555 FA HOH . O ? ? A BA 105 H HOH 202 2_545 ? ? ? ? ? ? ? 2.815 ? ? metalc21 metalc ? ? M BA . BA ? ? ? 1_555 FA HOH . O ? ? A BA 105 H HOH 218 1_554 ? ? ? ? ? ? ? 3.178 ? ? metalc22 metalc ? ? N BA . BA ? ? ? 1_555 Y HOH . O ? ? A BA 106 A HOH 216 1_555 ? ? ? ? ? ? ? 2.872 ? ? metalc23 metalc ? ? N BA . BA ? ? ? 1_555 Y HOH . O ? ? A BA 106 A HOH 220 1_555 ? ? ? ? ? ? ? 2.988 ? ? metalc24 metalc ? ? N BA . BA ? ? ? 1_555 EA HOH . O ? ? A BA 106 G HOH 213 1_554 ? ? ? ? ? ? ? 2.723 ? ? metalc25 metalc ? ? N BA . BA ? ? ? 2_555 H DC 5 OP1 A ? A BA 106 H DC 11 1_555 ? ? ? ? ? ? ? 3.186 ? ? metalc26 metalc ? ? N BA . BA ? ? ? 2_555 H G 6 O6 ? ? A BA 106 H G 12 1_555 ? ? ? ? ? ? ? 2.810 ? ? metalc27 metalc ? ? B DC 5 OP1 ? ? ? 1_555 O BA . BA ? ? B DC 11 B BA 101 1_555 ? ? ? ? ? ? ? 3.132 ? ? metalc28 metalc ? ? O BA . BA ? ? ? 1_555 Z HOH . O B ? B BA 101 B HOH 210 1_555 ? ? ? ? ? ? ? 2.628 ? ? metalc29 metalc ? ? O BA . BA ? ? ? 1_455 H DC 3 OP2 A ? B BA 101 H DC 9 1_555 ? ? ? ? ? ? ? 2.806 ? ? metalc30 metalc ? ? O BA . BA ? ? ? 1_555 FA HOH . O ? ? B BA 101 H HOH 204 1_655 ? ? ? ? ? ? ? 2.789 ? ? metalc31 metalc ? ? O BA . BA ? ? ? 1_555 FA HOH . O ? ? B BA 101 H HOH 205 1_655 ? ? ? ? ? ? ? 2.806 ? ? metalc32 metalc ? ? Z HOH . O ? ? ? 2_645 T BA . BA ? ? B HOH 215 F BA 101 1_555 ? ? ? ? ? ? ? 2.729 ? ? metalc33 metalc ? ? C DC 3 OP1 A ? ? 1_555 P BA . BA ? ? C DC 3 C BA 101 2_656 ? ? ? ? ? ? ? 2.956 ? ? metalc34 metalc ? ? C DC 3 OP2 B ? ? 1_555 W BA . BA ? ? C DC 3 G BA 101 2_656 ? ? ? ? ? ? ? 2.898 ? ? metalc35 metalc ? ? C G 4 O6 ? ? ? 1_555 P BA . BA ? ? C G 4 C BA 101 2_656 ? ? ? ? ? ? ? 2.677 ? ? metalc36 metalc ? ? C G 6 O6 ? ? ? 1_555 Q BA . BA ? ? C G 6 C BA 102 1_655 ? ? ? ? ? ? ? 2.668 ? ? metalc37 metalc ? ? P BA . BA ? ? ? 1_555 DA HOH . O ? ? C BA 101 F HOH 216 1_555 ? ? ? ? ? ? ? 3.494 ? ? metalc38 metalc ? ? P BA . BA ? ? ? 1_555 EA HOH . O ? ? C BA 101 G HOH 235 1_555 ? ? ? ? ? ? ? 2.507 ? ? metalc39 metalc ? ? AA HOH . O ? ? ? 2_646 W BA . BA ? ? C HOH 201 G BA 101 1_555 ? ? ? ? ? ? ? 2.852 ? ? metalc40 metalc ? ? AA HOH . O ? ? ? 1_455 X BA . BA ? ? C HOH 217 H BA 101 1_555 ? ? ? ? ? ? ? 2.737 ? ? metalc41 metalc ? ? D DC 3 OP1 ? ? ? 1_555 S BA . BA ? ? D DC 9 D BA 102 1_555 ? ? ? ? ? ? ? 2.664 ? ? metalc42 metalc ? ? D DC 5 OP1 ? ? ? 1_555 R BA . BA ? ? D DC 11 D BA 101 1_555 ? ? ? ? ? ? ? 3.094 ? ? metalc43 metalc ? ? R BA . BA ? ? ? 2_545 F DC 3 OP2 A ? D BA 101 F DC 9 1_555 ? ? ? ? ? ? ? 2.821 ? ? metalc44 metalc ? ? R BA . BA ? ? ? 1_555 DA HOH . O ? ? D BA 101 F HOH 204 2_555 ? ? ? ? ? ? ? 2.799 ? ? metalc45 metalc ? ? R BA . BA ? ? ? 1_555 DA HOH . O ? ? D BA 101 F HOH 205 2_555 ? ? ? ? ? ? ? 2.804 ? ? metalc46 metalc ? ? S BA . BA ? ? ? 1_555 BA HOH . O ? ? D BA 102 D HOH 211 1_555 ? ? ? ? ? ? ? 3.088 ? ? metalc47 metalc ? ? CA HOH . O ? ? ? 2_545 T BA . BA ? ? E HOH 209 F BA 101 1_555 ? ? ? ? ? ? ? 2.946 ? ? metalc48 metalc ? ? CA HOH . O ? ? ? 1_555 U BA . BA ? ? E HOH 215 F BA 102 1_555 ? ? ? ? ? ? ? 2.769 ? ? metalc49 metalc ? ? CA HOH . O ? ? ? 1_555 V BA . BA ? ? E HOH 215 F BA 103 1_555 ? ? ? ? ? ? ? 3.169 ? ? metalc50 metalc ? ? CA HOH . O ? ? ? 1_555 W BA . BA ? ? E HOH 234 G BA 101 1_555 ? ? ? ? ? ? ? 2.837 ? ? metalc51 metalc ? ? F DC 3 OP1 B ? ? 1_555 T BA . BA ? ? F DC 9 F BA 101 2_555 ? ? ? ? ? ? ? 3.026 ? ? metalc52 metalc ? ? F G 4 O6 ? ? ? 1_555 T BA . BA ? ? F G 10 F BA 101 2_555 ? ? ? ? ? ? ? 2.615 ? ? metalc53 metalc ? ? F DC 5 OP1 A ? ? 1_555 U BA . BA ? ? F DC 11 F BA 102 2_555 ? ? ? ? ? ? ? 3.168 ? ? metalc54 metalc ? ? F G 6 O6 ? ? ? 1_555 U BA . BA ? ? F G 12 F BA 102 2_555 ? ? ? ? ? ? ? 2.778 ? ? metalc55 metalc ? ? F G 6 O6 ? ? ? 1_555 V BA . BA ? ? F G 12 F BA 103 2_555 ? ? ? ? ? ? ? 3.432 ? ? metalc56 metalc ? ? U BA . BA ? ? ? 1_555 EA HOH . O ? ? F BA 102 G HOH 228 1_555 ? ? ? ? ? ? ? 2.676 ? ? metalc57 metalc ? ? U BA . BA ? ? ? 1_555 EA HOH . O ? ? F BA 102 G HOH 235 1_555 ? ? ? ? ? ? ? 2.785 ? ? metalc58 metalc ? ? V BA . BA ? ? ? 1_555 DA HOH . O ? ? F BA 103 F HOH 202 2_545 ? ? ? ? ? ? ? 2.959 ? ? metalc59 metalc ? ? V BA . BA ? ? ? 1_555 DA HOH . O ? ? F BA 103 F HOH 216 1_555 ? ? ? ? ? ? ? 3.030 ? ? metalc60 metalc ? ? V BA . BA ? ? ? 1_555 EA HOH . O ? ? F BA 103 G HOH 235 1_555 ? ? ? ? ? ? ? 2.848 ? ? metalc61 metalc ? ? G DC 5 OP1 ? ? ? 1_555 W BA . BA ? ? G DC 5 G BA 101 1_555 ? ? ? ? ? ? ? 2.807 ? ? metalc62 metalc ? ? W BA . BA ? ? ? 1_555 EA HOH . O ? ? G BA 101 G HOH 209 1_555 ? ? ? ? ? ? ? 2.888 ? ? metalc63 metalc ? ? W BA . BA ? ? ? 1_555 EA HOH . O ? ? G BA 101 G HOH 222 1_555 ? ? ? ? ? ? ? 2.775 ? ? metalc64 metalc ? ? EA HOH . O ? ? ? 1_555 X BA . BA ? ? G HOH 208 H BA 101 1_555 ? ? ? ? ? ? ? 2.985 ? ? metalc65 metalc ? ? H DC 3 OP1 B ? ? 1_555 X BA . BA ? ? H DC 9 H BA 101 1_555 ? ? ? ? ? ? ? 3.210 ? ? metalc66 metalc ? ? H G 4 O6 ? ? ? 1_555 X BA . BA ? ? H G 10 H BA 101 1_555 ? ? ? ? ? ? ? 2.631 ? ? hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 B G 6 N1 ? ? A DC 1 B G 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 B G 6 O6 ? ? A DC 1 B G 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 B G 6 N2 ? ? A DC 1 B G 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 2 N1 ? ? ? 1_555 B DC 5 N3 ? ? A G 2 B DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A G 2 N2 ? ? ? 1_555 B DC 5 O2 ? ? A G 2 B DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 2 O6 ? ? ? 1_555 B DC 5 N4 ? ? A G 2 B DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DC 3 N3 ? ? ? 1_555 B G 4 N1 ? ? A DC 3 B G 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 3 N4 ? ? ? 1_555 B G 4 O6 ? ? A DC 3 B G 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DC 3 O2 ? ? ? 1_555 B G 4 N2 ? ? A DC 3 B G 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A G 4 N1 ? ? ? 1_555 B DC 3 N3 ? ? A G 4 B DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A G 4 N2 ? ? ? 1_555 B DC 3 O2 ? ? A G 4 B DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A G 4 O6 ? ? ? 1_555 B DC 3 N4 ? ? A G 4 B DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 5 N3 ? ? ? 1_555 B G 2 N1 ? ? A DC 5 B G 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 5 N4 ? ? ? 1_555 B G 2 O6 ? ? A DC 5 B G 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 5 O2 ? ? ? 1_555 B G 2 N2 ? ? A DC 5 B G 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A G 6 N1 ? ? ? 1_555 B DC 1 N3 ? ? A G 6 B DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A G 6 N2 ? ? ? 1_555 B DC 1 O2 ? ? A G 6 B DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A G 6 O6 ? ? ? 1_555 B DC 1 N4 ? ? A G 6 B DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C DC 1 N3 ? ? ? 1_555 D G 6 N1 ? ? C DC 1 D G 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C DC 1 N4 ? ? ? 1_555 D G 6 O6 ? ? C DC 1 D G 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C DC 1 O2 ? ? ? 1_555 D G 6 N2 ? ? C DC 1 D G 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C G 2 N1 ? ? ? 1_555 D DC 5 N3 ? ? C G 2 D DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C G 2 N2 ? ? ? 1_555 D DC 5 O2 ? ? C G 2 D DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C G 2 O6 ? ? ? 1_555 D DC 5 N4 ? ? C G 2 D DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C DC 3 N3 ? ? ? 1_555 D G 4 N1 ? ? C DC 3 D G 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C DC 3 N4 ? ? ? 1_555 D G 4 O6 ? ? C DC 3 D G 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? C DC 3 O2 ? ? ? 1_555 D G 4 N2 ? ? C DC 3 D G 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? C G 4 N1 ? ? ? 1_555 D DC 3 N3 ? ? C G 4 D DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? C G 4 N2 ? ? ? 1_555 D DC 3 O2 ? ? C G 4 D DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? C G 4 O6 ? ? ? 1_555 D DC 3 N4 ? ? C G 4 D DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? C DC 5 N3 ? ? ? 1_555 D G 2 N1 ? ? C DC 5 D G 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C DC 5 N4 ? ? ? 1_555 D G 2 O6 ? ? C DC 5 D G 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? C DC 5 O2 ? ? ? 1_555 D G 2 N2 ? ? C DC 5 D G 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C G 6 N1 ? ? ? 1_555 D DC 1 N3 ? ? C G 6 D DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? C G 6 N2 ? ? ? 1_555 D DC 1 O2 ? ? C G 6 D DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? C G 6 O6 ? ? ? 1_555 D DC 1 N4 ? ? C G 6 D DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? E DC 1 N3 ? ? ? 1_555 F G 6 N1 ? ? E DC 1 F G 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? E DC 1 N4 ? ? ? 1_555 F G 6 O6 ? ? E DC 1 F G 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? E DC 1 O2 ? ? ? 1_555 F G 6 N2 ? ? E DC 1 F G 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? E G 2 N1 ? ? ? 1_555 F DC 5 N3 ? ? E G 2 F DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? E G 2 N2 ? ? ? 1_555 F DC 5 O2 ? ? E G 2 F DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? E G 2 O6 ? ? ? 1_555 F DC 5 N4 ? ? E G 2 F DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? E DC 3 N3 ? ? ? 1_555 F G 4 N1 ? ? E DC 3 F G 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? E DC 3 N4 ? ? ? 1_555 F G 4 O6 ? ? E DC 3 F G 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? E DC 3 O2 ? ? ? 1_555 F G 4 N2 ? ? E DC 3 F G 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? E G 4 N1 ? ? ? 1_555 F DC 3 N3 ? ? E G 4 F DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? E G 4 N2 ? ? ? 1_555 F DC 3 O2 ? ? E G 4 F DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? E G 4 O6 ? ? ? 1_555 F DC 3 N4 ? ? E G 4 F DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? E DC 5 N3 ? ? ? 1_555 F G 2 N1 ? ? E DC 5 F G 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? E DC 5 N4 ? ? ? 1_555 F G 2 O6 ? ? E DC 5 F G 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? E DC 5 O2 ? ? ? 1_555 F G 2 N2 ? ? E DC 5 F G 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? E G 6 N1 ? ? ? 1_555 F DC 1 N3 ? ? E G 6 F DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? E G 6 N2 ? ? ? 1_555 F DC 1 O2 ? ? E G 6 F DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? E G 6 O6 ? ? ? 1_555 F DC 1 N4 ? ? E G 6 F DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? G DC 1 N3 ? ? ? 1_555 H G 6 N1 ? ? G DC 1 H G 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? G DC 1 N4 ? ? ? 1_555 H G 6 O6 ? ? G DC 1 H G 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? G DC 1 O2 ? ? ? 1_555 H G 6 N2 ? ? G DC 1 H G 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? G G 2 N1 ? ? ? 1_555 H DC 5 N3 ? ? G G 2 H DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? G G 2 N2 ? ? ? 1_555 H DC 5 O2 ? ? G G 2 H DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? G G 2 O6 ? ? ? 1_555 H DC 5 N4 ? ? G G 2 H DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? G DC 3 N3 ? ? ? 1_555 H G 4 N1 ? ? G DC 3 H G 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? G DC 3 N4 ? ? ? 1_555 H G 4 O6 ? ? G DC 3 H G 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? G DC 3 O2 ? ? ? 1_555 H G 4 N2 ? ? G DC 3 H G 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? G G 4 N1 ? ? ? 1_555 H DC 3 N3 ? ? G G 4 H DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? G G 4 N2 ? ? ? 1_555 H DC 3 O2 ? ? G G 4 H DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? G G 4 O6 ? ? ? 1_555 H DC 3 N4 ? ? G G 4 H DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? G DC 5 N3 ? ? ? 1_555 H G 2 N1 ? ? G DC 5 H G 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? G DC 5 N4 ? ? ? 1_555 H G 2 O6 ? ? G DC 5 H G 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? G DC 5 O2 ? ? ? 1_555 H G 2 N2 ? ? G DC 5 H G 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? G G 6 N1 ? ? ? 1_555 H DC 1 N3 ? ? G G 6 H DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? G G 6 N2 ? ? ? 1_555 H DC 1 O2 ? ? G G 6 H DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? G G 6 O6 ? ? ? 1_555 H DC 1 N4 ? ? G G 6 H DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OP2 A A DC 3 ? A DC 3 ? 1_555 BA ? J BA . ? A BA 102 ? 1_555 O ? Y HOH . ? A HOH 202 ? 1_555 72.1 ? 2 OP2 A A DC 3 ? A DC 3 ? 1_555 BA ? J BA . ? A BA 102 ? 1_555 O ? Y HOH . ? A HOH 203 ? 1_555 78.1 ? 3 O ? Y HOH . ? A HOH 202 ? 1_555 BA ? J BA . ? A BA 102 ? 1_555 O ? Y HOH . ? A HOH 203 ? 1_555 67.7 ? 4 OP2 A A DC 3 ? A DC 3 ? 1_555 BA ? J BA . ? A BA 102 ? 1_555 O ? Y HOH . ? A HOH 209 ? 1_555 83.4 ? 5 O ? Y HOH . ? A HOH 202 ? 1_555 BA ? J BA . ? A BA 102 ? 1_555 O ? Y HOH . ? A HOH 209 ? 1_555 143.7 ? 6 O ? Y HOH . ? A HOH 203 ? 1_555 BA ? J BA . ? A BA 102 ? 1_555 O ? Y HOH . ? A HOH 209 ? 1_555 133.2 ? 7 OP2 A A DC 3 ? A DC 3 ? 1_555 BA ? J BA . ? A BA 102 ? 1_555 OP1 ? E DC 5 ? E DC 5 ? 1_555 143.4 ? 8 O ? Y HOH . ? A HOH 202 ? 1_555 BA ? J BA . ? A BA 102 ? 1_555 OP1 ? E DC 5 ? E DC 5 ? 1_555 76.2 ? 9 O ? Y HOH . ? A HOH 203 ? 1_555 BA ? J BA . ? A BA 102 ? 1_555 OP1 ? E DC 5 ? E DC 5 ? 1_555 73.3 ? 10 O ? Y HOH . ? A HOH 209 ? 1_555 BA ? J BA . ? A BA 102 ? 1_555 OP1 ? E DC 5 ? E DC 5 ? 1_555 133.1 ? 11 OP2 A A DC 3 ? A DC 3 ? 1_555 BA ? J BA . ? A BA 102 ? 1_555 O ? CA HOH . ? E HOH 208 ? 1_555 136.5 ? 12 O ? Y HOH . ? A HOH 202 ? 1_555 BA ? J BA . ? A BA 102 ? 1_555 O ? CA HOH . ? E HOH 208 ? 1_555 110.2 ? 13 O ? Y HOH . ? A HOH 203 ? 1_555 BA ? J BA . ? A BA 102 ? 1_555 O ? CA HOH . ? E HOH 208 ? 1_555 144.6 ? 14 O ? Y HOH . ? A HOH 209 ? 1_555 BA ? J BA . ? A BA 102 ? 1_555 O ? CA HOH . ? E HOH 208 ? 1_555 70.5 ? 15 OP1 ? E DC 5 ? E DC 5 ? 1_555 BA ? J BA . ? A BA 102 ? 1_555 O ? CA HOH . ? E HOH 208 ? 1_555 72.0 ? 16 OP1 B A DC 3 ? A DC 3 ? 1_555 BA ? L BA . ? A BA 104 ? 1_555 O6 ? A G 4 ? A G 4 ? 1_555 87.6 ? 17 OP1 B A DC 3 ? A DC 3 ? 1_555 BA ? L BA . ? A BA 104 ? 1_555 O ? Y HOH . ? A HOH 220 ? 1_555 148.1 ? 18 O6 ? A G 4 ? A G 4 ? 1_555 BA ? L BA . ? A BA 104 ? 1_555 O ? Y HOH . ? A HOH 220 ? 1_555 71.6 ? 19 OP1 B A DC 3 ? A DC 3 ? 1_555 BA ? L BA . ? A BA 104 ? 1_555 O ? FA HOH . ? H HOH 218 ? 1_554 45.9 ? 20 O6 ? A G 4 ? A G 4 ? 1_555 BA ? L BA . ? A BA 104 ? 1_555 O ? FA HOH . ? H HOH 218 ? 1_554 133.1 ? 21 O ? Y HOH . ? A HOH 220 ? 1_555 BA ? L BA . ? A BA 104 ? 1_555 O ? FA HOH . ? H HOH 218 ? 1_554 144.0 ? 22 O ? Y HOH . ? A HOH 223 ? 1_555 BA ? I BA . ? A BA 101 ? 1_555 O ? Y HOH . ? A HOH 228 ? 1_555 71.0 ? 23 O ? Y HOH . ? A HOH 223 ? 1_555 BA ? I BA . ? A BA 101 ? 1_555 O ? Z HOH . ? B HOH 202 ? 2_655 135.9 ? 24 O ? Y HOH . ? A HOH 228 ? 1_555 BA ? I BA . ? A BA 101 ? 1_555 O ? Z HOH . ? B HOH 202 ? 2_655 87.9 ? 25 O ? Y HOH . ? A HOH 223 ? 1_555 BA ? I BA . ? A BA 101 ? 1_555 O ? Z HOH . ? B HOH 217 ? 2_655 70.0 ? 26 O ? Y HOH . ? A HOH 228 ? 1_555 BA ? I BA . ? A BA 101 ? 1_555 O ? Z HOH . ? B HOH 217 ? 2_655 75.9 ? 27 O ? Z HOH . ? B HOH 202 ? 2_655 BA ? I BA . ? A BA 101 ? 1_555 O ? Z HOH . ? B HOH 217 ? 2_655 67.4 ? 28 O ? Y HOH . ? A HOH 223 ? 1_555 BA ? I BA . ? A BA 101 ? 1_555 O ? EA HOH . ? G HOH 211 ? 1_554 65.1 ? 29 O ? Y HOH . ? A HOH 228 ? 1_555 BA ? I BA . ? A BA 101 ? 1_555 O ? EA HOH . ? G HOH 211 ? 1_554 127.1 ? 30 O ? Z HOH . ? B HOH 202 ? 2_655 BA ? I BA . ? A BA 101 ? 1_555 O ? EA HOH . ? G HOH 211 ? 1_554 103.5 ? 31 O ? Z HOH . ? B HOH 217 ? 2_655 BA ? I BA . ? A BA 101 ? 1_555 O ? EA HOH . ? G HOH 211 ? 1_554 62.6 ? 32 O ? Y HOH . ? A HOH 220 ? 1_555 BA ? M BA . ? A BA 105 ? 1_555 O ? EA HOH . ? G HOH 213 ? 1_554 116.0 ? 33 O ? Y HOH . ? A HOH 220 ? 1_555 BA ? M BA . ? A BA 105 ? 1_555 O6 ? H G 6 ? H G 12 ? 1_555 114.4 ? 34 O ? EA HOH . ? G HOH 213 ? 1_554 BA ? M BA . ? A BA 105 ? 1_555 O6 ? H G 6 ? H G 12 ? 1_555 123.3 ? 35 O ? Y HOH . ? A HOH 220 ? 1_555 BA ? M BA . ? A BA 105 ? 1_555 O ? FA HOH . ? H HOH 202 ? 2_545 72.2 ? 36 O ? EA HOH . ? G HOH 213 ? 1_554 BA ? M BA . ? A BA 105 ? 1_555 O ? FA HOH . ? H HOH 202 ? 2_545 84.4 ? 37 O6 ? H G 6 ? H G 12 ? 1_555 BA ? M BA . ? A BA 105 ? 1_555 O ? FA HOH . ? H HOH 202 ? 2_545 135.3 ? 38 O ? Y HOH . ? A HOH 220 ? 1_555 BA ? M BA . ? A BA 105 ? 1_555 O ? FA HOH . ? H HOH 218 ? 1_554 138.9 ? 39 O ? EA HOH . ? G HOH 213 ? 1_554 BA ? M BA . ? A BA 105 ? 1_555 O ? FA HOH . ? H HOH 218 ? 1_554 87.1 ? 40 O6 ? H G 6 ? H G 12 ? 1_555 BA ? M BA . ? A BA 105 ? 1_555 O ? FA HOH . ? H HOH 218 ? 1_554 36.7 ? 41 O ? FA HOH . ? H HOH 202 ? 2_545 BA ? M BA . ? A BA 105 ? 1_555 O ? FA HOH . ? H HOH 218 ? 1_554 147.3 ? 42 O ? Y HOH . ? A HOH 216 ? 1_555 BA ? N BA . ? A BA 106 ? 1_555 O ? Y HOH . ? A HOH 220 ? 1_555 75.9 ? 43 O ? Y HOH . ? A HOH 216 ? 1_555 BA ? N BA . ? A BA 106 ? 1_555 O ? EA HOH . ? G HOH 213 ? 1_554 120.9 ? 44 O ? Y HOH . ? A HOH 220 ? 1_555 BA ? N BA . ? A BA 106 ? 1_555 O ? EA HOH . ? G HOH 213 ? 1_554 130.8 ? 45 O ? Y HOH . ? A HOH 216 ? 1_555 BA ? N BA . ? A BA 106 ? 1_555 OP1 A H DC 5 ? H DC 11 ? 1_555 20.9 ? 46 O ? Y HOH . ? A HOH 220 ? 1_555 BA ? N BA . ? A BA 106 ? 1_555 OP1 A H DC 5 ? H DC 11 ? 1_555 96.1 ? 47 O ? EA HOH . ? G HOH 213 ? 1_554 BA ? N BA . ? A BA 106 ? 1_555 OP1 A H DC 5 ? H DC 11 ? 1_555 110.8 ? 48 O ? Y HOH . ? A HOH 216 ? 1_555 BA ? N BA . ? A BA 106 ? 1_555 O6 ? H G 6 ? H G 12 ? 1_555 19.9 ? 49 O ? Y HOH . ? A HOH 220 ? 1_555 BA ? N BA . ? A BA 106 ? 1_555 O6 ? H G 6 ? H G 12 ? 1_555 95.7 ? 50 O ? EA HOH . ? G HOH 213 ? 1_554 BA ? N BA . ? A BA 106 ? 1_555 O6 ? H G 6 ? H G 12 ? 1_555 108.1 ? 51 OP1 A H DC 5 ? H DC 11 ? 1_555 BA ? N BA . ? A BA 106 ? 1_555 O6 ? H G 6 ? H G 12 ? 1_555 4.4 ? 52 OP1 ? B DC 5 ? B DC 11 ? 1_555 BA ? O BA . ? B BA 101 ? 1_555 O B Z HOH . ? B HOH 210 ? 1_555 62.6 ? 53 OP1 ? B DC 5 ? B DC 11 ? 1_555 BA ? O BA . ? B BA 101 ? 1_555 OP2 A H DC 3 ? H DC 9 ? 1_555 125.8 ? 54 O B Z HOH . ? B HOH 210 ? 1_555 BA ? O BA . ? B BA 101 ? 1_555 OP2 A H DC 3 ? H DC 9 ? 1_555 106.6 ? 55 OP1 ? B DC 5 ? B DC 11 ? 1_555 BA ? O BA . ? B BA 101 ? 1_555 O ? FA HOH . ? H HOH 204 ? 1_655 119.1 ? 56 O B Z HOH . ? B HOH 210 ? 1_555 BA ? O BA . ? B BA 101 ? 1_555 O ? FA HOH . ? H HOH 204 ? 1_655 126.0 ? 57 OP2 A H DC 3 ? H DC 9 ? 1_555 BA ? O BA . ? B BA 101 ? 1_555 O ? FA HOH . ? H HOH 204 ? 1_655 23.4 ? 58 OP1 ? B DC 5 ? B DC 11 ? 1_555 BA ? O BA . ? B BA 101 ? 1_555 O ? FA HOH . ? H HOH 205 ? 1_655 74.9 ? 59 O B Z HOH . ? B HOH 210 ? 1_555 BA ? O BA . ? B BA 101 ? 1_555 O ? FA HOH . ? H HOH 205 ? 1_655 137.4 ? 60 OP2 A H DC 3 ? H DC 9 ? 1_555 BA ? O BA . ? B BA 101 ? 1_555 O ? FA HOH . ? H HOH 205 ? 1_655 95.9 ? 61 O ? FA HOH . ? H HOH 204 ? 1_655 BA ? O BA . ? B BA 101 ? 1_555 O ? FA HOH . ? H HOH 205 ? 1_655 72.6 ? 62 O ? Z HOH . ? B HOH 215 ? 2_645 BA ? T BA . ? F BA 101 ? 1_555 O ? CA HOH . ? E HOH 209 ? 2_545 107.7 ? 63 O ? Z HOH . ? B HOH 215 ? 2_645 BA ? T BA . ? F BA 101 ? 1_555 OP1 B F DC 3 ? F DC 9 ? 1_555 155.8 ? 64 O ? CA HOH . ? E HOH 209 ? 2_545 BA ? T BA . ? F BA 101 ? 1_555 OP1 B F DC 3 ? F DC 9 ? 1_555 51.9 ? 65 O ? Z HOH . ? B HOH 215 ? 2_645 BA ? T BA . ? F BA 101 ? 1_555 O6 ? F G 4 ? F G 10 ? 1_555 151.0 ? 66 O ? CA HOH . ? E HOH 209 ? 2_545 BA ? T BA . ? F BA 101 ? 1_555 O6 ? F G 4 ? F G 10 ? 1_555 53.4 ? 67 OP1 B F DC 3 ? F DC 9 ? 1_555 BA ? T BA . ? F BA 101 ? 1_555 O6 ? F G 4 ? F G 10 ? 1_555 8.2 ? 68 OP1 A C DC 3 ? C DC 3 ? 1_555 BA ? P BA . ? C BA 101 ? 2_656 O6 ? C G 4 ? C G 4 ? 1_555 91.1 ? 69 OP1 A C DC 3 ? C DC 3 ? 1_555 BA ? P BA . ? C BA 101 ? 2_656 O ? DA HOH . ? F HOH 216 ? 1_555 124.5 ? 70 O6 ? C G 4 ? C G 4 ? 1_555 BA ? P BA . ? C BA 101 ? 2_656 O ? DA HOH . ? F HOH 216 ? 1_555 34.9 ? 71 OP1 A C DC 3 ? C DC 3 ? 1_555 BA ? P BA . ? C BA 101 ? 2_656 O ? EA HOH . ? G HOH 235 ? 1_555 132.2 ? 72 O6 ? C G 4 ? C G 4 ? 1_555 BA ? P BA . ? C BA 101 ? 2_656 O ? EA HOH . ? G HOH 235 ? 1_555 44.5 ? 73 O ? DA HOH . ? F HOH 216 ? 1_555 BA ? P BA . ? C BA 101 ? 2_656 O ? EA HOH . ? G HOH 235 ? 1_555 9.9 ? 74 OP2 B C DC 3 ? C DC 3 ? 1_555 BA ? W BA . ? G BA 101 ? 2_656 O ? AA HOH . ? C HOH 201 ? 2_646 38.3 ? 75 OP2 B C DC 3 ? C DC 3 ? 1_555 BA ? W BA . ? G BA 101 ? 2_656 O ? CA HOH . ? E HOH 234 ? 1_555 43.7 ? 76 O ? AA HOH . ? C HOH 201 ? 2_646 BA ? W BA . ? G BA 101 ? 2_656 O ? CA HOH . ? E HOH 234 ? 1_555 8.4 ? 77 OP2 B C DC 3 ? C DC 3 ? 1_555 BA ? W BA . ? G BA 101 ? 2_656 OP1 ? G DC 5 ? G DC 5 ? 1_555 33.5 ? 78 O ? AA HOH . ? C HOH 201 ? 2_646 BA ? W BA . ? G BA 101 ? 2_656 OP1 ? G DC 5 ? G DC 5 ? 1_555 5.9 ? 79 O ? CA HOH . ? E HOH 234 ? 1_555 BA ? W BA . ? G BA 101 ? 2_656 OP1 ? G DC 5 ? G DC 5 ? 1_555 10.5 ? 80 OP2 B C DC 3 ? C DC 3 ? 1_555 BA ? W BA . ? G BA 101 ? 2_656 O ? EA HOH . ? G HOH 209 ? 1_555 38.6 ? 81 O ? AA HOH . ? C HOH 201 ? 2_646 BA ? W BA . ? G BA 101 ? 2_656 O ? EA HOH . ? G HOH 209 ? 1_555 8.7 ? 82 O ? CA HOH . ? E HOH 234 ? 1_555 BA ? W BA . ? G BA 101 ? 2_656 O ? EA HOH . ? G HOH 209 ? 1_555 5.9 ? 83 OP1 ? G DC 5 ? G DC 5 ? 1_555 BA ? W BA . ? G BA 101 ? 2_656 O ? EA HOH . ? G HOH 209 ? 1_555 6.9 ? 84 OP2 B C DC 3 ? C DC 3 ? 1_555 BA ? W BA . ? G BA 101 ? 2_656 O ? EA HOH . ? G HOH 222 ? 1_555 37.1 ? 85 O ? AA HOH . ? C HOH 201 ? 2_646 BA ? W BA . ? G BA 101 ? 2_656 O ? EA HOH . ? G HOH 222 ? 1_555 2.8 ? 86 O ? CA HOH . ? E HOH 234 ? 1_555 BA ? W BA . ? G BA 101 ? 2_656 O ? EA HOH . ? G HOH 222 ? 1_555 11.1 ? 87 OP1 ? G DC 5 ? G DC 5 ? 1_555 BA ? W BA . ? G BA 101 ? 2_656 O ? EA HOH . ? G HOH 222 ? 1_555 6.8 ? 88 O ? EA HOH . ? G HOH 209 ? 1_555 BA ? W BA . ? G BA 101 ? 2_656 O ? EA HOH . ? G HOH 222 ? 1_555 11.2 ? 89 O ? AA HOH . ? C HOH 217 ? 1_455 BA ? X BA . ? H BA 101 ? 1_555 O ? EA HOH . ? G HOH 208 ? 1_555 107.6 ? 90 O ? AA HOH . ? C HOH 217 ? 1_455 BA ? X BA . ? H BA 101 ? 1_555 OP1 B H DC 3 ? H DC 9 ? 1_555 77.3 ? 91 O ? EA HOH . ? G HOH 208 ? 1_555 BA ? X BA . ? H BA 101 ? 1_555 OP1 B H DC 3 ? H DC 9 ? 1_555 140.2 ? 92 O ? AA HOH . ? C HOH 217 ? 1_455 BA ? X BA . ? H BA 101 ? 1_555 O6 ? H G 4 ? H G 10 ? 1_555 153.4 ? 93 O ? EA HOH . ? G HOH 208 ? 1_555 BA ? X BA . ? H BA 101 ? 1_555 O6 ? H G 4 ? H G 10 ? 1_555 67.1 ? 94 OP1 B H DC 3 ? H DC 9 ? 1_555 BA ? X BA . ? H BA 101 ? 1_555 O6 ? H G 4 ? H G 10 ? 1_555 90.7 ? 95 OP1 ? D DC 3 ? D DC 9 ? 1_555 BA ? S BA . ? D BA 102 ? 1_555 O ? BA HOH . ? D HOH 211 ? 1_555 57.9 ? 96 OP1 ? D DC 5 ? D DC 11 ? 1_555 BA ? R BA . ? D BA 101 ? 1_555 OP2 A F DC 3 ? F DC 9 ? 1_555 93.0 ? 97 OP1 ? D DC 5 ? D DC 11 ? 1_555 BA ? R BA . ? D BA 101 ? 1_555 O ? DA HOH . ? F HOH 204 ? 2_555 119.4 ? 98 OP2 A F DC 3 ? F DC 9 ? 1_555 BA ? R BA . ? D BA 101 ? 1_555 O ? DA HOH . ? F HOH 204 ? 2_555 137.7 ? 99 OP1 ? D DC 5 ? D DC 11 ? 1_555 BA ? R BA . ? D BA 101 ? 1_555 O ? DA HOH . ? F HOH 205 ? 2_555 74.6 ? 100 OP2 A F DC 3 ? F DC 9 ? 1_555 BA ? R BA . ? D BA 101 ? 1_555 O ? DA HOH . ? F HOH 205 ? 2_555 146.8 ? 101 O ? DA HOH . ? F HOH 204 ? 2_555 BA ? R BA . ? D BA 101 ? 1_555 O ? DA HOH . ? F HOH 205 ? 2_555 72.8 ? 102 O ? CA HOH . ? E HOH 215 ? 1_555 BA ? U BA . ? F BA 102 ? 1_555 OP1 A F DC 5 ? F DC 11 ? 1_555 52.5 ? 103 O ? CA HOH . ? E HOH 215 ? 1_555 BA ? U BA . ? F BA 102 ? 1_555 O6 ? F G 6 ? F G 12 ? 1_555 53.8 ? 104 OP1 A F DC 5 ? F DC 11 ? 1_555 BA ? U BA . ? F BA 102 ? 1_555 O6 ? F G 6 ? F G 12 ? 1_555 8.9 ? 105 O ? CA HOH . ? E HOH 215 ? 1_555 BA ? U BA . ? F BA 102 ? 1_555 O ? EA HOH . ? G HOH 228 ? 1_555 120.4 ? 106 OP1 A F DC 5 ? F DC 11 ? 1_555 BA ? U BA . ? F BA 102 ? 1_555 O ? EA HOH . ? G HOH 228 ? 1_555 88.7 ? 107 O6 ? F G 6 ? F G 12 ? 1_555 BA ? U BA . ? F BA 102 ? 1_555 O ? EA HOH . ? G HOH 228 ? 1_555 81.6 ? 108 O ? CA HOH . ? E HOH 215 ? 1_555 BA ? U BA . ? F BA 102 ? 1_555 O ? EA HOH . ? G HOH 235 ? 1_555 123.1 ? 109 OP1 A F DC 5 ? F DC 11 ? 1_555 BA ? U BA . ? F BA 102 ? 1_555 O ? EA HOH . ? G HOH 235 ? 1_555 167.4 ? 110 O6 ? F G 6 ? F G 12 ? 1_555 BA ? U BA . ? F BA 102 ? 1_555 O ? EA HOH . ? G HOH 235 ? 1_555 158.8 ? 111 O ? EA HOH . ? G HOH 228 ? 1_555 BA ? U BA . ? F BA 102 ? 1_555 O ? EA HOH . ? G HOH 235 ? 1_555 84.3 ? 112 O ? CA HOH . ? E HOH 215 ? 1_555 BA ? V BA . ? F BA 103 ? 1_555 O6 ? F G 6 ? F G 12 ? 1_555 61.8 ? 113 O ? CA HOH . ? E HOH 215 ? 1_555 BA ? V BA . ? F BA 103 ? 1_555 O ? DA HOH . ? F HOH 202 ? 2_545 82.5 ? 114 O6 ? F G 6 ? F G 12 ? 1_555 BA ? V BA . ? F BA 103 ? 1_555 O ? DA HOH . ? F HOH 202 ? 2_545 114.4 ? 115 O ? CA HOH . ? E HOH 215 ? 1_555 BA ? V BA . ? F BA 103 ? 1_555 O ? DA HOH . ? F HOH 216 ? 1_555 88.4 ? 116 O6 ? F G 6 ? F G 12 ? 1_555 BA ? V BA . ? F BA 103 ? 1_555 O ? DA HOH . ? F HOH 216 ? 1_555 34.1 ? 117 O ? DA HOH . ? F HOH 202 ? 2_545 BA ? V BA . ? F BA 103 ? 1_555 O ? DA HOH . ? F HOH 216 ? 1_555 144.2 ? 118 O ? CA HOH . ? E HOH 215 ? 1_555 BA ? V BA . ? F BA 103 ? 1_555 O ? EA HOH . ? G HOH 235 ? 1_555 108.4 ? 119 O6 ? F G 6 ? F G 12 ? 1_555 BA ? V BA . ? F BA 103 ? 1_555 O ? EA HOH . ? G HOH 235 ? 1_555 170.1 ? 120 O ? DA HOH . ? F HOH 202 ? 2_545 BA ? V BA . ? F BA 103 ? 1_555 O ? EA HOH . ? G HOH 235 ? 1_555 63.3 ? 121 O ? DA HOH . ? F HOH 216 ? 1_555 BA ? V BA . ? F BA 103 ? 1_555 O ? EA HOH . ? G HOH 235 ? 1_555 151.2 ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A BA 101 ? 3 'binding site for residue BA A 101' AC2 Software A BA 102 ? 6 'binding site for residue BA A 102' AC3 Software A BA 103 ? 2 'binding site for residue BA A 103' AC4 Software A BA 104 ? 6 'binding site for residue BA A 104' AC5 Software A BA 105 ? 4 'binding site for residue BA A 105' AC6 Software A BA 106 ? 5 'binding site for residue BA A 106' AC7 Software B BA 101 ? 5 'binding site for residue BA B 101' AC8 Software C BA 101 ? 4 'binding site for residue BA C 101' AC9 Software C BA 102 ? 3 'binding site for residue BA C 102' AD1 Software D BA 101 ? 2 'binding site for residue BA D 101' AD2 Software D BA 102 ? 4 'binding site for residue BA D 102' AD3 Software F BA 101 ? 1 'binding site for residue BA F 101' AD4 Software F BA 102 ? 5 'binding site for residue BA F 102' AD5 Software F BA 103 ? 5 'binding site for residue BA F 103' AD6 Software G BA 101 ? 4 'binding site for residue BA G 101' AD7 Software H BA 101 ? 5 'binding site for residue BA H 101' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 HOH Y . ? HOH A 223 . ? 1_555 ? 2 AC1 3 HOH Y . ? HOH A 228 . ? 1_555 ? 3 AC1 3 HOH EA . ? HOH G 211 . ? 1_554 ? 4 AC2 6 DC A 3 ? DC A 3 . ? 1_555 ? 5 AC2 6 HOH Y . ? HOH A 202 . ? 1_555 ? 6 AC2 6 HOH Y . ? HOH A 203 . ? 1_555 ? 7 AC2 6 HOH Y . ? HOH A 209 . ? 1_555 ? 8 AC2 6 DC E 5 ? DC E 5 . ? 1_555 ? 9 AC2 6 HOH CA . ? HOH E 208 . ? 1_555 ? 10 AC3 2 G A 6 ? G A 6 . ? 1_555 ? 11 AC3 2 BA T . ? BA F 101 . ? 1_555 ? 12 AC4 6 DC A 3 ? DC A 3 . ? 1_555 ? 13 AC4 6 G A 4 ? G A 4 . ? 1_555 ? 14 AC4 6 BA M . ? BA A 105 . ? 1_555 ? 15 AC4 6 BA N . ? BA A 106 . ? 1_555 ? 16 AC4 6 HOH Y . ? HOH A 216 . ? 1_555 ? 17 AC4 6 HOH Y . ? HOH A 220 . ? 1_555 ? 18 AC5 4 BA L . ? BA A 104 . ? 1_555 ? 19 AC5 4 BA N . ? BA A 106 . ? 1_555 ? 20 AC5 4 HOH Y . ? HOH A 216 . ? 1_555 ? 21 AC5 4 HOH Y . ? HOH A 220 . ? 1_555 ? 22 AC6 5 BA L . ? BA A 104 . ? 1_555 ? 23 AC6 5 BA M . ? BA A 105 . ? 1_555 ? 24 AC6 5 HOH Y . ? HOH A 216 . ? 1_555 ? 25 AC6 5 HOH Y . ? HOH A 220 . ? 1_555 ? 26 AC6 5 HOH EA . ? HOH G 213 . ? 1_554 ? 27 AC7 5 DC B 5 ? DC B 11 . ? 1_555 ? 28 AC7 5 HOH Z . ? HOH B 210 . ? 1_555 ? 29 AC7 5 DC H 3 ? DC H 9 . ? 1_655 ? 30 AC7 5 HOH FA . ? HOH H 204 . ? 1_655 ? 31 AC7 5 HOH FA . ? HOH H 205 . ? 1_655 ? 32 AC8 4 BA U . ? BA F 102 . ? 1_555 ? 33 AC8 4 BA V . ? BA F 103 . ? 1_555 ? 34 AC8 4 HOH EA . ? HOH G 228 . ? 1_555 ? 35 AC8 4 HOH EA . ? HOH G 235 . ? 1_555 ? 36 AC9 3 G C 6 ? G C 6 . ? 1_455 ? 37 AC9 3 HOH AA . ? HOH C 217 . ? 1_455 ? 38 AC9 3 BA X . ? BA H 101 . ? 1_555 ? 39 AD1 2 DC D 5 ? DC D 11 . ? 1_555 ? 40 AD1 2 HOH BA . ? HOH D 215 . ? 1_555 ? 41 AD2 4 DC D 3 ? DC D 9 . ? 1_555 ? 42 AD2 4 HOH BA . ? HOH D 205 . ? 1_555 ? 43 AD2 4 HOH BA . ? HOH D 211 . ? 1_555 ? 44 AD2 4 HOH FA . ? HOH H 210 . ? 1_555 ? 45 AD3 1 BA K . ? BA A 103 . ? 1_555 ? 46 AD4 5 BA P . ? BA C 101 . ? 1_555 ? 47 AD4 5 HOH CA . ? HOH E 215 . ? 1_555 ? 48 AD4 5 BA V . ? BA F 103 . ? 1_555 ? 49 AD4 5 HOH EA . ? HOH G 228 . ? 1_555 ? 50 AD4 5 HOH EA . ? HOH G 235 . ? 1_555 ? 51 AD5 5 BA P . ? BA C 101 . ? 1_555 ? 52 AD5 5 BA U . ? BA F 102 . ? 1_555 ? 53 AD5 5 HOH DA . ? HOH F 216 . ? 1_555 ? 54 AD5 5 HOH EA . ? HOH G 228 . ? 1_555 ? 55 AD5 5 HOH EA . ? HOH G 235 . ? 1_555 ? 56 AD6 4 HOH CA . ? HOH E 234 . ? 1_555 ? 57 AD6 4 DC G 5 ? DC G 5 . ? 1_555 ? 58 AD6 4 HOH EA . ? HOH G 209 . ? 1_555 ? 59 AD6 4 HOH EA . ? HOH G 222 . ? 1_555 ? 60 AD7 5 BA Q . ? BA C 102 . ? 1_555 ? 61 AD7 5 HOH AA . ? HOH C 217 . ? 1_455 ? 62 AD7 5 HOH EA . ? HOH G 208 . ? 1_555 ? 63 AD7 5 DC H 3 ? DC H 9 . ? 1_555 ? 64 AD7 5 G H 4 ? G H 10 . ? 1_555 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O C HOH 204 ? ? O C HOH 218 ? ? 2.10 2 1 O A HOH 214 ? ? O A HOH 221 ? ? 2.18 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "C5'" F G 8 ? B "C4'" F G 8 ? ? 1.438 1.508 -0.070 0.007 N 2 1 "C4'" F G 8 ? ? "C3'" F G 8 ? B 1.596 1.527 0.069 0.011 N 3 1 "C3'" F G 10 ? B "C2'" F G 10 ? ? 1.609 1.525 0.084 0.011 N 4 1 "O3'" H G 10 ? B "C3'" H G 10 ? B 1.503 1.427 0.076 0.012 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C3'" C G 2 ? A "O3'" C G 2 ? A P C DC 3 ? A 128.73 119.70 9.03 1.20 Y 2 1 "C3'" F G 8 ? B "C2'" F G 8 ? ? "C1'" F G 8 ? ? 106.33 101.50 4.83 0.80 N 3 1 "C3'" F G 8 ? B "O3'" F G 8 ? B P F DC 9 ? B 127.52 119.70 7.82 1.20 Y # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? A HOH 231 ? 5.93 . 2 1 O ? B HOH 220 ? 6.65 . 3 1 O ? D HOH 227 ? 7.53 . 4 1 O ? D HOH 228 ? 7.75 . 5 1 O ? E HOH 236 ? 6.84 . 6 1 O ? G HOH 235 ? 7.00 . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal BA BA BA N N 1 DC OP3 O N N 2 DC P P N N 3 DC OP1 O N N 4 DC OP2 O N N 5 DC "O5'" O N N 6 DC "C5'" C N N 7 DC "C4'" C N R 8 DC "O4'" O N N 9 DC "C3'" C N S 10 DC "O3'" O N N 11 DC "C2'" C N N 12 DC "C1'" C N R 13 DC N1 N N N 14 DC C2 C N N 15 DC O2 O N N 16 DC N3 N N N 17 DC C4 C N N 18 DC N4 N N N 19 DC C5 C N N 20 DC C6 C N N 21 DC HOP3 H N N 22 DC HOP2 H N N 23 DC "H5'" H N N 24 DC "H5''" H N N 25 DC "H4'" H N N 26 DC "H3'" H N N 27 DC "HO3'" H N N 28 DC "H2'" H N N 29 DC "H2''" H N N 30 DC "H1'" H N N 31 DC H41 H N N 32 DC H42 H N N 33 DC H5 H N N 34 DC H6 H N N 35 G OP3 O N N 36 G P P N N 37 G OP1 O N N 38 G OP2 O N N 39 G "O5'" O N N 40 G "C5'" C N N 41 G "C4'" C N R 42 G "O4'" O N N 43 G "C3'" C N S 44 G "O3'" O N N 45 G "C2'" C N R 46 G "O2'" O N N 47 G "C1'" C N R 48 G N9 N Y N 49 G C8 C Y N 50 G N7 N Y N 51 G C5 C Y N 52 G C6 C N N 53 G O6 O N N 54 G N1 N N N 55 G C2 C N N 56 G N2 N N N 57 G N3 N N N 58 G C4 C Y N 59 G HOP3 H N N 60 G HOP2 H N N 61 G "H5'" H N N 62 G "H5''" H N N 63 G "H4'" H N N 64 G "H3'" H N N 65 G "HO3'" H N N 66 G "H2'" H N N 67 G "HO2'" H N N 68 G "H1'" H N N 69 G H8 H N N 70 G H1 H N N 71 G H21 H N N 72 G H22 H N N 73 HOH O O N N 74 HOH H1 H N N 75 HOH H2 H N N 76 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DC OP3 P sing N N 1 DC OP3 HOP3 sing N N 2 DC P OP1 doub N N 3 DC P OP2 sing N N 4 DC P "O5'" sing N N 5 DC OP2 HOP2 sing N N 6 DC "O5'" "C5'" sing N N 7 DC "C5'" "C4'" sing N N 8 DC "C5'" "H5'" sing N N 9 DC "C5'" "H5''" sing N N 10 DC "C4'" "O4'" sing N N 11 DC "C4'" "C3'" sing N N 12 DC "C4'" "H4'" sing N N 13 DC "O4'" "C1'" sing N N 14 DC "C3'" "O3'" sing N N 15 DC "C3'" "C2'" sing N N 16 DC "C3'" "H3'" sing N N 17 DC "O3'" "HO3'" sing N N 18 DC "C2'" "C1'" sing N N 19 DC "C2'" "H2'" sing N N 20 DC "C2'" "H2''" sing N N 21 DC "C1'" N1 sing N N 22 DC "C1'" "H1'" sing N N 23 DC N1 C2 sing N N 24 DC N1 C6 sing N N 25 DC C2 O2 doub N N 26 DC C2 N3 sing N N 27 DC N3 C4 doub N N 28 DC C4 N4 sing N N 29 DC C4 C5 sing N N 30 DC N4 H41 sing N N 31 DC N4 H42 sing N N 32 DC C5 C6 doub N N 33 DC C5 H5 sing N N 34 DC C6 H6 sing N N 35 G OP3 P sing N N 36 G OP3 HOP3 sing N N 37 G P OP1 doub N N 38 G P OP2 sing N N 39 G P "O5'" sing N N 40 G OP2 HOP2 sing N N 41 G "O5'" "C5'" sing N N 42 G "C5'" "C4'" sing N N 43 G "C5'" "H5'" sing N N 44 G "C5'" "H5''" sing N N 45 G "C4'" "O4'" sing N N 46 G "C4'" "C3'" sing N N 47 G "C4'" "H4'" sing N N 48 G "O4'" "C1'" sing N N 49 G "C3'" "O3'" sing N N 50 G "C3'" "C2'" sing N N 51 G "C3'" "H3'" sing N N 52 G "O3'" "HO3'" sing N N 53 G "C2'" "O2'" sing N N 54 G "C2'" "C1'" sing N N 55 G "C2'" "H2'" sing N N 56 G "O2'" "HO2'" sing N N 57 G "C1'" N9 sing N N 58 G "C1'" "H1'" sing N N 59 G N9 C8 sing Y N 60 G N9 C4 sing Y N 61 G C8 N7 doub Y N 62 G C8 H8 sing N N 63 G N7 C5 sing Y N 64 G C5 C6 sing N N 65 G C5 C4 doub Y N 66 G C6 O6 doub N N 67 G C6 N1 sing N N 68 G N1 C2 sing N N 69 G N1 H1 sing N N 70 G C2 N2 sing N N 71 G C2 N3 doub N N 72 G N2 H21 sing N N 73 G N2 H22 sing N N 74 G N3 C4 sing N N 75 HOH O H1 sing N N 76 HOH O H2 sing N N 77 # _ndb_struct_conf_na.entry_id 5EBI _ndb_struct_conf_na.feature 'z-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 B G 6 1_555 -0.218 -0.128 0.136 1.104 -2.025 0.778 1 A_DC1:G12_B A 1 ? B 12 ? 19 1 1 A G 2 1_555 B DC 5 1_555 0.281 -0.106 0.014 -4.167 0.579 1.786 2 A_G2:DC11_B A 2 ? B 11 ? 19 1 1 A DC 3 1_555 B G 4 1_555 -0.225 -0.107 0.001 3.861 -0.581 0.580 3 A_DC3:G10_B A 3 ? B 10 ? 19 1 1 A G 4 1_555 B DC 3 1_555 0.331 -0.107 0.076 -2.360 -0.447 -0.483 4 A_G4:DC9_B A 4 ? B 9 ? 19 1 1 A DC 5 1_555 B G 2 1_555 -0.333 -0.127 0.212 3.372 -0.256 -0.333 5 A_DC5:G8_B A 5 ? B 8 ? 19 1 1 A G 6 1_555 B DC 1 1_555 0.308 -0.125 0.099 -2.445 2.725 0.553 6 A_G6:DC7_B A 6 ? B 7 ? 19 1 1 C DC 1 1_555 D G 6 1_555 -0.260 -0.105 0.097 1.459 -2.276 -0.094 7 C_DC1:G12_D C 1 ? D 12 ? 19 1 1 C G 2 1_555 D DC 5 1_555 0.273 -0.075 0.016 -3.995 0.272 1.622 8 C_G2:DC11_D C 2 ? D 11 ? 19 1 1 C DC 3 1_555 D G 4 1_555 -0.257 -0.103 0.003 3.821 -0.249 0.403 9 C_DC3:G10_D C 3 ? D 10 ? 19 1 1 C G 4 1_555 D DC 3 1_555 0.379 -0.128 0.072 -2.304 -0.552 -0.141 10 C_G4:DC9_D C 4 ? D 9 ? 19 1 1 C DC 5 1_555 D G 2 1_555 -0.331 -0.116 0.233 3.415 -0.673 0.093 11 C_DC5:G8_D C 5 ? D 8 ? 19 1 1 C G 6 1_555 D DC 1 1_555 0.322 -0.114 0.062 -2.337 2.636 0.934 12 C_G6:DC7_D C 6 ? D 7 ? 19 1 1 E DC 1 1_555 F G 6 1_555 -0.322 -0.200 0.004 1.986 2.850 1.221 13 E_DC1:G12_F E 1 ? F 12 ? 19 1 1 E G 2 1_555 F DC 5 1_555 0.178 -0.124 0.037 -2.837 0.344 1.364 14 E_G2:DC11_F E 2 ? F 11 ? 19 1 1 E DC 3 1_555 F G 4 1_555 -0.250 -0.117 0.149 3.251 -0.554 1.958 15 E_DC3:G10_F E 3 ? F 10 ? 19 1 1 E G 4 1_555 F DC 3 1_555 0.265 -0.107 -0.005 -1.786 -2.989 0.753 16 E_G4:DC9_F E 4 ? F 9 ? 19 1 1 E DC 5 1_555 F G 2 1_555 -0.240 -0.156 0.068 4.302 -0.272 1.495 17 E_DC5:G8_F E 5 ? F 8 ? 19 1 1 E G 6 1_555 F DC 1 1_555 0.318 -0.158 0.162 -0.790 -2.136 2.556 18 E_G6:DC7_F E 6 ? F 7 ? 19 1 1 G DC 1 1_555 H G 6 1_555 -0.323 -0.202 0.003 2.362 3.554 1.234 19 G_DC1:G12_H G 1 ? H 12 ? 19 1 1 G G 2 1_555 H DC 5 1_555 0.220 -0.091 0.076 -2.519 0.877 1.197 20 G_G2:DC11_H G 2 ? H 11 ? 19 1 1 G DC 3 1_555 H G 4 1_555 -0.218 -0.146 0.158 3.182 0.192 2.668 21 G_DC3:G10_H G 3 ? H 10 ? 19 1 1 G G 4 1_555 H DC 3 1_555 0.251 -0.124 0.020 -1.829 -2.492 1.059 22 G_G4:DC9_H G 4 ? H 9 ? 19 1 1 G DC 5 1_555 H G 2 1_555 -0.266 -0.159 0.105 4.572 -0.152 1.267 23 G_DC5:G8_H G 5 ? H 8 ? 19 1 1 G G 6 1_555 H DC 1 1_555 0.274 -0.161 0.164 -0.410 -1.563 2.370 24 G_G6:DC7_H G 6 ? H 7 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 B G 6 1_555 A G 2 1_555 B DC 5 1_555 0.132 5.420 3.625 1.052 -1.833 -8.960 -28.613 3.781 4.591 11.526 6.612 -9.205 1 AA_DC1G2:DC11G12_BB A 1 ? B 12 ? A 2 ? B 11 ? 1 A G 2 1_555 B DC 5 1_555 A DC 3 1_555 B G 4 1_555 0.119 -1.148 3.244 -0.426 -5.152 -51.862 1.641 0.108 3.126 5.874 -0.485 -52.102 2 AA_G2DC3:G10DC11_BB A 2 ? B 11 ? A 3 ? B 10 ? 1 A DC 3 1_555 B G 4 1_555 A G 4 1_555 B DC 3 1_555 0.025 5.357 3.576 -0.538 -1.402 -8.686 -30.718 -1.426 4.376 9.166 -3.514 -8.815 3 AA_DC3G4:DC9G10_BB A 3 ? B 10 ? A 4 ? B 9 ? 1 A G 4 1_555 B DC 3 1_555 A DC 5 1_555 B G 2 1_555 -0.169 -1.114 3.269 -0.465 -5.931 -51.627 1.661 -0.223 3.130 6.784 -0.532 -51.945 4 AA_G4DC5:G8DC9_BB A 4 ? B 9 ? A 5 ? B 8 ? 1 A DC 5 1_555 B G 2 1_555 A G 6 1_555 B DC 1 1_555 0.094 5.281 3.698 0.812 0.284 -7.523 -41.005 3.626 3.466 -2.154 6.165 -7.572 5 AA_DC5G6:DC7G8_BB A 5 ? B 8 ? A 6 ? B 7 ? 1 C DC 1 1_555 D G 6 1_555 C G 2 1_555 D DC 5 1_555 0.137 5.424 3.614 0.646 -1.874 -8.653 -29.345 2.847 4.655 12.207 4.206 -8.877 6 CC_DC1G2:DC11G12_DD C 1 ? D 12 ? C 2 ? D 11 ? 1 C G 2 1_555 D DC 5 1_555 C DC 3 1_555 D G 4 1_555 0.112 -1.141 3.248 -0.349 -5.147 -51.830 1.635 0.105 3.129 5.872 -0.398 -52.069 7 CC_G2DC3:G10DC11_DD C 2 ? D 11 ? C 3 ? D 10 ? 1 C DC 3 1_555 D G 4 1_555 C G 4 1_555 D DC 3 1_555 0.059 5.355 3.575 -0.486 -1.590 -8.236 -31.278 -1.209 4.519 10.923 -3.338 -8.402 8 CC_DC3G4:DC9G10_DD C 3 ? D 10 ? C 4 ? D 9 ? 1 C G 4 1_555 D DC 3 1_555 C DC 5 1_555 D G 2 1_555 -0.148 -1.111 3.271 -0.843 -5.777 -52.127 1.630 -0.222 3.137 6.550 -0.956 -52.430 9 CC_G4DC5:G8DC9_DD C 4 ? D 9 ? C 5 ? D 8 ? 1 C DC 5 1_555 D G 2 1_555 C G 6 1_555 D DC 1 1_555 0.097 5.298 3.696 1.369 0.456 -7.208 -43.024 5.865 3.278 -3.578 10.748 -7.351 10 CC_DC5G6:DC7G8_DD C 5 ? D 8 ? C 6 ? D 7 ? 1 E DC 1 1_555 F G 6 1_555 E G 2 1_555 F DC 5 1_555 -0.114 5.403 3.561 -0.595 0.077 -8.460 -36.753 -2.446 3.495 -0.524 -4.028 -8.481 11 EE_DC1G2:DC11G12_FF E 1 ? F 12 ? E 2 ? F 11 ? 1 E G 2 1_555 F DC 5 1_555 E DC 3 1_555 F G 4 1_555 0.051 -1.124 3.251 -0.605 -4.457 -52.190 1.561 0.018 3.152 5.056 -0.686 -52.370 12 EE_G2DC3:G10DC11_FF E 2 ? F 11 ? E 3 ? F 10 ? 1 E DC 3 1_555 F G 4 1_555 E G 4 1_555 F DC 3 1_555 -0.062 5.369 3.610 1.781 -3.511 -8.220 -22.412 5.384 5.334 22.847 11.592 -9.113 13 EE_DC3G4:DC9G10_FF E 3 ? F 10 ? E 4 ? F 9 ? 1 E G 4 1_555 F DC 3 1_555 E DC 5 1_555 F G 2 1_555 -0.151 -1.114 3.255 -0.235 -6.213 -51.222 1.693 -0.190 3.108 7.156 -0.270 -51.573 14 EE_G4DC5:G8DC9_FF E 4 ? F 9 ? E 5 ? F 8 ? 1 E DC 5 1_555 F G 2 1_555 E G 6 1_555 F DC 1 1_555 0.023 5.368 3.666 -1.298 -0.272 -8.679 -34.308 -3.464 3.794 1.787 -8.510 -8.779 15 EE_DC5G6:DC7G8_FF E 5 ? F 8 ? E 6 ? F 7 ? 1 G DC 1 1_555 H G 6 1_555 G G 2 1_555 H DC 5 1_555 -0.125 5.399 3.577 -0.818 0.455 -8.501 -37.423 -3.031 3.257 -3.059 -5.494 -8.553 16 GG_DC1G2:DC11G12_HH G 1 ? H 12 ? G 2 ? H 11 ? 1 G G 2 1_555 H DC 5 1_555 G DC 3 1_555 H G 4 1_555 0.083 -1.138 3.249 -0.287 -5.022 -52.046 1.616 0.075 3.135 5.707 -0.326 -52.272 17 GG_G2DC3:G10DC11_HH G 2 ? H 11 ? G 3 ? H 10 ? 1 G DC 3 1_555 H G 4 1_555 G G 4 1_555 H DC 3 1_555 -0.068 5.367 3.603 1.485 -3.104 -8.659 -23.761 4.019 5.145 19.572 9.363 -9.317 18 GG_DC3G4:DC9G10_HH G 3 ? H 10 ? G 4 ? H 9 ? 1 G G 4 1_555 H DC 3 1_555 G DC 5 1_555 H G 2 1_555 -0.168 -1.114 3.257 -0.274 -6.065 -51.208 1.684 -0.211 3.114 6.989 -0.316 -51.543 19 GG_G4DC5:G8DC9_HH G 4 ? H 9 ? G 5 ? H 8 ? 1 G DC 5 1_555 H G 2 1_555 G G 6 1_555 H DC 1 1_555 -0.007 5.366 3.663 -0.964 -0.173 -8.605 -35.043 -2.780 3.746 1.146 -6.396 -8.660 20 GG_DC5G6:DC7G8_HH G 5 ? H 8 ? G 6 ? H 7 ? # _pdbx_audit_support.funding_organization 'National Science Center' _pdbx_audit_support.country Poland _pdbx_audit_support.grant_number 2013/10/M/NZ1/00251 _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3P4J _pdbx_initial_refinement_model.details ? # loop_ _pdbx_reflns_twin.domain_id _pdbx_reflns_twin.crystal_id _pdbx_reflns_twin.diffrn_id _pdbx_reflns_twin.type _pdbx_reflns_twin.operator _pdbx_reflns_twin.fraction 1 1 1 ? 'H, K, L' 0.279 2 1 1 ? 'L, -K, H' 0.103 3 1 1 ? 'H+L, -K, -L' 0.275 4 1 1 ? 'L, K, -H-L' 0.113 5 1 1 ? '-H-L, K, H' 0.110 6 1 1 ? '-H, -K, H+L' 0.121 # _pdbx_related_exp_data_set.ordinal 1 _pdbx_related_exp_data_set.data_reference 10.18150/9887707 _pdbx_related_exp_data_set.metadata_reference ? _pdbx_related_exp_data_set.data_set_type 'diffraction image data' _pdbx_related_exp_data_set.details ? # _atom_sites.entry_id 5EBI _atom_sites.fract_transf_matrix[1][1] 0.027996 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.016151 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022676 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.032321 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol BA C N O P # loop_